locus-tag	class	description
NMB96_RS00035	COG0583	DNA-binding transcription factor activity
NMB96_RS00075	COG2003	Belongs to the UPF0758 family
NMB96_RS00145	COG0784	Response regulator, receiver
NMB96_RS00145	COG4191	Histidine kinase
NMB96_RS00160	COG1484	DNA-dependent DNA replication
NMB96_RS00165	COG4584	PFAM Integrase catalytic
NMB96_RS00230	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NMB96_RS00235	COG3273	potassium ion transport
NMB96_RS00235	COG0471	metal ion transport
NMB96_RS00265	COG1609	Transcriptional regulator
NMB96_RS00275	COG3250	beta-galactosidase activity
NMB96_RS00280	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS00290	COG2272	Belongs to the type-B carboxylesterase lipase family
NMB96_RS00295	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMB96_RS00315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMB96_RS00320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS00325	COG2895	sulfate adenylyltransferase (ATP) activity
NMB96_RS00325	COG0529	Catalyzes the synthesis of activated sulfate
NMB96_RS00335	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NMB96_RS00340	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NMB96_RS00345	COG0175	sulfate reduction
NMB96_RS00365	COG2198	Histidine kinase
NMB96_RS00365	COG2205	protein histidine kinase activity
NMB96_RS00365	COG0784	Response regulator, receiver
NMB96_RS00395	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
NMB96_RS00400	COG3588	fructose-bisphosphate aldolase
NMB96_RS00405	COG0469	pyruvate kinase activity
NMB96_RS00435	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NMB96_RS00450	COG3047	cAMP biosynthetic process
NMB96_RS00460	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NMB96_RS00460	COG3453	Protein conserved in bacteria
NMB96_RS00465	COG0725	ABC transporter, periplasmic molybdate-binding protein
NMB96_RS00470	COG4149	molybdate abc transporter
NMB96_RS00475	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
NMB96_RS00510	COG1376	ErfK ybiS ycfS ynhG family protein
NMB96_RS00525	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS00530	COG0583	DNA-binding transcription factor activity
NMB96_RS00535	COG4773	Receptor
NMB96_RS00540	COG0596	Alpha beta hydrolase
NMB96_RS00550	COG1301	dicarboxylic acid transport
NMB96_RS00580	COG0714	Associated with various cellular activities
NMB96_RS00610	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NMB96_RS00635	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NMB96_RS00645	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NMB96_RS00660	COG1561	YicC-like family, N-terminal region
NMB96_RS00665	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NMB96_RS00670	COG0346	lactoylglutathione lyase activity
NMB96_RS00680	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NMB96_RS00695	COG0006	proline dipeptidase activity
NMB96_RS00705	COG0006	proline dipeptidase activity
NMB96_RS00730	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NMB96_RS00750	COG2912	Transglutaminase-like superfamily
NMB96_RS00755	COG1773	rubredoxin
NMB96_RS00760	COG0352	thiamine-phosphate diphosphorylase activity
NMB96_RS00770	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NMB96_RS00780	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
NMB96_RS00785	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMB96_RS00815	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NMB96_RS00820	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMB96_RS00835	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS00845	COG0671	phosphoesterase, PA-phosphatase related
NMB96_RS00850	COG3781	membrane
NMB96_RS00860	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NMB96_RS00865	COG0563	adenylate kinase activity
NMB96_RS00880	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
NMB96_RS00890	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NMB96_RS00910	COG3710	Transcriptional regulator
NMB96_RS00915	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NMB96_RS00930	COG4946	Tricorn protease homolog
NMB96_RS00930	COG1506	peptidase
NMB96_RS00930	COG0823	Involved in the tonB-independent uptake of proteins
NMB96_RS00935	COG0840	transmembrane signaling receptor activity
NMB96_RS00940	COG0405	Gamma-glutamyltransferase
NMB96_RS00950	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NMB96_RS00970	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NMB96_RS00975	COG0473	3-isopropylmalate dehydrogenase activity
NMB96_RS00980	COG2226	methyltransferase
NMB96_RS00985	COG0066	3-isopropylmalate dehydratase activity
NMB96_RS00990	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NMB96_RS01010	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NMB96_RS01015	COG1538	Outer membrane efflux protein
NMB96_RS01025	COG1519	Transferase
NMB96_RS01030	COG1560	Kdo2-lipid A biosynthetic process
NMB96_RS01055	COG0281	malic enzyme
NMB96_RS01055	COG0280	phosphate acetyltransferase
NMB96_RS01070	COG4191	Histidine kinase
NMB96_RS01090	COG0583	DNA-binding transcription factor activity
NMB96_RS01100	COG2197	response regulator
NMB96_RS01160	COG0642	Histidine kinase
NMB96_RS01175	COG2851	Citrate transporter
NMB96_RS01180	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS01185	COG1609	Transcriptional regulator
NMB96_RS01190	COG2211	Major facilitator Superfamily
NMB96_RS01230	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
NMB96_RS01295	COG0436	Aminotransferase
NMB96_RS01320	COG4773	Receptor
NMB96_RS01325	COG0726	polysaccharide deacetylase
NMB96_RS01330	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NMB96_RS01345	COG1228	amidohydrolase
NMB96_RS01375	COG1307	EDD domain protein, DegV family
NMB96_RS01385	COG0697	spore germination
NMB96_RS01395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NMB96_RS01405	COG3791	Glutathione-dependent formaldehyde-activating
NMB96_RS01420	COG3920	Histidine kinase
NMB96_RS01450	COG2205	protein histidine kinase activity
NMB96_RS01465	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NMB96_RS01470	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NMB96_RS01485	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NMB96_RS01495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NMB96_RS01505	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NMB96_RS01525	COG0617	tRNA 3'-terminal CCA addition
NMB96_RS01540	COG1132	(ABC) transporter
NMB96_RS01550	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NMB96_RS01555	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NMB96_RS01560	COG1609	Transcriptional regulator
NMB96_RS01570	COG2188	Transcriptional regulator
NMB96_RS01585	COG3250	beta-galactosidase activity
NMB96_RS01610	COG3156	type II secretion system protein K
NMB96_RS01635	COG1459	type II secretion system
NMB96_RS01680	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS01685	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NMB96_RS01690	COG4191	Histidine kinase
NMB96_RS01695	COG0784	Response regulator, receiver
NMB96_RS01700	COG4251	negative regulation of phosphorylation
NMB96_RS01705	COG2823	Periplasmic or secreted lipoprotein
NMB96_RS01710	COG0673	inositol 2-dehydrogenase activity
NMB96_RS01715	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NMB96_RS01750	COG1051	belongs to the nudix hydrolase family
NMB96_RS01750	COG1056	cytidyltransferase-related domain
NMB96_RS01765	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NMB96_RS01770	COG0321	lipoyl(octanoyl) transferase activity
NMB96_RS01775	COG2921	Belongs to the UPF0250 family
NMB96_RS01785	COG1686	Belongs to the peptidase S11 family
NMB96_RS01790	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NMB96_RS01795	COG2951	lytic endotransglycosylase activity
NMB96_RS01830	COG0772	Belongs to the SEDS family
NMB96_RS01840	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NMB96_RS01845	COG1792	Involved in formation and maintenance of cell shape
NMB96_RS01850	COG1077	Cell shape determining protein MreB Mrl
NMB96_RS01855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMB96_RS01860	COG3284	Transcriptional regulator
NMB96_RS01890	COG0028	Belongs to the TPP enzyme family
NMB96_RS01890	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
NMB96_RS01900	COG1213	nucleotidyl transferase
NMB96_RS01905	COG0367	asparagine synthase
NMB96_RS01910	COG1012	belongs to the aldehyde dehydrogenase family
NMB96_RS01915	COG0730	response to heat
NMB96_RS01935	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
NMB96_RS01970	COG0308	aminopeptidase N
NMB96_RS01975	COG3300	MHYT domain
NMB96_RS01975	COG5001	Diguanylate cyclase
NMB96_RS01980	COG2226	methyltransferase
NMB96_RS02005	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NMB96_RS02010	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NMB96_RS02015	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NMB96_RS02030	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NMB96_RS02040	COG2832	Protein of unknown function (DUF454)
NMB96_RS02050	COG0436	Aminotransferase
NMB96_RS02060	COG1505	serine-type exopeptidase activity
NMB96_RS02085	COG0181	hydroxymethylbilane synthase activity
NMB96_RS02095	COG3275	phosphorelay sensor kinase activity
NMB96_RS02125	COG0659	secondary active sulfate transmembrane transporter activity
NMB96_RS02130	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS02130	COG5297	Belongs to the glycosyl hydrolase family 6
NMB96_RS02135	COG0840	transmembrane signaling receptor activity
NMB96_RS02180	COG3507	Belongs to the glycosyl hydrolase 43 family
NMB96_RS02195	COG1113	amino acid transport
NMB96_RS02200	COG4305	rare lipoprotein A
NMB96_RS02215	COG0697	spore germination
NMB96_RS02250	COG0823	Involved in the tonB-independent uptake of proteins
NMB96_RS02250	COG1506	peptidase
NMB96_RS02285	COG0435	Glutathione S-transferase
NMB96_RS02330	COG0823	Involved in the tonB-independent uptake of proteins
NMB96_RS02330	COG1506	peptidase
NMB96_RS02335	COG4206	TonB-dependent receptor
NMB96_RS02505	COG1802	Transcriptional regulator
NMB96_RS02540	COG3052	prosthetic group binding
NMB96_RS02565	COG2353	YceI-like domain
NMB96_RS02590	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NMB96_RS02625	COG3712	iron ion homeostasis
NMB96_RS02650	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NMB96_RS02675	COG2356	endonuclease I
NMB96_RS02680	COG1324	tolerance protein
NMB96_RS02700	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NMB96_RS02705	COG0511	ligase activity, forming carbon-carbon bonds
NMB96_RS02710	COG0439	Biotin carboxylase
NMB96_RS02725	COG2264	protein methyltransferase activity
NMB96_RS02745	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NMB96_RS02760	COG0138	bifunctional purine biosynthesis protein purh
NMB96_RS02765	COG0151	Belongs to the GarS family
NMB96_RS02770	COG1289	transmembrane transporter activity
NMB96_RS02775	COG2814	Major facilitator Superfamily
NMB96_RS02800	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NMB96_RS02815	COG0316	Belongs to the HesB IscA family
NMB96_RS02880	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
NMB96_RS02895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMB96_RS02905	COG0134	indole-3-glycerol-phosphate synthase activity
NMB96_RS02910	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NMB96_RS03015	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NMB96_RS03115	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NMB96_RS03120	COG0625	glutathione transferase activity
NMB96_RS03130	COG0583	DNA-binding transcription factor activity
NMB96_RS03135	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
NMB96_RS03150	COG0655	NAD(P)H dehydrogenase (quinone) activity
NMB96_RS03155	COG0583	DNA-binding transcription factor activity
NMB96_RS03160	COG0583	DNA-binding transcription factor activity
NMB96_RS03180	COG1597	lipid kinase activity
NMB96_RS03200	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NMB96_RS03225	COG3179	chitinase
NMB96_RS03245	COG2111	Na H antiporter
NMB96_RS03245	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NMB96_RS03250	COG1006	Multisubunit Na H antiporter MnhC subunit
NMB96_RS03255	COG0651	ATP synthesis coupled electron transport
NMB96_RS03265	COG2212	antiporter activity
NMB96_RS03270	COG1320	monovalent cation:proton antiporter activity
NMB96_RS03290	COG2852	Protein conserved in bacteria
NMB96_RS03310	COG3104	oligopeptide transport
NMB96_RS03325	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NMB96_RS03340	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMB96_RS03345	COG0513	Belongs to the DEAD box helicase family
NMB96_RS03355	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMB96_RS03400	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS03405	COG0702	epimerase
NMB96_RS03430	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NMB96_RS03435	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NMB96_RS03440	COG0297	glycogen (starch) synthase activity
NMB96_RS03450	COG1649	PFAM Uncharacterised BCR, COG1649
NMB96_RS03455	COG2354	Protein conserved in bacteria
NMB96_RS03460	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NMB96_RS03465	COG1368	sulfuric ester hydrolase activity
NMB96_RS03475	COG1511	domain protein
NMB96_RS03475	COG3264	Mechanosensitive ion channel
NMB96_RS03495	COG3590	peptidase
NMB96_RS03505	COG0582	viral genome integration into host DNA
NMB96_RS03510	COG0582	viral genome integration into host DNA
NMB96_RS03525	COG1040	competence protein
NMB96_RS03530	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NMB96_RS03535	COG0156	8-amino-7-oxononanoate synthase activity
NMB96_RS03580	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NMB96_RS03600	COG0657	acetylesterase activity
NMB96_RS03610	COG1414	Transcriptional regulator
NMB96_RS03620	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NMB96_RS03625	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NMB96_RS03630	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NMB96_RS03635	COG3485	protocatechuate 3,4-dioxygenase
NMB96_RS03640	COG3485	protocatechuate 3,4-dioxygenase
NMB96_RS03645	COG0183	Belongs to the thiolase family
NMB96_RS03650	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NMB96_RS03655	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NMB96_RS03690	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NMB96_RS03695	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NMB96_RS03745	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NMB96_RS03755	COG0129	dihydroxy-acid dehydratase activity
NMB96_RS03780	COG0270	DNA (cytosine-5-)-methyltransferase activity
NMB96_RS03785	COG0270	DNA (cytosine-5-)-methyltransferase activity
NMB96_RS03860	COG0840	transmembrane signaling receptor activity
NMB96_RS03870	COG1733	regulation of RNA biosynthetic process
NMB96_RS03875	COG0702	epimerase
NMB96_RS03900	COG0583	DNA-binding transcription factor activity
NMB96_RS03905	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NMB96_RS03925	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS03930	COG2205	protein histidine kinase activity
NMB96_RS03935	COG0745	RESPONSE REGULATOR receiver
NMB96_RS03940	COG2223	nitrite transmembrane transporter activity
NMB96_RS03960	COG1902	pentaerythritol trinitrate reductase activity
NMB96_RS03965	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NMB96_RS04000	COG2814	Major facilitator Superfamily
NMB96_RS04005	COG0583	DNA-binding transcription factor activity
NMB96_RS04020	COG0084	hydrolase, TatD family'
NMB96_RS04040	COG2252	PERMEase
NMB96_RS04050	COG1957	nucleoside hydrolase
NMB96_RS04165	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NMB96_RS04185	COG2072	flavoprotein involved in K transport
NMB96_RS04190	COG2351	hydroxyisourate hydrolase activity
NMB96_RS04195	COG4807	Protein conserved in bacteria
NMB96_RS04200	COG0840	transmembrane signaling receptor activity
NMB96_RS04205	COG1643	Atp-dependent helicase
NMB96_RS04215	COG1187	pseudouridine synthase activity
NMB96_RS04230	COG2130	NADP-dependent
NMB96_RS04235	COG0656	L-ascorbic acid biosynthetic process
NMB96_RS04260	COG1764	response to oxidative stress
NMB96_RS04265	COG1846	Transcriptional regulator
NMB96_RS04275	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NMB96_RS04285	COG0697	spore germination
NMB96_RS04300	COG0523	cobalamin synthesis protein
NMB96_RS04355	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS04360	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NMB96_RS04365	COG4770	biotin carboxylase activity
NMB96_RS04395	COG2224	Isocitrate lyase
NMB96_RS04400	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NMB96_RS04405	COG0583	DNA-binding transcription factor activity
NMB96_RS04410	COG0475	glutathione-regulated potassium exporter activity
NMB96_RS04440	COG0339	signal peptide processing
NMB96_RS04445	COG1446	asparaginase
NMB96_RS04490	COG1181	Belongs to the D-alanine--D-alanine ligase family
NMB96_RS04505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMB96_RS04520	COG0318	PFAM AMP-dependent synthetase and ligase
NMB96_RS04525	COG0727	PFAM Uncharacterised protein family (UPF0153)
NMB96_RS04530	COG0596	Alpha beta hydrolase
NMB96_RS04535	COG3177	Filamentation induced by cAMP protein fic
NMB96_RS04540	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMB96_RS04555	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NMB96_RS04585	COG4191	Histidine kinase
NMB96_RS04590	COG0028	Belongs to the TPP enzyme family
NMB96_RS04600	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NMB96_RS04610	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMB96_RS04645	COG0183	Belongs to the thiolase family
NMB96_RS04655	COG2032	superoxide dismutase activity
NMB96_RS04660	COG2032	superoxide dismutase activity
NMB96_RS04665	COG2204	response regulator
NMB96_RS04670	COG3852	Histidine kinase
NMB96_RS04675	COG0004	ammonium transporteR
NMB96_RS04680	COG0347	Belongs to the P(II) protein family
NMB96_RS04685	COG0174	glutamine synthetase
NMB96_RS04700	COG1881	PFAM PEBP family protein
NMB96_RS04730	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMB96_RS04740	COG2062	phosphohistidine phosphatase, SixA
NMB96_RS04745	COG0489	protein tyrosine kinase activity
NMB96_RS04765	COG1396	sequence-specific DNA binding
NMB96_RS04770	COG3550	peptidyl-serine autophosphorylation
NMB96_RS04780	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NMB96_RS04795	COG0517	IMP dehydrogenase activity
NMB96_RS04795	COG1125	glycine betaine transport
NMB96_RS04810	COG1119	ATPase activity
NMB96_RS04815	COG1752	Esterase of the alpha-beta hydrolase superfamily
NMB96_RS04825	COG1522	sequence-specific DNA binding
NMB96_RS04830	COG3186	Phenylalanine-4-hydroxylase
NMB96_RS04855	COG2755	lipolytic protein G-D-S-L family
NMB96_RS04870	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS04875	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
NMB96_RS04880	COG1609	Transcriptional regulator
NMB96_RS04885	COG3507	Belongs to the glycosyl hydrolase 43 family
NMB96_RS04900	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
NMB96_RS04910	COG0657	acetylesterase activity
NMB96_RS04910	COG2755	lipolytic protein G-D-S-L family
NMB96_RS04920	COG2755	lipolytic protein G-D-S-L family
NMB96_RS04965	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NMB96_RS04970	COG0366	Alpha amylase catalytic
NMB96_RS04975	COG0366	Alpha amylase catalytic
NMB96_RS05110	COG4771	TonB-dependent receptor
NMB96_RS05125	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NMB96_RS05130	COG3710	Transcriptional regulator
NMB96_RS05145	COG2197	response regulator
NMB96_RS05150	COG4585	Histidine kinase
NMB96_RS05155	COG1755	Isoprenylcysteine carboxyl methyltransferase
NMB96_RS05210	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS05215	COG1012	belongs to the aldehyde dehydrogenase family
NMB96_RS05230	COG0662	Cupin 2, conserved barrel domain protein
NMB96_RS05240	COG4772	TonB-dependent receptor
NMB96_RS05250	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
NMB96_RS05300	COG0714	Associated with various cellular activities
NMB96_RS05345	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NMB96_RS05355	COG0657	acetylesterase activity
NMB96_RS05395	COG3237	CsbD-like
NMB96_RS05405	COG3275	phosphorelay sensor kinase activity
NMB96_RS05410	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NMB96_RS05520	COG1733	regulation of RNA biosynthetic process
NMB96_RS05530	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS05535	COG0583	DNA-binding transcription factor activity
NMB96_RS05560	COG1272	protein, Hemolysin III
NMB96_RS05565	COG1205	dead DEAH box helicase
NMB96_RS05565	COG1111	helicase
NMB96_RS05630	COG1484	DNA-dependent DNA replication
NMB96_RS05635	COG4584	PFAM Integrase catalytic
NMB96_RS05735	COG3459	Glycosyltransferase 36 associated
NMB96_RS05750	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NMB96_RS05755	COG1741	Belongs to the pirin family
NMB96_RS05795	COG0067	glutamate synthase
NMB96_RS05795	COG0069	glutamate synthase activity
NMB96_RS05795	COG0070	glutamate synthase
NMB96_RS05800	COG0493	'glutamate synthase
NMB96_RS05810	COG1064	alcohol dehydrogenase
NMB96_RS05815	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS05820	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS05825	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS05830	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS05845	COG2234	aminopeptidase activity
NMB96_RS05855	COG4942	peptidase
NMB96_RS05860	COG0793	Belongs to the peptidase S41A family
NMB96_RS05865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMB96_RS05895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMB96_RS05905	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NMB96_RS05940	COG0501	Belongs to the peptidase M48B family
NMB96_RS05950	COG0187	DNA topoisomerase II activity
NMB96_RS05980	COG0706	membrane insertase activity
NMB96_RS06005	COG0584	glycerophosphoryl diester phosphodiesterase
NMB96_RS06015	COG0861	Integral membrane protein TerC family
NMB96_RS06020	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NMB96_RS06065	COG2271	Major facilitator Superfamily
NMB96_RS06070	COG1929	Belongs to the glycerate kinase type-1 family
NMB96_RS06075	COG3835	regulator
NMB96_RS06080	COG2199	diguanylate cyclase activity
NMB96_RS06080	COG2203	Gaf domain
NMB96_RS06090	COG3537	Alpha-1,2-mannosidase
NMB96_RS06095	COG0531	amino acid
NMB96_RS06100	COG0625	glutathione transferase activity
NMB96_RS06105	COG1322	Protein conserved in bacteria
NMB96_RS06115	COG0386	Belongs to the glutathione peroxidase family
NMB96_RS06135	COG2853	Lipoprotein
NMB96_RS06150	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NMB96_RS06155	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NMB96_RS06160	COG1127	ABC transporter
NMB96_RS06195	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NMB96_RS06200	COG1074	ATP-dependent DNA helicase activity
NMB96_RS06205	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NMB96_RS06290	COG3039	Transposase
NMB96_RS06295	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NMB96_RS06325	COG3039	Transposase
NMB96_RS06340	COG3549	Plasmid maintenance system killer
NMB96_RS06490	COG1487	ribonuclease activity
NMB96_RS06495	COG4691	Plasmid stability protein
NMB96_RS06515	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMB96_RS06530	COG4221	oxidoreductase activity
NMB96_RS06540	COG0477	Major facilitator Superfamily
NMB96_RS06545	COG1289	transmembrane transporter activity
NMB96_RS06555	COG1566	PFAM secretion protein HlyD family protein
NMB96_RS06570	COG0302	gtp cyclohydrolase
NMB96_RS06595	COG0730	response to heat
NMB96_RS06610	COG0676	glucose-6-phosphate 1-epimerase activity
NMB96_RS06630	COG3135	benzoate transporter
NMB96_RS06660	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NMB96_RS06670	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
NMB96_RS06680	COG1435	thymidine kinase activity
NMB96_RS06685	COG0210	DNA helicase
NMB96_RS06705	COG3132	Protein of unknown function, DUF480
NMB96_RS06710	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
NMB96_RS06715	COG0284	orotidine-5'-phosphate decarboxylase activity
NMB96_RS06745	COG2937	Belongs to the GPAT DAPAT family
NMB96_RS06810	COG2211	Major facilitator Superfamily
NMB96_RS06825	COG3693	PFAM glycoside hydrolase, family 10
NMB96_RS06830	COG1904	glucuronate isomerase
NMB96_RS06835	COG3250	beta-galactosidase activity
NMB96_RS06845	COG3386	PFAM SMP-30 Gluconolaconase
NMB96_RS06860	COG1620	l-lactate permease
NMB96_RS06865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMB96_RS06895	COG0246	Mannitol dehydrogenase
NMB96_RS06900	COG1472	Belongs to the glycosyl hydrolase 3 family
NMB96_RS06910	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS06920	COG3661	Belongs to the glycosyl hydrolase 67 family
NMB96_RS06930	COG2115	Belongs to the xylose isomerase family
NMB96_RS06935	COG0037	tRNA processing
NMB96_RS06940	COG2974	May be involved in recombination
NMB96_RS06955	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NMB96_RS06965	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NMB96_RS06970	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NMB96_RS06975	COG0805	protein transport
NMB96_RS06985	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NMB96_RS06985	COG0519	Catalyzes the synthesis of GMP from XMP
NMB96_RS06995	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NMB96_RS07010	COG0457	Tetratricopeptide repeat
NMB96_RS07015	COG4771	TonB-dependent receptor
NMB96_RS07020	COG0729	surface antigen
NMB96_RS07025	COG2911	Protein conserved in bacteria
NMB96_RS07045	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NMB96_RS07050	COG3265	gluconokinase activity
NMB96_RS07055	COG2211	Major facilitator Superfamily
NMB96_RS07060	COG3459	Glycosyltransferase 36 associated
NMB96_RS07065	COG2205	protein histidine kinase activity
NMB96_RS07070	COG1971	Probably functions as a manganese efflux pump
NMB96_RS07085	COG1414	Transcriptional regulator
NMB96_RS07090	COG0738	Major facilitator superfamily
NMB96_RS07095	COG3254	rhamnose metabolic process
NMB96_RS07100	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS07105	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMB96_RS07110	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS07160	COG3162	membrane
NMB96_RS07165	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NMB96_RS07185	COG1940	carbohydrate kinase activity
NMB96_RS07200	COG0708	Exodeoxyribonuclease III
NMB96_RS07215	COG2091	lysine biosynthetic process via aminoadipic acid
NMB96_RS07275	COG3540	Alkaline phosphatase
NMB96_RS07300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS07325	COG2159	amidohydrolase
NMB96_RS07335	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NMB96_RS07345	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMB96_RS07360	COG0210	DNA helicase
NMB96_RS07380	COG3621	Patatin-like phospholipase
NMB96_RS07480	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMB96_RS07525	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS07540	COG0463	Glycosyl transferase, family 2
NMB96_RS07550	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NMB96_RS07555	COG3100	YcgL domain-containing protein
NMB96_RS07565	COG3387	PFAM Glycoside hydrolase 15-related
NMB96_RS07570	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NMB96_RS07580	COG2239	Acts as a magnesium transporter
NMB96_RS07585	COG1629	transport
NMB96_RS07585	COG4771	TonB-dependent receptor
NMB96_RS07600	COG1042	CoA-binding domain protein
NMB96_RS07600	COG0045	succinate-CoA ligase (ADP-forming) activity
NMB96_RS07600	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NMB96_RS07610	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMB96_RS07615	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMB96_RS07630	COG1607	acyl-coa hydrolase
NMB96_RS07645	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NMB96_RS07655	COG0842	Transport permease protein
NMB96_RS07660	COG1131	(ABC) transporter
NMB96_RS07705	COG1476	TRANSCRIPTIONal
NMB96_RS07710	COG0596	Alpha beta hydrolase
NMB96_RS07715	COG4555	ABC transporter
NMB96_RS07750	COG0625	glutathione transferase activity
NMB96_RS07790	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NMB96_RS07815	COG1199	ATP-dependent helicase activity
NMB96_RS07860	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NMB96_RS07890	COG3228	Belongs to the MtfA family
NMB96_RS07900	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
NMB96_RS07900	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
NMB96_RS07905	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NMB96_RS07920	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NMB96_RS07960	COG3237	CsbD-like
NMB96_RS07965	COG0180	Tryptophanyl-tRNA synthetase
NMB96_RS07990	COG0697	spore germination
NMB96_RS08015	COG1136	(ABC) transporter
NMB96_RS08020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS08030	COG2197	response regulator
NMB96_RS08050	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NMB96_RS08055	COG1011	Hydrolase
NMB96_RS08080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NMB96_RS08100	COG0642	Histidine kinase
NMB96_RS08110	COG1090	epimerase
NMB96_RS08165	COG4943	cyclic-guanylate-specific phosphodiesterase activity
NMB96_RS08180	COG0606	chelatase, subunit chli
NMB96_RS08220	COG1166	arginine decarboxylase activity
NMB96_RS08225	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NMB96_RS08235	COG2755	lipolytic protein G-D-S-L family
NMB96_RS08235	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NMB96_RS08240	COG4221	oxidoreductase activity
NMB96_RS08250	COG0018	arginyl-trna synthetase
NMB96_RS08260	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NMB96_RS08265	COG0756	dUTP diphosphatase activity
NMB96_RS08285	COG0463	Glycosyl transferase, family 2
NMB96_RS08300	COG1475	DNA binding
NMB96_RS08305	COG1192	Involved in chromosome partitioning
NMB96_RS08320	COG0708	Exodeoxyribonuclease III
NMB96_RS08325	COG2211	Major facilitator Superfamily
NMB96_RS08340	COG0739	heme binding
NMB96_RS08385	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NMB96_RS08400	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
NMB96_RS08430	COG0109	protoheme IX farnesyltransferase activity
NMB96_RS08445	COG0358	DNA primase activity
NMB96_RS08450	COG1295	ribonuclease BN
NMB96_RS08455	COG1610	YqeY-like protein
NMB96_RS08470	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NMB96_RS08485	COG2133	pyrroloquinoline quinone binding
NMB96_RS08490	COG4682	membrane
NMB96_RS08505	COG0531	amino acid
NMB96_RS08515	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS08525	COG3023	N-Acetylmuramoyl-L-alanine amidase
NMB96_RS08530	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
NMB96_RS08565	COG5383	Protein conserved in bacteria
NMB96_RS08575	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMB96_RS08580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS08585	COG1473	amidohydrolase
NMB96_RS08590	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NMB96_RS08590	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NMB96_RS08610	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
NMB96_RS08645	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NMB96_RS08650	COG3118	belongs to the thioredoxin family
NMB96_RS08660	COG2884	Cell division ATP-binding protein ftsE
NMB96_RS08665	COG2177	Part of the ABC transporter FtsEX involved in
NMB96_RS08670	COG2201	protein-glutamate methylesterase activity
NMB96_RS08675	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NMB96_RS08680	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NMB96_RS08685	COG2860	membrane
NMB96_RS08690	COG1252	NADH dehydrogenase
NMB96_RS08705	COG0625	glutathione transferase activity
NMB96_RS08710	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NMB96_RS08725	COG0534	Mate efflux family protein
NMB96_RS08730	COG0616	signal peptide processing
NMB96_RS08740	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS08755	COG0009	L-threonylcarbamoyladenylate synthase
NMB96_RS08760	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NMB96_RS08760	COG1754	DNA topoisomerase type I activity
NMB96_RS08780	COG0758	DNA mediated transformation
NMB96_RS08785	COG1652	LysM domain
NMB96_RS08790	COG0242	peptide deformylase activity
NMB96_RS08795	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NMB96_RS08800	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NMB96_RS08800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NMB96_RS08835	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NMB96_RS08845	COG1560	Kdo2-lipid A biosynthetic process
NMB96_RS08850	COG1490	D-aminoacyl-tRNA deacylase activity
NMB96_RS08855	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NMB96_RS08870	COG0582	viral genome integration into host DNA
NMB96_RS08890	COG4584	PFAM Integrase catalytic
NMB96_RS08895	COG1484	DNA-dependent DNA replication
NMB96_RS08965	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NMB96_RS08985	COG4584	PFAM Integrase catalytic
NMB96_RS08990	COG1484	DNA-dependent DNA replication
NMB96_RS09010	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NMB96_RS09030	COG0840	transmembrane signaling receptor activity
NMB96_RS09050	COG0251	oxidation-reduction process
NMB96_RS09065	COG1131	(ABC) transporter
NMB96_RS09105	COG2814	Major facilitator Superfamily
NMB96_RS09110	COG0583	DNA-binding transcription factor activity
NMB96_RS09135	COG1063	alcohol dehydrogenase
NMB96_RS09150	COG1271	oxidase subunit
NMB96_RS09155	COG1294	oxidase, subunit
NMB96_RS09170	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS09175	COG2204	response regulator
NMB96_RS09195	COG3546	catalase activity
NMB96_RS09200	COG3685	Protein conserved in bacteria
NMB96_RS09225	COG2972	Histidine kinase
NMB96_RS09240	COG0531	amino acid
NMB96_RS09255	COG3590	peptidase
NMB96_RS09265	COG0667	Aldo Keto reductase
NMB96_RS09275	COG0583	DNA-binding transcription factor activity
NMB96_RS09285	COG3384	dioxygenase
NMB96_RS09295	COG1573	uracil-dna glycosylase
NMB96_RS09300	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
NMB96_RS09310	COG0025	NhaP-type Na H and K H
NMB96_RS09315	COG1131	(ABC) transporter
NMB96_RS09320	COG0842	Transport permease protein
NMB96_RS09380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NMB96_RS09385	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NMB96_RS09405	COG0784	Response regulator, receiver
NMB96_RS09405	COG2205	protein histidine kinase activity
NMB96_RS09405	COG2198	Histidine kinase
NMB96_RS09405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NMB96_RS09425	COG2813	Specifically methylates the guanine in position
NMB96_RS09430	COG1187	pseudouridine synthase activity
NMB96_RS09450	COG1666	GTP binding
NMB96_RS09455	COG0697	spore germination
NMB96_RS09460	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NMB96_RS09465	COG2011	ABC-type metal ion transport system permease component
NMB96_RS09495	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMB96_RS09505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NMB96_RS09520	COG0356	it plays a direct role in the translocation of protons across the membrane
NMB96_RS09530	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NMB96_RS09570	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NMB96_RS09580	COG4191	Histidine kinase
NMB96_RS09590	COG0577	efflux transmembrane transporter activity
NMB96_RS09595	COG0577	efflux transmembrane transporter activity
NMB96_RS09595	COG1136	(ABC) transporter
NMB96_RS09600	COG1136	(ABC) transporter
NMB96_RS09605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS09610	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NMB96_RS09615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMB96_RS09665	COG0339	signal peptide processing
NMB96_RS09680	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NMB96_RS09690	COG0546	phosphoglycolate phosphatase activity
NMB96_RS09700	COG2819	hydrolase of the alpha beta superfamily
NMB96_RS09710	COG1956	GAF domain-containing protein
NMB96_RS09715	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NMB96_RS09725	COG0720	synthase
NMB96_RS09730	COG4771	TonB-dependent receptor
NMB96_RS09740	COG0513	Belongs to the DEAD box helicase family
NMB96_RS09750	COG0625	glutathione transferase activity
NMB96_RS09780	COG0626	cystathionine gamma-synthase activity
NMB96_RS09840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMB96_RS09850	COG0277	FAD linked oxidase domain protein
NMB96_RS09855	COG0546	phosphoglycolate phosphatase activity
NMB96_RS09855	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
NMB96_RS09870	COG2086	electron transfer activity
NMB96_RS09895	COG0662	Cupin 2, conserved barrel domain protein
NMB96_RS09895	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
NMB96_RS09900	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMB96_RS09940	COG3218	ABC-type transport auxiliary lipoprotein component
NMB96_RS09940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NMB96_RS09945	COG1127	ABC transporter
NMB96_RS09950	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NMB96_RS09965	COG0442	prolyl-tRNA aminoacylation
NMB96_RS09975	COG1183	phosphatidylcholine synthase activity
NMB96_RS10000	COG0525	valine-tRNA ligase activity
NMB96_RS10025	COG0795	lipopolysaccharide-transporting ATPase activity
NMB96_RS10040	COG4974	Belongs to the 'phage' integrase family
NMB96_RS10045	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NMB96_RS10050	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMB96_RS10050	COG0047	phosphoribosylformylglycinamidine synthase activity
NMB96_RS10060	COG1404	Belongs to the peptidase S8 family
NMB96_RS10070	COG5295	Hep Hag repeat protein
NMB96_RS10075	COG1404	Belongs to the peptidase S8 family
NMB96_RS10080	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NMB96_RS10085	COG1459	type II secretion system
NMB96_RS10090	COG2165	general secretion pathway protein
NMB96_RS10095	COG4970	Tfp pilus assembly protein FimT
NMB96_RS10100	COG2165	general secretion pathway protein
NMB96_RS10105	COG4795	General secretion pathway protein
NMB96_RS10110	COG3156	type II secretion system protein K
NMB96_RS10115	COG3166	PFAM Fimbrial assembly family protein
NMB96_RS10130	COG1450	Type ii and iii secretion system protein
NMB96_RS10145	COG2188	Transcriptional regulator
NMB96_RS10190	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NMB96_RS10205	COG0242	peptide deformylase activity
NMB96_RS10210	COG0488	(ABC) transporter
NMB96_RS10220	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMB96_RS10235	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NMB96_RS10235	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NMB96_RS10275	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NMB96_RS10290	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NMB96_RS10295	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NMB96_RS10305	COG2205	protein histidine kinase activity
NMB96_RS10310	COG0745	RESPONSE REGULATOR receiver
NMB96_RS10325	COG0277	FAD linked oxidase domain protein
NMB96_RS10330	COG1988	membrane-bound metal-dependent
NMB96_RS10335	COG0792	nuclease activity
NMB96_RS10375	COG0275	rRNA processing
NMB96_RS10380	COG3116	cell division
NMB96_RS10390	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NMB96_RS10395	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NMB96_RS10410	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NMB96_RS10415	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NMB96_RS10420	COG1181	Belongs to the D-alanine--D-alanine ligase family
NMB96_RS10425	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NMB96_RS10435	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NMB96_RS10450	COG0739	heme binding
NMB96_RS10455	COG0653	protein targeting
NMB96_RS10465	COG0494	nUDIX hydrolase
NMB96_RS10480	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NMB96_RS10490	COG3321	synthase
NMB96_RS10490	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS10490	COG0604	alcohol dehydrogenase
NMB96_RS10535	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NMB96_RS10570	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NMB96_RS10580	COG4106	trans-aconitate 2-methyltransferase activity
NMB96_RS10585	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NMB96_RS10595	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NMB96_RS10600	COG0667	Aldo Keto reductase
NMB96_RS10610	COG4771	TonB-dependent receptor
NMB96_RS10630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMB96_RS10635	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NMB96_RS10645	COG2175	clavaminate synthase activity
NMB96_RS10655	COG4181	ATPase activity
NMB96_RS10670	COG0642	Histidine kinase
NMB96_RS10680	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NMB96_RS10705	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NMB96_RS10725	COG1116	anion transmembrane transporter activity
NMB96_RS10730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMB96_RS10740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMB96_RS10745	COG0431	NADPH-dependent FMN reductase
NMB96_RS10750	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NMB96_RS10755	COG2967	ApaG domain
NMB96_RS10760	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NMB96_RS10765	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NMB96_RS10780	COG0123	including yeast histone deacetylase and acetoin utilization protein
NMB96_RS10785	COG2096	Adenosyltransferase
NMB96_RS10795	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMB96_RS10800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMB96_RS10830	COG3384	dioxygenase
NMB96_RS10835	COG0583	DNA-binding transcription factor activity
NMB96_RS10840	COG0318	PFAM AMP-dependent synthetase and ligase
NMB96_RS10850	COG1024	Enoyl-CoA hydratase
NMB96_RS10870	COG3386	PFAM SMP-30 Gluconolaconase
NMB96_RS10895	COG0697	spore germination
NMB96_RS10900	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMB96_RS10925	COG2197	response regulator
NMB96_RS10935	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NMB96_RS10945	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NMB96_RS10950	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NMB96_RS10955	COG0583	DNA-binding transcription factor activity
NMB96_RS10960	COG3634	alkyl hydroperoxide reductase activity
NMB96_RS10970	COG2890	protein-(glutamine-N5) methyltransferase activity
NMB96_RS10995	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NMB96_RS10995	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NMB96_RS11045	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NMB96_RS11050	COG1404	Belongs to the peptidase S8 family
NMB96_RS11060	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NMB96_RS11080	COG1295	ribonuclease BN
NMB96_RS11085	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NMB96_RS11105	COG0521	Mo-molybdopterin cofactor biosynthetic process
NMB96_RS11125	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NMB96_RS11135	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NMB96_RS11150	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMB96_RS11155	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NMB96_RS11160	COG0193	aminoacyl-tRNA hydrolase activity
NMB96_RS11165	COG0012	GTP binding
NMB96_RS11200	COG0250	Participates in transcription elongation, termination and antitermination
NMB96_RS11205	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NMB96_RS11210	COG0081	regulation of translation
NMB96_RS11215	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NMB96_RS11220	COG0222	ribosome binding
NMB96_RS11230	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMB96_RS11235	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NMB96_RS11250	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NMB96_RS11255	COG0051	transcription antitermination factor activity, RNA binding
NMB96_RS11275	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NMB96_RS11285	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NMB96_RS11300	COG0255	Belongs to the universal ribosomal protein uL29 family
NMB96_RS11305	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NMB96_RS11315	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NMB96_RS11360	COG0201	protein transport
NMB96_RS11385	COG0203	ribosomal protein L17
NMB96_RS11395	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
NMB96_RS11405	COG0154	amidase activity
NMB96_RS11415	COG1217	gtp-binding protein TYPA
NMB96_RS11420	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NMB96_RS11430	COG0625	glutathione transferase activity
NMB96_RS11450	COG1902	pentaerythritol trinitrate reductase activity
NMB96_RS11450	COG0446	pyridine nucleotide-disulphide oxidoreductase
NMB96_RS11455	COG0604	alcohol dehydrogenase
NMB96_RS11460	COG2885	chlorophyll binding
NMB96_RS11480	COG0156	8-amino-7-oxononanoate synthase activity
NMB96_RS11485	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NMB96_RS11490	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NMB96_RS11495	COG4208	sulfate ABC transporter
NMB96_RS11500	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NMB96_RS11510	COG1063	alcohol dehydrogenase
NMB96_RS11530	COG0406	alpha-ribazole phosphatase activity
NMB96_RS11540	COG0285	dihydrofolate synthase activity
NMB96_RS11560	COG2833	Protein of unknown function (DUF455)
NMB96_RS11565	COG3291	Pkd domain containing protein
NMB96_RS11575	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NMB96_RS11580	COG0671	phosphoesterase, PA-phosphatase related
NMB96_RS11585	COG0438	transferase activity, transferring glycosyl groups
NMB96_RS11595	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NMB96_RS11605	COG0745	RESPONSE REGULATOR receiver
NMB96_RS11610	COG4783	chaperone-mediated protein folding
NMB96_RS11625	COG0473	3-isopropylmalate dehydrogenase activity
NMB96_RS11680	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NMB96_RS11710	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NMB96_RS11720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NMB96_RS11740	COG0631	protein serine/threonine phosphatase activity
NMB96_RS11755	COG0859	PFAM glycosyl transferase family 9
NMB96_RS11770	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NMB96_RS11775	COG0315	cyclic pyranopterin monophosphate synthase activity
NMB96_RS11780	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NMB96_RS11785	COG0314	molybdopterin synthase activity
NMB96_RS11805	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NMB96_RS11815	COG0537	adenosine 5'-monophosphoramidase activity
NMB96_RS11835	COG0714	Associated with various cellular activities
NMB96_RS11855	COG1399	metal-binding, possibly nucleic acid-binding protein
NMB96_RS11860	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NMB96_RS11865	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMB96_RS11870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NMB96_RS11890	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NMB96_RS11895	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NMB96_RS11915	COG4115	mRNA cleavage
NMB96_RS11920	COG2161	toxin-antitoxin pair type II binding
NMB96_RS11930	COG3829	transcription factor binding
NMB96_RS11945	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NMB96_RS11950	COG3609	addiction module antidote protein, CC2985 family
NMB96_RS11975	COG2373	Large extracellular alpha-helical protein
NMB96_RS12005	COG0577	efflux transmembrane transporter activity
NMB96_RS12005	COG1136	(ABC) transporter
NMB96_RS12015	COG2204	response regulator
NMB96_RS12035	COG0678	peroxiredoxin activity
NMB96_RS12055	COG0330	HflC and HflK could
NMB96_RS12060	COG0330	HflC and HflK could
NMB96_RS12130	COG0732	type I restriction modification DNA specificity domain
NMB96_RS12185	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NMB96_RS12195	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS12205	COG3537	Alpha-1,2-mannosidase
NMB96_RS12265	COG2271	Major facilitator Superfamily
NMB96_RS12290	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NMB96_RS12295	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NMB96_RS12300	COG2080	2 iron, 2 sulfur cluster binding
NMB96_RS12355	COG0587	DNA-directed DNA polymerase activity
NMB96_RS12365	COG1297	OPT oligopeptide transporter protein
NMB96_RS12385	COG1506	peptidase
NMB96_RS12385	COG0823	Involved in the tonB-independent uptake of proteins
NMB96_RS12400	COG1917	Cupin 2, conserved barrel domain protein
NMB96_RS12400	COG2207	Transcriptional regulator
NMB96_RS12410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS12450	COG0753	catalase activity
NMB96_RS12460	COG0656	L-ascorbic acid biosynthetic process
NMB96_RS12475	COG2814	Major facilitator Superfamily
NMB96_RS12495	COG2194	sulfuric ester hydrolase activity
NMB96_RS12510	COG0745	RESPONSE REGULATOR receiver
NMB96_RS12515	COG5002	protein histidine kinase activity
NMB96_RS12525	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NMB96_RS12530	COG2894	cell division
NMB96_RS12545	COG4585	Histidine kinase
NMB96_RS12550	COG2197	response regulator
NMB96_RS12565	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
NMB96_RS12605	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
NMB96_RS12620	COG1595	DNA-templated transcription, initiation
NMB96_RS12630	COG1946	Acyl-CoA thioesterase
NMB96_RS12635	COG1024	Enoyl-CoA hydratase
NMB96_RS12645	COG0824	Thioesterase
NMB96_RS12650	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NMB96_RS12660	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NMB96_RS12665	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NMB96_RS12675	COG0728	peptidoglycan biosynthetic process
NMB96_RS12680	COG0196	riboflavin kinase activity
NMB96_RS12690	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NMB96_RS12710	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NMB96_RS12715	COG1845	cytochrome c oxidase, subunit III
NMB96_RS12720	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NMB96_RS12735	COG3152	Membrane
NMB96_RS12745	COG2207	Transcriptional regulator
NMB96_RS12750	COG0326	Molecular chaperone. Has ATPase activity
NMB96_RS12760	COG1902	pentaerythritol trinitrate reductase activity
NMB96_RS12765	COG1366	Belongs to the anti-sigma-factor antagonist family
NMB96_RS12770	COG1366	Belongs to the anti-sigma-factor antagonist family
NMB96_RS12775	COG2172	sigma factor antagonist activity
NMB96_RS12800	COG4771	TonB-dependent receptor
NMB96_RS12810	COG5507	3-demethylubiquinone-9 3-methyltransferase
NMB96_RS12815	COG2205	protein histidine kinase activity
NMB96_RS12820	COG2201	protein-glutamate methylesterase activity
NMB96_RS12825	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NMB96_RS12830	COG2205	protein histidine kinase activity
NMB96_RS12830	COG3437	response regulator, receiver
NMB96_RS12830	COG3850	Histidine kinase
NMB96_RS12830	COG4999	Histidine kinase
NMB96_RS12835	COG0784	Response regulator, receiver
NMB96_RS12835	COG4191	Histidine kinase
NMB96_RS12865	COG3534	alpha-L-arabinofuranosidase
NMB96_RS12920	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NMB96_RS12945	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NMB96_RS12950	COG0336	Belongs to the RNA methyltransferase TrmD family
NMB96_RS12960	COG0534	Mate efflux family protein
NMB96_RS12970	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
NMB96_RS12980	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NMB96_RS13020	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMB96_RS13040	COG0583	DNA-binding transcription factor activity
NMB96_RS13045	COG1301	dicarboxylic acid transport
NMB96_RS13050	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS13055	COG3250	beta-galactosidase activity
NMB96_RS13060	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NMB96_RS13080	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS13085	COG1024	Enoyl-CoA hydratase
NMB96_RS13105	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMB96_RS13105	COG1024	Enoyl-CoA hydratase
NMB96_RS13120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NMB96_RS13145	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NMB96_RS13150	COG1381	Involved in DNA repair and RecF pathway recombination
NMB96_RS13170	COG2954	triphosphatase activity
NMB96_RS13175	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NMB96_RS13185	COG3046	protein related to deoxyribodipyrimidine photolyase
NMB96_RS13190	COG1472	Belongs to the glycosyl hydrolase 3 family
NMB96_RS13195	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NMB96_RS13200	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NMB96_RS13205	COG1278	Cold shock
NMB96_RS13210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMB96_RS13220	COG1201	RNA secondary structure unwinding
NMB96_RS13225	COG1793	dna ligase
NMB96_RS13235	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NMB96_RS13235	COG1793	dna ligase
NMB96_RS13265	COG0183	Belongs to the thiolase family
NMB96_RS13285	COG1451	nucleotide metabolic process
NMB96_RS13290	COG5487	UPF0391 membrane protein
NMB96_RS13300	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NMB96_RS13340	COG1047	Peptidyl-prolyl cis-trans
NMB96_RS13350	COG2824	Alkylphosphonate utilization operon protein PhnA
NMB96_RS13370	COG2814	Major facilitator Superfamily
NMB96_RS13405	COG0392	lysyltransferase activity
NMB96_RS13405	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMB96_RS13415	COG0251	oxidation-reduction process
NMB96_RS13420	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NMB96_RS13435	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NMB96_RS13460	COG1595	DNA-templated transcription, initiation
NMB96_RS13475	COG2878	Part of a membrane complex involved in electron transport
NMB96_RS13485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMB96_RS13485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMB96_RS13500	COG1131	(ABC) transporter
NMB96_RS13505	COG0346	lactoylglutathione lyase activity
NMB96_RS13510	COG0833	amino acid
NMB96_RS13515	COG2040	homocysteine
NMB96_RS13535	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NMB96_RS13550	COG3039	Transposase
NMB96_RS13560	COG1695	Transcriptional regulator
NMB96_RS13580	COG1981	membrane
NMB96_RS13590	COG0825	malonyl-CoA metabolic process
NMB96_RS13605	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NMB96_RS13610	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NMB96_RS13615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NMB96_RS13620	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NMB96_RS13635	COG0750	zinc metalloprotease
NMB96_RS13640	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NMB96_RS13645	COG0575	Belongs to the CDS family
NMB96_RS13650	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NMB96_RS13660	COG0528	UMP kinase activity
NMB96_RS13670	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NMB96_RS13675	COG0052	Belongs to the universal ribosomal protein uS2 family
NMB96_RS13720	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
NMB96_RS13735	COG1393	Belongs to the ArsC family
NMB96_RS13740	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NMB96_RS13750	COG0367	asparagine synthase
NMB96_RS13760	COG4774	siderophore transport
NMB96_RS13800	COG1566	PFAM secretion protein HlyD family protein
NMB96_RS13805	COG2814	Major facilitator Superfamily
NMB96_RS13810	COG1537	nuclear-transcribed mRNA catabolic process, no-go decay
NMB96_RS13860	COG0339	signal peptide processing
NMB96_RS13865	COG0386	Belongs to the glutathione peroxidase family
NMB96_RS13895	COG0288	reversible hydration of carbon dioxide
NMB96_RS13930	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NMB96_RS13935	COG0084	hydrolase, TatD family'
NMB96_RS13950	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS13965	COG0367	asparagine synthase
NMB96_RS13975	COG0305	Participates in initiation and elongation during chromosome replication
NMB96_RS13980	COG0415	Belongs to the DNA photolyase family
NMB96_RS13990	COG0583	DNA-binding transcription factor activity
NMB96_RS14000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS14030	COG3706	GGDEF domain
NMB96_RS14130	COG1484	DNA-dependent DNA replication
NMB96_RS14135	COG4584	PFAM Integrase catalytic
NMB96_RS14160	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NMB96_RS14175	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NMB96_RS14185	COG0497	DNA recombination
NMB96_RS14190	COG1420	regulation of RNA biosynthetic process
NMB96_RS14195	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NMB96_RS14210	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NMB96_RS14235	COG2274	protein secretion by the type I secretion system
NMB96_RS14240	COG0583	DNA-binding transcription factor activity
NMB96_RS14245	COG1132	(ABC) transporter
NMB96_RS14280	COG2850	peptidyl-arginine hydroxylation
NMB96_RS14295	COG1253	flavin adenine dinucleotide binding
NMB96_RS14325	COG1131	(ABC) transporter
NMB96_RS14330	COG1725	Transcriptional regulator
NMB96_RS14340	COG0386	Belongs to the glutathione peroxidase family
NMB96_RS14355	COG2900	Belongs to the SlyX family
NMB96_RS14380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMB96_RS14390	COG0646	methionine synthase
NMB96_RS14390	COG1410	methionine synthase
NMB96_RS14405	COG2226	methyltransferase
NMB96_RS14410	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS14425	COG0557	exoribonuclease II activity
NMB96_RS14435	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMB96_RS14445	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NMB96_RS14455	COG0704	Plays a role in the regulation of phosphate uptake
NMB96_RS14465	COG0581	inorganic phosphate transmembrane transporter activity
NMB96_RS14470	COG0573	inorganic phosphate transmembrane transporter activity
NMB96_RS14475	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NMB96_RS14500	COG0659	secondary active sulfate transmembrane transporter activity
NMB96_RS14505	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NMB96_RS14515	COG1024	Enoyl-CoA hydratase
NMB96_RS14565	COG0488	(ABC) transporter
NMB96_RS14580	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NMB96_RS14590	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NMB96_RS14605	COG2925	Exonuclease
NMB96_RS14610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMB96_RS14630	COG0288	reversible hydration of carbon dioxide
NMB96_RS14635	COG2808	Putative FMN-binding domain
NMB96_RS14655	COG0017	Asparaginyl-tRNA synthetase
NMB96_RS14660	COG0316	Belongs to the HesB IscA family
NMB96_RS14685	COG3115	cell septum assembly
NMB96_RS14695	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMB96_RS14700	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NMB96_RS14705	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
NMB96_RS14715	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
NMB96_RS14725	COG4993	Dehydrogenase
NMB96_RS14740	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NMB96_RS14750	COG2986	histidine ammonia-lyase
NMB96_RS14755	COG1228	amidohydrolase
NMB96_RS14790	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NMB96_RS14795	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NMB96_RS14800	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NMB96_RS14805	COG0077	Prephenate dehydratase
NMB96_RS14805	COG1605	Chorismate mutase
NMB96_RS14810	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NMB96_RS14825	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NMB96_RS14830	COG0583	DNA-binding transcription factor activity
NMB96_RS14950	COG0840	transmembrane signaling receptor activity
NMB96_RS14955	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NMB96_RS14960	COG0840	transmembrane signaling receptor activity
NMB96_RS14985	COG2003	Belongs to the UPF0758 family
NMB96_RS15020	COG0084	hydrolase, TatD family'
NMB96_RS15090	COG0840	transmembrane signaling receptor activity
NMB96_RS15110	COG5002	protein histidine kinase activity
NMB96_RS15110	COG0784	Response regulator, receiver
NMB96_RS15110	COG2205	protein histidine kinase activity
NMB96_RS15115	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
NMB96_RS15120	COG4191	Histidine kinase
NMB96_RS15120	COG0784	Response regulator, receiver
NMB96_RS15135	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NMB96_RS15145	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
NMB96_RS15155	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NMB96_RS15220	COG2244	polysaccharide biosynthetic process
NMB96_RS15250	COG2264	protein methyltransferase activity
NMB96_RS15260	COG0438	transferase activity, transferring glycosyl groups
NMB96_RS15275	COG1136	(ABC) transporter
NMB96_RS15280	COG1132	(ABC) transporter
NMB96_RS15285	COG0477	Major facilitator Superfamily
NMB96_RS15290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMB96_RS15305	COG1253	flavin adenine dinucleotide binding
NMB96_RS15340	COG0504	CTP synthase activity
NMB96_RS15355	COG0148	phosphopyruvate hydratase activity
NMB96_RS15365	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NMB96_RS15370	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NMB96_RS15380	COG2840	Smr protein MutS2
NMB96_RS15385	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NMB96_RS15390	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NMB96_RS15395	COG1238	metal cluster binding
NMB96_RS15410	COG1534	Rna-binding protein
NMB96_RS15415	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
NMB96_RS15425	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NMB96_RS15430	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NMB96_RS15440	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NMB96_RS15445	COG1546	Belongs to the CinA family
NMB96_RS15455	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NMB96_RS15465	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NMB96_RS15470	COG2137	regulation of response to DNA damage stimulus
NMB96_RS15475	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NMB96_RS15480	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NMB96_RS15495	COG1741	Belongs to the pirin family
NMB96_RS15500	COG0583	DNA-binding transcription factor activity
NMB96_RS15520	COG0351	phosphomethylpyrimidine kinase
NMB96_RS15520	COG0352	thiamine-phosphate diphosphorylase activity
NMB96_RS15535	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NMB96_RS15540	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NMB96_RS15555	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMB96_RS15565	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NMB96_RS15580	COG4948	Mandelate Racemase Muconate Lactonizing
NMB96_RS15585	COG0800	Aldolase
NMB96_RS15620	COG1501	Belongs to the glycosyl hydrolase 31 family
NMB96_RS15630	COG1070	Carbohydrate kinase
NMB96_RS15635	COG2115	Belongs to the xylose isomerase family
NMB96_RS15640	COG0477	Major facilitator Superfamily
NMB96_RS15660	COG0860	N-Acetylmuramoyl-L-alanine amidase
NMB96_RS15680	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NMB96_RS15685	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NMB96_RS15690	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NMB96_RS15695	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
NMB96_RS15720	COG1472	Belongs to the glycosyl hydrolase 3 family
NMB96_RS15730	COG3706	GGDEF domain
NMB96_RS15730	COG2203	Gaf domain
NMB96_RS15730	COG4251	negative regulation of phosphorylation
NMB96_RS15730	COG5001	Diguanylate cyclase
NMB96_RS15735	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMB96_RS15740	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
NMB96_RS15750	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NMB96_RS15755	COG0671	phosphoesterase, PA-phosphatase related
NMB96_RS15770	COG0697	spore germination
NMB96_RS15775	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NMB96_RS15780	COG0167	dihydroorotate dehydrogenase activity
NMB96_RS15795	COG1012	belongs to the aldehyde dehydrogenase family
NMB96_RS15845	COG1215	transferase activity, transferring glycosyl groups
NMB96_RS15850	COG1649	PFAM Uncharacterised BCR, COG1649
NMB96_RS15850	COG0726	polysaccharide deacetylase
NMB96_RS15860	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
NMB96_RS15865	COG0527	aspartate kinase activity
NMB96_RS15865	COG0460	homoserine dehydrogenase
NMB96_RS15890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMB96_RS15895	COG0124	histidyl-tRNA synthetase
NMB96_RS15905	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NMB96_RS15910	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NMB96_RS15915	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMB96_RS15920	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NMB96_RS15920	COG0131	Imidazoleglycerol-phosphate dehydratase
NMB96_RS15930	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NMB96_RS15940	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NMB96_RS15940	COG0140	phosphoribosyl-ATP diphosphatase activity
NMB96_RS15955	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
NMB96_RS15970	COG0531	amino acid
NMB96_RS15975	COG0531	amino acid
NMB96_RS15985	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NMB96_RS15990	COG0277	FAD linked oxidase domain protein
NMB96_RS16010	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NMB96_RS16025	COG1024	Enoyl-CoA hydratase
NMB96_RS16045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NMB96_RS16055	COG0505	Belongs to the CarA family
NMB96_RS16065	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NMB96_RS16070	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NMB96_RS16080	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NMB96_RS16105	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NMB96_RS16115	COG2198	Histidine kinase
NMB96_RS16115	COG2205	protein histidine kinase activity
NMB96_RS16115	COG0784	Response regulator, receiver
NMB96_RS16120	COG1024	Enoyl-CoA hydratase
NMB96_RS16155	COG0318	PFAM AMP-dependent synthetase and ligase
NMB96_RS16185	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NMB96_RS16195	COG2201	protein-glutamate methylesterase activity
NMB96_RS16210	COG0840	transmembrane signaling receptor activity
NMB96_RS16220	COG0835	chemotaxis
NMB96_RS16230	COG0840	transmembrane signaling receptor activity
NMB96_RS16235	COG0840	transmembrane signaling receptor activity
NMB96_RS16240	COG0840	transmembrane signaling receptor activity
NMB96_RS16245	COG0840	transmembrane signaling receptor activity
NMB96_RS16250	COG0840	transmembrane signaling receptor activity
NMB96_RS16255	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
NMB96_RS16255	COG3264	Mechanosensitive ion channel
NMB96_RS16260	COG0840	transmembrane signaling receptor activity
NMB96_RS16265	COG0840	transmembrane signaling receptor activity
NMB96_RS16290	COG0840	transmembrane signaling receptor activity
NMB96_RS16290	COG0840	transmembrane signaling receptor activity
NMB96_RS16300	COG0840	transmembrane signaling receptor activity
NMB96_RS16315	COG2198	Histidine kinase
NMB96_RS16315	COG0643	Histidine kinase
NMB96_RS16320	COG0745	RESPONSE REGULATOR receiver
NMB96_RS16330	COG0835	chemotaxis
NMB96_RS16335	COG1192	Involved in chromosome partitioning
NMB96_RS16345	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NMB96_RS16405	COG0643	Histidine kinase
NMB96_RS16405	COG0784	Response regulator, receiver
NMB96_RS16405	COG2198	Histidine kinase
NMB96_RS16455	COG3300	MHYT domain
NMB96_RS16455	COG5001	Diguanylate cyclase
NMB96_RS16475	COG3190	flagellar
NMB96_RS16525	COG1677	Flagellar hook-basal body complex protein FliE
NMB96_RS16565	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS16575	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMB96_RS16595	COG2201	protein-glutamate methylesterase activity
NMB96_RS16625	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
NMB96_RS16630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NMB96_RS16655	COG1705	Flagellar rod assembly protein muramidase FlgJ
NMB96_RS16655	COG3951	Flagellar rod assembly protein muramidase FlgJ
NMB96_RS16675	COG4787	bacterial-type flagellum-dependent cell motility
NMB96_RS16685	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
NMB96_RS16690	COG1558	bacterial-type flagellum-dependent cell motility
NMB96_RS16700	COG0784	Response regulator, receiver
NMB96_RS16700	COG0835	chemotaxis
NMB96_RS16720	COG4191	Histidine kinase
NMB96_RS16760	COG0482	sulfurtransferase activity
NMB96_RS16775	COG0542	response to heat
NMB96_RS16785	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NMB96_RS16795	COG0492	ferredoxin-NADP+ reductase activity
NMB96_RS16800	COG1674	ftsk spoiiie
NMB96_RS16815	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NMB96_RS16820	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMB96_RS16825	COG0183	Belongs to the thiolase family
NMB96_RS16830	COG1024	Enoyl-CoA hydratase
NMB96_RS16830	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMB96_RS16845	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NMB96_RS16855	COG1426	Protein conserved in bacteria
NMB96_RS16865	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NMB96_RS16870	COG1160	GTP binding
NMB96_RS16875	COG0303	'Molybdopterin
NMB96_RS16880	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NMB96_RS16890	COG0708	Exodeoxyribonuclease III
NMB96_RS16900	COG0303	'Molybdopterin
NMB96_RS16905	COG0746	molybdenum cofactor guanylyltransferase activity
NMB96_RS16915	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NMB96_RS16915	COG1648	precorrin-2 dehydrogenase activity
NMB96_RS16935	COG2223	nitrite transmembrane transporter activity
NMB96_RS16940	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NMB96_RS16950	COG0243	molybdopterin cofactor binding
NMB96_RS16970	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
NMB96_RS16980	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NMB96_RS17000	COG3685	Protein conserved in bacteria
NMB96_RS17020	COG1484	DNA-dependent DNA replication
NMB96_RS17025	COG4584	PFAM Integrase catalytic
NMB96_RS17065	COG2205	protein histidine kinase activity
NMB96_RS17080	COG3713	MltA-interacting MipA family protein
NMB96_RS17120	COG4191	Histidine kinase
NMB96_RS17120	COG0784	Response regulator, receiver
NMB96_RS17155	COG3781	membrane
NMB96_RS17160	COG4191	Histidine kinase
NMB96_RS17165	COG2197	response regulator
NMB96_RS17195	COG0840	transmembrane signaling receptor activity
NMB96_RS17305	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
NMB96_RS17325	COG1054	Belongs to the UPF0176 family
NMB96_RS17335	COG1530	ribonuclease E activity
NMB96_RS17345	COG0428	transporter
NMB96_RS17355	COG2154	pterin-4-alpha-carbinolamine dehydratase
NMB96_RS17545	COG5599	Phosphatase
NMB96_RS17560	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NMB96_RS17565	COG1061	Type III restriction enzyme res subunit
NMB96_RS17570	COG1002	Type II restriction enzyme, methylase subunits
NMB96_RS17630	COG0629	single-stranded DNA binding
NMB96_RS17635	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NMB96_RS17640	COG0270	DNA (cytosine-5-)-methyltransferase activity
NMB96_RS17815	COG2003	Belongs to the UPF0758 family
NMB96_RS17850	COG0560	Phosphoserine phosphatase
NMB96_RS17850	COG3830	Belongs to the UPF0237 family
NMB96_RS17860	COG4221	oxidoreductase activity
NMB96_RS17880	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS17985	COG0583	DNA-binding transcription factor activity
NMB96_RS18000	COG0582	viral genome integration into host DNA
NMB96_RS18045	COG1247	-acetyltransferase
NMB96_RS18065	COG0322	excinuclease ABC activity
NMB96_RS18075	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMB96_RS18080	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NMB96_RS18085	COG1663	tetraacyldisaccharide 4'-kinase activity
NMB96_RS18090	COG1132	(ABC) transporter
NMB96_RS18100	COG0811	peptide transport
NMB96_RS18115	COG1136	(ABC) transporter
NMB96_RS18120	COG4591	ABC-type transport system involved in lipoprotein release permease component
NMB96_RS18130	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NMB96_RS18135	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NMB96_RS18150	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NMB96_RS18155	COG2009	succinate dehydrogenase
NMB96_RS18165	COG0354	folic acid binding
NMB96_RS18175	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NMB96_RS18180	COG0837	glucose binding
NMB96_RS18185	COG0363	glucosamine-6-phosphate deaminase activity
NMB96_RS18190	COG0129	dihydroxy-acid dehydratase activity
NMB96_RS18195	COG0800	Aldolase
NMB96_RS18260	COG0784	Response regulator, receiver
NMB96_RS18260	COG2205	protein histidine kinase activity
NMB96_RS18260	COG5002	protein histidine kinase activity
NMB96_RS18265	COG2183	response to ionizing radiation
NMB96_RS18275	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NMB96_RS18275	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
NMB96_RS18290	COG3243	poly(R)-hydroxyalkanoic acid synthase
NMB96_RS18300	COG1183	phosphatidylcholine synthase activity
NMB96_RS18305	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS18330	COG0668	transmembrane transport
NMB96_RS18335	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NMB96_RS18350	COG1914	H( )-stimulated, divalent metal cation uptake system
NMB96_RS18375	COG2814	Major facilitator Superfamily
NMB96_RS18390	COG1335	isochorismatase
NMB96_RS18400	COG4585	Histidine kinase
NMB96_RS18405	COG2197	response regulator
NMB96_RS18440	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NMB96_RS18450	COG0475	glutathione-regulated potassium exporter activity
NMB96_RS18450	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NMB96_RS18455	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NMB96_RS18465	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NMB96_RS18470	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NMB96_RS18480	COG0776	regulation of translation
NMB96_RS18490	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NMB96_RS18505	COG2957	Belongs to the agmatine deiminase family
NMB96_RS18510	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMB96_RS18535	COG0395	ABC-type sugar transport system, permease component
NMB96_RS18540	COG1175	transmembrane transport
NMB96_RS18545	COG1653	transport
NMB96_RS18570	COG2350	Protein conserved in bacteria
NMB96_RS18575	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NMB96_RS18580	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NMB96_RS18585	COG1187	pseudouridine synthase activity
NMB96_RS18600	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMB96_RS18605	COG0436	Aminotransferase
NMB96_RS18630	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
NMB96_RS18665	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NMB96_RS18670	COG4988	ABC transporter
NMB96_RS18680	COG1294	oxidase, subunit
NMB96_RS18715	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NMB96_RS18730	COG0165	Argininosuccinate lyase
NMB96_RS18745	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NMB96_RS18750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NMB96_RS18755	COG0137	argininosuccinate synthase activity
NMB96_RS18760	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NMB96_RS18775	COG2166	iron-sulfur cluster assembly
NMB96_RS18795	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NMB96_RS18810	COG4303	Ethanolamine ammonia lyase large subunit
NMB96_RS18815	COG4302	ethanolamine ammonia-lyase activity
NMB96_RS18835	COG4677	pectinesterase activity
NMB96_RS18860	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NMB96_RS18865	COG0402	S-adenosylhomocysteine deaminase activity
NMB96_RS18885	COG3300	MHYT domain
NMB96_RS18885	COG5001	Diguanylate cyclase
NMB96_RS18900	COG0483	inositol monophosphate 1-phosphatase activity
NMB96_RS18905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NMB96_RS18920	COG0488	(ABC) transporter
NMB96_RS18925	COG0513	Belongs to the DEAD box helicase family
NMB96_RS18935	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NMB96_RS18945	COG0625	glutathione transferase activity
NMB96_RS18960	COG4681	YaeQ
NMB96_RS18965	COG2081	HI0933 family
NMB96_RS18970	COG3300	MHYT domain
NMB96_RS18970	COG5001	Diguanylate cyclase
NMB96_RS18975	COG0501	Belongs to the peptidase M48B family
NMB96_RS18980	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMB96_RS18985	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS19005	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NMB96_RS19010	COG0860	N-Acetylmuramoyl-L-alanine amidase
NMB96_RS19020	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NMB96_RS19020	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NMB96_RS19025	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NMB96_RS19040	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NMB96_RS19075	COG0835	chemotaxis
NMB96_RS19080	COG0840	transmembrane signaling receptor activity
NMB96_RS19085	COG2094	Belongs to the DNA glycosylase MPG family
NMB96_RS19090	COG1201	RNA secondary structure unwinding
NMB96_RS19100	COG2969	positive regulation of protein catabolic process
NMB96_RS19105	COG0625	glutathione transferase activity
NMB96_RS19110	COG2857	Cytochrome c1
NMB96_RS19115	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NMB96_RS19120	COG0723	plastoquinol--plastocyanin reductase activity
NMB96_RS19125	COG0741	lytic transglycosylase activity
NMB96_RS19140	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NMB96_RS19145	COG1702	phosphate starvation-inducible protein PhoH
NMB96_RS19155	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NMB96_RS19165	COG4535	Mg2 and Co2 transporter CorC
NMB96_RS19180	COG1012	belongs to the aldehyde dehydrogenase family
NMB96_RS19190	COG1177	transmembrane transport
NMB96_RS19195	COG1176	ABC-type spermidine putrescine transport system, permease component I
NMB96_RS19205	COG3842	ATPase activity
NMB96_RS19240	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NMB96_RS19245	COG0174	glutamine synthetase
NMB96_RS19250	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NMB96_RS19260	COG0477	Major facilitator Superfamily
NMB96_RS19270	COG0243	molybdopterin cofactor binding
NMB96_RS19280	COG2223	nitrite transmembrane transporter activity
NMB96_RS19285	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NMB96_RS19295	COG2733	membrane
NMB96_RS19300	COG5002	protein histidine kinase activity
NMB96_RS19300	COG2205	protein histidine kinase activity
NMB96_RS19300	COG0784	Response regulator, receiver
NMB96_RS19310	COG0477	Major facilitator Superfamily
NMB96_RS19320	COG0604	alcohol dehydrogenase
NMB96_RS19325	COG0300	oxidoreductase activity
NMB96_RS19345	COG3321	synthase
NMB96_RS19345	COG0604	alcohol dehydrogenase
NMB96_RS19350	COG2902	Dehydrogenase
NMB96_RS19360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMB96_RS19365	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMB96_RS19370	COG1609	Transcriptional regulator
NMB96_RS19375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMB96_RS19375	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NMB96_RS19380	COG1105	Belongs to the carbohydrate kinase PfkB family
NMB96_RS19385	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NMB96_RS19385	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NMB96_RS19430	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NMB96_RS19440	COG1862	Preprotein translocase
NMB96_RS19490	COG3291	Pkd domain containing protein
NMB96_RS19505	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NMB96_RS19520	COG0742	ribosomal rna small subunit methyltransferase
NMB96_RS19620	COG0531	amino acid
NMB96_RS19635	COG0006	proline dipeptidase activity
NMB96_RS19645	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMB96_RS19660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NMB96_RS19665	COG3938	Belongs to the proline racemase family
NMB96_RS19675	COG0552	protein localization to endoplasmic reticulum
NMB96_RS19680	COG1194	a g-specific adenine glycosylase
NMB96_RS19695	COG4191	Histidine kinase
NMB96_RS19695	COG0784	Response regulator, receiver
NMB96_RS19705	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NMB96_RS19770	COG3040	lipid binding
NMB96_RS19780	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS19790	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NMB96_RS19810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMB96_RS19815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NMB96_RS19820	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMB96_RS19845	COG0438	transferase activity, transferring glycosyl groups
NMB96_RS19855	COG0438	transferase activity, transferring glycosyl groups
NMB96_RS19860	COG0438	transferase activity, transferring glycosyl groups
NMB96_RS19910	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMB96_RS19910	COG0072	phenylalanine-tRNA ligase activity
NMB96_RS19915	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NMB96_RS19930	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NMB96_RS19935	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NMB96_RS20025	COG3702	type iv secretory pathway
NMB96_RS20045	COG2948	multi-organism process
NMB96_RS20065	COG3505	Type IV secretory pathway VirD4
NMB96_RS20075	COG0582	viral genome integration into host DNA
NMB96_RS20165	COG0556	nucleotide-excision repair
NMB96_RS20170	COG4969	Belongs to the N-Me-Phe pilin family
NMB96_RS20210	COG1611	Belongs to the LOG family
NMB96_RS20220	COG2095	MarC family integral membrane protein
NMB96_RS20225	COG1028	Short-chain dehydrogenase reductase Sdr
NMB96_RS20230	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NMB96_RS20275	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NMB96_RS20280	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NMB96_RS20285	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NMB96_RS20295	COG0195	Participates in both transcription termination and antitermination
NMB96_RS20300	COG0779	Required for maturation of 30S ribosomal subunits
NMB96_RS20310	COG1007	ATP synthesis coupled electron transport
NMB96_RS20330	COG0839	Belongs to the complex I subunit 6 family
NMB96_RS20340	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
NMB96_RS20350	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
NMB96_RS20355	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
NMB96_RS20360	COG0649	NAD binding
NMB96_RS20365	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NMB96_RS20375	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NMB96_RS20395	COG4221	oxidoreductase activity
NMB96_RS20425	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMB96_RS20435	COG0159	tryptophan synthase activity
NMB96_RS20445	COG0133	tryptophan synthase activity
NMB96_RS20460	COG0101	tRNA pseudouridine synthase activity
NMB96_RS20475	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NMB96_RS20480	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMB96_RS20495	COG2890	protein-(glutamine-N5) methyltransferase activity
NMB96_RS20505	COG0688	phosphatidylethanolamine metabolic process
NMB96_RS20515	COG0433	COG0433 Predicted ATPase
NMB96_RS20525	COG0494	nUDIX hydrolase
NMB96_RS20545	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NMB96_RS20595	COG4695	Portal protein
NMB96_RS20640	COG3179	chitinase
NMB96_RS20840	COG0717	Belongs to the dCTP deaminase family
NMB96_RS20845	COG0489	protein tyrosine kinase activity
NMB96_RS20870	COG3590	peptidase
NMB96_RS20875	COG3590	peptidase
NMB96_RS20895	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NMB96_RS20905	COG2311	Membrane
NMB96_RS20910	COG1047	Peptidyl-prolyl cis-trans
NMB96_RS20920	COG0791	NLP P60 protein
NMB96_RS20935	COG1301	dicarboxylic acid transport
NMB96_RS20940	COG1785	Belongs to the alkaline phosphatase family
NMB96_RS20945	COG0037	tRNA processing
NMB96_RS20950	COG1722	exodeoxyribonuclease VII activity
NMB96_RS20955	COG0142	geranyltranstransferase activity
NMB96_RS20960	COG4104	PAAR repeat-containing protein
NMB96_RS20970	COG0312	modulator of DNA gyrase
NMB96_RS20975	COG3028	Belongs to the UPF0307 family
NMB96_RS20980	COG0312	modulator of DNA gyrase
NMB96_RS20990	COG3164	Protein of unknown function
NMB96_RS21015	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NMB96_RS21050	COG0495	leucyl-tRNA aminoacylation
NMB96_RS21060	COG3118	belongs to the thioredoxin family
NMB96_RS21070	COG2155	Conserved Protein
NMB96_RS21110	COG1132	(ABC) transporter
NMB96_RS21120	COG0475	glutathione-regulated potassium exporter activity
NMB96_RS21130	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NMB96_RS21150	COG1187	pseudouridine synthase activity
NMB96_RS21155	COG5002	protein histidine kinase activity
NMB96_RS21155	COG5001	Diguanylate cyclase
NMB96_RS21165	COG1595	DNA-templated transcription, initiation
NMB96_RS21285	COG2814	Major facilitator Superfamily
NMB96_RS21290	COG0583	DNA-binding transcription factor activity
NMB96_RS21325	COG0667	Aldo Keto reductase
NMB96_RS21330	COG1309	transcriptional regulator
NMB96_RS21340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMB96_RS21355	COG0735	belongs to the Fur family
NMB96_RS21360	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMB96_RS21385	COG4452	Inner membrane protein CreD
NMB96_RS21390	COG2205	protein histidine kinase activity
NMB96_RS21395	COG0745	RESPONSE REGULATOR receiver
NMB96_RS21400	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NMB96_RS21410	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NMB96_RS21450	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NMB96_RS21455	COG1309	transcriptional regulator
NMB96_RS21480	COG2198	Histidine kinase
NMB96_RS21480	COG0643	Histidine kinase
NMB96_RS21485	COG0840	transmembrane signaling receptor activity
NMB96_RS21490	COG0835	chemotaxis
NMB96_RS21495	COG2202	Pas domain
NMB96_RS21495	COG2199	diguanylate cyclase activity
NMB96_RS21495	COG2200	EAL domain
NMB96_RS21500	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NMB96_RS21510	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMB96_RS21515	COG3590	peptidase
NMB96_RS21525	COG0588	phosphoglycerate mutase activity
NMB96_RS21530	COG1515	deoxyribonuclease V activity
NMB96_RS21535	COG1741	Belongs to the pirin family
NMB96_RS21550	COG1741	Belongs to the pirin family
NMB96_RS21555	COG1966	Carbon starvation protein
NMB96_RS21560	COG2879	small protein
NMB96_RS21570	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NMB96_RS21600	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NMB96_RS21605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NMB96_RS21610	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NMB96_RS21615	COG2080	2 iron, 2 sulfur cluster binding
NMB96_RS21620	COG5001	Diguanylate cyclase
NMB96_RS21620	COG3706	GGDEF domain
NMB96_RS21620	COG2203	Gaf domain
NMB96_RS21620	COG4251	negative regulation of phosphorylation
NMB96_RS21625	COG1228	amidohydrolase
NMB96_RS21640	COG0629	single-stranded DNA binding
NMB96_RS21645	COG0142	geranyltranstransferase activity
NMB96_RS21665	COG0527	aspartate kinase activity
NMB96_RS21670	COG0384	phenazine biosynthesis protein PhzF
NMB96_RS21675	COG0384	phenazine biosynthesis protein PhzF
NMB96_RS21685	COG1764	response to oxidative stress
NMB96_RS21695	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NMB96_RS21700	COG1678	Uncharacterized ACR, COG1678
NMB96_RS21705	COG0519	Catalyzes the synthesis of GMP from XMP
NMB96_RS21730	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NMB96_RS21745	COG4942	peptidase
NMB96_RS21770	COG1959	2 iron, 2 sulfur cluster binding
NMB96_RS21775	COG0719	Fe-S assembly protein
NMB96_RS21780	COG0396	ATPase activity
NMB96_RS21785	COG0719	Fe-S assembly protein
NMB96_RS21790	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NMB96_RS21810	COG4774	siderophore transport
NMB96_RS21815	COG3128	pkhd-type hydroxylase
NMB96_RS21840	COG1477	protein flavinylation
NMB96_RS21845	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NMB96_RS21855	COG1555	photosystem II stabilization
NMB96_RS21860	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NMB96_RS21870	COG3178	'Phosphotransferase
NMB96_RS21875	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NMB96_RS21885	COG0628	permease
NMB96_RS21905	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NMB96_RS21925	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMB96_RS21930	COG0271	Belongs to the BolA IbaG family
NMB96_RS21940	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NMB96_RS21950	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NMB96_RS21955	COG1137	ATPase activity
NMB96_RS21970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NMB96_RS21990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NMB96_RS21995	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMB96_RS22000	COG2239	Acts as a magnesium transporter
NMB96_RS22010	COG1294	oxidase, subunit
NMB96_RS22015	COG1271	oxidase subunit
NMB96_RS22025	COG1113	amino acid transport
NMB96_RS22040	COG2197	response regulator
NMB96_RS22045	COG0531	amino acid
NMB96_RS22100	COG0789	Transcriptional regulator
NMB96_RS22105	COG2814	Major facilitator Superfamily
NMB96_RS22110	COG0754	glutathionylspermidine amidase activity
NMB96_RS22135	COG1842	Phage shock protein A
NMB96_RS22150	COG0259	pyridoxamine-phosphate oxidase activity
NMB96_RS22155	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NMB96_RS22160	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NMB96_RS22170	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NMB96_RS22195	COG0745	RESPONSE REGULATOR receiver
NMB96_RS22195	COG2205	protein histidine kinase activity
NMB96_RS22195	COG3292	Two component regulator propeller
NMB96_RS22200	COG0784	Response regulator, receiver
NMB96_RS22200	COG2198	Histidine kinase
NMB96_RS22200	COG2205	protein histidine kinase activity
NMB96_RS22205	COG2205	protein histidine kinase activity
NMB96_RS22205	COG0784	Response regulator, receiver
NMB96_RS22205	COG2198	Histidine kinase
NMB96_RS22210	COG2353	YceI-like domain
NMB96_RS22215	COG3038	cytochrome b561
NMB96_RS22225	COG1278	Cold shock
NMB96_RS22235	COG1760	l-serine dehydratase
NMB96_RS22245	COG0527	aspartate kinase activity
NMB96_RS22245	COG0460	homoserine dehydrogenase
NMB96_RS22250	COG0626	cystathionine gamma-synthase activity
NMB96_RS22255	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NMB96_RS22265	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NMB96_RS22270	COG1272	protein, Hemolysin III
NMB96_RS22275	COG2982	Protein involved in outer membrane biogenesis
NMB96_RS22285	COG0517	IMP dehydrogenase activity
NMB96_RS22285	COG0516	GMP reductase activity
NMB96_RS22290	COG0463	Glycosyl transferase, family 2
NMB96_RS22295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NMB96_RS22300	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NMB96_RS22315	COG1309	transcriptional regulator
NMB96_RS22325	COG1960	acyl-CoA dehydrogenase activity
NMB96_RS22355	COG0509	glycine decarboxylation via glycine cleavage system
NMB96_RS22360	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NMB96_RS22365	COG1742	UPF0060 membrane protein
NMB96_RS22370	COG3956	TIGRFAM MazG family protein
NMB96_RS22375	COG1218	3'(2'),5'-bisphosphate nucleotidase
NMB96_RS22380	COG0494	nUDIX hydrolase
NMB96_RS22390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NMB96_RS22395	COG0837	glucose binding
NMB96_RS22410	COG1388	LysM domain
NMB96_RS22410	COG3858	chitin binding
NMB96_RS22415	COG3525	Glycosyl hydrolase, family 20, catalytic domain
NMB96_RS22425	COG1472	Belongs to the glycosyl hydrolase 3 family
NMB96_RS22440	COG0531	amino acid
NMB96_RS22450	COG1486	melibiose metabolic process
NMB96_RS22460	COG3537	Alpha-1,2-mannosidase
NMB96_RS22495	COG1446	asparaginase
NMB96_RS22500	COG2304	oxidoreductase activity
NMB96_RS22505	COG1595	DNA-templated transcription, initiation
NMB96_RS22525	COG2201	protein-glutamate methylesterase activity
NMB96_RS22530	COG2198	Histidine kinase
NMB96_RS22530	COG0643	Histidine kinase
NMB96_RS22530	COG0784	Response regulator, receiver
NMB96_RS22535	COG0840	transmembrane signaling receptor activity
NMB96_RS22540	COG0835	chemotaxis
NMB96_RS22555	COG0189	ligase activity
NMB96_RS22565	COG1397	ADP-ribosylglycohydrolase
NMB96_RS22575	COG1199	ATP-dependent helicase activity
NMB96_RS22585	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NMB96_RS22590	COG1216	Glycosyl transferase, family 2
NMB96_RS22600	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NMB96_RS22610	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
NMB96_RS22615	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
NMB96_RS22625	COG0535	radical SAM domain protein
NMB96_RS22635	COG0837	glucose binding
NMB96_RS22645	COG1643	Atp-dependent helicase
NMB96_RS22650	COG0783	Belongs to the Dps family
NMB96_RS22655	COG0514	ATP-dependent DNA helicase (RecQ)
NMB96_RS22670	COG1187	pseudouridine synthase activity
NMB96_RS22680	COG0840	transmembrane signaling receptor activity
NMB96_RS22705	COG3920	Histidine kinase
NMB96_RS22710	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NMB96_RS22720	COG0582	viral genome integration into host DNA
NMB96_RS22740	COG4983	Phage plasmid primase, P4 family domain protein
NMB96_RS22805	COG0667	Aldo Keto reductase
NMB96_RS22810	COG0602	queuosine metabolic process
NMB96_RS22820	COG2885	chlorophyll binding
NMB96_RS22835	COG0848	biopolymer transport protein
NMB96_RS22845	COG0824	Thioesterase
NMB96_RS22850	COG2255	four-way junction helicase activity
NMB96_RS22890	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NMB96_RS22910	COG0477	Major facilitator Superfamily
NMB96_RS22935	COG2951	lytic endotransglycosylase activity
NMB96_RS22940	COG0488	(ABC) transporter
NMB96_RS22965	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NMB96_RS22965	COG4651	solute:proton antiporter activity
NMB96_RS22975	COG4772	TonB-dependent receptor
NMB96_RS22980	COG1181	Belongs to the D-alanine--D-alanine ligase family
NMB96_RS22985	COG4264	IucA IucC family
NMB96_RS22995	COG4264	IucA IucC family
NMB96_RS23000	COG0019	diaminopimelate decarboxylase activity
NMB96_RS23015	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
NMB96_RS23025	COG4206	TonB-dependent receptor
NMB96_RS23040	COG0542	response to heat
NMB96_RS23045	COG1116	anion transmembrane transporter activity
NMB96_RS23050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMB96_RS23055	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NMB96_RS23060	COG0667	Aldo Keto reductase
NMB96_RS23070	COG4771	TonB-dependent receptor
NMB96_RS23115	COG1877	trehalose-phosphatase activity
NMB96_RS23120	COG3387	PFAM Glycoside hydrolase 15-related
NMB96_RS23135	COG0840	transmembrane signaling receptor activity
NMB96_RS23140	COG3011	Protein conserved in bacteria
NMB96_RS23155	COG0564	pseudouridine synthase activity
NMB96_RS23160	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NMB96_RS23170	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NMB96_RS23170	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMB96_RS23195	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NMB96_RS23200	COG0045	succinate-CoA ligase (ADP-forming) activity
NMB96_RS23240	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NMB96_RS23265	COG0745	RESPONSE REGULATOR receiver
NMB96_RS23270	COG0189	ligase activity
NMB96_RS23320	COG0840	transmembrane signaling receptor activity
NMB96_RS23330	COG1238	metal cluster binding
NMB96_RS23335	COG0583	DNA-binding transcription factor activity