##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2086678v1 #!genome-build-accession NCBI_Assembly:GCF_020866785.1 #!annotation-date 12/08/2022 09:25:24 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP086372.1 1 4963479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=64187 NZ_CP086372.1 RefSeq region 1 4963479 . + . ID=NZ_CP086372.1:1..4963479;Dbxref=taxon:64187;Is_circular=true;Name=ANONYMOUS;collected-by=Yong-Qiang He;collection-date=2020-07-07;country=China:Guangxi;gbkey=Src;genome=chromosome;isolation-source=infected rice leaf;lat-lon=22.84 N 108.33 E;mol_type=genomic DNA;nat-host=Oryza sativa;pathovar=oryzae;strain=GXO2001 NZ_CP086372.1 RefSeq pseudogene 1739 2115 . + . ID=gene-LNP58_RS00010;Name=LNP58_RS00010;end_range=2115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00010;old_locus_tag=LNP58_00010;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1739 2115 . + 0 ID=cds-LNP58_RS00010;Parent=gene-LNP58_RS00010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2115,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LNP58_RS00010;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2163 2766 . - . ID=gene-LNP58_RS00015;Name=LNP58_RS00015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00015;old_locus_tag=LNP58_00015;pseudo=true NZ_CP086372.1 Protein Homology CDS 2163 2766 . - 0 ID=cds-LNP58_RS00015;Parent=gene-LNP58_RS00015;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611849.1;locus_tag=LNP58_RS00015;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2857 3057 . + . ID=gene-LNP58_RS00020;Name=LNP58_RS00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00020;old_locus_tag=LNP58_00020;partial=true;pseudo=true;start_range=.,2857 NZ_CP086372.1 Protein Homology CDS 2857 3057 . + 0 ID=cds-LNP58_RS00020;Parent=gene-LNP58_RS00020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157844.1;locus_tag=LNP58_RS00020;partial=true;product=MFS transporter;pseudo=true;start_range=.,2857;transl_table=11 NZ_CP086372.1 RefSeq gene 3082 6663 . - . ID=gene-LNP58_RS00025;Name=LNP58_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00025;old_locus_tag=LNP58_00025 NZ_CP086372.1 Protein Homology CDS 3082 6663 . - 0 ID=cds-WP_103057214.1;Parent=gene-LNP58_RS00025;Dbxref=Genbank:WP_103057214.1;Name=WP_103057214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437751.1;locus_tag=LNP58_RS00025;product=ATP-binding protein;protein_id=WP_103057214.1;transl_table=11 NZ_CP086372.1 RefSeq gene 6729 10286 . - . ID=gene-LNP58_RS00030;Name=LNP58_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00030;old_locus_tag=LNP58_00030 NZ_CP086372.1 Protein Homology CDS 6729 10286 . - 0 ID=cds-WP_042464720.1;Parent=gene-LNP58_RS00030;Dbxref=Genbank:WP_042464720.1;Name=WP_042464720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445273.1;locus_tag=LNP58_RS00030;product=ATP-binding protein;protein_id=WP_042464720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 10582 14157 . - . ID=gene-LNP58_RS00035;Name=LNP58_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00035;old_locus_tag=LNP58_00035 NZ_CP086372.1 Protein Homology CDS 10582 14157 . - 0 ID=cds-WP_011408232.1;Parent=gene-LNP58_RS00035;Dbxref=Genbank:WP_011408232.1;Name=WP_011408232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167533.1;locus_tag=LNP58_RS00035;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011408232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 14254 14916 . + . ID=gene-LNP58_RS00040;Name=LNP58_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00040;old_locus_tag=LNP58_00040 NZ_CP086372.1 Protein Homology CDS 14254 14916 . + 0 ID=cds-WP_011258575.1;Parent=gene-LNP58_RS00040;Dbxref=Genbank:WP_011258575.1;Name=WP_011258575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967939.1;locus_tag=LNP58_RS00040;product=YceI family protein;protein_id=WP_011258575.1;transl_table=11 NZ_CP086372.1 RefSeq gene 14913 15476 . + . ID=gene-LNP58_RS00045;Name=LNP58_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00045;old_locus_tag=LNP58_00045 NZ_CP086372.1 Protein Homology CDS 14913 15476 . + 0 ID=cds-WP_011258574.1;Parent=gene-LNP58_RS00045;Dbxref=Genbank:WP_011258574.1;Name=WP_011258574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157851.1;locus_tag=LNP58_RS00045;product=cytochrome b;protein_id=WP_011258574.1;transl_table=11 NZ_CP086372.1 RefSeq gene 15486 16055 . + . ID=gene-LNP58_RS00050;Name=LNP58_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00050;old_locus_tag=LNP58_00050 NZ_CP086372.1 Protein Homology CDS 15486 16055 . + 0 ID=cds-WP_011258573.1;Parent=gene-LNP58_RS00050;Dbxref=Genbank:WP_011258573.1;Name=WP_011258573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504047.1;locus_tag=LNP58_RS00050;product=YceI family protein;protein_id=WP_011258573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 16497 16769 . + . ID=gene-LNP58_RS00055;Name=LNP58_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00055;old_locus_tag=LNP58_00055 NZ_CP086372.1 Protein Homology CDS 16497 16769 . + 0 ID=cds-WP_228329744.1;Parent=gene-LNP58_RS00055;Dbxref=Genbank:WP_228329744.1;Name=WP_228329744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017691.2;locus_tag=LNP58_RS00055;product=excalibur calcium-binding domain-containing protein;protein_id=WP_228329744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 16855 17088 . - . ID=gene-LNP58_RS00060;Name=LNP58_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00060;old_locus_tag=LNP58_00060 NZ_CP086372.1 Protein Homology CDS 16855 17088 . - 0 ID=cds-WP_011408231.1;Parent=gene-LNP58_RS00060;Dbxref=Genbank:WP_011408231.1;Name=WP_011408231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408231.1;locus_tag=LNP58_RS00060;product=glutaredoxin family protein;protein_id=WP_011408231.1;transl_table=11 NZ_CP086372.1 RefSeq gene 17176 18558 . + . ID=gene-LNP58_RS00065;Name=LNP58_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00065;old_locus_tag=LNP58_00065 NZ_CP086372.1 Protein Homology CDS 17176 18558 . + 0 ID=cds-WP_011258570.1;Parent=gene-LNP58_RS00065;Dbxref=Genbank:WP_011258570.1;Name=WP_011258570.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161485.1;locus_tag=LNP58_RS00065;product=L-serine ammonia-lyase;protein_id=WP_011258570.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 19234 20329 . - . ID=gene-LNP58_RS00070;Name=LNP58_RS00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00070;old_locus_tag=LNP58_00070;pseudo=true NZ_CP086372.1 Protein Homology CDS 19234 20329 . - 0 ID=cds-LNP58_RS00070;Parent=gene-LNP58_RS00070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967946.1;locus_tag=LNP58_RS00070;product=homoserine dehydrogenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 20326 21543 . - . ID=gene-LNP58_RS00075;Name=LNP58_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00075;old_locus_tag=LNP58_00075 NZ_CP086372.1 Protein Homology CDS 20326 21543 . - 0 ID=cds-WP_011408230.1;Parent=gene-LNP58_RS00075;Dbxref=Genbank:WP_011408230.1;Name=WP_011408230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157856.1;locus_tag=LNP58_RS00075;product=O-succinylhomoserine (thiol)-lyase;protein_id=WP_011408230.1;transl_table=11 NZ_CP086372.1 RefSeq gene 21540 22571 . - . ID=gene-LNP58_RS00080;Name=LNP58_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00080;old_locus_tag=LNP58_00080 NZ_CP086372.1 Protein Homology CDS 21540 22571 . - 0 ID=cds-WP_044756927.1;Parent=gene-LNP58_RS00080;Dbxref=Genbank:WP_044756927.1;Name=WP_044756927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348198.1;locus_tag=LNP58_RS00080;product=homoserine O-succinyltransferase;protein_id=WP_044756927.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 22642 22761 . - . ID=id-NZ_CP086372.1:22642..22761;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq gene 22890 23789 . + . ID=gene-LNP58_RS00085;Name=LNP58_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00085;old_locus_tag=LNP58_00085 NZ_CP086372.1 Protein Homology CDS 22890 23789 . + 0 ID=cds-WP_042464717.1;Parent=gene-LNP58_RS00085;Dbxref=Genbank:WP_042464717.1;Name=WP_042464717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348199.1;locus_tag=LNP58_RS00085;product=M23 family metallopeptidase;protein_id=WP_042464717.1;transl_table=11 NZ_CP086372.1 RefSeq gene 23922 25526 . + . ID=gene-LNP58_RS00090;Name=LNP58_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00090;old_locus_tag=LNP58_00090 NZ_CP086372.1 Protein Homology CDS 23922 25526 . + 0 ID=cds-WP_011408227.1;Parent=gene-LNP58_RS00090;Dbxref=Genbank:WP_011408227.1;Name=WP_011408227.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157859.1;locus_tag=LNP58_RS00090;product=peptide chain release factor 3;protein_id=WP_011408227.1;transl_table=11 NZ_CP086372.1 RefSeq gene 25602 26246 . + . ID=gene-LNP58_RS00095;Name=LNP58_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00095;old_locus_tag=LNP58_00095 NZ_CP086372.1 Protein Homology CDS 25602 26246 . + 0 ID=cds-WP_011258564.1;Parent=gene-LNP58_RS00095;Dbxref=Genbank:WP_011258564.1;Name=WP_011258564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301897.1;locus_tag=LNP58_RS00095;product=hemolysin III family protein;protein_id=WP_011258564.1;transl_table=11 NZ_CP086372.1 RefSeq gene 26305 26427 . + . ID=gene-LNP58_RS00100;Name=LNP58_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00100;old_locus_tag=LNP58_00100 NZ_CP086372.1 GeneMarkS-2+ CDS 26305 26427 . + 0 ID=cds-WP_012445281.1;Parent=gene-LNP58_RS00100;Dbxref=Genbank:WP_012445281.1;Name=WP_012445281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00100;product=hypothetical protein;protein_id=WP_012445281.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 26434 27257 . + . ID=gene-LNP58_RS00105;Name=LNP58_RS00105;end_range=27257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00105;old_locus_tag=LNP58_00105;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 26434 27257 . + 0 ID=cds-LNP58_RS00105;Parent=gene-LNP58_RS00105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508524.1;locus_tag=LNP58_RS00105;partial=true;product=AsmA family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 27257 27598 . + . ID=gene-LNP58_RS00110;Name=LNP58_RS00110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00110;old_locus_tag=LNP58_00110;partial=true;pseudo=true;start_range=.,27257 NZ_CP086372.1 Protein Homology CDS 27257 27598 . + 0 ID=cds-LNP58_RS00110;Parent=gene-LNP58_RS00110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS00110;partial=true;product=transposase;pseudo=true;start_range=.,27257;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 27730 28158 . - . ID=gene-LNP58_RS00115;Name=LNP58_RS00115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00115;old_locus_tag=LNP58_00115;pseudo=true NZ_CP086372.1 Protein Homology CDS 27730 28158 . - 0 ID=cds-LNP58_RS00115;Parent=gene-LNP58_RS00115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090742.1;locus_tag=LNP58_RS00115;product=CBS domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 28118 29164 . - . ID=gene-LNP58_RS00120;Name=LNP58_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00120;old_locus_tag=LNP58_00120 NZ_CP086372.1 Protein Homology CDS 28118 29164 . - 0 ID=cds-WP_011408225.1;Parent=gene-LNP58_RS00120;Dbxref=Genbank:WP_011408225.1;Name=WP_011408225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157863.1;locus_tag=LNP58_RS00120;product=glycosyltransferase family 2 protein;protein_id=WP_011408225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 29167 29904 . - . ID=gene-LNP58_RS00125;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LNP58_RS00125;old_locus_tag=LNP58_00125 NZ_CP086372.1 Protein Homology CDS 29167 29904 . - 0 ID=cds-WP_011258559.1;Parent=gene-LNP58_RS00125;Dbxref=Genbank:WP_011258559.1;Name=WP_011258559.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037989.1;locus_tag=LNP58_RS00125;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_011258559.1;transl_table=11 NZ_CP086372.1 RefSeq gene 29979 30869 . + . ID=gene-LNP58_RS00130;Name=LNP58_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00130;old_locus_tag=LNP58_00130 NZ_CP086372.1 Protein Homology CDS 29979 30869 . + 0 ID=cds-WP_011408224.1;Parent=gene-LNP58_RS00130;Dbxref=Genbank:WP_011408224.1;Name=WP_011408224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368716.1;locus_tag=LNP58_RS00130;product=Hsp33 family molecular chaperone HslO;protein_id=WP_011408224.1;transl_table=11 NZ_CP086372.1 RefSeq gene 31023 31859 . + . ID=gene-LNP58_RS00135;Name=LNP58_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00135;old_locus_tag=LNP58_00135 NZ_CP086372.1 Protein Homology CDS 31023 31859 . + 0 ID=cds-WP_027703402.1;Parent=gene-LNP58_RS00135;Dbxref=Genbank:WP_027703402.1;Name=WP_027703402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572079.1;locus_tag=LNP58_RS00135;product=hypothetical protein;protein_id=WP_027703402.1;transl_table=11 NZ_CP086372.1 RefSeq gene 32107 35016 . + . ID=gene-LNP58_RS00140;Name=LNP58_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00140;old_locus_tag=LNP58_00140 NZ_CP086372.1 Protein Homology CDS 32107 35016 . + 0 ID=cds-WP_011408223.1;Parent=gene-LNP58_RS00140;Dbxref=Genbank:WP_011408223.1;Name=WP_011408223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258556.1;locus_tag=LNP58_RS00140;product=TonB-dependent receptor;protein_id=WP_011408223.1;transl_table=11 NZ_CP086372.1 RefSeq gene 35125 35733 . - . ID=gene-LNP58_RS00145;Name=LNP58_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00145;old_locus_tag=LNP58_00145 NZ_CP086372.1 Protein Homology CDS 35125 35733 . - 0 ID=cds-WP_011408222.1;Parent=gene-LNP58_RS00145;Dbxref=Genbank:WP_011408222.1;Name=WP_011408222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988563.1;locus_tag=LNP58_RS00145;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011408222.1;transl_table=11 NZ_CP086372.1 RefSeq gene 35870 36763 . + . ID=gene-LNP58_RS00150;Name=LNP58_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00150;old_locus_tag=LNP58_00150 NZ_CP086372.1 Protein Homology CDS 35870 36763 . + 0 ID=cds-WP_027703403.1;Parent=gene-LNP58_RS00150;Dbxref=Genbank:WP_027703403.1;Name=WP_027703403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166286.1;locus_tag=LNP58_RS00150;product=alpha/beta hydrolase;protein_id=WP_027703403.1;transl_table=11 NZ_CP086372.1 RefSeq gene 36760 39234 . + . ID=gene-LNP58_RS00155;Name=LNP58_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00155;old_locus_tag=LNP58_00155 NZ_CP086372.1 Protein Homology CDS 36760 39234 . + 0 ID=cds-WP_011408220.1;Parent=gene-LNP58_RS00155;Dbxref=Genbank:WP_011408220.1;Name=WP_011408220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090746.1;locus_tag=LNP58_RS00155;product=acyl-CoA dehydrogenase;protein_id=WP_011408220.1;transl_table=11 NZ_CP086372.1 RefSeq gene 39629 39982 . - . ID=gene-LNP58_RS00160;Name=LNP58_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00160;old_locus_tag=LNP58_00160 NZ_CP086372.1 Protein Homology CDS 39629 39982 . - 0 ID=cds-WP_011408219.1;Parent=gene-LNP58_RS00160;Dbxref=Genbank:WP_011408219.1;Name=WP_011408219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302742.1;locus_tag=LNP58_RS00160;product=DUF1304 domain-containing protein;protein_id=WP_011408219.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 40270 41628 . - . ID=gene-LNP58_RS00165;Name=LNP58_RS00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00165;old_locus_tag=LNP58_00165;partial=true;pseudo=true;start_range=.,40270 NZ_CP086372.1 Protein Homology CDS 40270 41628 . - 0 ID=cds-LNP58_RS00165;Parent=gene-LNP58_RS00165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849238.1;locus_tag=LNP58_RS00165;partial=true;product=MFS transporter;pseudo=true;start_range=.,40270;transl_table=11 NZ_CP086372.1 RefSeq gene 41707 41880 . - . ID=gene-LNP58_RS00170;Name=LNP58_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00170;old_locus_tag=LNP58_00170 NZ_CP086372.1 GeneMarkS-2+ CDS 41707 41880 . - 0 ID=cds-WP_153303308.1;Parent=gene-LNP58_RS00170;Dbxref=Genbank:WP_153303308.1;Name=WP_153303308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00170;product=hypothetical protein;protein_id=WP_153303308.1;transl_table=11 NZ_CP086372.1 RefSeq gene 41993 43336 . + . ID=gene-LNP58_RS00175;Name=LNP58_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00175;old_locus_tag=LNP58_00175 NZ_CP086372.1 Protein Homology CDS 41993 43336 . + 0 ID=cds-WP_012445290.1;Parent=gene-LNP58_RS00175;Dbxref=Genbank:WP_012445290.1;Name=WP_012445290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504072.1;locus_tag=LNP58_RS00175;product=serine hydrolase domain-containing protein;protein_id=WP_012445290.1;transl_table=11 NZ_CP086372.1 RefSeq gene 44275 44694 . + . ID=gene-LNP58_RS00180;Name=LNP58_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00180;old_locus_tag=LNP58_00180 NZ_CP086372.1 Protein Homology CDS 44275 44694 . + 0 ID=cds-WP_027703405.1;Parent=gene-LNP58_RS00180;Dbxref=Genbank:WP_027703405.1;Name=WP_027703405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116305.1;locus_tag=LNP58_RS00180;product=hypothetical protein;protein_id=WP_027703405.1;transl_table=11 NZ_CP086372.1 RefSeq gene 45048 45323 . + . ID=gene-LNP58_RS00185;Name=LNP58_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00185;old_locus_tag=LNP58_00185 NZ_CP086372.1 GeneMarkS-2+ CDS 45048 45323 . + 0 ID=cds-WP_082322925.1;Parent=gene-LNP58_RS00185;Dbxref=Genbank:WP_082322925.1;Name=WP_082322925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00185;product=hypothetical protein;protein_id=WP_082322925.1;transl_table=11 NZ_CP086372.1 RefSeq gene 45705 46100 . - . ID=gene-LNP58_RS00190;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LNP58_RS00190;old_locus_tag=LNP58_00190 NZ_CP086372.1 Protein Homology CDS 45705 46100 . - 0 ID=cds-WP_011258549.1;Parent=gene-LNP58_RS00190;Dbxref=Genbank:WP_011258549.1;Name=WP_011258549.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368686.1;locus_tag=LNP58_RS00190;product=glycine cleavage system protein GcvH;protein_id=WP_011258549.1;transl_table=11 NZ_CP086372.1 RefSeq gene 46237 47346 . - . ID=gene-LNP58_RS00195;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LNP58_RS00195;old_locus_tag=LNP58_00195 NZ_CP086372.1 Protein Homology CDS 46237 47346 . - 0 ID=cds-WP_069964920.1;Parent=gene-LNP58_RS00195;Dbxref=Genbank:WP_069964920.1;Name=WP_069964920.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931494.1;locus_tag=LNP58_RS00195;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_069964920.1;transl_table=11 NZ_CP086372.1 RefSeq gene 47519 47953 . - . ID=gene-LNP58_RS00200;Name=LNP58_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00200;old_locus_tag=LNP58_00200 NZ_CP086372.1 Protein Homology CDS 47519 47953 . - 0 ID=cds-WP_075242176.1;Parent=gene-LNP58_RS00200;Dbxref=Genbank:WP_075242176.1;Name=WP_075242176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113316.1;locus_tag=LNP58_RS00200;product=NfeD family protein;protein_id=WP_075242176.1;transl_table=11 NZ_CP086372.1 RefSeq gene 47957 48922 . - . ID=gene-LNP58_RS00205;Name=LNP58_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00205;old_locus_tag=LNP58_00205 NZ_CP086372.1 Protein Homology CDS 47957 48922 . - 0 ID=cds-WP_075242177.1;Parent=gene-LNP58_RS00205;Dbxref=Genbank:WP_075242177.1;Name=WP_075242177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237420.1;locus_tag=LNP58_RS00205;product=SPFH/Band 7/PHB domain protein;protein_id=WP_075242177.1;transl_table=11 NZ_CP086372.1 RefSeq gene 49051 49127 . + . ID=gene-LNP58_RS00210;Name=LNP58_RS00210;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS00210;old_locus_tag=LNP58_00210 NZ_CP086372.1 cmsearch ncRNA 49051 49127 . + . ID=rna-LNP58_RS00210;Parent=gene-LNP58_RS00210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00210;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 49051 49127 . + . ID=exon-LNP58_RS00210-1;Parent=rna-LNP58_RS00210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00210;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 49220 49557 . - . ID=gene-LNP58_RS00215;Name=LNP58_RS00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00215;old_locus_tag=LNP58_00215;pseudo=true NZ_CP086372.1 Protein Homology CDS 49220 49557 . - 0 ID=cds-LNP58_RS00215;Parent=gene-LNP58_RS00215;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482423.1;locus_tag=LNP58_RS00215;product=YnfA family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 49554 50573 . - . ID=gene-LNP58_RS00220;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LNP58_RS00220;old_locus_tag=LNP58_00220 NZ_CP086372.1 Protein Homology CDS 49554 50573 . - 0 ID=cds-WP_011408214.1;Parent=gene-LNP58_RS00220;Dbxref=Genbank:WP_011408214.1;Name=WP_011408214.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851467.1;locus_tag=LNP58_RS00220;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_011408214.1;transl_table=11 NZ_CP086372.1 RefSeq gene 50816 51616 . - . ID=gene-LNP58_RS00225;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LNP58_RS00225;old_locus_tag=LNP58_00225 NZ_CP086372.1 Protein Homology CDS 50816 51616 . - 0 ID=cds-WP_011258542.1;Parent=gene-LNP58_RS00225;Dbxref=Genbank:WP_011258542.1;Name=WP_011258542.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811298.1;locus_tag=LNP58_RS00225;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_011258542.1;transl_table=11 NZ_CP086372.1 RefSeq gene 51613 52161 . - . ID=gene-LNP58_RS00230;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LNP58_RS00230;old_locus_tag=LNP58_00230 NZ_CP086372.1 Protein Homology CDS 51613 52161 . - 0 ID=cds-WP_011408213.1;Parent=gene-LNP58_RS00230;Dbxref=Genbank:WP_011408213.1;Name=WP_011408213.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090754.1;locus_tag=LNP58_RS00230;product=ADP compounds hydrolase NudE;protein_id=WP_011408213.1;transl_table=11 NZ_CP086372.1 RefSeq gene 52203 53621 . + . ID=gene-LNP58_RS00235;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LNP58_RS00235;old_locus_tag=LNP58_00235 NZ_CP086372.1 Protein Homology CDS 52203 53621 . + 0 ID=cds-WP_011258541.1;Parent=gene-LNP58_RS00235;Dbxref=Genbank:WP_011258541.1;Name=WP_011258541.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851465.1;locus_tag=LNP58_RS00235;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_011258541.1;transl_table=11 NZ_CP086372.1 RefSeq gene 53612 54346 . + . ID=gene-LNP58_RS00240;Name=LNP58_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00240;old_locus_tag=LNP58_00240 NZ_CP086372.1 Protein Homology CDS 53612 54346 . + 0 ID=cds-WP_011258540.1;Parent=gene-LNP58_RS00240;Dbxref=Genbank:WP_011258540.1;Name=WP_011258540.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931477.1;locus_tag=LNP58_RS00240;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_011258540.1;transl_table=11 NZ_CP086372.1 RefSeq gene 54648 55646 . - . ID=gene-LNP58_RS00245;Name=LNP58_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00245;old_locus_tag=LNP58_00245 NZ_CP086372.1 Protein Homology CDS 54648 55646 . - 0 ID=cds-WP_027703406.1;Parent=gene-LNP58_RS00245;Dbxref=Genbank:WP_027703406.1;Name=WP_027703406.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988601.1;locus_tag=LNP58_RS00245;product=glucokinase;protein_id=WP_027703406.1;transl_table=11 NZ_CP086372.1 RefSeq gene 56368 59061 . + . ID=gene-LNP58_RS00250;Name=LNP58_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00250;old_locus_tag=LNP58_00250 NZ_CP086372.1 Protein Homology CDS 56368 59061 . + 0 ID=cds-WP_069963845.1;Parent=gene-LNP58_RS00250;Dbxref=Genbank:WP_069963845.1;Name=WP_069963845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164668.1;locus_tag=LNP58_RS00250;product=TonB-dependent receptor;protein_id=WP_069963845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 59269 60954 . + . ID=gene-LNP58_RS00255;Name=LNP58_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00255;old_locus_tag=LNP58_00255 NZ_CP086372.1 Protein Homology CDS 59269 60954 . + 0 ID=cds-WP_044756938.1;Parent=gene-LNP58_RS00255;Dbxref=Genbank:WP_044756938.1;Name=WP_044756938.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161486.1;locus_tag=LNP58_RS00255;product=alpha-L-fucosidase;protein_id=WP_044756938.1;transl_table=11 NZ_CP086372.1 RefSeq gene 60958 62025 . + . ID=gene-LNP58_RS00260;Name=LNP58_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00260;old_locus_tag=LNP58_00260 NZ_CP086372.1 Protein Homology CDS 60958 62025 . + 0 ID=cds-WP_011258536.1;Parent=gene-LNP58_RS00260;Dbxref=Genbank:WP_011258536.1;Name=WP_011258536.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090759.1;locus_tag=LNP58_RS00260;product=glycosyl hydrolase family 18 protein;protein_id=WP_011258536.1;transl_table=11 NZ_CP086372.1 RefSeq gene 62087 62160 . + . ID=gene-LNP58_RS00265;Name=LNP58_RS00265;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS00265;old_locus_tag=LNP58_00265 NZ_CP086372.1 cmsearch ncRNA 62087 62160 . + . ID=rna-LNP58_RS00265;Parent=gene-LNP58_RS00265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00265;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 62087 62160 . + . ID=exon-LNP58_RS00265-1;Parent=rna-LNP58_RS00265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00265;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 62423 64873 . + . ID=gene-LNP58_RS00270;Name=LNP58_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00270;old_locus_tag=LNP58_00270 NZ_CP086372.1 Protein Homology CDS 62423 64873 . + 0 ID=cds-WP_042464709.1;Parent=gene-LNP58_RS00270;Dbxref=Genbank:WP_042464709.1;Name=WP_042464709.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118915.1;locus_tag=LNP58_RS00270;product=family 20 glycosylhydrolase;protein_id=WP_042464709.1;transl_table=11 NZ_CP086372.1 RefSeq gene 64895 67576 . + . ID=gene-LNP58_RS00275;Name=LNP58_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00275;old_locus_tag=LNP58_00275 NZ_CP086372.1 Protein Homology CDS 64895 67576 . + 0 ID=cds-WP_011408206.1;Parent=gene-LNP58_RS00275;Dbxref=Genbank:WP_011408206.1;Name=WP_011408206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504091.1;locus_tag=LNP58_RS00275;product=glycoside hydrolase family 2 protein;protein_id=WP_011408206.1;transl_table=11 NZ_CP086372.1 RefSeq gene 67781 70450 . + . ID=gene-LNP58_RS00280;Name=LNP58_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00280;old_locus_tag=LNP58_00280 NZ_CP086372.1 Protein Homology CDS 67781 70450 . + 0 ID=cds-WP_011408205.1;Parent=gene-LNP58_RS00280;Dbxref=Genbank:WP_011408205.1;Name=WP_011408205.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155574.1;locus_tag=LNP58_RS00280;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_011408205.1;transl_table=11 NZ_CP086372.1 RefSeq gene 70596 72656 . - . ID=gene-LNP58_RS00285;Name=LNP58_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00285;old_locus_tag=LNP58_00285 NZ_CP086372.1 Protein Homology CDS 70596 72656 . - 0 ID=cds-WP_229001930.1;Parent=gene-LNP58_RS00285;Dbxref=Genbank:WP_229001930.1;Name=WP_229001930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370257.1;locus_tag=LNP58_RS00285;product=peptidase domain-containing ABC transporter;protein_id=WP_229001930.1;transl_table=11 NZ_CP086372.1 RefSeq gene 72634 72774 . + . ID=gene-LNP58_RS00290;Name=LNP58_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00290;old_locus_tag=LNP58_00290 NZ_CP086372.1 GeneMarkS-2+ CDS 72634 72774 . + 0 ID=cds-WP_228329772.1;Parent=gene-LNP58_RS00290;Dbxref=Genbank:WP_228329772.1;Name=WP_228329772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00290;product=hypothetical protein;protein_id=WP_228329772.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 72819 74055 . + . ID=gene-LNP58_RS00295;Name=LNP58_RS00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00295;old_locus_tag=LNP58_00295;pseudo=true NZ_CP086372.1 Protein Homology CDS 72819 74055 . + 0 ID=cds-LNP58_RS00295;Parent=gene-LNP58_RS00295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS00295;product=ISL3-like element ISXoo13 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 74059 74253 . - . ID=gene-LNP58_RS00300;Name=LNP58_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00300;old_locus_tag=LNP58_00300 NZ_CP086372.1 Protein Homology CDS 74059 74253 . - 0 ID=cds-WP_256722694.1;Parent=gene-LNP58_RS00300;Dbxref=Genbank:WP_256722694.1;Name=WP_256722694.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=LNP58_RS00300;product=rhomboid family intramembrane serine protease;protein_id=WP_256722694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 74432 74614 . + . ID=gene-LNP58_RS00305;Name=LNP58_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00305;old_locus_tag=LNP58_00305 NZ_CP086372.1 GeneMarkS-2+ CDS 74432 74614 . + 0 ID=cds-WP_042464706.1;Parent=gene-LNP58_RS00305;Dbxref=Genbank:WP_042464706.1;Name=WP_042464706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00305;product=hypothetical protein;protein_id=WP_042464706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 74850 75443 . - . ID=gene-LNP58_RS00310;Name=LNP58_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00310;old_locus_tag=LNP58_00310 NZ_CP086372.1 Protein Homology CDS 74850 75443 . - 0 ID=cds-WP_228329718.1;Parent=gene-LNP58_RS00310;Dbxref=Genbank:WP_228329718.1;Name=WP_228329718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370261.1;locus_tag=LNP58_RS00310;product=hypothetical protein;protein_id=WP_228329718.1;transl_table=11 NZ_CP086372.1 RefSeq gene 75518 76636 . - . ID=gene-LNP58_RS00315;Name=LNP58_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00315;old_locus_tag=LNP58_00315 NZ_CP086372.1 Protein Homology CDS 75518 76636 . - 0 ID=cds-WP_011258530.1;Parent=gene-LNP58_RS00315;Dbxref=Genbank:WP_011258530.1;Name=WP_011258530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258530.1;locus_tag=LNP58_RS00315;product=hypothetical protein;protein_id=WP_011258530.1;transl_table=11 NZ_CP086372.1 RefSeq gene 76715 76885 . - . ID=gene-LNP58_RS00320;Name=LNP58_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00320;old_locus_tag=LNP58_00320 NZ_CP086372.1 Protein Homology CDS 76715 76885 . - 0 ID=cds-WP_162866903.1;Parent=gene-LNP58_RS00320;Dbxref=Genbank:WP_162866903.1;Name=WP_162866903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005419266.1;locus_tag=LNP58_RS00320;product=hypothetical protein;protein_id=WP_162866903.1;transl_table=11 NZ_CP086372.1 RefSeq gene 77331 78575 . - . ID=gene-LNP58_RS00325;Name=LNP58_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00325;old_locus_tag=LNP58_00325 NZ_CP086372.1 Protein Homology CDS 77331 78575 . - 0 ID=cds-WP_011408202.1;Parent=gene-LNP58_RS00325;Dbxref=Genbank:WP_011408202.1;Name=WP_011408202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445310.1;locus_tag=LNP58_RS00325;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_011408202.1;transl_table=11 NZ_CP086372.1 RefSeq gene 78572 78850 . - . ID=gene-LNP58_RS00330;Name=LNP58_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00330;old_locus_tag=LNP58_00330 NZ_CP086372.1 Protein Homology CDS 78572 78850 . - 0 ID=cds-WP_012445311.1;Parent=gene-LNP58_RS00330;Dbxref=Genbank:WP_012445311.1;Name=WP_012445311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113105.1;locus_tag=LNP58_RS00330;product=hypothetical protein;protein_id=WP_012445311.1;transl_table=11 NZ_CP086372.1 RefSeq gene 78928 79329 . - . ID=gene-LNP58_RS00335;Name=LNP58_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00335;old_locus_tag=LNP58_00335 NZ_CP086372.1 Protein Homology CDS 78928 79329 . - 0 ID=cds-WP_011408200.1;Parent=gene-LNP58_RS00335;Dbxref=Genbank:WP_011408200.1;Name=WP_011408200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365311.1;locus_tag=LNP58_RS00335;product=hypothetical protein;protein_id=WP_011408200.1;transl_table=11 NZ_CP086372.1 RefSeq gene 79383 79598 . - . ID=gene-LNP58_RS00340;Name=LNP58_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00340;old_locus_tag=LNP58_00340 NZ_CP086372.1 Protein Homology CDS 79383 79598 . - 0 ID=cds-WP_228329716.1;Parent=gene-LNP58_RS00340;Dbxref=Genbank:WP_228329716.1;Name=WP_228329716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376789.1;locus_tag=LNP58_RS00340;product=hypothetical protein;protein_id=WP_228329716.1;transl_table=11 NZ_CP086372.1 RefSeq gene 79612 79983 . - . ID=gene-LNP58_RS00345;Name=LNP58_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00345;old_locus_tag=LNP58_00345 NZ_CP086372.1 Protein Homology CDS 79612 79983 . - 0 ID=cds-WP_011408199.1;Parent=gene-LNP58_RS00345;Dbxref=Genbank:WP_011408199.1;Name=WP_011408199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118058.1;locus_tag=LNP58_RS00345;product=biotin/lipoyl-binding protein;protein_id=WP_011408199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 80428 80730 . - . ID=gene-LNP58_RS00350;Name=LNP58_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00350;old_locus_tag=LNP58_00350 NZ_CP086372.1 GeneMarkS-2+ CDS 80428 80730 . - 0 ID=cds-WP_011408198.1;Parent=gene-LNP58_RS00350;Dbxref=Genbank:WP_011408198.1;Name=WP_011408198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00350;product=hypothetical protein;protein_id=WP_011408198.1;transl_table=11 NZ_CP086372.1 RefSeq gene 80967 82430 . + . ID=gene-LNP58_RS00355;Name=LNP58_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00355;old_locus_tag=LNP58_00355 NZ_CP086372.1 Protein Homology CDS 80967 82430 . + 0 ID=cds-WP_011258527.1;Parent=gene-LNP58_RS00355;Dbxref=Genbank:WP_011258527.1;Name=WP_011258527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813906.1;locus_tag=LNP58_RS00355;product=glycoside hydrolase family 125 protein;protein_id=WP_011258527.1;transl_table=11 NZ_CP086372.1 RefSeq gene 82566 84908 . + . ID=gene-LNP58_RS00360;Name=LNP58_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00360;old_locus_tag=LNP58_00360 NZ_CP086372.1 Protein Homology CDS 82566 84908 . + 0 ID=cds-WP_011408197.1;Parent=gene-LNP58_RS00360;Dbxref=Genbank:WP_011408197.1;Name=WP_011408197.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155572.1;locus_tag=LNP58_RS00360;product=GH92 family glycosyl hydrolase;protein_id=WP_011408197.1;transl_table=11 NZ_CP086372.1 RefSeq gene 84935 85011 . - . ID=gene-LNP58_RS00365;Name=LNP58_RS00365;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS00365;old_locus_tag=LNP58_00365 NZ_CP086372.1 cmsearch ncRNA 84935 85011 . - . ID=rna-LNP58_RS00365;Parent=gene-LNP58_RS00365;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00365;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 84935 85011 . - . ID=exon-LNP58_RS00365-1;Parent=rna-LNP58_RS00365;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00365;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 85188 87029 . + . ID=gene-LNP58_RS00370;Name=LNP58_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00370;old_locus_tag=LNP58_00370 NZ_CP086372.1 Protein Homology CDS 85188 87029 . + 0 ID=cds-WP_011408196.1;Parent=gene-LNP58_RS00370;Dbxref=Genbank:WP_011408196.1;Name=WP_011408196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173652.1;locus_tag=LNP58_RS00370;product=beta-galactosidase;protein_id=WP_011408196.1;transl_table=11 NZ_CP086372.1 RefSeq gene 87079 89721 . - . ID=gene-LNP58_RS00375;Name=xopK;gbkey=Gene;gene=xopK;gene_biotype=protein_coding;locus_tag=LNP58_RS00375;old_locus_tag=LNP58_00375 NZ_CP086372.1 Protein Homology CDS 87079 89721 . - 0 ID=cds-WP_267910886.1;Parent=gene-LNP58_RS00375;Dbxref=Genbank:WP_267910886.1;Name=WP_267910886.1;Ontology_term=GO:0030254;gbkey=CDS;gene=xopK;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304367.1;locus_tag=LNP58_RS00375;product=type III secretion system effector protein XopK;protein_id=WP_267910886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 90228 90428 . + . ID=gene-LNP58_RS00380;Name=LNP58_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00380;old_locus_tag=LNP58_00380 NZ_CP086372.1 Protein Homology CDS 90228 90428 . + 0 ID=cds-WP_011408193.1;Parent=gene-LNP58_RS00380;Dbxref=Genbank:WP_011408193.1;Name=WP_011408193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408193.1;locus_tag=LNP58_RS00380;product=hypothetical protein;protein_id=WP_011408193.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 90486 90707 . - . ID=gene-LNP58_RS00385;Name=LNP58_RS00385;end_range=90707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00385;old_locus_tag=LNP58_00385;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 90486 90707 . - 0 ID=cds-LNP58_RS00385;Parent=gene-LNP58_RS00385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=90707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155568.1;locus_tag=LNP58_RS00385;partial=true;product=RebB family R body protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 90771 92006 . + . ID=gene-LNP58_RS00390;Name=LNP58_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00390;old_locus_tag=LNP58_00390 NZ_CP086372.1 Protein Homology CDS 90771 92006 . + 0 ID=cds-WP_011408191.1;Parent=gene-LNP58_RS00390;Dbxref=Genbank:WP_011408191.1;Name=WP_011408191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS00390;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011408191.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 92019 92126 . - . ID=gene-LNP58_RS00395;Name=LNP58_RS00395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00395;old_locus_tag=LNP58_00395;partial=true;pseudo=true;start_range=.,92019 NZ_CP086372.1 Protein Homology CDS 92019 92126 . - 0 ID=cds-LNP58_RS00395;Parent=gene-LNP58_RS00395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155568.1;locus_tag=LNP58_RS00395;partial=true;product=RebB family R body protein;pseudo=true;start_range=.,92019;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 92506 93668 . + . ID=gene-LNP58_RS00400;Name=LNP58_RS00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00400;old_locus_tag=LNP58_00400;pseudo=true NZ_CP086372.1 Protein Homology CDS 92506 93668 . + 0 ID=cds-LNP58_RS00400;Parent=gene-LNP58_RS00400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090770.1;locus_tag=LNP58_RS00400;product=exo-alpha-sialidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 94021 95709 . + . ID=gene-LNP58_RS00405;Name=xopL;gbkey=Gene;gene=xopL;gene_biotype=protein_coding;locus_tag=LNP58_RS00405;old_locus_tag=LNP58_00405 NZ_CP086372.1 Protein Homology CDS 94021 95709 . + 0 ID=cds-WP_041182065.1;Parent=gene-LNP58_RS00405;Dbxref=Genbank:WP_041182065.1;Name=WP_041182065.1;Ontology_term=GO:0030254;gbkey=CDS;gene=xopL;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915126.1;locus_tag=LNP58_RS00405;product=type III secretion system leucine-rich repeat domain-containing effector protein XopL;protein_id=WP_041182065.1;transl_table=11 NZ_CP086372.1 RefSeq gene 95734 96465 . - . ID=gene-LNP58_RS00410;Name=LNP58_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00410;old_locus_tag=LNP58_00410 NZ_CP086372.1 Protein Homology CDS 95734 96465 . - 0 ID=cds-WP_011258519.1;Parent=gene-LNP58_RS00410;Dbxref=Genbank:WP_011258519.1;Name=WP_011258519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258519.1;locus_tag=LNP58_RS00410;product=copper homeostasis protein CutC;protein_id=WP_011258519.1;transl_table=11 NZ_CP086372.1 RefSeq gene 96462 97526 . - . ID=gene-LNP58_RS00415;Name=LNP58_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00415;old_locus_tag=LNP58_00415 NZ_CP086372.1 Protein Homology CDS 96462 97526 . - 0 ID=cds-WP_011258518.1;Parent=gene-LNP58_RS00415;Dbxref=Genbank:WP_011258518.1;Name=WP_011258518.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038037.1;locus_tag=LNP58_RS00415;product=N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase;protein_id=WP_011258518.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 97944 98905 . - . ID=gene-LNP58_RS00420;Name=LNP58_RS00420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00420;old_locus_tag=LNP58_00420;pseudo=true NZ_CP086372.1 Protein Homology CDS 97944 98905 . - 0 ID=cds-LNP58_RS00420;Parent=gene-LNP58_RS00420;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS00420;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 99412 100413 . + . ID=gene-LNP58_RS00425;Name=LNP58_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00425;old_locus_tag=LNP58_00425 NZ_CP086372.1 Protein Homology CDS 99412 100413 . + 0 ID=cds-WP_229001917.1;Parent=gene-LNP58_RS00425;Dbxref=Genbank:WP_229001917.1;Name=WP_229001917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258516.1;locus_tag=LNP58_RS00425;product=von Willebrand factor type A domain-containing protein;protein_id=WP_229001917.1;transl_table=11 NZ_CP086372.1 RefSeq gene 100434 100919 . + . ID=gene-LNP58_RS00430;Name=LNP58_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00430;old_locus_tag=LNP58_00430 NZ_CP086372.1 Protein Homology CDS 100434 100919 . + 0 ID=cds-WP_229001931.1;Parent=gene-LNP58_RS00430;Dbxref=Genbank:WP_229001931.1;Name=WP_229001931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023459.2;locus_tag=LNP58_RS00430;product=DUF3520 domain-containing protein;protein_id=WP_229001931.1;transl_table=11 NZ_CP086372.1 RefSeq gene 102148 103230 . + . ID=gene-LNP58_RS00435;Name=LNP58_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00435;old_locus_tag=LNP58_00435 NZ_CP086372.1 Protein Homology CDS 102148 103230 . + 0 ID=cds-WP_011408185.1;Parent=gene-LNP58_RS00435;Dbxref=Genbank:WP_011408185.1;Name=WP_011408185.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS00435;product=IS630 family transposase;protein_id=WP_011408185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 103242 103865 . - . ID=gene-LNP58_RS00440;Name=LNP58_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00440;old_locus_tag=LNP58_00440 NZ_CP086372.1 Protein Homology CDS 103242 103865 . - 0 ID=cds-WP_011258513.1;Parent=gene-LNP58_RS00440;Dbxref=Genbank:WP_011258513.1;Name=WP_011258513.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445323.1;locus_tag=LNP58_RS00440;product=GNAT family N-acetyltransferase;protein_id=WP_011258513.1;transl_table=11 NZ_CP086372.1 RefSeq gene 104116 104592 . - . ID=gene-LNP58_RS00445;Name=LNP58_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00445;old_locus_tag=LNP58_00445 NZ_CP086372.1 Protein Homology CDS 104116 104592 . - 0 ID=cds-WP_011258512.1;Parent=gene-LNP58_RS00445;Dbxref=Genbank:WP_011258512.1;Name=WP_011258512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482475.1;locus_tag=LNP58_RS00445;product=chemotaxis protein CheW;protein_id=WP_011258512.1;transl_table=11 NZ_CP086372.1 RefSeq gene 104626 105828 . - . ID=gene-LNP58_RS00450;Name=LNP58_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00450;old_locus_tag=LNP58_00450 NZ_CP086372.1 Protein Homology CDS 104626 105828 . - 0 ID=cds-WP_011408184.1;Parent=gene-LNP58_RS00450;Dbxref=Genbank:WP_011408184.1;Name=WP_011408184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988631.1;locus_tag=LNP58_RS00450;product=hypothetical protein;protein_id=WP_011408184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 105836 112762 . - . ID=gene-LNP58_RS00455;Name=LNP58_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00455;old_locus_tag=LNP58_00455 NZ_CP086372.1 Protein Homology CDS 105836 112762 . - 0 ID=cds-WP_069963843.1;Parent=gene-LNP58_RS00455;Dbxref=Genbank:WP_069963843.1;Name=WP_069963843.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158585.1;locus_tag=LNP58_RS00455;product=Hpt domain-containing protein;protein_id=WP_069963843.1;transl_table=11 NZ_CP086372.1 RefSeq gene 112876 114912 . - . ID=gene-LNP58_RS00460;Name=LNP58_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00460;old_locus_tag=LNP58_00460 NZ_CP086372.1 Protein Homology CDS 112876 114912 . - 0 ID=cds-WP_011258510.1;Parent=gene-LNP58_RS00460;Dbxref=Genbank:WP_011258510.1;Name=WP_011258510.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988635.1;locus_tag=LNP58_RS00460;product=methyl-accepting chemotaxis protein;protein_id=WP_011258510.1;transl_table=11 NZ_CP086372.1 RefSeq gene 114952 115482 . - . ID=gene-LNP58_RS00465;Name=LNP58_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00465;old_locus_tag=LNP58_00465 NZ_CP086372.1 Protein Homology CDS 114952 115482 . - 0 ID=cds-WP_003482487.1;Parent=gene-LNP58_RS00465;Dbxref=Genbank:WP_003482487.1;Name=WP_003482487.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=LNP58_RS00465;product=chemotaxis protein CheW;protein_id=WP_003482487.1;transl_table=11 NZ_CP086372.1 RefSeq gene 115482 115844 . - . ID=gene-LNP58_RS00470;Name=LNP58_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00470;old_locus_tag=LNP58_00470 NZ_CP086372.1 Protein Homology CDS 115482 115844 . - 0 ID=cds-WP_011258508.1;Parent=gene-LNP58_RS00470;Dbxref=Genbank:WP_011258508.1;Name=WP_011258508.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450735.1;locus_tag=LNP58_RS00470;product=response regulator;protein_id=WP_011258508.1;transl_table=11 NZ_CP086372.1 RefSeq gene 115862 116263 . - . ID=gene-LNP58_RS00475;Name=pilG;gbkey=Gene;gene=pilG;gene_biotype=protein_coding;locus_tag=LNP58_RS00475;old_locus_tag=LNP58_00475 NZ_CP086372.1 Protein Homology CDS 115862 116263 . - 0 ID=cds-WP_005913706.1;Parent=gene-LNP58_RS00475;Dbxref=Genbank:WP_005913706.1;Name=WP_005913706.1;gbkey=CDS;gene=pilG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913706.1;locus_tag=LNP58_RS00475;product=twitching motility response regulator PilG;protein_id=WP_005913706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 116513 117463 . + . ID=gene-LNP58_RS00480;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LNP58_RS00480;old_locus_tag=LNP58_00480 NZ_CP086372.1 Protein Homology CDS 116513 117463 . + 0 ID=cds-WP_044756943.1;Parent=gene-LNP58_RS00480;Dbxref=Genbank:WP_044756943.1;Name=WP_044756943.1;Ontology_term=GO:0006750,GO:0004363;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038049.1;locus_tag=LNP58_RS00480;product=glutathione synthase;protein_id=WP_044756943.1;transl_table=11 NZ_CP086372.1 RefSeq gene 117460 118335 . + . ID=gene-LNP58_RS00485;Name=LNP58_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00485;old_locus_tag=LNP58_00485 NZ_CP086372.1 Protein Homology CDS 117460 118335 . + 0 ID=cds-WP_011258506.1;Parent=gene-LNP58_RS00485;Dbxref=Genbank:WP_011258506.1;Name=WP_011258506.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159314.1;locus_tag=LNP58_RS00485;product=TonB family protein;protein_id=WP_011258506.1;transl_table=11 NZ_CP086372.1 RefSeq gene 118630 119544 . - . ID=gene-LNP58_RS00490;Name=LNP58_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00490;old_locus_tag=LNP58_00490 NZ_CP086372.1 Protein Homology CDS 118630 119544 . - 0 ID=cds-WP_011258505.1;Parent=gene-LNP58_RS00490;Dbxref=Genbank:WP_011258505.1;Name=WP_011258505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364201.1;locus_tag=LNP58_RS00490;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_011258505.1;transl_table=11 NZ_CP086372.1 RefSeq gene 119541 120260 . - . ID=gene-LNP58_RS00495;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LNP58_RS00495;old_locus_tag=LNP58_00495 NZ_CP086372.1 Protein Homology CDS 119541 120260 . - 0 ID=cds-WP_011408180.1;Parent=gene-LNP58_RS00495;Dbxref=Genbank:WP_011408180.1;Name=WP_011408180.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155557.1;locus_tag=LNP58_RS00495;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_011408180.1;transl_table=11 NZ_CP086372.1 RefSeq gene 120274 122301 . - . ID=gene-LNP58_RS00500;Name=LNP58_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00500;old_locus_tag=LNP58_00500 NZ_CP086372.1 Protein Homology CDS 120274 122301 . - 0 ID=cds-WP_011408179.1;Parent=gene-LNP58_RS00500;Dbxref=Genbank:WP_011408179.1;Name=WP_011408179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258503.1;locus_tag=LNP58_RS00500;product=ATP-dependent DNA helicase;protein_id=WP_011408179.1;transl_table=11 NZ_CP086372.1 RefSeq gene 122501 123025 . - . ID=gene-LNP58_RS00505;Name=LNP58_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00505;old_locus_tag=LNP58_00505 NZ_CP086372.1 Protein Homology CDS 122501 123025 . - 0 ID=cds-WP_011408178.1;Parent=gene-LNP58_RS00505;Dbxref=Genbank:WP_011408178.1;Name=WP_011408178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348248.1;locus_tag=LNP58_RS00505;product=hypothetical protein;protein_id=WP_011408178.1;transl_table=11 NZ_CP086372.1 RefSeq gene 123039 125483 . - . ID=gene-LNP58_RS00510;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LNP58_RS00510;old_locus_tag=LNP58_00510 NZ_CP086372.1 Protein Homology CDS 123039 125483 . - 0 ID=cds-WP_069959810.1;Parent=gene-LNP58_RS00510;Dbxref=Genbank:WP_069959810.1;Name=WP_069959810.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116043.1;locus_tag=LNP58_RS00510;product=penicillin-binding protein 1B;protein_id=WP_069959810.1;transl_table=11 NZ_CP086372.1 RefSeq gene 125725 127827 . + . ID=gene-LNP58_RS00515;Name=LNP58_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00515;old_locus_tag=LNP58_00515 NZ_CP086372.1 Protein Homology CDS 125725 127827 . + 0 ID=cds-WP_044756949.1;Parent=gene-LNP58_RS00515;Dbxref=Genbank:WP_044756949.1;Name=WP_044756949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113094.1;locus_tag=LNP58_RS00515;product=glycosyltransferase;protein_id=WP_044756949.1;transl_table=11 NZ_CP086372.1 RefSeq gene 128160 129602 . - . ID=gene-LNP58_RS00520;Name=LNP58_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00520;old_locus_tag=LNP58_00520 NZ_CP086372.1 Protein Homology CDS 128160 129602 . - 0 ID=cds-WP_042465507.1;Parent=gene-LNP58_RS00520;Dbxref=Genbank:WP_042465507.1;Name=WP_042465507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913689.1;locus_tag=LNP58_RS00520;product=hypothetical protein;protein_id=WP_042465507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 129885 132071 . - . ID=gene-LNP58_RS00525;Name=LNP58_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00525;old_locus_tag=LNP58_00525 NZ_CP086372.1 Protein Homology CDS 129885 132071 . - 0 ID=cds-WP_042464698.1;Parent=gene-LNP58_RS00525;Dbxref=Genbank:WP_042464698.1;Name=WP_042464698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090786.1;locus_tag=LNP58_RS00525;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_042464698.1;transl_table=11 NZ_CP086372.1 RefSeq gene 132361 132441 . + . ID=gene-LNP58_RS00530;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LNP58_RS00530;old_locus_tag=LNP58_00530 NZ_CP086372.1 Protein Homology CDS 132361 132441 . + 0 ID=cds-WP_002812057.1;Parent=gene-LNP58_RS00530;Dbxref=Genbank:WP_002812057.1;Name=WP_002812057.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: protein motif:HMM:NF019654.2;locus_tag=LNP58_RS00530;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_002812057.1;transl_table=11 NZ_CP086372.1 RefSeq gene 132525 133424 . + . ID=gene-LNP58_RS00535;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LNP58_RS00535;old_locus_tag=LNP58_00535 NZ_CP086372.1 Protein Homology CDS 132525 133424 . + 0 ID=cds-WP_011258497.1;Parent=gene-LNP58_RS00535;Dbxref=Genbank:WP_011258497.1;Name=WP_011258497.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038060.1;locus_tag=LNP58_RS00535;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_011258497.1;transl_table=11 NZ_CP086372.1 RefSeq gene 133421 134173 . + . ID=gene-LNP58_RS00540;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LNP58_RS00540;old_locus_tag=LNP58_00540 NZ_CP086372.1 Protein Homology CDS 133421 134173 . + 0 ID=cds-WP_011408174.1;Parent=gene-LNP58_RS00540;Dbxref=Genbank:WP_011408174.1;Name=WP_011408174.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437693.1;locus_tag=LNP58_RS00540;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_011408174.1;transl_table=11 NZ_CP086372.1 RefSeq gene 134170 134448 . + . ID=gene-LNP58_RS00545;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LNP58_RS00545;old_locus_tag=LNP58_00545 NZ_CP086372.1 Protein Homology CDS 134170 134448 . + 0 ID=cds-WP_011408173.1;Parent=gene-LNP58_RS00545;Dbxref=Genbank:WP_011408173.1;Name=WP_011408173.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445334.1;locus_tag=LNP58_RS00545;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_011408173.1;transl_table=11 NZ_CP086372.1 RefSeq gene 134445 135563 . + . ID=gene-LNP58_RS00550;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LNP58_RS00550;old_locus_tag=LNP58_00550 NZ_CP086372.1 Protein Homology CDS 134445 135563 . + 0 ID=cds-WP_011408172.1;Parent=gene-LNP58_RS00550;Dbxref=Genbank:WP_011408172.1;Name=WP_011408172.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160183.1;locus_tag=LNP58_RS00550;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_011408172.1;transl_table=11 NZ_CP086372.1 RefSeq gene 135626 136138 . + . ID=gene-LNP58_RS00555;Name=LNP58_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00555;old_locus_tag=LNP58_00555 NZ_CP086372.1 Protein Homology CDS 135626 136138 . + 0 ID=cds-WP_011408171.1;Parent=gene-LNP58_RS00555;Dbxref=Genbank:WP_011408171.1;Name=WP_011408171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482518.1;locus_tag=LNP58_RS00555;product=hypothetical protein;protein_id=WP_011408171.1;transl_table=11 NZ_CP086372.1 RefSeq gene 136449 137212 . - . ID=gene-LNP58_RS00560;Name=LNP58_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00560;old_locus_tag=LNP58_00560 NZ_CP086372.1 Protein Homology CDS 136897 137212 . - 0 ID=cds-WP_094187782.1;Parent=gene-LNP58_RS00560;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00560;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 136449 136897 . - 2 ID=cds-WP_094187782.1;Parent=gene-LNP58_RS00560;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00560;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 137383 138897 . + . ID=gene-LNP58_RS00565;Name=LNP58_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00565;old_locus_tag=LNP58_00565 NZ_CP086372.1 Protein Homology CDS 137383 138897 . + 0 ID=cds-WP_041182063.1;Parent=gene-LNP58_RS00565;Dbxref=Genbank:WP_041182063.1;Name=WP_041182063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159318.1;locus_tag=LNP58_RS00565;product=PhoPQ-activated protein PqaA family protein;protein_id=WP_041182063.1;transl_table=11 NZ_CP086372.1 RefSeq gene 139306 139617 . + . ID=gene-LNP58_RS23370;Name=LNP58_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23370 NZ_CP086372.1 Protein Homology CDS 139306 139617 . + 0 ID=cds-WP_250637369.1;Parent=gene-LNP58_RS23370;Dbxref=Genbank:WP_250637369.1;Name=WP_250637369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014715.2;locus_tag=LNP58_RS23370;product=glucose kinase;protein_id=WP_250637369.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 139542 139969 . + . ID=gene-LNP58_RS23375;Name=LNP58_RS23375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23375;pseudo=true NZ_CP086372.1 Protein Homology CDS 139542 139969 . + 0 ID=cds-LNP58_RS23375;Parent=gene-LNP58_RS23375;Note=frameshifted;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: protein motif:HMM:NF014715.2;locus_tag=LNP58_RS23375;product=glucokinase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 140013 140237 . + . ID=gene-LNP58_RS23380;Name=LNP58_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23380 NZ_CP086372.1 Protein Homology CDS 140013 140237 . + 0 ID=cds-WP_012445340.1;Parent=gene-LNP58_RS23380;Dbxref=Genbank:WP_012445340.1;Name=WP_012445340.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: protein motif:HMM:NF014715.2;locus_tag=LNP58_RS23380;product=glucokinase;protein_id=WP_012445340.1;transl_table=11 NZ_CP086372.1 RefSeq gene 140339 142981 . + . ID=gene-LNP58_RS00575;Name=LNP58_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00575;old_locus_tag=LNP58_00575 NZ_CP086372.1 Protein Homology CDS 140339 142981 . + 0 ID=cds-WP_011408167.1;Parent=gene-LNP58_RS00575;Dbxref=Genbank:WP_011408167.1;Name=WP_011408167.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988680.1;locus_tag=LNP58_RS00575;product=TonB-dependent receptor;protein_id=WP_011408167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 143202 147323 . - . ID=gene-LNP58_RS00580;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LNP58_RS00580;old_locus_tag=LNP58_00580 NZ_CP086372.1 Protein Homology CDS 143202 147323 . - 0 ID=cds-WP_113085565.1;Parent=gene-LNP58_RS00580;Dbxref=Genbank:WP_113085565.1;Name=WP_113085565.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303863.1;locus_tag=LNP58_RS00580;product=ATP-dependent RNA helicase HrpA;protein_id=WP_113085565.1;transl_table=11 NZ_CP086372.1 RefSeq gene 147425 147970 . + . ID=gene-LNP58_RS00585;Name=LNP58_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00585;old_locus_tag=LNP58_00585 NZ_CP086372.1 Protein Homology CDS 147425 147970 . + 0 ID=cds-WP_011408166.1;Parent=gene-LNP58_RS00585;Dbxref=Genbank:WP_011408166.1;Name=WP_011408166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364158.1;locus_tag=LNP58_RS00585;product=DNA starvation/stationary phase protection protein;protein_id=WP_011408166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 148527 150323 . + . ID=gene-LNP58_RS00590;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LNP58_RS00590;old_locus_tag=LNP58_00590 NZ_CP086372.1 Protein Homology CDS 148527 150323 . + 0 ID=cds-WP_069959808.1;Parent=gene-LNP58_RS00590;Dbxref=Genbank:WP_069959808.1;Name=WP_069959808.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155540.1;locus_tag=LNP58_RS00590;product=DNA helicase RecQ;protein_id=WP_069959808.1;transl_table=11 NZ_CP086372.1 RefSeq gene 150462 150959 . + . ID=gene-LNP58_RS00595;Name=LNP58_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00595;old_locus_tag=LNP58_00595 NZ_CP086372.1 Protein Homology CDS 150462 150959 . + 0 ID=cds-WP_011408165.1;Parent=gene-LNP58_RS00595;Dbxref=Genbank:WP_011408165.1;Name=WP_011408165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155539.1;locus_tag=LNP58_RS00595;product=hypothetical protein;protein_id=WP_011408165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 151038 151442 . + . ID=gene-LNP58_RS00600;Name=LNP58_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00600;old_locus_tag=LNP58_00600 NZ_CP086372.1 Protein Homology CDS 151038 151442 . + 0 ID=cds-WP_011408164.1;Parent=gene-LNP58_RS00600;Dbxref=Genbank:WP_011408164.1;Name=WP_011408164.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090797.1;locus_tag=LNP58_RS00600;product=response regulator;protein_id=WP_011408164.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 151655 151803 . + . ID=gene-LNP58_RS00605;Name=LNP58_RS00605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00605;old_locus_tag=LNP58_00605;partial=true;pseudo=true;start_range=.,151655 NZ_CP086372.1 Protein Homology CDS 151655 151803 . + 0 ID=cds-LNP58_RS00605;Parent=gene-LNP58_RS00605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257519.1;locus_tag=LNP58_RS00605;partial=true;product=integrase;pseudo=true;start_range=.,151655;transl_table=11 NZ_CP086372.1 RefSeq gene 152149 152484 . - . ID=gene-LNP58_RS00610;Name=LNP58_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00610;old_locus_tag=LNP58_00610 NZ_CP086372.1 Protein Homology CDS 152149 152484 . - 0 ID=cds-WP_011408162.1;Parent=gene-LNP58_RS00610;Dbxref=Genbank:WP_011408162.1;Name=WP_011408162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408162.1;locus_tag=LNP58_RS00610;product=hypothetical protein;protein_id=WP_011408162.1;transl_table=11 NZ_CP086372.1 RefSeq gene 152712 153998 . + . ID=gene-LNP58_RS00615;Name=LNP58_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00615;old_locus_tag=LNP58_00615 NZ_CP086372.1 Protein Homology CDS 152712 153998 . + 0 ID=cds-WP_011408161.1;Parent=gene-LNP58_RS00615;Dbxref=Genbank:WP_011408161.1;Name=WP_011408161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927424.1;locus_tag=LNP58_RS00615;product=Y-family DNA polymerase;protein_id=WP_011408161.1;transl_table=11 NZ_CP086372.1 RefSeq gene 155128 155538 . + . ID=gene-LNP58_RS00620;Name=LNP58_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00620;old_locus_tag=LNP58_00620 NZ_CP086372.1 Protein Homology CDS 155128 155538 . + 0 ID=cds-WP_042464694.1;Parent=gene-LNP58_RS00620;Dbxref=Genbank:WP_042464694.1;Name=WP_042464694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=LNP58_RS00620;product=PAAR domain-containing protein;protein_id=WP_042464694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 155574 156044 . + . ID=gene-LNP58_RS00625;Name=LNP58_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00625;old_locus_tag=LNP58_00625 NZ_CP086372.1 Protein Homology CDS 155574 156044 . + 0 ID=cds-WP_229001918.1;Parent=gene-LNP58_RS00625;Dbxref=Genbank:WP_229001918.1;Name=WP_229001918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260874.1;locus_tag=LNP58_RS00625;product=DUF4123 domain-containing protein;protein_id=WP_229001918.1;transl_table=11 NZ_CP086372.1 RefSeq gene 156025 156366 . + . ID=gene-LNP58_RS00630;Name=LNP58_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00630;old_locus_tag=LNP58_00630 NZ_CP086372.1 Protein Homology CDS 156025 156366 . + 0 ID=cds-WP_011408158.1;Parent=gene-LNP58_RS00630;Dbxref=Genbank:WP_011408158.1;Name=WP_011408158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=LNP58_RS00630;product=hypothetical protein;protein_id=WP_011408158.1;transl_table=11 NZ_CP086372.1 RefSeq gene 156380 157087 . + . ID=gene-LNP58_RS00635;Name=LNP58_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00635;old_locus_tag=LNP58_00635 NZ_CP086372.1 Protein Homology CDS 156380 157087 . + 0 ID=cds-WP_113221989.1;Parent=gene-LNP58_RS00635;Dbxref=Genbank:WP_113221989.1;Name=WP_113221989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408157.1;locus_tag=LNP58_RS00635;product=Tox-REase-5 domain-containing protein;protein_id=WP_113221989.1;transl_table=11 NZ_CP086372.1 RefSeq gene 157084 157830 . + . ID=gene-LNP58_RS00640;Name=LNP58_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00640;old_locus_tag=LNP58_00640 NZ_CP086372.1 Protein Homology CDS 157084 157830 . + 0 ID=cds-WP_011408156.1;Parent=gene-LNP58_RS00640;Dbxref=Genbank:WP_011408156.1;Name=WP_011408156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026917.2;locus_tag=LNP58_RS00640;product=Imm52 family immunity protein;protein_id=WP_011408156.1;transl_table=11 NZ_CP086372.1 RefSeq gene 157897 158598 . - . ID=gene-LNP58_RS00645;Name=LNP58_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00645;old_locus_tag=LNP58_00645 NZ_CP086372.1 Protein Homology CDS 157897 158598 . - 0 ID=cds-WP_011408155.1;Parent=gene-LNP58_RS00645;Dbxref=Genbank:WP_011408155.1;Name=WP_011408155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=LNP58_RS00645;product=site-specific DNA-methyltransferase;protein_id=WP_011408155.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 158516 158701 . - . ID=gene-LNP58_RS00650;Name=LNP58_RS00650;end_range=158701,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00650;old_locus_tag=LNP58_00650;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 158516 158701 . - 0 ID=cds-LNP58_RS00650;Parent=gene-LNP58_RS00650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=158701,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=LNP58_RS00650;partial=true;product=Com family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 158612 158818 . + . ID=gene-LNP58_RS00655;Name=LNP58_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00655;old_locus_tag=LNP58_00655 NZ_CP086372.1 Protein Homology CDS 158612 158818 . + 0 ID=cds-WP_228329740.1;Parent=gene-LNP58_RS00655;Dbxref=Genbank:WP_228329740.1;Name=WP_228329740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171515.1;locus_tag=LNP58_RS00655;product=hypothetical protein;protein_id=WP_228329740.1;transl_table=11 NZ_CP086372.1 RefSeq gene 158787 159809 . - . ID=gene-LNP58_RS00660;Name=LNP58_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00660;old_locus_tag=LNP58_00660 NZ_CP086372.1 Protein Homology CDS 158787 159809 . - 0 ID=cds-WP_069959807.1;Parent=gene-LNP58_RS00660;Dbxref=Genbank:WP_069959807.1;Name=WP_069959807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408154.1;locus_tag=LNP58_RS00660;product=phage portal protein;protein_id=WP_069959807.1;transl_table=11 NZ_CP086372.1 RefSeq gene 159809 161572 . - . ID=gene-LNP58_RS00665;Name=LNP58_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00665;old_locus_tag=LNP58_00665 NZ_CP086372.1 Protein Homology CDS 159809 161572 . - 0 ID=cds-WP_173340394.1;Parent=gene-LNP58_RS00665;Dbxref=Genbank:WP_173340394.1;Name=WP_173340394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929437.1;locus_tag=LNP58_RS00665;product=terminase ATPase subunit family protein;protein_id=WP_173340394.1;transl_table=11 NZ_CP086372.1 RefSeq gene 161715 162557 . + . ID=gene-LNP58_RS00670;Name=LNP58_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00670;old_locus_tag=LNP58_00670 NZ_CP086372.1 Protein Homology CDS 161715 162557 . + 0 ID=cds-WP_011408152.1;Parent=gene-LNP58_RS00670;Dbxref=Genbank:WP_011408152.1;Name=WP_011408152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809139.1;locus_tag=LNP58_RS00670;product=GPO family capsid scaffolding protein;protein_id=WP_011408152.1;transl_table=11 NZ_CP086372.1 RefSeq gene 162604 163620 . + . ID=gene-LNP58_RS00675;Name=LNP58_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00675;old_locus_tag=LNP58_00675 NZ_CP086372.1 Protein Homology CDS 162604 163620 . + 0 ID=cds-WP_011258476.1;Parent=gene-LNP58_RS00675;Dbxref=Genbank:WP_011258476.1;Name=WP_011258476.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809141.1;locus_tag=LNP58_RS00675;product=phage major capsid protein%2C P2 family;protein_id=WP_011258476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 163624 164343 . + . ID=gene-LNP58_RS00680;Name=LNP58_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00680;old_locus_tag=LNP58_00680 NZ_CP086372.1 Protein Homology CDS 163624 164343 . + 0 ID=cds-WP_011258475.1;Parent=gene-LNP58_RS00680;Dbxref=Genbank:WP_011258475.1;Name=WP_011258475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364022.1;locus_tag=LNP58_RS00680;product=terminase endonuclease subunit;protein_id=WP_011258475.1;transl_table=11 NZ_CP086372.1 RefSeq gene 164443 164910 . + . ID=gene-LNP58_RS00685;Name=LNP58_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00685;old_locus_tag=LNP58_00685 NZ_CP086372.1 Protein Homology CDS 164443 164910 . + 0 ID=cds-WP_011408149.1;Parent=gene-LNP58_RS00685;Dbxref=Genbank:WP_011408149.1;Name=WP_011408149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809166.1;locus_tag=LNP58_RS00685;product=head completion/stabilization protein;protein_id=WP_011408149.1;transl_table=11 NZ_CP086372.1 RefSeq gene 164910 165119 . + . ID=gene-LNP58_RS00690;Name=LNP58_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00690;old_locus_tag=LNP58_00690 NZ_CP086372.1 Protein Homology CDS 164910 165119 . + 0 ID=cds-WP_011258473.1;Parent=gene-LNP58_RS00690;Dbxref=Genbank:WP_011258473.1;Name=WP_011258473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868168.1;locus_tag=LNP58_RS00690;product=tail protein X;protein_id=WP_011258473.1;transl_table=11 NZ_CP086372.1 RefSeq gene 165124 165480 . + . ID=gene-LNP58_RS00695;Name=LNP58_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00695;old_locus_tag=LNP58_00695 NZ_CP086372.1 Protein Homology CDS 165124 165480 . + 0 ID=cds-WP_069959806.1;Parent=gene-LNP58_RS00695;Dbxref=Genbank:WP_069959806.1;Name=WP_069959806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929454.1;locus_tag=LNP58_RS00695;product=phage holin family protein;protein_id=WP_069959806.1;transl_table=11 NZ_CP086372.1 RefSeq gene 165473 165748 . + . ID=gene-LNP58_RS00700;Name=LNP58_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00700;old_locus_tag=LNP58_00700 NZ_CP086372.1 Protein Homology CDS 165473 165748 . + 0 ID=cds-WP_113090128.1;Parent=gene-LNP58_RS00700;Dbxref=Genbank:WP_113090128.1;Name=WP_113090128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167622.1;locus_tag=LNP58_RS00700;product=phage holin family protein;protein_id=WP_113090128.1;transl_table=11 NZ_CP086372.1 RefSeq gene 165748 166386 . + . ID=gene-LNP58_RS00705;Name=LNP58_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00705;old_locus_tag=LNP58_00705 NZ_CP086372.1 Protein Homology CDS 165748 166386 . + 0 ID=cds-WP_048484928.1;Parent=gene-LNP58_RS00705;Dbxref=Genbank:WP_048484928.1;Name=WP_048484928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572719.1;locus_tag=LNP58_RS00705;product=glycoside hydrolase family 19 protein;protein_id=WP_048484928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 166386 166874 . + . ID=gene-LNP58_RS00710;Name=LNP58_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00710;old_locus_tag=LNP58_00710 NZ_CP086372.1 Protein Homology CDS 166386 166874 . + 0 ID=cds-WP_012445489.1;Parent=gene-LNP58_RS00710;Dbxref=Genbank:WP_012445489.1;Name=WP_012445489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118585.1;locus_tag=LNP58_RS00710;product=hypothetical protein;protein_id=WP_012445489.1;transl_table=11 NZ_CP086372.1 RefSeq gene 166871 167290 . + . ID=gene-LNP58_RS00715;Name=LNP58_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00715;old_locus_tag=LNP58_00715 NZ_CP086372.1 Protein Homology CDS 166871 167290 . + 0 ID=cds-WP_048484876.1;Parent=gene-LNP58_RS00715;Dbxref=Genbank:WP_048484876.1;Name=WP_048484876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445490.1;locus_tag=LNP58_RS00715;product=phage tail protein;protein_id=WP_048484876.1;transl_table=11 NZ_CP086372.1 RefSeq gene 167278 167724 . + . ID=gene-LNP58_RS00720;Name=LNP58_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00720;old_locus_tag=LNP58_00720 NZ_CP086372.1 Protein Homology CDS 167278 167724 . + 0 ID=cds-WP_048484877.1;Parent=gene-LNP58_RS00720;Dbxref=Genbank:WP_048484877.1;Name=WP_048484877.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167618.1;locus_tag=LNP58_RS00720;product=phage virion morphogenesis protein;protein_id=WP_048484877.1;transl_table=11 NZ_CP086372.1 RefSeq gene 168005 168289 . + . ID=gene-LNP58_RS00725;Name=LNP58_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00725;old_locus_tag=LNP58_00725 NZ_CP086372.1 Protein Homology CDS 168005 168289 . + 0 ID=cds-WP_048484878.1;Parent=gene-LNP58_RS00725;Dbxref=Genbank:WP_048484878.1;Name=WP_048484878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036801.1;locus_tag=LNP58_RS00725;product=hypothetical protein;protein_id=WP_048484878.1;transl_table=11 NZ_CP086372.1 RefSeq gene 168523 168924 . - . ID=gene-LNP58_RS00730;Name=LNP58_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00730;old_locus_tag=LNP58_00730 NZ_CP086372.1 GeneMarkS-2+ CDS 168523 168924 . - 0 ID=cds-WP_146769850.1;Parent=gene-LNP58_RS00730;Dbxref=Genbank:WP_146769850.1;Name=WP_146769850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS00730;product=hypothetical protein;protein_id=WP_146769850.1;transl_table=11 NZ_CP086372.1 RefSeq gene 169323 170291 . - . ID=gene-LNP58_RS00735;Name=LNP58_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00735;old_locus_tag=LNP58_00735 NZ_CP086372.1 Protein Homology CDS 169323 170291 . - 0 ID=cds-WP_011258803.1;Parent=gene-LNP58_RS00735;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS00735;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 170410 171173 . + . ID=gene-LNP58_RS00740;Name=LNP58_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00740;old_locus_tag=LNP58_00740 NZ_CP086372.1 Protein Homology CDS 170410 170725 . + 0 ID=cds-WP_094187782.1-2;Parent=gene-LNP58_RS00740;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00740;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 170725 171173 . + 2 ID=cds-WP_094187782.1-2;Parent=gene-LNP58_RS00740;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00740;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 171407 172297 . + . ID=gene-LNP58_RS00745;Name=LNP58_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00745;old_locus_tag=LNP58_00745 NZ_CP086372.1 Protein Homology CDS 171407 172297 . + 0 ID=cds-WP_113090166.1;Parent=gene-LNP58_RS00745;Dbxref=Genbank:WP_113090166.1;Name=WP_113090166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904173.1;locus_tag=LNP58_RS00745;product=baseplate J/gp47 family protein;protein_id=WP_113090166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 172290 172835 . + . ID=gene-LNP58_RS00750;Name=LNP58_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00750;old_locus_tag=LNP58_00750 NZ_CP086372.1 Protein Homology CDS 172290 172835 . + 0 ID=cds-WP_041182705.1;Parent=gene-LNP58_RS00750;Dbxref=Genbank:WP_041182705.1;Name=WP_041182705.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118949.1;locus_tag=LNP58_RS00750;product=phage tail protein I;protein_id=WP_041182705.1;transl_table=11 NZ_CP086372.1 RefSeq gene 172845 174350 . + . ID=gene-LNP58_RS00755;Name=LNP58_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00755;old_locus_tag=LNP58_00755 NZ_CP086372.1 Protein Homology CDS 172845 174350 . + 0 ID=cds-WP_113090165.1;Parent=gene-LNP58_RS00755;Dbxref=Genbank:WP_113090165.1;Name=WP_113090165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408140.1;locus_tag=LNP58_RS00755;product=phage tail protein;protein_id=WP_113090165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 174358 174936 . + . ID=gene-LNP58_RS00760;Name=LNP58_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00760;old_locus_tag=LNP58_00760 NZ_CP086372.1 Protein Homology CDS 174358 174936 . + 0 ID=cds-WP_069959799.1;Parent=gene-LNP58_RS00760;Dbxref=Genbank:WP_069959799.1;Name=WP_069959799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408139.1;locus_tag=LNP58_RS00760;product=phage tail protein;protein_id=WP_069959799.1;transl_table=11 NZ_CP086372.1 RefSeq gene 174997 175560 . + . ID=gene-LNP58_RS00765;Name=LNP58_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00765;old_locus_tag=LNP58_00765 NZ_CP086372.1 Protein Homology CDS 174997 175560 . + 0 ID=cds-WP_113090164.1;Parent=gene-LNP58_RS00765;Dbxref=Genbank:WP_113090164.1;Name=WP_113090164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809189.1;locus_tag=LNP58_RS00765;product=phage baseplate assembly protein V;protein_id=WP_113090164.1;transl_table=11 NZ_CP086372.1 RefSeq gene 175557 175916 . + . ID=gene-LNP58_RS00770;Name=LNP58_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00770;old_locus_tag=LNP58_00770 NZ_CP086372.1 Protein Homology CDS 175557 175916 . + 0 ID=cds-WP_069959797.1;Parent=gene-LNP58_RS00770;Dbxref=Genbank:WP_069959797.1;Name=WP_069959797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809191.1;locus_tag=LNP58_RS00770;product=GPW/gp25 family protein;protein_id=WP_069959797.1;transl_table=11 NZ_CP086372.1 RefSeq gene 175928 177094 . + . ID=gene-LNP58_RS00775;Name=LNP58_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00775;old_locus_tag=LNP58_00775 NZ_CP086372.1 Protein Homology CDS 175928 177094 . + 0 ID=cds-WP_069959796.1;Parent=gene-LNP58_RS00775;Dbxref=Genbank:WP_069959796.1;Name=WP_069959796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450506.1;locus_tag=LNP58_RS00775;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_069959796.1;transl_table=11 NZ_CP086372.1 RefSeq gene 177125 177634 . + . ID=gene-LNP58_RS00780;Name=LNP58_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00780;old_locus_tag=LNP58_00780 NZ_CP086372.1 Protein Homology CDS 177125 177634 . + 0 ID=cds-WP_011258458.1;Parent=gene-LNP58_RS00780;Dbxref=Genbank:WP_011258458.1;Name=WP_011258458.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038108.1;locus_tag=LNP58_RS00780;product=phage major tail tube protein;protein_id=WP_011258458.1;transl_table=11 NZ_CP086372.1 RefSeq gene 177680 177982 . + . ID=gene-LNP58_RS00785;Name=LNP58_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00785;old_locus_tag=LNP58_00785 NZ_CP086372.1 Protein Homology CDS 177680 177982 . + 0 ID=cds-WP_011258457.1;Parent=gene-LNP58_RS00785;Dbxref=Genbank:WP_011258457.1;Name=WP_011258457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851112.1;locus_tag=LNP58_RS00785;product=phage tail assembly protein;protein_id=WP_011258457.1;transl_table=11 NZ_CP086372.1 RefSeq gene 177991 178104 . + . ID=gene-LNP58_RS00790;Name=LNP58_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00790;old_locus_tag=LNP58_00790 NZ_CP086372.1 Protein Homology CDS 177991 178104 . + 0 ID=cds-WP_011258456.1;Parent=gene-LNP58_RS00790;Dbxref=Genbank:WP_011258456.1;Name=WP_011258456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118941.1;locus_tag=LNP58_RS00790;product=GpE family phage tail protein;protein_id=WP_011258456.1;transl_table=11 NZ_CP086372.1 RefSeq gene 178137 181007 . + . ID=gene-LNP58_RS00795;Name=LNP58_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00795;old_locus_tag=LNP58_00795 NZ_CP086372.1 Protein Homology CDS 178137 181007 . + 0 ID=cds-WP_011258455.1;Parent=gene-LNP58_RS00795;Dbxref=Genbank:WP_011258455.1;Name=WP_011258455.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167608.1;locus_tag=LNP58_RS00795;product=phage tail tape measure protein;protein_id=WP_011258455.1;transl_table=11 NZ_CP086372.1 RefSeq gene 181020 181421 . + . ID=gene-LNP58_RS00800;Name=LNP58_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00800;old_locus_tag=LNP58_00800 NZ_CP086372.1 Protein Homology CDS 181020 181421 . + 0 ID=cds-WP_011258454.1;Parent=gene-LNP58_RS00800;Dbxref=Genbank:WP_011258454.1;Name=WP_011258454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258454.1;locus_tag=LNP58_RS00800;product=phage tail protein;protein_id=WP_011258454.1;transl_table=11 NZ_CP086372.1 RefSeq gene 181418 182404 . + . ID=gene-LNP58_RS00805;Name=LNP58_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00805;old_locus_tag=LNP58_00805 NZ_CP086372.1 Protein Homology CDS 181418 182404 . + 0 ID=cds-WP_011258453.1;Parent=gene-LNP58_RS00805;Dbxref=Genbank:WP_011258453.1;Name=WP_011258453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258453.1;locus_tag=LNP58_RS00805;product=phage late control D family protein;protein_id=WP_011258453.1;transl_table=11 NZ_CP086372.1 RefSeq gene 183065 183502 . - . ID=gene-LNP58_RS00810;Name=LNP58_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00810;old_locus_tag=LNP58_00810 NZ_CP086372.1 Protein Homology CDS 183065 183502 . - 0 ID=cds-WP_011258452.1;Parent=gene-LNP58_RS00810;Dbxref=Genbank:WP_011258452.1;Name=WP_011258452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258452.1;locus_tag=LNP58_RS00810;product=helix-turn-helix transcriptional regulator;protein_id=WP_011258452.1;transl_table=11 NZ_CP086372.1 RefSeq gene 183592 183831 . + . ID=gene-LNP58_RS00815;Name=LNP58_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00815;old_locus_tag=LNP58_00815 NZ_CP086372.1 Protein Homology CDS 183592 183831 . + 0 ID=cds-WP_228329739.1;Parent=gene-LNP58_RS00815;Dbxref=Genbank:WP_228329739.1;Name=WP_228329739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=LNP58_RS00815;product=DNA-binding protein;protein_id=WP_228329739.1;transl_table=11 NZ_CP086372.1 RefSeq gene 183834 184154 . + . ID=gene-LNP58_RS00820;Name=LNP58_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00820;old_locus_tag=LNP58_00820 NZ_CP086372.1 Protein Homology CDS 183834 184154 . + 0 ID=cds-WP_011408136.1;Parent=gene-LNP58_RS00820;Dbxref=Genbank:WP_011408136.1;Name=WP_011408136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572766.1;locus_tag=LNP58_RS00820;product=ogr/Delta-like zinc finger family protein;protein_id=WP_011408136.1;transl_table=11 NZ_CP086372.1 RefSeq gene 184165 184443 . + . ID=gene-LNP58_RS00825;Name=LNP58_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00825;old_locus_tag=LNP58_00825 NZ_CP086372.1 Protein Homology CDS 184165 184443 . + 0 ID=cds-WP_011408135.1;Parent=gene-LNP58_RS00825;Dbxref=Genbank:WP_011408135.1;Name=WP_011408135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851009.1;locus_tag=LNP58_RS00825;product=hypothetical protein;protein_id=WP_011408135.1;transl_table=11 NZ_CP086372.1 RefSeq gene 184440 184652 . + . ID=gene-LNP58_RS00830;Name=LNP58_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00830;old_locus_tag=LNP58_00830 NZ_CP086372.1 Protein Homology CDS 184440 184652 . + 0 ID=cds-WP_011258450.1;Parent=gene-LNP58_RS00830;Dbxref=Genbank:WP_011258450.1;Name=WP_011258450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364092.1;locus_tag=LNP58_RS00830;product=hypothetical protein;protein_id=WP_011258450.1;transl_table=11 NZ_CP086372.1 RefSeq gene 184662 187358 . + . ID=gene-LNP58_RS00835;Name=LNP58_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00835;old_locus_tag=LNP58_00835 NZ_CP086372.1 Protein Homology CDS 184662 187358 . + 0 ID=cds-WP_011408134.1;Parent=gene-LNP58_RS00835;Dbxref=Genbank:WP_011408134.1;Name=WP_011408134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258449.1;locus_tag=LNP58_RS00835;product=toprim domain-containing protein;protein_id=WP_011408134.1;transl_table=11 NZ_CP086372.1 RefSeq gene 187667 187885 . + . ID=gene-LNP58_RS00840;Name=LNP58_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00840;old_locus_tag=LNP58_00840 NZ_CP086372.1 Protein Homology CDS 187667 187885 . + 0 ID=cds-WP_011408133.1;Parent=gene-LNP58_RS00840;Dbxref=Genbank:WP_011408133.1;Name=WP_011408133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922222.1;locus_tag=LNP58_RS00840;product=hypothetical protein;protein_id=WP_011408133.1;transl_table=11 NZ_CP086372.1 RefSeq gene 187882 188160 . + . ID=gene-LNP58_RS00845;Name=LNP58_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00845;old_locus_tag=LNP58_00845 NZ_CP086372.1 Protein Homology CDS 187882 188160 . + 0 ID=cds-WP_011258448.1;Parent=gene-LNP58_RS00845;Dbxref=Genbank:WP_011258448.1;Name=WP_011258448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922224.1;locus_tag=LNP58_RS00845;product=hypothetical protein;protein_id=WP_011258448.1;transl_table=11 NZ_CP086372.1 RefSeq gene 188386 188796 . + . ID=gene-LNP58_RS00850;Name=LNP58_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00850;old_locus_tag=LNP58_00850 NZ_CP086372.1 Protein Homology CDS 188386 188796 . + 0 ID=cds-WP_010364106.1;Parent=gene-LNP58_RS00850;Dbxref=Genbank:WP_010364106.1;Name=WP_010364106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038122.1;locus_tag=LNP58_RS00850;product=hypothetical protein;protein_id=WP_010364106.1;transl_table=11 NZ_CP086372.1 RefSeq gene 188789 188965 . + . ID=gene-LNP58_RS00855;Name=LNP58_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00855;old_locus_tag=LNP58_00855 NZ_CP086372.1 Protein Homology CDS 188789 188965 . + 0 ID=cds-WP_053503014.1;Parent=gene-LNP58_RS00855;Dbxref=Genbank:WP_053503014.1;Name=WP_053503014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922230.1;locus_tag=LNP58_RS00855;product=hypothetical protein;protein_id=WP_053503014.1;transl_table=11 NZ_CP086372.1 RefSeq gene 188958 189233 . + . ID=gene-LNP58_RS00860;Name=LNP58_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00860;old_locus_tag=LNP58_00860 NZ_CP086372.1 Protein Homology CDS 188958 189233 . + 0 ID=cds-WP_011258447.1;Parent=gene-LNP58_RS00860;Dbxref=Genbank:WP_011258447.1;Name=WP_011258447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258447.1;locus_tag=LNP58_RS00860;product=hypothetical protein;protein_id=WP_011258447.1;transl_table=11 NZ_CP086372.1 RefSeq gene 189230 189475 . + . ID=gene-LNP58_RS00865;Name=LNP58_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00865;old_locus_tag=LNP58_00865 NZ_CP086372.1 Protein Homology CDS 189230 189475 . + 0 ID=cds-WP_041182407.1;Parent=gene-LNP58_RS00865;Dbxref=Genbank:WP_041182407.1;Name=WP_041182407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364111.1;locus_tag=LNP58_RS00865;product=hypothetical protein;protein_id=WP_041182407.1;transl_table=11 NZ_CP086372.1 RefSeq gene 189472 189744 . + . ID=gene-LNP58_RS00870;Name=LNP58_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00870;old_locus_tag=LNP58_00870 NZ_CP086372.1 Protein Homology CDS 189472 189744 . + 0 ID=cds-WP_011408131.1;Parent=gene-LNP58_RS00870;Dbxref=Genbank:WP_011408131.1;Name=WP_011408131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408131.1;locus_tag=LNP58_RS00870;product=hypothetical protein;protein_id=WP_011408131.1;transl_table=11 NZ_CP086372.1 RefSeq gene 189741 189947 . + . ID=gene-LNP58_RS00875;Name=LNP58_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00875;old_locus_tag=LNP58_00875 NZ_CP086372.1 Protein Homology CDS 189741 189947 . + 0 ID=cds-WP_011408130.1;Parent=gene-LNP58_RS00875;Dbxref=Genbank:WP_011408130.1;Name=WP_011408130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408130.1;locus_tag=LNP58_RS00875;product=hypothetical protein;protein_id=WP_011408130.1;transl_table=11 NZ_CP086372.1 RefSeq gene 189944 190165 . + . ID=gene-LNP58_RS00880;Name=LNP58_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00880;old_locus_tag=LNP58_00880 NZ_CP086372.1 Protein Homology CDS 189944 190165 . + 0 ID=cds-WP_041182055.1;Parent=gene-LNP58_RS00880;Dbxref=Genbank:WP_041182055.1;Name=WP_041182055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922239.1;locus_tag=LNP58_RS00880;product=hypothetical protein;protein_id=WP_041182055.1;transl_table=11 NZ_CP086372.1 RefSeq gene 190165 191349 . + . ID=gene-LNP58_RS00885;Name=LNP58_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00885;old_locus_tag=LNP58_00885 NZ_CP086372.1 Protein Homology CDS 190165 191349 . + 0 ID=cds-WP_011258445.1;Parent=gene-LNP58_RS00885;Dbxref=Genbank:WP_011258445.1;Name=WP_011258445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115544.1;locus_tag=LNP58_RS00885;product=integrase;protein_id=WP_011258445.1;transl_table=11 NZ_CP086372.1 RefSeq gene 191471 191546 . - . ID=gene-LNP58_RS00890;Name=LNP58_RS00890;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS00890;old_locus_tag=LNP58_00890 NZ_CP086372.1 tRNAscan-SE tRNA 191471 191546 . - . ID=rna-LNP58_RS00890;Parent=gene-LNP58_RS00890;anticodon=(pos:complement(191511..191513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS00890;product=tRNA-Lys NZ_CP086372.1 tRNAscan-SE exon 191471 191546 . - . ID=exon-LNP58_RS00890-1;Parent=rna-LNP58_RS00890;anticodon=(pos:complement(191511..191513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS00890;product=tRNA-Lys NZ_CP086372.1 RefSeq gene 191594 192268 . - . ID=gene-LNP58_RS00895;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LNP58_RS00895;old_locus_tag=LNP58_00895 NZ_CP086372.1 Protein Homology CDS 191594 192268 . - 0 ID=cds-WP_008578058.1;Parent=gene-LNP58_RS00895;Dbxref=Genbank:WP_008578058.1;Name=WP_008578058.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038130.1;locus_tag=LNP58_RS00895;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_008578058.1;transl_table=11 NZ_CP086372.1 RefSeq gene 192379 192455 . - . ID=gene-LNP58_RS00900;Name=LNP58_RS00900;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS00900;old_locus_tag=LNP58_00900 NZ_CP086372.1 cmsearch ncRNA 192379 192455 . - . ID=rna-LNP58_RS00900;Parent=gene-LNP58_RS00900;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00900;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 192379 192455 . - . ID=exon-LNP58_RS00900-1;Parent=rna-LNP58_RS00900;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS00900;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 192647 194023 . + . ID=gene-LNP58_RS00905;Name=LNP58_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00905;old_locus_tag=LNP58_00905 NZ_CP086372.1 Protein Homology CDS 192647 194023 . + 0 ID=cds-WP_069959795.1;Parent=gene-LNP58_RS00905;Dbxref=Genbank:WP_069959795.1;Name=WP_069959795.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS00905;product=IS5 family transposase;protein_id=WP_069959795.1;transl_table=11 NZ_CP086372.1 RefSeq gene 194090 194853 . + . ID=gene-LNP58_RS00910;Name=LNP58_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00910;old_locus_tag=LNP58_00910 NZ_CP086372.1 Protein Homology CDS 194090 194405 . + 0 ID=cds-WP_094187715.1;Parent=gene-LNP58_RS00910;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00910;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 194405 194853 . + 2 ID=cds-WP_094187715.1;Parent=gene-LNP58_RS00910;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS00910;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 194904 196139 . - . ID=gene-LNP58_RS00915;Name=LNP58_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00915;old_locus_tag=LNP58_00915 NZ_CP086372.1 Protein Homology CDS 194904 196139 . - 0 ID=cds-WP_011257310.1;Parent=gene-LNP58_RS00915;Dbxref=Genbank:WP_011257310.1;Name=WP_011257310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS00915;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257310.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 196326 197141 . + . ID=gene-LNP58_RS00920;Name=LNP58_RS00920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00920;old_locus_tag=LNP58_00920;partial=true;pseudo=true;start_range=.,196326 NZ_CP086372.1 Protein Homology CDS 196326 197141 . + 0 ID=cds-LNP58_RS00920;Parent=gene-LNP58_RS00920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS00920;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,196326;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 197212 198528 . + . ID=gene-LNP58_RS00925;Name=LNP58_RS00925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00925;old_locus_tag=LNP58_00925;pseudo=true NZ_CP086372.1 Protein Homology CDS 197212 198528 . + 0 ID=cds-LNP58_RS00925;Parent=gene-LNP58_RS00925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS00925;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 198676 199254 . + . ID=gene-LNP58_RS00930;Name=LNP58_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00930;old_locus_tag=LNP58_00930 NZ_CP086372.1 Protein Homology CDS 198676 199254 . + 0 ID=cds-WP_103057327.1;Parent=gene-LNP58_RS00930;Dbxref=Genbank:WP_103057327.1;Name=WP_103057327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155532.1;locus_tag=LNP58_RS00930;product=LysE/ArgO family amino acid transporter;protein_id=WP_103057327.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 199342 199691 . + . ID=gene-LNP58_RS00935;Name=LNP58_RS00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00935;old_locus_tag=LNP58_00935;pseudo=true NZ_CP086372.1 Protein Homology CDS 199342 199691 . + 0 ID=cds-LNP58_RS00935;Parent=gene-LNP58_RS00935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017462820.1;locus_tag=LNP58_RS00935;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 199832 200892 . - . ID=gene-LNP58_RS00940;Name=LNP58_RS00940;end_range=200892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS00940;old_locus_tag=LNP58_00940;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 199832 200892 . - 0 ID=cds-LNP58_RS00940;Parent=gene-LNP58_RS00940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=200892,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924661.1;locus_tag=LNP58_RS00940;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 201048 201254 . - . ID=gene-LNP58_RS00945;Name=LNP58_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00945;old_locus_tag=LNP58_00945 NZ_CP086372.1 Protein Homology CDS 201048 201254 . - 0 ID=cds-WP_011408121.1;Parent=gene-LNP58_RS00945;Dbxref=Genbank:WP_011408121.1;Name=WP_011408121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913665.1;locus_tag=LNP58_RS00945;product=hypothetical protein;protein_id=WP_011408121.1;transl_table=11 NZ_CP086372.1 RefSeq gene 201489 202199 . + . ID=gene-LNP58_RS00950;Name=LNP58_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00950;old_locus_tag=LNP58_00950 NZ_CP086372.1 Protein Homology CDS 201489 202199 . + 0 ID=cds-WP_011408120.1;Parent=gene-LNP58_RS00950;Dbxref=Genbank:WP_011408120.1;Name=WP_011408120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904347.1;locus_tag=LNP58_RS00950;product=rRNA pseudouridine synthase;protein_id=WP_011408120.1;transl_table=11 NZ_CP086372.1 RefSeq gene 203433 204116 . - . ID=gene-LNP58_RS00955;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LNP58_RS00955;old_locus_tag=LNP58_00955 NZ_CP086372.1 Protein Homology CDS 203433 204116 . - 0 ID=cds-WP_011408117.1;Parent=gene-LNP58_RS00955;Dbxref=Genbank:WP_011408117.1;Name=WP_011408117.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165275.1;locus_tag=LNP58_RS00955;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_011408117.1;transl_table=11 NZ_CP086372.1 RefSeq gene 204159 204977 . - . ID=gene-LNP58_RS00960;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LNP58_RS00960;old_locus_tag=LNP58_00960 NZ_CP086372.1 Protein Homology CDS 204159 204977 . - 0 ID=cds-WP_011258440.1;Parent=gene-LNP58_RS00960;Dbxref=Genbank:WP_011258440.1;Name=WP_011258440.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304871.1;locus_tag=LNP58_RS00960;product=tol-pal system protein YbgF;protein_id=WP_011258440.1;transl_table=11 NZ_CP086372.1 RefSeq gene 204984 205502 . - . ID=gene-LNP58_RS00965;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LNP58_RS00965;old_locus_tag=LNP58_00965 NZ_CP086372.1 Protein Homology CDS 204984 205502 . - 0 ID=cds-WP_011408116.1;Parent=gene-LNP58_RS00965;Dbxref=Genbank:WP_011408116.1;Name=WP_011408116.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344309.1;locus_tag=LNP58_RS00965;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_011408116.1;transl_table=11 NZ_CP086372.1 RefSeq gene 205560 206879 . - . ID=gene-LNP58_RS00970;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LNP58_RS00970;old_locus_tag=LNP58_00970 NZ_CP086372.1 Protein Homology CDS 205560 206879 . - 0 ID=cds-WP_041182054.1;Parent=gene-LNP58_RS00970;Dbxref=Genbank:WP_041182054.1;Name=WP_041182054.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445349.1;locus_tag=LNP58_RS00970;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_041182054.1;transl_table=11 NZ_CP086372.1 RefSeq gene 207139 208179 . - . ID=gene-LNP58_RS00975;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LNP58_RS00975;old_locus_tag=LNP58_00975 NZ_CP086372.1 Protein Homology CDS 207139 208179 . - 0 ID=cds-WP_044756956.1;Parent=gene-LNP58_RS00975;Dbxref=Genbank:WP_044756956.1;Name=WP_044756956.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482566.1;locus_tag=LNP58_RS00975;product=cell envelope integrity protein TolA;protein_id=WP_044756956.1;transl_table=11 NZ_CP086372.1 RefSeq gene 208169 208618 . - . ID=gene-LNP58_RS00980;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LNP58_RS00980;old_locus_tag=LNP58_00980 NZ_CP086372.1 Protein Homology CDS 208169 208618 . - 0 ID=cds-WP_011408114.1;Parent=gene-LNP58_RS00980;Dbxref=Genbank:WP_011408114.1;Name=WP_011408114.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913652.1;locus_tag=LNP58_RS00980;product=protein TolR;protein_id=WP_011408114.1;transl_table=11 NZ_CP086372.1 RefSeq gene 208775 209554 . - . ID=gene-LNP58_RS00985;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LNP58_RS00985;old_locus_tag=LNP58_00985 NZ_CP086372.1 Protein Homology CDS 208775 209554 . - 0 ID=cds-WP_012445351.1;Parent=gene-LNP58_RS00985;Dbxref=Genbank:WP_012445351.1;Name=WP_012445351.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913648.1;locus_tag=LNP58_RS00985;product=protein TolQ;protein_id=WP_012445351.1;transl_table=11 NZ_CP086372.1 RefSeq gene 209566 210024 . - . ID=gene-LNP58_RS00990;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LNP58_RS00990;old_locus_tag=LNP58_00990 NZ_CP086372.1 Protein Homology CDS 209566 210024 . - 0 ID=cds-WP_011258434.1;Parent=gene-LNP58_RS00990;Dbxref=Genbank:WP_011258434.1;Name=WP_011258434.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258434.1;locus_tag=LNP58_RS00990;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_011258434.1;transl_table=11 NZ_CP086372.1 RefSeq gene 210077 211114 . - . ID=gene-LNP58_RS00995;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LNP58_RS00995;old_locus_tag=LNP58_00995 NZ_CP086372.1 Protein Homology CDS 210077 211114 . - 0 ID=cds-WP_010363979.1;Parent=gene-LNP58_RS00995;Dbxref=Genbank:WP_010363979.1;Name=WP_010363979.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363979.1;locus_tag=LNP58_RS00995;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_010363979.1;transl_table=11 NZ_CP086372.1 RefSeq gene 211243 213150 . - . ID=gene-LNP58_RS01000;Name=LNP58_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01000;old_locus_tag=LNP58_01000 NZ_CP086372.1 Protein Homology CDS 211243 213150 . - 0 ID=cds-WP_011258433.1;Parent=gene-LNP58_RS01000;Dbxref=Genbank:WP_011258433.1;Name=WP_011258433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156654.1;locus_tag=LNP58_RS01000;product=potassium transporter Kup;protein_id=WP_011258433.1;transl_table=11 NZ_CP086372.1 RefSeq gene 213350 213934 . - . ID=gene-LNP58_RS01005;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LNP58_RS01005;old_locus_tag=LNP58_01005 NZ_CP086372.1 Protein Homology CDS 213350 213934 . - 0 ID=cds-WP_011258432.1;Parent=gene-LNP58_RS01005;Dbxref=Genbank:WP_011258432.1;Name=WP_011258432.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=LNP58_RS01005;product=Holliday junction branch migration protein RuvA;protein_id=WP_011258432.1;transl_table=11 NZ_CP086372.1 RefSeq gene 214092 214616 . - . ID=gene-LNP58_RS01010;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LNP58_RS01010;old_locus_tag=LNP58_01010 NZ_CP086372.1 Protein Homology CDS 214092 214616 . - 0 ID=cds-WP_011258431.1;Parent=gene-LNP58_RS01010;Dbxref=Genbank:WP_011258431.1;Name=WP_011258431.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156655.1;locus_tag=LNP58_RS01010;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_011258431.1;transl_table=11 NZ_CP086372.1 RefSeq gene 214731 215459 . - . ID=gene-LNP58_RS01015;Name=LNP58_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01015;old_locus_tag=LNP58_01015 NZ_CP086372.1 Protein Homology CDS 214731 215459 . - 0 ID=cds-WP_011258430.1;Parent=gene-LNP58_RS01015;Dbxref=Genbank:WP_011258430.1;Name=WP_011258430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052063.1;locus_tag=LNP58_RS01015;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_011258430.1;transl_table=11 NZ_CP086372.1 RefSeq gene 215549 216226 . - . ID=gene-LNP58_RS01020;Name=LNP58_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01020;old_locus_tag=LNP58_01020 NZ_CP086372.1 Protein Homology CDS 215549 216226 . - 0 ID=cds-WP_044756957.1;Parent=gene-LNP58_RS01020;Dbxref=Genbank:WP_044756957.1;Name=WP_044756957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112578.1;locus_tag=LNP58_RS01020;product=alpha/beta hydrolase;protein_id=WP_044756957.1;transl_table=11 NZ_CP086372.1 RefSeq gene 216326 216853 . - . ID=gene-LNP58_RS01025;Name=LNP58_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01025;old_locus_tag=LNP58_01025 NZ_CP086372.1 Protein Homology CDS 216326 216853 . - 0 ID=cds-WP_011258428.1;Parent=gene-LNP58_RS01025;Dbxref=Genbank:WP_011258428.1;Name=WP_011258428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504183.1;locus_tag=LNP58_RS01025;product=N-acetyltransferase;protein_id=WP_011258428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 217365 219131 . - . ID=gene-LNP58_RS01030;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LNP58_RS01030;old_locus_tag=LNP58_01030 NZ_CP086372.1 Protein Homology CDS 217365 219131 . - 0 ID=cds-WP_011408113.1;Parent=gene-LNP58_RS01030;Dbxref=Genbank:WP_011408113.1;Name=WP_011408113.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913642.1;locus_tag=LNP58_RS01030;product=aspartate--tRNA ligase;protein_id=WP_011408113.1;transl_table=11 NZ_CP086372.1 RefSeq gene 219289 220065 . + . ID=gene-LNP58_RS01035;Name=LNP58_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01035;old_locus_tag=LNP58_01035 NZ_CP086372.1 Protein Homology CDS 219289 220065 . + 0 ID=cds-WP_011258426.1;Parent=gene-LNP58_RS01035;Dbxref=Genbank:WP_011258426.1;Name=WP_011258426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156660.1;locus_tag=LNP58_RS01035;product=DUF3011 domain-containing protein;protein_id=WP_011258426.1;transl_table=11 NZ_CP086372.1 RefSeq gene 220563 220856 . - . ID=gene-LNP58_RS01040;Name=LNP58_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01040;old_locus_tag=LNP58_01040 NZ_CP086372.1 Protein Homology CDS 220563 220856 . - 0 ID=cds-WP_011408112.1;Parent=gene-LNP58_RS01040;Dbxref=Genbank:WP_011408112.1;Name=WP_011408112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578079.1;locus_tag=LNP58_RS01040;product=zinc ribbon domain-containing protein;protein_id=WP_011408112.1;transl_table=11 NZ_CP086372.1 RefSeq gene 221297 222535 . + . ID=gene-LNP58_RS01045;Name=LNP58_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01045;old_locus_tag=LNP58_01045 NZ_CP086372.1 Protein Homology CDS 221297 222535 . + 0 ID=cds-WP_011408111.1;Parent=gene-LNP58_RS01045;Dbxref=Genbank:WP_011408111.1;Name=WP_011408111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445363.1;locus_tag=LNP58_RS01045;product=MFS transporter;protein_id=WP_011408111.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 222706 224855 . + . ID=gene-LNP58_RS01050;Name=LNP58_RS01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01050;old_locus_tag=LNP58_01050;pseudo=true NZ_CP086372.1 Protein Homology CDS 222706 224855 . + 0 ID=cds-LNP58_RS01050;Parent=gene-LNP58_RS01050;Note=frameshifted%3B internal stop;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118433.1;locus_tag=LNP58_RS01050;product=phospholipase C%2C phosphocholine-specific;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 225119 226675 . - . ID=gene-LNP58_RS01055;Name=LNP58_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01055;old_locus_tag=LNP58_01055 NZ_CP086372.1 Protein Homology CDS 225119 226675 . - 0 ID=cds-WP_011258422.1;Parent=gene-LNP58_RS01055;Dbxref=Genbank:WP_011258422.1;Name=WP_011258422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156664.1;locus_tag=LNP58_RS01055;product=glycosyltransferase family 39 protein;protein_id=WP_011258422.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 226940 227981 . + . ID=gene-LNP58_RS01060;Name=LNP58_RS01060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01060;old_locus_tag=LNP58_01060;pseudo=true NZ_CP086372.1 Protein Homology CDS 226940 227981 . + 0 ID=cds-LNP58_RS01060;Parent=gene-LNP58_RS01060;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS01060;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 228066 229457 . + . ID=gene-LNP58_RS01065;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LNP58_RS01065;old_locus_tag=LNP58_01065 NZ_CP086372.1 Protein Homology CDS 228066 229457 . + 0 ID=cds-WP_011258418.1;Parent=gene-LNP58_RS01065;Dbxref=Genbank:WP_011258418.1;Name=WP_011258418.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484290.1;locus_tag=LNP58_RS01065;product=DNA repair protein RadA;protein_id=WP_011258418.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 229838 230487 . - . ID=gene-LNP58_RS01070;Name=LNP58_RS01070;end_range=230487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01070;old_locus_tag=LNP58_01070;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 229838 230487 . - 0 ID=cds-LNP58_RS01070;Parent=gene-LNP58_RS01070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=230487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS01070;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 230617 231657 . + . ID=gene-LNP58_RS01075;Name=LNP58_RS01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01075;old_locus_tag=LNP58_01075;pseudo=true NZ_CP086372.1 Protein Homology CDS 230617 231657 . + 0 ID=cds-LNP58_RS01075;Parent=gene-LNP58_RS01075;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS01075;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 232426 234981 . + . ID=gene-LNP58_RS01080;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LNP58_RS01080;old_locus_tag=LNP58_01080 NZ_CP086372.1 Protein Homology CDS 232426 234981 . + 0 ID=cds-WP_011408105.1;Parent=gene-LNP58_RS01080;Dbxref=Genbank:WP_011408105.1;Name=WP_011408105.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484195.1;locus_tag=LNP58_RS01080;product=DNA mismatch repair protein MutS;protein_id=WP_011408105.1;transl_table=11 NZ_CP086372.1 RefSeq gene 235052 235255 . + . ID=gene-LNP58_RS01085;Name=LNP58_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01085;old_locus_tag=LNP58_01085 NZ_CP086372.1 GeneMarkS-2+ CDS 235052 235255 . + 0 ID=cds-WP_012445372.1;Parent=gene-LNP58_RS01085;Dbxref=Genbank:WP_012445372.1;Name=WP_012445372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01085;product=hypothetical protein;protein_id=WP_012445372.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 235252 236844 . + . ID=gene-LNP58_RS01090;Name=LNP58_RS01090;end_range=236844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01090;old_locus_tag=LNP58_01090;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 235252 236844 . + 0 ID=cds-LNP58_RS01090;Parent=gene-LNP58_RS01090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=236844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444487.1;locus_tag=LNP58_RS01090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 236871 237913 . - . ID=gene-LNP58_RS01095;Name=LNP58_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01095;old_locus_tag=LNP58_01095 NZ_CP086372.1 Protein Homology CDS 237718 237913 . - 0 ID=cds-WP_229001932.1;Parent=gene-LNP58_RS01095;Dbxref=Genbank:WP_229001932.1;Name=WP_229001932.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS01095;product=IS3 family transposase;protein_id=WP_229001932.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 236871 237718 . - 2 ID=cds-WP_229001932.1;Parent=gene-LNP58_RS01095;Dbxref=Genbank:WP_229001932.1;Name=WP_229001932.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS01095;product=IS3 family transposase;protein_id=WP_229001932.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 238035 239702 . - . ID=gene-LNP58_RS01100;Name=LNP58_RS01100;end_range=239702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01100;old_locus_tag=LNP58_01100;partial=true;pseudo=true;start_range=.,238035 NZ_CP086372.1 Protein Homology CDS 238035 239702 . - 0 ID=cds-LNP58_RS01100;Parent=gene-LNP58_RS01100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=239702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444473.1;locus_tag=LNP58_RS01100;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,238035;transl_table=11 NZ_CP086372.1 RefSeq gene 239709 240305 . - . ID=gene-LNP58_RS01105;Name=LNP58_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01105;old_locus_tag=LNP58_01105 NZ_CP086372.1 Protein Homology CDS 239709 240305 . - 0 ID=cds-WP_075242341.1;Parent=gene-LNP58_RS01105;Dbxref=Genbank:WP_075242341.1;Name=WP_075242341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025791.2;locus_tag=LNP58_RS01105;product=SUKH-4 family immunity protein;protein_id=WP_075242341.1;transl_table=11 NZ_CP086372.1 RefSeq gene 240298 244881 . - . ID=gene-LNP58_RS01110;Name=LNP58_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01110;old_locus_tag=LNP58_01110 NZ_CP086372.1 Protein Homology CDS 240298 244881 . - 0 ID=cds-WP_228329711.1;Parent=gene-LNP58_RS01110;Dbxref=Genbank:WP_228329711.1;Name=WP_228329711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408101.1;locus_tag=LNP58_RS01110;product=DUF6531 domain-containing protein;protein_id=WP_228329711.1;transl_table=11 NZ_CP086372.1 RefSeq gene 244900 245028 . - . ID=gene-LNP58_RS23385;Name=LNP58_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23385 NZ_CP086372.1 Protein Homology CDS 244900 245028 . - 0 ID=cds-WP_256364562.1;Parent=gene-LNP58_RS23385;Dbxref=Genbank:WP_256364562.1;Name=WP_256364562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300517.1;locus_tag=LNP58_RS23385;product=hypothetical protein;protein_id=WP_256364562.1;transl_table=11 NZ_CP086372.1 RefSeq gene 245025 246644 . - . ID=gene-LNP58_RS01115;Name=LNP58_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01115;old_locus_tag=LNP58_01115 NZ_CP086372.1 Protein Homology CDS 245025 246644 . - 0 ID=cds-WP_041182048.1;Parent=gene-LNP58_RS01115;Dbxref=Genbank:WP_041182048.1;Name=WP_041182048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444471.1;locus_tag=LNP58_RS01115;product=hypothetical protein;protein_id=WP_041182048.1;transl_table=11 NZ_CP086372.1 RefSeq gene 246668 248938 . - . ID=gene-LNP58_RS01120;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LNP58_RS01120;old_locus_tag=LNP58_01120 NZ_CP086372.1 Protein Homology CDS 246668 248938 . - 0 ID=cds-WP_011258406.1;Parent=gene-LNP58_RS01120;Dbxref=Genbank:WP_011258406.1;Name=WP_011258406.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300515.1;locus_tag=LNP58_RS01120;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_011258406.1;transl_table=11 NZ_CP086372.1 RefSeq gene 249139 251019 . - . ID=gene-LNP58_RS01125;Name=LNP58_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01125;old_locus_tag=LNP58_01125 NZ_CP086372.1 Protein Homology CDS 249139 251019 . - 0 ID=cds-WP_162013044.1;Parent=gene-LNP58_RS01125;Dbxref=Genbank:WP_162013044.1;Name=WP_162013044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346766.1;locus_tag=LNP58_RS01125;product=tetratricopeptide repeat protein;protein_id=WP_162013044.1;transl_table=11 NZ_CP086372.1 RefSeq gene 251186 251521 . - . ID=gene-LNP58_RS01130;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LNP58_RS01130;old_locus_tag=LNP58_01130 NZ_CP086372.1 Protein Homology CDS 251186 251521 . - 0 ID=cds-WP_010365831.1;Parent=gene-LNP58_RS01130;Dbxref=Genbank:WP_010365831.1;Name=WP_010365831.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156584.1;locus_tag=LNP58_RS01130;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_010365831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 251521 252153 . - . ID=gene-LNP58_RS01135;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LNP58_RS01135;old_locus_tag=LNP58_01135 NZ_CP086372.1 Protein Homology CDS 251521 252153 . - 0 ID=cds-WP_011258404.1;Parent=gene-LNP58_RS01135;Dbxref=Genbank:WP_011258404.1;Name=WP_011258404.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoC;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851535.1;locus_tag=LNP58_RS01135;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_011258404.1;transl_table=11 NZ_CP086372.1 RefSeq gene 252150 254150 . - . ID=gene-LNP58_RS01140;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LNP58_RS01140;old_locus_tag=LNP58_01140 NZ_CP086372.1 Protein Homology CDS 252150 254150 . - 0 ID=cds-WP_011408097.1;Parent=gene-LNP58_RS01140;Dbxref=Genbank:WP_011408097.1;Name=WP_011408097.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472398.1;locus_tag=LNP58_RS01140;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_011408097.1;transl_table=11 NZ_CP086372.1 RefSeq gene 254150 255085 . - . ID=gene-LNP58_RS01145;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LNP58_RS01145;old_locus_tag=LNP58_01145 NZ_CP086372.1 Protein Homology CDS 254150 255085 . - 0 ID=cds-WP_011258402.1;Parent=gene-LNP58_RS01145;Dbxref=Genbank:WP_011258402.1;Name=WP_011258402.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=LNP58_RS01145;product=ubiquinol oxidase subunit II;protein_id=WP_011258402.1;transl_table=11 NZ_CP086372.1 RefSeq gene 255447 255522 . - . ID=gene-LNP58_RS01150;Name=LNP58_RS01150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS01150;old_locus_tag=LNP58_01150 NZ_CP086372.1 tRNAscan-SE tRNA 255447 255522 . - . ID=rna-LNP58_RS01150;Parent=gene-LNP58_RS01150;anticodon=(pos:complement(255487..255489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS01150;product=tRNA-Thr NZ_CP086372.1 tRNAscan-SE exon 255447 255522 . - . ID=exon-LNP58_RS01150-1;Parent=rna-LNP58_RS01150;anticodon=(pos:complement(255487..255489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS01150;product=tRNA-Thr NZ_CP086372.1 RefSeq gene 255599 256549 . - . ID=gene-LNP58_RS01155;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LNP58_RS01155;old_locus_tag=LNP58_01155 NZ_CP086372.1 Protein Homology CDS 255599 256549 . - 0 ID=cds-WP_011258401.1;Parent=gene-LNP58_RS01155;Dbxref=Genbank:WP_011258401.1;Name=WP_011258401.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258401.1;locus_tag=LNP58_RS01155;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011258401.1;transl_table=11 NZ_CP086372.1 RefSeq gene 256638 257138 . - . ID=gene-LNP58_RS01160;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LNP58_RS01160;old_locus_tag=LNP58_01160 NZ_CP086372.1 Protein Homology CDS 256638 257138 . - 0 ID=cds-WP_011408096.1;Parent=gene-LNP58_RS01160;Dbxref=Genbank:WP_011408096.1;Name=WP_011408096.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408096.1;locus_tag=LNP58_RS01160;product=signal peptidase II;protein_id=WP_011408096.1;transl_table=11 NZ_CP086372.1 RefSeq gene 257453 260284 . - . ID=gene-LNP58_RS01165;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LNP58_RS01165;old_locus_tag=LNP58_01165 NZ_CP086372.1 Protein Homology CDS 257453 260284 . - 0 ID=cds-WP_011258399.1;Parent=gene-LNP58_RS01165;Dbxref=Genbank:WP_011258399.1;Name=WP_011258399.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928804.1;locus_tag=LNP58_RS01165;product=isoleucine--tRNA ligase;protein_id=WP_011258399.1;transl_table=11 NZ_CP086372.1 RefSeq gene 260291 261307 . - . ID=gene-LNP58_RS01170;Name=LNP58_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01170;old_locus_tag=LNP58_01170 NZ_CP086372.1 Protein Homology CDS 260291 261307 . - 0 ID=cds-WP_011408095.1;Parent=gene-LNP58_RS01170;Dbxref=Genbank:WP_011408095.1;Name=WP_011408095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165409.1;locus_tag=LNP58_RS01170;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_011408095.1;transl_table=11 NZ_CP086372.1 RefSeq gene 261506 263110 . - . ID=gene-LNP58_RS01175;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LNP58_RS01175;old_locus_tag=LNP58_01175 NZ_CP086372.1 Protein Homology CDS 261506 263110 . - 0 ID=cds-WP_011408094.1;Parent=gene-LNP58_RS01175;Dbxref=Genbank:WP_011408094.1;Name=WP_011408094.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=LNP58_RS01175;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_011408094.1;transl_table=11 NZ_CP086372.1 RefSeq gene 263227 263496 . + . ID=gene-LNP58_RS01180;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LNP58_RS01180;old_locus_tag=LNP58_01180 NZ_CP086372.1 Protein Homology CDS 263227 263496 . + 0 ID=cds-WP_003484323.1;Parent=gene-LNP58_RS01180;Dbxref=Genbank:WP_003484323.1;Name=WP_003484323.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184515.1;locus_tag=LNP58_RS01180;product=30S ribosomal protein S20;protein_id=WP_003484323.1;transl_table=11 NZ_CP086372.1 RefSeq gene 263588 264640 . - . ID=gene-LNP58_RS01185;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LNP58_RS01185;old_locus_tag=LNP58_01185 NZ_CP086372.1 Protein Homology CDS 263588 264640 . - 0 ID=cds-WP_011258396.1;Parent=gene-LNP58_RS01185;Dbxref=Genbank:WP_011258396.1;Name=WP_011258396.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036350.1;locus_tag=LNP58_RS01185;product=GTPase ObgE;protein_id=WP_011258396.1;transl_table=11 NZ_CP086372.1 RefSeq gene 264873 265133 . - . ID=gene-LNP58_RS01190;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LNP58_RS01190;old_locus_tag=LNP58_01190 NZ_CP086372.1 Protein Homology CDS 264873 265133 . - 0 ID=cds-WP_011258395.1;Parent=gene-LNP58_RS01190;Dbxref=Genbank:WP_011258395.1;Name=WP_011258395.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534652.1;locus_tag=LNP58_RS01190;product=50S ribosomal protein L27;protein_id=WP_011258395.1;transl_table=11 NZ_CP086372.1 RefSeq gene 265146 265466 . - . ID=gene-LNP58_RS01195;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LNP58_RS01195;old_locus_tag=LNP58_01195 NZ_CP086372.1 Protein Homology CDS 265146 265466 . - 0 ID=cds-WP_011258394.1;Parent=gene-LNP58_RS01195;Dbxref=Genbank:WP_011258394.1;Name=WP_011258394.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484328.1;locus_tag=LNP58_RS01195;product=50S ribosomal protein L21;protein_id=WP_011258394.1;transl_table=11 NZ_CP086372.1 RefSeq gene 265759 268725 . + . ID=gene-LNP58_RS01200;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LNP58_RS01200;old_locus_tag=LNP58_01200 NZ_CP086372.1 Protein Homology CDS 265759 268725 . + 0 ID=cds-WP_012444462.1;Parent=gene-LNP58_RS01200;Dbxref=Genbank:WP_012444462.1;Name=WP_012444462.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504280.1;locus_tag=LNP58_RS01200;product=excinuclease ABC subunit UvrA;protein_id=WP_012444462.1;transl_table=11 NZ_CP086372.1 RefSeq gene 268725 269129 . + . ID=gene-LNP58_RS01205;Name=LNP58_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01205;old_locus_tag=LNP58_01205 NZ_CP086372.1 Protein Homology CDS 268725 269129 . + 0 ID=cds-WP_011258393.1;Parent=gene-LNP58_RS01205;Dbxref=Genbank:WP_011258393.1;Name=WP_011258393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989963.1;locus_tag=LNP58_RS01205;product=thioesterase family protein;protein_id=WP_011258393.1;transl_table=11 NZ_CP086372.1 RefSeq gene 269243 269707 . - . ID=gene-LNP58_RS01210;Name=LNP58_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01210;old_locus_tag=LNP58_01210 NZ_CP086372.1 Protein Homology CDS 269243 269707 . - 0 ID=cds-WP_011258392.1;Parent=gene-LNP58_RS01210;Dbxref=Genbank:WP_011258392.1;Name=WP_011258392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346748.1;locus_tag=LNP58_RS01210;product=copper chaperone PCu(A)C;protein_id=WP_011258392.1;transl_table=11 NZ_CP086372.1 RefSeq gene 269731 270501 . + . ID=gene-LNP58_RS01215;Name=LNP58_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01215;old_locus_tag=LNP58_01215 NZ_CP086372.1 Protein Homology CDS 269731 270501 . + 0 ID=cds-WP_011408091.1;Parent=gene-LNP58_RS01215;Dbxref=Genbank:WP_011408091.1;Name=WP_011408091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156572.1;locus_tag=LNP58_RS01215;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_011408091.1;transl_table=11 NZ_CP086372.1 RefSeq gene 270572 271477 . + . ID=gene-LNP58_RS01220;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=LNP58_RS01220;old_locus_tag=LNP58_01220 NZ_CP086372.1 Protein Homology CDS 270572 271477 . + 0 ID=cds-WP_011408090.1;Parent=gene-LNP58_RS01220;Dbxref=Genbank:WP_011408090.1;Name=WP_011408090.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850289.1;locus_tag=LNP58_RS01220;product=acyl-CoA thioesterase II;protein_id=WP_011408090.1;transl_table=11 NZ_CP086372.1 RefSeq gene 271705 272208 . + . ID=gene-LNP58_RS01225;Name=LNP58_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01225;old_locus_tag=LNP58_01225 NZ_CP086372.1 Protein Homology CDS 271705 272208 . + 0 ID=cds-WP_011408089.1;Parent=gene-LNP58_RS01225;Dbxref=Genbank:WP_011408089.1;Name=WP_011408089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156570.1;locus_tag=LNP58_RS01225;product=hypothetical protein;protein_id=WP_011408089.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 272320 272980 . + . ID=gene-LNP58_RS01230;Name=LNP58_RS01230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01230;old_locus_tag=LNP58_01230;pseudo=true NZ_CP086372.1 Protein Homology CDS 272320 272980 . + 0 ID=cds-LNP58_RS01230;Parent=gene-LNP58_RS01230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156569.1;locus_tag=LNP58_RS01230;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 273288 273773 . + . ID=gene-LNP58_RS01235;Name=LNP58_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01235;old_locus_tag=LNP58_01235 NZ_CP086372.1 Protein Homology CDS 273288 273773 . + 0 ID=cds-WP_011258387.1;Parent=gene-LNP58_RS01235;Dbxref=Genbank:WP_011258387.1;Name=WP_011258387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167060.1;locus_tag=LNP58_RS01235;product=hypothetical protein;protein_id=WP_011258387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 273918 274716 . - . ID=gene-LNP58_RS01240;Name=LNP58_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01240;old_locus_tag=LNP58_01240 NZ_CP086372.1 Protein Homology CDS 274445 274716 . - 0 ID=cds-WP_109181906.1;Parent=gene-LNP58_RS01240;Dbxref=Genbank:WP_109181906.1;Name=WP_109181906.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS01240;product=IS5 family transposase;protein_id=WP_109181906.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 273918 274446 . - 1 ID=cds-WP_109181906.1;Parent=gene-LNP58_RS01240;Dbxref=Genbank:WP_109181906.1;Name=WP_109181906.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS01240;product=IS5 family transposase;protein_id=WP_109181906.1;transl_table=11 NZ_CP086372.1 RefSeq gene 274759 275340 . - . ID=gene-LNP58_RS01245;Name=LNP58_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01245;old_locus_tag=LNP58_01245 NZ_CP086372.1 Protein Homology CDS 274759 275340 . - 0 ID=cds-WP_011408086.1;Parent=gene-LNP58_RS01245;Dbxref=Genbank:WP_011408086.1;Name=WP_011408086.1;Ontology_term=GO:0005509;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156567.1;locus_tag=LNP58_RS01245;product=EF-hand domain-containing protein;protein_id=WP_011408086.1;transl_table=11 NZ_CP086372.1 RefSeq gene 275401 276315 . + . ID=gene-LNP58_RS01250;Name=LNP58_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01250;old_locus_tag=LNP58_01250 NZ_CP086372.1 Protein Homology CDS 275401 276315 . + 0 ID=cds-WP_042464672.1;Parent=gene-LNP58_RS01250;Dbxref=Genbank:WP_042464672.1;Name=WP_042464672.1;Ontology_term=GO:0016598,GO:0004057,GO:0008914;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA,leucyltransferase activity|0008914||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158643.1;locus_tag=LNP58_RS01250;product=arginyltransferase;protein_id=WP_042464672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 276269 277600 . + . ID=gene-LNP58_RS01255;Name=LNP58_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01255;old_locus_tag=LNP58_01255 NZ_CP086372.1 Protein Homology CDS 276269 277600 . + 0 ID=cds-WP_027703288.1;Parent=gene-LNP58_RS01255;Dbxref=Genbank:WP_027703288.1;Name=WP_027703288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371500.1;locus_tag=LNP58_RS01255;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_027703288.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 277607 277819 . - . ID=gene-LNP58_RS01260;Name=LNP58_RS01260;end_range=277819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01260;old_locus_tag=LNP58_01260;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 277607 277819 . - 0 ID=cds-LNP58_RS01260;Parent=gene-LNP58_RS01260;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=277819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS01260;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 277905 279506 . - . ID=gene-LNP58_RS01265;Name=LNP58_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01265;old_locus_tag=LNP58_01265 NZ_CP086372.1 Protein Homology CDS 277905 279506 . - 0 ID=cds-WP_011258382.1;Parent=gene-LNP58_RS01265;Dbxref=Genbank:WP_011258382.1;Name=WP_011258382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156983.1;locus_tag=LNP58_RS01265;product=membrane protein;protein_id=WP_011258382.1;transl_table=11 NZ_CP086372.1 RefSeq gene 279883 281028 . + . ID=gene-LNP58_RS01270;Name=LNP58_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01270;old_locus_tag=LNP58_01270 NZ_CP086372.1 Protein Homology CDS 279883 281028 . + 0 ID=cds-WP_228329710.1;Parent=gene-LNP58_RS01270;Dbxref=Genbank:WP_228329710.1;Name=WP_228329710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408083.1;locus_tag=LNP58_RS01270;product=aldose 1-epimerase family protein;protein_id=WP_228329710.1;transl_table=11 NZ_CP086372.1 RefSeq gene 281124 281597 . - . ID=gene-LNP58_RS01275;Name=LNP58_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01275;old_locus_tag=LNP58_01275 NZ_CP086372.1 Protein Homology CDS 281124 281597 . - 0 ID=cds-WP_011408082.1;Parent=gene-LNP58_RS01275;Dbxref=Genbank:WP_011408082.1;Name=WP_011408082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156981.1;locus_tag=LNP58_RS01275;product=DUF3574 domain-containing protein;protein_id=WP_011408082.1;transl_table=11 NZ_CP086372.1 RefSeq gene 281833 284268 . + . ID=gene-LNP58_RS01280;Name=LNP58_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01280;old_locus_tag=LNP58_01280 NZ_CP086372.1 Protein Homology CDS 281833 284268 . + 0 ID=cds-WP_011408081.1;Parent=gene-LNP58_RS01280;Dbxref=Genbank:WP_011408081.1;Name=WP_011408081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158509.1;locus_tag=LNP58_RS01280;product=TonB-dependent receptor;protein_id=WP_011408081.1;transl_table=11 NZ_CP086372.1 RefSeq gene 284742 285365 . + . ID=gene-LNP58_RS01285;Name=LNP58_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01285;old_locus_tag=LNP58_01285 NZ_CP086372.1 Protein Homology CDS 284742 285365 . + 0 ID=cds-WP_228329709.1;Parent=gene-LNP58_RS01285;Dbxref=Genbank:WP_228329709.1;Name=WP_228329709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303881.1;locus_tag=LNP58_RS01285;product=hypothetical protein;protein_id=WP_228329709.1;transl_table=11 NZ_CP086372.1 RefSeq gene 285591 286349 . + . ID=gene-LNP58_RS01290;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LNP58_RS01290;old_locus_tag=LNP58_01290 NZ_CP086372.1 Protein Homology CDS 285591 286349 . + 0 ID=cds-WP_041182043.1;Parent=gene-LNP58_RS01290;Dbxref=Genbank:WP_041182043.1;Name=WP_041182043.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156980.1;locus_tag=LNP58_RS01290;product=trehalose-phosphatase;protein_id=WP_041182043.1;transl_table=11 NZ_CP086372.1 RefSeq gene 286394 288172 . + . ID=gene-LNP58_RS01295;Name=LNP58_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01295;old_locus_tag=LNP58_01295 NZ_CP086372.1 Protein Homology CDS 286394 288172 . + 0 ID=cds-WP_011408078.1;Parent=gene-LNP58_RS01295;Dbxref=Genbank:WP_011408078.1;Name=WP_011408078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901287.1;locus_tag=LNP58_RS01295;product=glycoside hydrolase family 15 protein;protein_id=WP_011408078.1;transl_table=11 NZ_CP086372.1 RefSeq gene 288169 289536 . + . ID=gene-LNP58_RS01300;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LNP58_RS01300;old_locus_tag=LNP58_01300 NZ_CP086372.1 Protein Homology CDS 288169 289536 . + 0 ID=cds-WP_011258376.1;Parent=gene-LNP58_RS01300;Dbxref=Genbank:WP_011258376.1;Name=WP_011258376.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156978.1;locus_tag=LNP58_RS01300;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_011258376.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 289761 290154 . - . ID=gene-LNP58_RS01305;Name=LNP58_RS01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01305;old_locus_tag=LNP58_01305;pseudo=true NZ_CP086372.1 Protein Homology CDS 289761 290154 . - 0 ID=cds-LNP58_RS01305;Parent=gene-LNP58_RS01305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052111.1;locus_tag=LNP58_RS01305;product=thiol-disulfide oxidoreductase DCC family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 290141 290665 . - . ID=gene-LNP58_RS01310;Name=LNP58_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01310;old_locus_tag=LNP58_01310 NZ_CP086372.1 Protein Homology CDS 290141 290665 . - 0 ID=cds-WP_027703285.1;Parent=gene-LNP58_RS01310;Dbxref=Genbank:WP_027703285.1;Name=WP_027703285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303877.1;locus_tag=LNP58_RS01310;product=DUF4166 domain-containing protein;protein_id=WP_027703285.1;transl_table=11 NZ_CP086372.1 RefSeq gene 290668 291474 . - . ID=gene-LNP58_RS01315;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LNP58_RS01315;old_locus_tag=LNP58_01315 NZ_CP086372.1 Protein Homology CDS 290668 291474 . - 0 ID=cds-WP_011258372.1;Parent=gene-LNP58_RS01315;Dbxref=Genbank:WP_011258372.1;Name=WP_011258372.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444451.1;locus_tag=LNP58_RS01315;product=peptidoglycan editing factor PgeF;protein_id=WP_011258372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 291482 292477 . - . ID=gene-LNP58_RS01320;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LNP58_RS01320;old_locus_tag=LNP58_01320 NZ_CP086372.1 Protein Homology CDS 291482 292477 . - 0 ID=cds-WP_011408077.1;Parent=gene-LNP58_RS01320;Dbxref=Genbank:WP_011408077.1;Name=WP_011408077.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444450.1;locus_tag=LNP58_RS01320;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_011408077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 292598 293479 . + . ID=gene-LNP58_RS01325;Name=LNP58_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01325;old_locus_tag=LNP58_01325 NZ_CP086372.1 Protein Homology CDS 292598 293479 . + 0 ID=cds-WP_011258370.1;Parent=gene-LNP58_RS01325;Dbxref=Genbank:WP_011258370.1;Name=WP_011258370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155156.1;locus_tag=LNP58_RS01325;product=outer membrane protein assembly factor BamD;protein_id=WP_011258370.1;transl_table=11 NZ_CP086372.1 RefSeq gene 293637 295292 . - . ID=gene-LNP58_RS01330;Name=LNP58_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01330;old_locus_tag=LNP58_01330 NZ_CP086372.1 Protein Homology CDS 293637 295292 . - 0 ID=cds-WP_075242270.1;Parent=gene-LNP58_RS01330;Dbxref=Genbank:WP_075242270.1;Name=WP_075242270.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300805.1;locus_tag=LNP58_RS01330;product=NAD+ synthase;protein_id=WP_075242270.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 295292 295439 . - . ID=gene-LNP58_RS01335;Name=LNP58_RS01335;end_range=295439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01335;old_locus_tag=LNP58_01335;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 295292 295439 . - 0 ID=cds-LNP58_RS01335;Parent=gene-LNP58_RS01335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=295439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366207.1;locus_tag=LNP58_RS01335;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 295724 296020 . - . ID=gene-LNP58_RS01340;Name=LNP58_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01340;old_locus_tag=LNP58_01340 NZ_CP086372.1 GeneMarkS-2+ CDS 295724 296020 . - 0 ID=cds-WP_011408075.1;Parent=gene-LNP58_RS01340;Dbxref=Genbank:WP_011408075.1;Name=WP_011408075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01340;product=hypothetical protein;protein_id=WP_011408075.1;transl_table=11 NZ_CP086372.1 RefSeq gene 296340 297215 . - . ID=gene-LNP58_RS01345;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LNP58_RS01345;old_locus_tag=LNP58_01345 NZ_CP086372.1 Protein Homology CDS 296340 297215 . - 0 ID=cds-WP_011258368.1;Parent=gene-LNP58_RS01345;Dbxref=Genbank:WP_011258368.1;Name=WP_011258368.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812253.1;locus_tag=LNP58_RS01345;product=succinate--CoA ligase subunit alpha;protein_id=WP_011258368.1;transl_table=11 NZ_CP086372.1 RefSeq gene 297240 298409 . - . ID=gene-LNP58_RS01350;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LNP58_RS01350;old_locus_tag=LNP58_01350 NZ_CP086372.1 Protein Homology CDS 297240 298409 . - 0 ID=cds-WP_011258367.1;Parent=gene-LNP58_RS01350;Dbxref=Genbank:WP_011258367.1;Name=WP_011258367.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183942.1;locus_tag=LNP58_RS01350;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_011258367.1;transl_table=11 NZ_CP086372.1 RefSeq gene 298643 300256 . + . ID=gene-LNP58_RS01355;Name=LNP58_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01355;old_locus_tag=LNP58_01355 NZ_CP086372.1 Protein Homology CDS 298643 300256 . + 0 ID=cds-WP_011258366.1;Parent=gene-LNP58_RS01355;Dbxref=Genbank:WP_011258366.1;Name=WP_011258366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=LNP58_RS01355;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_011258366.1;transl_table=11 NZ_CP086372.1 RefSeq gene 300587 301978 . + . ID=gene-LNP58_RS01360;Name=LNP58_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01360;old_locus_tag=LNP58_01360 NZ_CP086372.1 Protein Homology CDS 300587 301978 . + 0 ID=cds-WP_033013168.1;Parent=gene-LNP58_RS01360;Dbxref=Genbank:WP_033013168.1;Name=WP_033013168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094694.1;locus_tag=LNP58_RS01360;product=sigma-54 dependent transcriptional regulator;protein_id=WP_033013168.1;transl_table=11 NZ_CP086372.1 RefSeq gene 302051 302257 . + . ID=gene-LNP58_RS01365;Name=LNP58_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01365;old_locus_tag=LNP58_01365 NZ_CP086372.1 Protein Homology CDS 302051 302257 . + 0 ID=cds-WP_027703281.1;Parent=gene-LNP58_RS01365;Dbxref=Genbank:WP_027703281.1;Name=WP_027703281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812262.1;locus_tag=LNP58_RS01365;product=DUF2559 family protein;protein_id=WP_027703281.1;transl_table=11 NZ_CP086372.1 RefSeq gene 302319 302480 . + . ID=gene-LNP58_RS01370;Name=LNP58_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01370;old_locus_tag=LNP58_01370 NZ_CP086372.1 GeneMarkS-2+ CDS 302319 302480 . + 0 ID=cds-WP_153296778.1;Parent=gene-LNP58_RS01370;Dbxref=Genbank:WP_153296778.1;Name=WP_153296778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01370;product=hypothetical protein;protein_id=WP_153296778.1;transl_table=11 NZ_CP086372.1 RefSeq gene 302550 302828 . + . ID=gene-LNP58_RS01375;Name=LNP58_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01375;old_locus_tag=LNP58_01375 NZ_CP086372.1 Protein Homology CDS 302550 302828 . + 0 ID=cds-WP_229001933.1;Parent=gene-LNP58_RS01375;Dbxref=Genbank:WP_229001933.1;Name=WP_229001933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LNP58_RS01375;product=Fic family protein;protein_id=WP_229001933.1;transl_table=11 NZ_CP086372.1 RefSeq gene 302837 304570 . - . ID=gene-LNP58_RS01380;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=LNP58_RS01380;old_locus_tag=LNP58_01380 NZ_CP086372.1 Protein Homology CDS 302837 304570 . - 0 ID=cds-WP_011408072.1;Parent=gene-LNP58_RS01380;Dbxref=Genbank:WP_011408072.1;Name=WP_011408072.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437606.1;locus_tag=LNP58_RS01380;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_011408072.1;transl_table=11 NZ_CP086372.1 RefSeq gene 304605 306104 . - . ID=gene-LNP58_RS01385;Name=LNP58_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01385;old_locus_tag=LNP58_01385 NZ_CP086372.1 Protein Homology CDS 304605 306104 . - 0 ID=cds-WP_228329708.1;Parent=gene-LNP58_RS01385;Dbxref=Genbank:WP_228329708.1;Name=WP_228329708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437605.1;locus_tag=LNP58_RS01385;product=hypothetical protein;protein_id=WP_228329708.1;transl_table=11 NZ_CP086372.1 RefSeq gene 306101 306670 . - . ID=gene-LNP58_RS01390;Name=LNP58_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01390;old_locus_tag=LNP58_01390 NZ_CP086372.1 Protein Homology CDS 306101 306670 . - 0 ID=cds-WP_229001934.1;Parent=gene-LNP58_RS01390;Dbxref=Genbank:WP_229001934.1;Name=WP_229001934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504321.1;locus_tag=LNP58_RS01390;product=hypothetical protein;protein_id=WP_229001934.1;transl_table=11 NZ_CP086372.1 RefSeq gene 306741 308330 . - . ID=gene-LNP58_RS01395;Name=LNP58_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01395;old_locus_tag=LNP58_01395 NZ_CP086372.1 Protein Homology CDS 306741 308330 . - 0 ID=cds-WP_011408069.1;Parent=gene-LNP58_RS01395;Dbxref=Genbank:WP_011408069.1;Name=WP_011408069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504322.1;locus_tag=LNP58_RS01395;product=phosphoethanolamine transferase;protein_id=WP_011408069.1;transl_table=11 NZ_CP086372.1 RefSeq gene 308465 308890 . - . ID=gene-LNP58_RS01400;Name=LNP58_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01400;old_locus_tag=LNP58_01400 NZ_CP086372.1 Protein Homology CDS 308465 308890 . - 0 ID=cds-WP_011408068.1;Parent=gene-LNP58_RS01400;Dbxref=Genbank:WP_011408068.1;Name=WP_011408068.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363792.1;locus_tag=LNP58_RS01400;product=pilin;protein_id=WP_011408068.1;transl_table=11 NZ_CP086372.1 RefSeq gene 309245 310504 . + . ID=gene-LNP58_RS01405;Name=LNP58_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01405;old_locus_tag=LNP58_01405 NZ_CP086372.1 Protein Homology CDS 309245 310504 . + 0 ID=cds-WP_011408067.1;Parent=gene-LNP58_RS01405;Dbxref=Genbank:WP_011408067.1;Name=WP_011408067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437601.1;locus_tag=LNP58_RS01405;product=type II secretion system F family protein;protein_id=WP_011408067.1;transl_table=11 NZ_CP086372.1 RefSeq gene 310511 311374 . + . ID=gene-LNP58_RS01410;Name=LNP58_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01410;old_locus_tag=LNP58_01410 NZ_CP086372.1 Protein Homology CDS 310511 311374 . + 0 ID=cds-WP_011258358.1;Parent=gene-LNP58_RS01410;Dbxref=Genbank:WP_011258358.1;Name=WP_011258358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302544.1;locus_tag=LNP58_RS01410;product=A24 family peptidase;protein_id=WP_011258358.1;transl_table=11 NZ_CP086372.1 RefSeq gene 311388 311996 . + . ID=gene-LNP58_RS01415;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LNP58_RS01415;old_locus_tag=LNP58_01415 NZ_CP086372.1 Protein Homology CDS 311388 311996 . + 0 ID=cds-WP_011258357.1;Parent=gene-LNP58_RS01415;Dbxref=Genbank:WP_011258357.1;Name=WP_011258357.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258357.1;locus_tag=LNP58_RS01415;product=dephospho-CoA kinase;protein_id=WP_011258357.1;transl_table=11 NZ_CP086372.1 RefSeq gene 312067 313386 . + . ID=gene-LNP58_RS01420;Name=LNP58_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01420;old_locus_tag=LNP58_01420 NZ_CP086372.1 Protein Homology CDS 312067 313386 . + 0 ID=cds-WP_115801881.1;Parent=gene-LNP58_RS01420;Dbxref=Genbank:WP_115801881.1;Name=WP_115801881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS01420;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801881.1;transl_table=11 NZ_CP086372.1 RefSeq gene 313947 314249 . - . ID=gene-LNP58_RS01425;Name=LNP58_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01425;old_locus_tag=LNP58_01425 NZ_CP086372.1 Protein Homology CDS 313947 314249 . - 0 ID=cds-WP_158645227.1;Parent=gene-LNP58_RS01425;Dbxref=Genbank:WP_158645227.1;Name=WP_158645227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026861.2;locus_tag=LNP58_RS01425;product=hypothetical protein;protein_id=WP_158645227.1;transl_table=11 NZ_CP086372.1 RefSeq gene 314233 315189 . - . ID=gene-LNP58_RS01430;Name=LNP58_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01430;old_locus_tag=LNP58_01430 NZ_CP086372.1 Protein Homology CDS 314233 315189 . - 0 ID=cds-WP_041182041.1;Parent=gene-LNP58_RS01430;Dbxref=Genbank:WP_041182041.1;Name=WP_041182041.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS01430;product=IS30-like element IS1112a family transposase;protein_id=WP_041182041.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 315279 315500 . - . ID=gene-LNP58_RS01435;Name=LNP58_RS01435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01435;old_locus_tag=LNP58_01435;partial=true;pseudo=true;start_range=.,315279 NZ_CP086372.1 Protein Homology CDS 315279 315500 . - 0 ID=cds-LNP58_RS01435;Parent=gene-LNP58_RS01435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1;locus_tag=LNP58_RS01435;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,315279;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 315618 315785 . - . ID=gene-LNP58_RS01440;Name=LNP58_RS01440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01440;old_locus_tag=LNP58_01440;partial=true;pseudo=true;start_range=.,315618 NZ_CP086372.1 Protein Homology CDS 315618 315785 . - 0 ID=cds-LNP58_RS01440;Parent=gene-LNP58_RS01440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=LNP58_RS01440;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,315618;transl_table=11 NZ_CP086372.1 RefSeq gene 315881 316849 . + . ID=gene-LNP58_RS01445;Name=LNP58_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01445;old_locus_tag=LNP58_01445 NZ_CP086372.1 Protein Homology CDS 315881 316849 . + 0 ID=cds-WP_011258802.1;Parent=gene-LNP58_RS01445;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS01445;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 317064 318032 . + . ID=gene-LNP58_RS01450;Name=LNP58_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01450;old_locus_tag=LNP58_01450 NZ_CP086372.1 Protein Homology CDS 317064 318032 . + 0 ID=cds-WP_011258802.1-2;Parent=gene-LNP58_RS01450;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS01450;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 318179 318547 . - . ID=gene-LNP58_RS01455;Name=LNP58_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01455;old_locus_tag=LNP58_01455 NZ_CP086372.1 Protein Homology CDS 318179 318547 . - 0 ID=cds-WP_011408064.1;Parent=gene-LNP58_RS01455;Dbxref=Genbank:WP_011408064.1;Name=WP_011408064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448936.1;locus_tag=LNP58_RS01455;product=hypothetical protein;protein_id=WP_011408064.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 318553 319986 . - . ID=gene-LNP58_RS01460;Name=LNP58_RS01460;end_range=319986,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01460;old_locus_tag=LNP58_01460;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 318553 319986 . - 0 ID=cds-LNP58_RS01460;Parent=gene-LNP58_RS01460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=319986,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444433.1;locus_tag=LNP58_RS01460;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 320063 320392 . - . ID=gene-LNP58_RS01465;Name=LNP58_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01465;old_locus_tag=LNP58_01465 NZ_CP086372.1 GeneMarkS-2+ CDS 320063 320392 . - 0 ID=cds-WP_125168748.1;Parent=gene-LNP58_RS01465;Dbxref=Genbank:WP_125168748.1;Name=WP_125168748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01465;product=hypothetical protein;protein_id=WP_125168748.1;transl_table=11 NZ_CP086372.1 RefSeq gene 320389 320688 . - . ID=gene-LNP58_RS01470;Name=LNP58_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01470;old_locus_tag=LNP58_01470 NZ_CP086372.1 GeneMarkS-2+ CDS 320389 320688 . - 0 ID=cds-WP_143699999.1;Parent=gene-LNP58_RS01470;Dbxref=Genbank:WP_143699999.1;Name=WP_143699999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01470;product=hypothetical protein;protein_id=WP_143699999.1;transl_table=11 NZ_CP086372.1 RefSeq gene 320837 321805 . - . ID=gene-LNP58_RS01475;Name=LNP58_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01475;old_locus_tag=LNP58_01475 NZ_CP086372.1 Protein Homology CDS 320837 321805 . - 0 ID=cds-WP_011258803.1-2;Parent=gene-LNP58_RS01475;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS01475;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 321857 322348 . - . ID=gene-LNP58_RS01480;Name=LNP58_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01480;old_locus_tag=LNP58_01480 NZ_CP086372.1 GeneMarkS-2+ CDS 321857 322348 . - 0 ID=cds-WP_125168746.1;Parent=gene-LNP58_RS01480;Dbxref=Genbank:WP_125168746.1;Name=WP_125168746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01480;product=hypothetical protein;protein_id=WP_125168746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 322345 326835 . - . ID=gene-LNP58_RS01485;Name=LNP58_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01485;old_locus_tag=LNP58_01485 NZ_CP086372.1 Protein Homology CDS 322345 326835 . - 0 ID=cds-WP_011408063.1;Parent=gene-LNP58_RS01485;Dbxref=Genbank:WP_011408063.1;Name=WP_011408063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258350.1;locus_tag=LNP58_RS01485;product=RHS repeat protein;protein_id=WP_011408063.1;transl_table=11 NZ_CP086372.1 RefSeq gene 326960 327995 . - . ID=gene-LNP58_RS01490;Name=LNP58_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01490;old_locus_tag=LNP58_01490 NZ_CP086372.1 Protein Homology CDS 327165 327995 . - 0 ID=cds-WP_220123696.1;Parent=gene-LNP58_RS01490;Dbxref=Genbank:WP_220123696.1;Name=WP_220123696.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=LNP58_RS01490;product=IS5 family transposase;protein_id=WP_220123696.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 326960 327163 . - 0 ID=cds-WP_220123696.1;Parent=gene-LNP58_RS01490;Dbxref=Genbank:WP_220123696.1;Name=WP_220123696.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=LNP58_RS01490;product=IS5 family transposase;protein_id=WP_220123696.1;transl_table=11 NZ_CP086372.1 RefSeq gene 328133 329452 . + . ID=gene-LNP58_RS01495;Name=LNP58_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01495;old_locus_tag=LNP58_01495 NZ_CP086372.1 Protein Homology CDS 328133 329452 . + 0 ID=cds-WP_228329707.1;Parent=gene-LNP58_RS01495;Dbxref=Genbank:WP_228329707.1;Name=WP_228329707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS01495;product=IS701-like element ISXo15 family transposase;protein_id=WP_228329707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 329495 330258 . + . ID=gene-LNP58_RS01500;Name=LNP58_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01500;old_locus_tag=LNP58_01500 NZ_CP086372.1 Protein Homology CDS 329495 329810 . + 0 ID=cds-WP_094187782.1-3;Parent=gene-LNP58_RS01500;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS01500;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 329810 330258 . + 2 ID=cds-WP_094187782.1-3;Parent=gene-LNP58_RS01500;Dbxref=Genbank:WP_094187782.1;Name=WP_094187782.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS01500;product=IS5 family transposase;protein_id=WP_094187782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 330334 332166 . - . ID=gene-LNP58_RS01505;Name=LNP58_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01505;old_locus_tag=LNP58_01505 NZ_CP086372.1 Protein Homology CDS 330334 332166 . - 0 ID=cds-WP_069959790.1;Parent=gene-LNP58_RS01505;Dbxref=Genbank:WP_069959790.1;Name=WP_069959790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377503.1;locus_tag=LNP58_RS01505;product=ABC transporter ATP-binding protein;protein_id=WP_069959790.1;transl_table=11 NZ_CP086372.1 RefSeq gene 332298 332888 . - . ID=gene-LNP58_RS01510;Name=LNP58_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01510;old_locus_tag=LNP58_01510 NZ_CP086372.1 Protein Homology CDS 332298 332888 . - 0 ID=cds-WP_069960188.1;Parent=gene-LNP58_RS01510;Dbxref=Genbank:WP_069960188.1;Name=WP_069960188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487596.1;locus_tag=LNP58_RS01510;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_069960188.1;transl_table=11 NZ_CP086372.1 RefSeq gene 332954 336010 . - . ID=gene-LNP58_RS01515;Name=LNP58_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01515;old_locus_tag=LNP58_01515 NZ_CP086372.1 Protein Homology CDS 332954 336010 . - 0 ID=cds-WP_044756980.1;Parent=gene-LNP58_RS01515;Dbxref=Genbank:WP_044756980.1;Name=WP_044756980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366871.1;locus_tag=LNP58_RS01515;product=efflux RND transporter permease subunit;protein_id=WP_044756980.1;transl_table=11 NZ_CP086372.1 RefSeq gene 336007 337110 . - . ID=gene-LNP58_RS01520;Name=LNP58_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01520;old_locus_tag=LNP58_01520 NZ_CP086372.1 Protein Homology CDS 336007 337110 . - 0 ID=cds-WP_011258341.1;Parent=gene-LNP58_RS01520;Dbxref=Genbank:WP_011258341.1;Name=WP_011258341.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258341.1;locus_tag=LNP58_RS01520;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011258341.1;transl_table=11 NZ_CP086372.1 RefSeq gene 337136 337972 . - . ID=gene-LNP58_RS01525;Name=LNP58_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01525;old_locus_tag=LNP58_01525 NZ_CP086372.1 Protein Homology CDS 337136 337972 . - 0 ID=cds-WP_011258340.1;Parent=gene-LNP58_RS01525;Dbxref=Genbank:WP_011258340.1;Name=WP_011258340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366875.1;locus_tag=LNP58_RS01525;product=MipA/OmpV family protein;protein_id=WP_011258340.1;transl_table=11 NZ_CP086372.1 RefSeq gene 337992 339461 . - . ID=gene-LNP58_RS01530;Name=LNP58_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01530;old_locus_tag=LNP58_01530 NZ_CP086372.1 Protein Homology CDS 337992 339461 . - 0 ID=cds-WP_075242209.1;Parent=gene-LNP58_RS01530;Dbxref=Genbank:WP_075242209.1;Name=WP_075242209.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487588.1;locus_tag=LNP58_RS01530;product=efflux transporter outer membrane subunit;protein_id=WP_075242209.1;transl_table=11 NZ_CP086372.1 RefSeq gene 339567 340256 . + . ID=gene-LNP58_RS01535;Name=LNP58_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01535;old_locus_tag=LNP58_01535 NZ_CP086372.1 Protein Homology CDS 339567 340256 . + 0 ID=cds-WP_011408057.1;Parent=gene-LNP58_RS01535;Dbxref=Genbank:WP_011408057.1;Name=WP_011408057.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408057.1;locus_tag=LNP58_RS01535;product=response regulator;protein_id=WP_011408057.1;transl_table=11 NZ_CP086372.1 RefSeq gene 340253 341446 . + . ID=gene-LNP58_RS01540;Name=LNP58_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01540;old_locus_tag=LNP58_01540 NZ_CP086372.1 Protein Homology CDS 340253 341446 . + 0 ID=cds-WP_011408056.1;Parent=gene-LNP58_RS01540;Dbxref=Genbank:WP_011408056.1;Name=WP_011408056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155809.1;locus_tag=LNP58_RS01540;product=ATP-binding protein;protein_id=WP_011408056.1;transl_table=11 NZ_CP086372.1 RefSeq gene 341505 342770 . - . ID=gene-LNP58_RS01545;Name=LNP58_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01545;old_locus_tag=LNP58_01545 NZ_CP086372.1 Protein Homology CDS 341505 342770 . - 0 ID=cds-WP_011258336.1;Parent=gene-LNP58_RS01545;Dbxref=Genbank:WP_011258336.1;Name=WP_011258336.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487582.1;locus_tag=LNP58_RS01545;product=cation:proton antiporter;protein_id=WP_011258336.1;transl_table=11 NZ_CP086372.1 RefSeq gene 342917 344593 . - . ID=gene-LNP58_RS01550;Name=LNP58_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01550;old_locus_tag=LNP58_01550 NZ_CP086372.1 Protein Homology CDS 342917 344593 . - 0 ID=cds-WP_059317475.1;Parent=gene-LNP58_RS01550;Dbxref=Genbank:WP_059317475.1;Name=WP_059317475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258335.1;locus_tag=LNP58_RS01550;product=serine hydrolase;protein_id=WP_059317475.1;transl_table=11 NZ_CP086372.1 RefSeq gene 344535 345035 . - . ID=gene-LNP58_RS01555;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LNP58_RS01555;old_locus_tag=LNP58_01555 NZ_CP086372.1 Protein Homology CDS 344535 345035 . - 0 ID=cds-WP_059317476.1;Parent=gene-LNP58_RS01555;Dbxref=Genbank:WP_059317476.1;Name=WP_059317476.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172501.1;locus_tag=LNP58_RS01555;product=ribonuclease E activity regulator RraA;protein_id=WP_059317476.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 345608 346441 . + . ID=gene-LNP58_RS01560;Name=LNP58_RS01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01560;old_locus_tag=LNP58_01560;pseudo=true NZ_CP086372.1 Protein Homology CDS 345608 346441 . + 0 ID=cds-LNP58_RS01560;Parent=gene-LNP58_RS01560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155814.1;locus_tag=LNP58_RS01560;product=DUF72 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 346500 346576 . + . ID=gene-LNP58_RS01565;Name=LNP58_RS01565;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS01565;old_locus_tag=LNP58_01565 NZ_CP086372.1 cmsearch ncRNA 346500 346576 . + . ID=rna-LNP58_RS01565;Parent=gene-LNP58_RS01565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01565;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 346500 346576 . + . ID=exon-LNP58_RS01565-1;Parent=rna-LNP58_RS01565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01565;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 346851 347798 . + . ID=gene-LNP58_RS01570;Name=LNP58_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01570;old_locus_tag=LNP58_01570 NZ_CP086372.1 Protein Homology CDS 346851 347798 . + 0 ID=cds-WP_069959788.1;Parent=gene-LNP58_RS01570;Dbxref=Genbank:WP_069959788.1;Name=WP_069959788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304048.1;locus_tag=LNP58_RS01570;product=DMT family transporter;protein_id=WP_069959788.1;transl_table=11 NZ_CP086372.1 RefSeq gene 347986 348708 . - . ID=gene-LNP58_RS01575;Name=LNP58_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01575;old_locus_tag=LNP58_01575 NZ_CP086372.1 Protein Homology CDS 347986 348708 . - 0 ID=cds-WP_059317478.1;Parent=gene-LNP58_RS01575;Dbxref=Genbank:WP_059317478.1;Name=WP_059317478.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573501.1;locus_tag=LNP58_RS01575;product=pseudouridine synthase;protein_id=WP_059317478.1;transl_table=11 NZ_CP086372.1 RefSeq gene 348858 351254 . - . ID=gene-LNP58_RS01580;Name=LNP58_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01580;old_locus_tag=LNP58_01580 NZ_CP086372.1 Protein Homology CDS 348858 351254 . - 0 ID=cds-WP_012444418.1;Parent=gene-LNP58_RS01580;Dbxref=Genbank:WP_012444418.1;Name=WP_012444418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573503.1;locus_tag=LNP58_RS01580;product=EAL domain-containing protein;protein_id=WP_012444418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 351518 353422 . - . ID=gene-LNP58_RS01585;Name=LNP58_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01585;old_locus_tag=LNP58_01585 NZ_CP086372.1 Protein Homology CDS 351518 353422 . - 0 ID=cds-WP_069964510.1;Parent=gene-LNP58_RS01585;Dbxref=Genbank:WP_069964510.1;Name=WP_069964510.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159026.1;locus_tag=LNP58_RS01585;product=DEAD/DEAH box helicase;protein_id=WP_069964510.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 353653 354068 . + . ID=gene-LNP58_RS01590;Name=LNP58_RS01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01590;old_locus_tag=LNP58_01590;pseudo=true NZ_CP086372.1 Protein Homology CDS 353653 354068 . + 0 ID=cds-LNP58_RS01590;Parent=gene-LNP58_RS01590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017914609.1;locus_tag=LNP58_RS01590;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 354098 354750 . + . ID=gene-LNP58_RS01595;Name=LNP58_RS01595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01595;old_locus_tag=LNP58_01595;pseudo=true NZ_CP086372.1 Protein Homology CDS 354098 354750 . + 0 ID=cds-LNP58_RS01595;Parent=gene-LNP58_RS01595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169196.1;locus_tag=LNP58_RS01595;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 354787 355029 . + . ID=gene-LNP58_RS01600;Name=LNP58_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01600;old_locus_tag=LNP58_01600 NZ_CP086372.1 Protein Homology CDS 354787 355029 . + 0 ID=cds-WP_011258326.1;Parent=gene-LNP58_RS01600;Dbxref=Genbank:WP_011258326.1;Name=WP_011258326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919351.1;locus_tag=LNP58_RS01600;product=RNA-binding S4 domain-containing protein;protein_id=WP_011258326.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 355026 355339 . + . ID=gene-LNP58_RS01605;Name=LNP58_RS01605;end_range=355339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01605;old_locus_tag=LNP58_01605;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 355026 355339 . + 0 ID=cds-LNP58_RS01605;Parent=gene-LNP58_RS01605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=355339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169195.1;locus_tag=LNP58_RS01605;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 355378 355779 . - . ID=gene-LNP58_RS01610;Name=LNP58_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01610;old_locus_tag=LNP58_01610 NZ_CP086372.1 Protein Homology CDS 355378 355779 . - 0 ID=cds-WP_014502654.1;Parent=gene-LNP58_RS01610;Dbxref=Genbank:WP_014502654.1;Name=WP_014502654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304051.1;locus_tag=LNP58_RS01610;product=MAPEG family protein;protein_id=WP_014502654.1;transl_table=11 NZ_CP086372.1 RefSeq gene 355805 356338 . - . ID=gene-LNP58_RS01615;Name=LNP58_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01615;old_locus_tag=LNP58_01615 NZ_CP086372.1 Protein Homology CDS 355805 356338 . - 0 ID=cds-WP_075242210.1;Parent=gene-LNP58_RS01615;Dbxref=Genbank:WP_075242210.1;Name=WP_075242210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155824.1;locus_tag=LNP58_RS01615;product=DUF4019 domain-containing protein;protein_id=WP_075242210.1;transl_table=11 NZ_CP086372.1 RefSeq gene 356741 356995 . - . ID=gene-LNP58_RS01620;Name=LNP58_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01620;old_locus_tag=LNP58_01620 NZ_CP086372.1 Protein Homology CDS 356741 356995 . - 0 ID=cds-WP_011258323.1;Parent=gene-LNP58_RS01620;Dbxref=Genbank:WP_011258323.1;Name=WP_011258323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377450.1;locus_tag=LNP58_RS01620;product=hypothetical protein;protein_id=WP_011258323.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 357072 358309 . - . ID=gene-LNP58_RS01625;Name=LNP58_RS01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01625;old_locus_tag=LNP58_01625;pseudo=true NZ_CP086372.1 Protein Homology CDS 357072 358309 . - 0 ID=cds-LNP58_RS01625;Parent=gene-LNP58_RS01625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929315.1;locus_tag=LNP58_RS01625;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 358456 359919 . + . ID=gene-LNP58_RS01630;Name=LNP58_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01630;old_locus_tag=LNP58_01630 NZ_CP086372.1 Protein Homology CDS 358456 359919 . + 0 ID=cds-WP_075242211.1;Parent=gene-LNP58_RS01630;Dbxref=Genbank:WP_075242211.1;Name=WP_075242211.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301296.1;locus_tag=LNP58_RS01630;product=helix-turn-helix domain-containing protein;protein_id=WP_075242211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 359916 360461 . + . ID=gene-LNP58_RS01635;Name=LNP58_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01635;old_locus_tag=LNP58_01635 NZ_CP086372.1 Protein Homology CDS 359916 360461 . + 0 ID=cds-WP_012444410.1;Parent=gene-LNP58_RS01635;Dbxref=Genbank:WP_012444410.1;Name=WP_012444410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348043.1;locus_tag=LNP58_RS01635;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_012444410.1;transl_table=11 NZ_CP086372.1 RefSeq gene 360711 360875 . - . ID=gene-LNP58_RS01640;Name=LNP58_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01640;old_locus_tag=LNP58_01640 NZ_CP086372.1 Protein Homology CDS 360711 360875 . - 0 ID=cds-WP_011258318.1;Parent=gene-LNP58_RS01640;Dbxref=Genbank:WP_011258318.1;Name=WP_011258318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912868.1;locus_tag=LNP58_RS01640;product=hypothetical protein;protein_id=WP_011258318.1;transl_table=11 NZ_CP086372.1 RefSeq gene 360862 362016 . + . ID=gene-LNP58_RS01645;Name=LNP58_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01645;old_locus_tag=LNP58_01645 NZ_CP086372.1 Protein Homology CDS 360862 362016 . + 0 ID=cds-WP_228329706.1;Parent=gene-LNP58_RS01645;Dbxref=Genbank:WP_228329706.1;Name=WP_228329706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444408.1;locus_tag=LNP58_RS01645;product=ectonucleotide pyrophosphatase/phosphodiesterase;protein_id=WP_228329706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 362143 363588 . + . ID=gene-LNP58_RS01650;Name=LNP58_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01650;old_locus_tag=LNP58_01650 NZ_CP086372.1 Protein Homology CDS 362143 363588 . + 0 ID=cds-WP_011258317.1;Parent=gene-LNP58_RS01650;Dbxref=Genbank:WP_011258317.1;Name=WP_011258317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302096.1;locus_tag=LNP58_RS01650;product=chloride channel protein;protein_id=WP_011258317.1;transl_table=11 NZ_CP086372.1 RefSeq gene 363661 364701 . + . ID=gene-LNP58_RS01655;Name=LNP58_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01655;old_locus_tag=LNP58_01655 NZ_CP086372.1 Protein Homology CDS 363661 364701 . + 0 ID=cds-WP_011258316.1;Parent=gene-LNP58_RS01655;Dbxref=Genbank:WP_011258316.1;Name=WP_011258316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377437.1;locus_tag=LNP58_RS01655;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_011258316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 364834 365016 . - . ID=gene-LNP58_RS01660;Name=LNP58_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01660;old_locus_tag=LNP58_01660 NZ_CP086372.1 Protein Homology CDS 364834 365016 . - 0 ID=cds-WP_011408042.1;Parent=gene-LNP58_RS01660;Dbxref=Genbank:WP_011408042.1;Name=WP_011408042.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487537.1;locus_tag=LNP58_RS01660;product=30S ribosomal protein THX;protein_id=WP_011408042.1;transl_table=11 NZ_CP086372.1 RefSeq gene 365316 365726 . - . ID=gene-LNP58_RS01665;Name=LNP58_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01665;old_locus_tag=LNP58_01665 NZ_CP086372.1 Protein Homology CDS 365316 365726 . - 0 ID=cds-WP_011258314.1;Parent=gene-LNP58_RS01665;Dbxref=Genbank:WP_011258314.1;Name=WP_011258314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366931.1;locus_tag=LNP58_RS01665;product=MerC domain-containing protein;protein_id=WP_011258314.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 365927 367964 . + . ID=gene-LNP58_RS01670;Name=LNP58_RS01670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01670;old_locus_tag=LNP58_01670;pseudo=true NZ_CP086372.1 Protein Homology CDS 365927 367964 . + 0 ID=cds-LNP58_RS01670;Parent=gene-LNP58_RS01670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998312.1;locus_tag=LNP58_RS01670;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 368355 370736 . + . ID=gene-LNP58_RS01675;Name=LNP58_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01675;old_locus_tag=LNP58_01675 NZ_CP086372.1 Protein Homology CDS 368355 370736 . + 0 ID=cds-WP_012444404.1;Parent=gene-LNP58_RS01675;Dbxref=Genbank:WP_012444404.1;Name=WP_012444404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348048.1;locus_tag=LNP58_RS01675;product=TonB-dependent receptor;protein_id=WP_012444404.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 370980 371934 . - . ID=gene-LNP58_RS01680;Name=LNP58_RS01680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01680;old_locus_tag=LNP58_01680;pseudo=true NZ_CP086372.1 Protein Homology CDS 370980 371934 . - 0 ID=cds-LNP58_RS01680;Parent=gene-LNP58_RS01680;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS01680;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 371986 372321 . - . ID=gene-LNP58_RS01685;Name=LNP58_RS01685;end_range=372321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01685;old_locus_tag=LNP58_01685;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 371986 372321 . - 0 ID=cds-LNP58_RS01685;Parent=gene-LNP58_RS01685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=372321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483598.1;locus_tag=LNP58_RS01685;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 372495 373220 . - . ID=gene-LNP58_RS01690;Name=LNP58_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01690;old_locus_tag=LNP58_01690 NZ_CP086372.1 Protein Homology CDS 372495 373220 . - 0 ID=cds-WP_011258309.1;Parent=gene-LNP58_RS01690;Dbxref=Genbank:WP_011258309.1;Name=WP_011258309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155745.1;locus_tag=LNP58_RS01690;product=OmpA family protein;protein_id=WP_011258309.1;transl_table=11 NZ_CP086372.1 RefSeq gene 373557 373633 . + . ID=gene-LNP58_RS01695;Name=LNP58_RS01695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS01695;old_locus_tag=LNP58_01695 NZ_CP086372.1 cmsearch ncRNA 373557 373633 . + . ID=rna-LNP58_RS01695;Parent=gene-LNP58_RS01695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01695;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 373557 373633 . + . ID=exon-LNP58_RS01695-1;Parent=rna-LNP58_RS01695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01695;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 373637 375055 . - . ID=gene-LNP58_RS01700;Name=LNP58_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01700;old_locus_tag=LNP58_01700 NZ_CP086372.1 Protein Homology CDS 373637 375055 . - 0 ID=cds-WP_012444398.1;Parent=gene-LNP58_RS01700;Dbxref=Genbank:WP_012444398.1;Name=WP_012444398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113227.1;locus_tag=LNP58_RS01700;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_012444398.1;transl_table=11 NZ_CP086372.1 RefSeq gene 375158 376588 . - . ID=gene-LNP58_RS01705;Name=LNP58_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01705;old_locus_tag=LNP58_01705 NZ_CP086372.1 Protein Homology CDS 375158 376588 . - 0 ID=cds-WP_011408037.1;Parent=gene-LNP58_RS01705;Dbxref=Genbank:WP_011408037.1;Name=WP_011408037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006377195.1;locus_tag=LNP58_RS01705;product=replicative DNA helicase;protein_id=WP_011408037.1;transl_table=11 NZ_CP086372.1 RefSeq gene 376810 377364 . - . ID=gene-LNP58_RS01710;Name=LNP58_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01710;old_locus_tag=LNP58_01710 NZ_CP086372.1 Protein Homology CDS 376810 377364 . - 0 ID=cds-WP_011258306.1;Parent=gene-LNP58_RS01710;Dbxref=Genbank:WP_011258306.1;Name=WP_011258306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972091.1;locus_tag=LNP58_RS01710;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_011258306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 377581 379521 . - . ID=gene-LNP58_RS01715;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LNP58_RS01715;old_locus_tag=LNP58_01715 NZ_CP086372.1 Protein Homology CDS 377581 379521 . - 0 ID=cds-WP_011258305.1;Parent=gene-LNP58_RS01715;Dbxref=Genbank:WP_011258305.1;Name=WP_011258305.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089787.1;locus_tag=LNP58_RS01715;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_011258305.1;transl_table=11 NZ_CP086372.1 RefSeq gene 379697 380335 . - . ID=gene-LNP58_RS01720;Name=LNP58_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01720;old_locus_tag=LNP58_01720 NZ_CP086372.1 Protein Homology CDS 379697 380335 . - 0 ID=cds-WP_027704133.1;Parent=gene-LNP58_RS01720;Dbxref=Genbank:WP_027704133.1;Name=WP_027704133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966694.1;locus_tag=LNP58_RS01720;product=glutathione S-transferase family protein;protein_id=WP_027704133.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 380461 382487 . - . ID=gene-LNP58_RS01725;Name=LNP58_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01725;old_locus_tag=LNP58_01725;pseudo=true NZ_CP086372.1 Protein Homology CDS 380461 382487 . - 0 ID=cds-LNP58_RS01725;Parent=gene-LNP58_RS01725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171542.1;locus_tag=LNP58_RS01725;product=DUF3857 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 382569 383744 . - . ID=gene-LNP58_RS01730;Name=LNP58_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01730;old_locus_tag=LNP58_01730 NZ_CP086372.1 Protein Homology CDS 382569 383744 . - 0 ID=cds-WP_027704134.1;Parent=gene-LNP58_RS01730;Dbxref=Genbank:WP_027704134.1;Name=WP_027704134.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988347.1;locus_tag=LNP58_RS01730;product=acyl-CoA dehydrogenase family protein;protein_id=WP_027704134.1;transl_table=11 NZ_CP086372.1 RefSeq gene 383890 384681 . - . ID=gene-LNP58_RS01735;Name=LNP58_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01735;old_locus_tag=LNP58_01735 NZ_CP086372.1 Protein Homology CDS 383890 384681 . - 0 ID=cds-WP_011408033.1;Parent=gene-LNP58_RS01735;Dbxref=Genbank:WP_011408033.1;Name=WP_011408033.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161798.1;locus_tag=LNP58_RS01735;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011408033.1;transl_table=11 NZ_CP086372.1 RefSeq gene 384827 385042 . + . ID=gene-LNP58_RS01740;Name=LNP58_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01740;old_locus_tag=LNP58_01740 NZ_CP086372.1 Protein Homology CDS 384827 385042 . + 0 ID=cds-WP_011258299.1;Parent=gene-LNP58_RS01740;Dbxref=Genbank:WP_011258299.1;Name=WP_011258299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902710.1;locus_tag=LNP58_RS01740;product=hypothetical protein;protein_id=WP_011258299.1;transl_table=11 NZ_CP086372.1 RefSeq gene 385042 385809 . + . ID=gene-LNP58_RS01745;Name=LNP58_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01745;old_locus_tag=LNP58_01745 NZ_CP086372.1 Protein Homology CDS 385042 385809 . + 0 ID=cds-WP_011408032.1;Parent=gene-LNP58_RS01745;Dbxref=Genbank:WP_011408032.1;Name=WP_011408032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444390.1;locus_tag=LNP58_RS01745;product=TatD family hydrolase;protein_id=WP_011408032.1;transl_table=11 NZ_CP086372.1 RefSeq gene 385871 386701 . - . ID=gene-LNP58_RS01750;Name=LNP58_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01750;old_locus_tag=LNP58_01750 NZ_CP086372.1 Protein Homology CDS 385871 386701 . - 0 ID=cds-WP_011258297.1;Parent=gene-LNP58_RS01750;Dbxref=Genbank:WP_011258297.1;Name=WP_011258297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849525.1;locus_tag=LNP58_RS01750;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_011258297.1;transl_table=11 NZ_CP086372.1 RefSeq gene 386774 387202 . + . ID=gene-LNP58_RS01755;Name=LNP58_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01755;old_locus_tag=LNP58_01755 NZ_CP086372.1 Protein Homology CDS 386774 387202 . + 0 ID=cds-WP_011408031.1;Parent=gene-LNP58_RS01755;Dbxref=Genbank:WP_011408031.1;Name=WP_011408031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966688.1;locus_tag=LNP58_RS01755;product=cytochrome c;protein_id=WP_011408031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 387334 387813 . + . ID=gene-LNP58_RS01760;Name=LNP58_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01760;old_locus_tag=LNP58_01760 NZ_CP086372.1 Protein Homology CDS 387334 387813 . + 0 ID=cds-WP_011408030.1;Parent=gene-LNP58_RS01760;Dbxref=Genbank:WP_011408030.1;Name=WP_011408030.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303254.1;locus_tag=LNP58_RS01760;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011408030.1;transl_table=11 NZ_CP086372.1 RefSeq gene 388064 388279 . - . ID=gene-LNP58_RS01765;Name=LNP58_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01765;old_locus_tag=LNP58_01765 NZ_CP086372.1 Protein Homology CDS 388064 388279 . - 0 ID=cds-WP_011258294.1;Parent=gene-LNP58_RS01765;Dbxref=Genbank:WP_011258294.1;Name=WP_011258294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483561.1;locus_tag=LNP58_RS01765;product=cold-shock protein;protein_id=WP_011258294.1;transl_table=11 NZ_CP086372.1 RefSeq gene 388507 388992 . + . ID=gene-LNP58_RS01770;Name=LNP58_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01770;old_locus_tag=LNP58_01770 NZ_CP086372.1 Protein Homology CDS 388507 388992 . + 0 ID=cds-WP_011258293.1;Parent=gene-LNP58_RS01770;Dbxref=Genbank:WP_011258293.1;Name=WP_011258293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155733.1;locus_tag=LNP58_RS01770;product=DUF456 domain-containing protein;protein_id=WP_011258293.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 389105 389299 . + . ID=gene-LNP58_RS01775;Name=LNP58_RS01775;end_range=389299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01775;old_locus_tag=LNP58_01775;partial=true;pseudo=true;start_range=.,389105 NZ_CP086372.1 Protein Homology CDS 389105 389299 . + 0 ID=cds-LNP58_RS01775;Parent=gene-LNP58_RS01775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=389299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS01775;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,389105;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 389421 390368 . + . ID=gene-LNP58_RS01780;Name=LNP58_RS01780;end_range=390368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01780;old_locus_tag=LNP58_01780;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 389421 390368 . + 0 ID=cds-LNP58_RS01780;Parent=gene-LNP58_RS01780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=390368,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS01780;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 390374 390538 . - . ID=gene-LNP58_RS01785;Name=LNP58_RS01785;end_range=390538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01785;old_locus_tag=LNP58_01785;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 390374 390538 . - 0 ID=cds-LNP58_RS01785;Parent=gene-LNP58_RS01785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=390538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS01785;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 390554 390757 . - . ID=gene-LNP58_RS01790;Name=LNP58_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01790;old_locus_tag=LNP58_01790 NZ_CP086372.1 Protein Homology CDS 390554 390757 . - 0 ID=cds-WP_011258291.1;Parent=gene-LNP58_RS01790;Dbxref=Genbank:WP_011258291.1;Name=WP_011258291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488570.1;locus_tag=LNP58_RS01790;product=hypothetical protein;protein_id=WP_011258291.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 390980 391399 . + . ID=gene-LNP58_RS01795;Name=LNP58_RS01795;end_range=391399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01795;old_locus_tag=LNP58_01795;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 390980 391399 . + 0 ID=cds-LNP58_RS01795;Parent=gene-LNP58_RS01795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=391399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463427.1;locus_tag=LNP58_RS01795;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 391535 391993 . - . ID=gene-LNP58_RS01800;Name=LNP58_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01800;old_locus_tag=LNP58_01800 NZ_CP086372.1 Protein Homology CDS 391535 391993 . - 0 ID=cds-WP_011408025.1;Parent=gene-LNP58_RS01800;Dbxref=Genbank:WP_011408025.1;Name=WP_011408025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157164.1;locus_tag=LNP58_RS01800;product=cupin domain-containing protein;protein_id=WP_011408025.1;transl_table=11 NZ_CP086372.1 RefSeq gene 392135 392211 . + . ID=gene-LNP58_RS01805;Name=LNP58_RS01805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS01805;old_locus_tag=LNP58_01805 NZ_CP086372.1 cmsearch ncRNA 392135 392211 . + . ID=rna-LNP58_RS01805;Parent=gene-LNP58_RS01805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01805;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 392135 392211 . + . ID=exon-LNP58_RS01805-1;Parent=rna-LNP58_RS01805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01805;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 392399 392905 . - . ID=gene-LNP58_RS01810;Name=LNP58_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01810;old_locus_tag=LNP58_01810 NZ_CP086372.1 Protein Homology CDS 392399 392905 . - 0 ID=cds-WP_011408024.1;Parent=gene-LNP58_RS01810;Dbxref=Genbank:WP_011408024.1;Name=WP_011408024.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157169.1;locus_tag=LNP58_RS01810;product=transcriptional repressor;protein_id=WP_011408024.1;transl_table=11 NZ_CP086372.1 RefSeq gene 392919 394322 . - . ID=gene-LNP58_RS01815;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LNP58_RS01815;old_locus_tag=LNP58_01815 NZ_CP086372.1 Protein Homology CDS 392919 394322 . - 0 ID=cds-WP_011258289.1;Parent=gene-LNP58_RS01815;Dbxref=Genbank:WP_011258289.1;Name=WP_011258289.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237481.1;locus_tag=LNP58_RS01815;product=glutamate--tRNA ligase;protein_id=WP_011258289.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 394391 395502 . - . ID=gene-LNP58_RS01820;Name=LNP58_RS01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01820;old_locus_tag=LNP58_01820;pseudo=true NZ_CP086372.1 Protein Homology CDS 394391 395502 . - 0 ID=cds-LNP58_RS01820;Parent=gene-LNP58_RS01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090626.1;locus_tag=LNP58_RS01820;product=DUF3616 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 395524 396240 . - . ID=gene-LNP58_RS01825;Name=LNP58_RS01825;end_range=396240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01825;old_locus_tag=LNP58_01825;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 395524 396240 . - 0 ID=cds-LNP58_RS01825;Parent=gene-LNP58_RS01825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=396240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444381.1;locus_tag=LNP58_RS01825;partial=true;product=nitrilase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 396329 397285 . + . ID=gene-LNP58_RS01830;Name=LNP58_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01830;old_locus_tag=LNP58_01830 NZ_CP086372.1 Protein Homology CDS 396329 397285 . + 0 ID=cds-WP_041181905.1;Parent=gene-LNP58_RS01830;Dbxref=Genbank:WP_041181905.1;Name=WP_041181905.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS01830;product=IS30-like element IS1112a family transposase;protein_id=WP_041181905.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 397290 397466 . - . ID=gene-LNP58_RS01835;Name=LNP58_RS01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01835;old_locus_tag=LNP58_01835;partial=true;pseudo=true;start_range=.,397290 NZ_CP086372.1 Protein Homology CDS 397290 397466 . - 0 ID=cds-LNP58_RS01835;Parent=gene-LNP58_RS01835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444381.1;locus_tag=LNP58_RS01835;partial=true;product=nitrilase;pseudo=true;start_range=.,397290;transl_table=11 NZ_CP086372.1 RefSeq gene 397584 398147 . - . ID=gene-LNP58_RS01840;Name=LNP58_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01840;old_locus_tag=LNP58_01840 NZ_CP086372.1 Protein Homology CDS 397584 398147 . - 0 ID=cds-WP_103073530.1;Parent=gene-LNP58_RS01840;Dbxref=Genbank:WP_103073530.1;Name=WP_103073530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576094.1;locus_tag=LNP58_RS01840;product=GNAT family acetyltransferase;protein_id=WP_103073530.1;transl_table=11 NZ_CP086372.1 RefSeq gene 398402 399214 . + . ID=gene-LNP58_RS01845;Name=LNP58_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01845;old_locus_tag=LNP58_01845 NZ_CP086372.1 Protein Homology CDS 398402 399214 . + 0 ID=cds-WP_011408020.1;Parent=gene-LNP58_RS01845;Dbxref=Genbank:WP_011408020.1;Name=WP_011408020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051873.1;locus_tag=LNP58_RS01845;product=C1 family peptidase;protein_id=WP_011408020.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 399407 400408 . - . ID=gene-LNP58_RS01850;Name=LNP58_RS01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01850;old_locus_tag=LNP58_01850;partial=true;pseudo=true;start_range=.,399407 NZ_CP086372.1 Protein Homology CDS 399407 400408 . - 0 ID=cds-LNP58_RS01850;Parent=gene-LNP58_RS01850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=LNP58_RS01850;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,399407;transl_table=11 NZ_CP086372.1 RefSeq gene 400540 400923 . - . ID=gene-LNP58_RS01855;Name=LNP58_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01855;old_locus_tag=LNP58_01855 NZ_CP086372.1 Protein Homology CDS 400540 400923 . - 0 ID=cds-WP_011408018.1;Parent=gene-LNP58_RS01855;Dbxref=Genbank:WP_011408018.1;Name=WP_011408018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=LNP58_RS01855;product=inner membrane CreD family protein;protein_id=WP_011408018.1;transl_table=11 NZ_CP086372.1 RefSeq gene 401439 402251 . + . ID=gene-LNP58_RS01860;Name=LNP58_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01860;old_locus_tag=LNP58_01860 NZ_CP086372.1 Protein Homology CDS 401439 402251 . + 0 ID=cds-WP_011408017.1;Parent=gene-LNP58_RS01860;Dbxref=Genbank:WP_011408017.1;Name=WP_011408017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157176.1;locus_tag=LNP58_RS01860;product=C1 family peptidase;protein_id=WP_011408017.1;transl_table=11 NZ_CP086372.1 RefSeq gene 402312 403370 . + . ID=gene-LNP58_RS01865;Name=LNP58_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01865;old_locus_tag=LNP58_01865 NZ_CP086372.1 Protein Homology CDS 402312 403370 . + 0 ID=cds-WP_228329705.1;Parent=gene-LNP58_RS01865;Dbxref=Genbank:WP_228329705.1;Name=WP_228329705.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=LNP58_RS01865;product=IS630 family transposase;protein_id=WP_228329705.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 403533 404534 . - . ID=gene-LNP58_RS01870;Name=LNP58_RS01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01870;old_locus_tag=LNP58_01870;partial=true;pseudo=true;start_range=.,403533 NZ_CP086372.1 Protein Homology CDS 403533 404534 . - 0 ID=cds-LNP58_RS01870;Parent=gene-LNP58_RS01870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=LNP58_RS01870;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,403533;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 404503 404603 . - . ID=gene-LNP58_RS01875;Name=LNP58_RS01875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01875;old_locus_tag=LNP58_01875;partial=true;pseudo=true;start_range=.,404503 NZ_CP086372.1 Protein Homology CDS 404503 404603 . - 0 ID=cds-LNP58_RS01875;Parent=gene-LNP58_RS01875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971608.1;locus_tag=LNP58_RS01875;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,404503;transl_table=11 NZ_CP086372.1 RefSeq gene 404702 405085 . - . ID=gene-LNP58_RS01880;Name=LNP58_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01880;old_locus_tag=LNP58_01880 NZ_CP086372.1 Protein Homology CDS 404702 405085 . - 0 ID=cds-WP_011408014.1;Parent=gene-LNP58_RS01880;Dbxref=Genbank:WP_011408014.1;Name=WP_011408014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=LNP58_RS01880;product=inner membrane CreD family protein;protein_id=WP_011408014.1;transl_table=11 NZ_CP086372.1 RefSeq gene 405821 406633 . + . ID=gene-LNP58_RS01885;Name=LNP58_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01885;old_locus_tag=LNP58_01885 NZ_CP086372.1 Protein Homology CDS 405821 406633 . + 0 ID=cds-WP_011258276.1;Parent=gene-LNP58_RS01885;Dbxref=Genbank:WP_011258276.1;Name=WP_011258276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051873.1;locus_tag=LNP58_RS01885;product=C1 family peptidase;protein_id=WP_011258276.1;transl_table=11 NZ_CP086372.1 RefSeq gene 406653 407688 . - . ID=gene-LNP58_RS01890;Name=LNP58_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01890;old_locus_tag=LNP58_01890 NZ_CP086372.1 Protein Homology CDS 407062 407688 . - 0 ID=cds-WP_109181900.1;Parent=gene-LNP58_RS01890;Dbxref=Genbank:WP_109181900.1;Name=WP_109181900.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=LNP58_RS01890;product=IS630 family transposase;protein_id=WP_109181900.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 406653 407060 . - 0 ID=cds-WP_109181900.1;Parent=gene-LNP58_RS01890;Dbxref=Genbank:WP_109181900.1;Name=WP_109181900.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=LNP58_RS01890;product=IS630 family transposase;protein_id=WP_109181900.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 407844 408536 . - . ID=gene-LNP58_RS01895;Name=LNP58_RS01895;end_range=408536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01895;old_locus_tag=LNP58_01895;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 407844 408536 . - 0 ID=cds-LNP58_RS01895;Parent=gene-LNP58_RS01895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=408536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090630.1;locus_tag=LNP58_RS01895;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 408707 409505 . + . ID=gene-LNP58_RS01900;Name=LNP58_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01900;old_locus_tag=LNP58_01900 NZ_CP086372.1 Protein Homology CDS 408707 408978 . + 0 ID=cds-WP_094187763.1;Parent=gene-LNP58_RS01900;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS01900;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 408977 409505 . + 1 ID=cds-WP_094187763.1;Parent=gene-LNP58_RS01900;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS01900;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 409574 409684 . - . ID=gene-LNP58_RS01905;Name=LNP58_RS01905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01905;old_locus_tag=LNP58_01905;partial=true;pseudo=true;start_range=.,409574 NZ_CP086372.1 Protein Homology CDS 409574 409684 . - 0 ID=cds-LNP58_RS01905;Parent=gene-LNP58_RS01905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157179.1;locus_tag=LNP58_RS01905;partial=true;product=two-component system response regulator CreB;pseudo=true;start_range=.,409574;transl_table=11 NZ_CP086372.1 RefSeq gene 409851 410759 . + . ID=gene-LNP58_RS01910;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=LNP58_RS01910;old_locus_tag=LNP58_01910 NZ_CP086372.1 Protein Homology CDS 409851 410759 . + 0 ID=cds-WP_011408011.1;Parent=gene-LNP58_RS01910;Dbxref=Genbank:WP_011408011.1;Name=WP_011408011.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919277.1;locus_tag=LNP58_RS01910;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_011408011.1;transl_table=11 NZ_CP086372.1 RefSeq gene 411171 411713 . + . ID=gene-LNP58_RS01915;Name=LNP58_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01915;old_locus_tag=LNP58_01915 NZ_CP086372.1 Protein Homology CDS 411171 411713 . + 0 ID=cds-WP_011258270.1;Parent=gene-LNP58_RS01915;Dbxref=Genbank:WP_011258270.1;Name=WP_011258270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301140.1;locus_tag=LNP58_RS01915;product=GNAT family N-acetyltransferase;protein_id=WP_011258270.1;transl_table=11 NZ_CP086372.1 RefSeq gene 412116 415580 . + . ID=gene-LNP58_RS01920;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LNP58_RS01920;old_locus_tag=LNP58_01920 NZ_CP086372.1 Protein Homology CDS 412116 415580 . + 0 ID=cds-WP_044756996.1;Parent=gene-LNP58_RS01920;Dbxref=Genbank:WP_044756996.1;Name=WP_044756996.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090633.1;locus_tag=LNP58_RS01920;product=transcription-repair coupling factor;protein_id=WP_044756996.1;transl_table=11 NZ_CP086372.1 RefSeq gene 415812 416030 . - . ID=gene-LNP58_RS01925;Name=LNP58_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01925;old_locus_tag=LNP58_01925 NZ_CP086372.1 GeneMarkS-2+ CDS 415812 416030 . - 0 ID=cds-WP_125168745.1;Parent=gene-LNP58_RS01925;Dbxref=Genbank:WP_125168745.1;Name=WP_125168745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01925;product=hypothetical protein;protein_id=WP_125168745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 416070 416399 . + . ID=gene-LNP58_RS01930;Name=LNP58_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01930;old_locus_tag=LNP58_01930 NZ_CP086372.1 Protein Homology CDS 416070 416399 . + 0 ID=cds-WP_011258268.1;Parent=gene-LNP58_RS01930;Dbxref=Genbank:WP_011258268.1;Name=WP_011258268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905011.1;locus_tag=LNP58_RS01930;product=STAS domain-containing protein;protein_id=WP_011258268.1;transl_table=11 NZ_CP086372.1 RefSeq gene 416418 418415 . + . ID=gene-LNP58_RS01935;Name=LNP58_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01935;old_locus_tag=LNP58_01935 NZ_CP086372.1 Protein Homology CDS 416418 418415 . + 0 ID=cds-WP_011408009.1;Parent=gene-LNP58_RS01935;Dbxref=Genbank:WP_011408009.1;Name=WP_011408009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576106.1;locus_tag=LNP58_RS01935;product=chemotaxis protein CheA;protein_id=WP_011408009.1;transl_table=11 NZ_CP086372.1 RefSeq gene 418483 420639 . + . ID=gene-LNP58_RS01940;Name=LNP58_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01940;old_locus_tag=LNP58_01940 NZ_CP086372.1 Protein Homology CDS 418483 420639 . + 0 ID=cds-WP_069959786.1;Parent=gene-LNP58_RS01940;Dbxref=Genbank:WP_069959786.1;Name=WP_069959786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971660.1;locus_tag=LNP58_RS01940;product=methyl-accepting chemotaxis protein;protein_id=WP_069959786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 420650 421165 . + . ID=gene-LNP58_RS01945;Name=LNP58_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01945;old_locus_tag=LNP58_01945 NZ_CP086372.1 Protein Homology CDS 420650 421165 . + 0 ID=cds-WP_069963839.1;Parent=gene-LNP58_RS01945;Dbxref=Genbank:WP_069963839.1;Name=WP_069963839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502619.1;locus_tag=LNP58_RS01945;product=chemotaxis protein CheW;protein_id=WP_069963839.1;transl_table=11 NZ_CP086372.1 RefSeq gene 421192 422475 . + . ID=gene-LNP58_RS01950;Name=LNP58_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01950;old_locus_tag=LNP58_01950 NZ_CP086372.1 Protein Homology CDS 421192 422475 . + 0 ID=cds-WP_069959785.1;Parent=gene-LNP58_RS01950;Dbxref=Genbank:WP_069959785.1;Name=WP_069959785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375512.1;locus_tag=LNP58_RS01950;product=EAL domain-containing response regulator;protein_id=WP_069959785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 422480 423286 . + . ID=gene-LNP58_RS01955;Name=LNP58_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01955;old_locus_tag=LNP58_01955 NZ_CP086372.1 Protein Homology CDS 422480 423286 . + 0 ID=cds-WP_012444362.1;Parent=gene-LNP58_RS01955;Dbxref=Genbank:WP_012444362.1;Name=WP_012444362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301146.1;locus_tag=LNP58_RS01955;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_012444362.1;transl_table=11 NZ_CP086372.1 RefSeq gene 423283 424422 . + . ID=gene-LNP58_RS01960;Name=LNP58_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01960;old_locus_tag=LNP58_01960 NZ_CP086372.1 Protein Homology CDS 423283 424422 . + 0 ID=cds-WP_178383454.1;Parent=gene-LNP58_RS01960;Dbxref=Genbank:WP_178383454.1;Name=WP_178383454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971662.1;locus_tag=LNP58_RS01960;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_178383454.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 424591 426151 . - . ID=gene-LNP58_RS01965;Name=LNP58_RS01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS01965;old_locus_tag=LNP58_01965;pseudo=true NZ_CP086372.1 Protein Homology CDS 424591 426151 . - 0 ID=cds-LNP58_RS01965;Parent=gene-LNP58_RS01965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051886.1;locus_tag=LNP58_RS01965;product=phospholipase D family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 426370 428427 . - . ID=gene-LNP58_RS01970;Name=LNP58_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01970;old_locus_tag=LNP58_01970 NZ_CP086372.1 Protein Homology CDS 426370 428427 . - 0 ID=cds-WP_011408003.1;Parent=gene-LNP58_RS01970;Dbxref=Genbank:WP_011408003.1;Name=WP_011408003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408003.1;locus_tag=LNP58_RS01970;product=M13 family peptidase;protein_id=WP_011408003.1;transl_table=11 NZ_CP086372.1 RefSeq gene 428760 429014 . - . ID=gene-LNP58_RS01975;Name=LNP58_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01975;old_locus_tag=LNP58_01975 NZ_CP086372.1 Protein Homology CDS 428760 429014 . - 0 ID=cds-WP_228329738.1;Parent=gene-LNP58_RS01975;Dbxref=Genbank:WP_228329738.1;Name=WP_228329738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112229.1;locus_tag=LNP58_RS01975;product=hypothetical protein;protein_id=WP_228329738.1;transl_table=11 NZ_CP086372.1 RefSeq gene 429102 429177 . + . ID=gene-LNP58_RS01980;Name=LNP58_RS01980;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS01980;old_locus_tag=LNP58_01980 NZ_CP086372.1 cmsearch ncRNA 429102 429177 . + . ID=rna-LNP58_RS01980;Parent=gene-LNP58_RS01980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01980;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 429102 429177 . + . ID=exon-LNP58_RS01980-1;Parent=rna-LNP58_RS01980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS01980;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 429372 430121 . - . ID=gene-LNP58_RS01985;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LNP58_RS01985;old_locus_tag=LNP58_01985 NZ_CP086372.1 Protein Homology CDS 429372 430121 . - 0 ID=cds-WP_011258259.1;Parent=gene-LNP58_RS01985;Dbxref=Genbank:WP_011258259.1;Name=WP_011258259.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167506.1;locus_tag=LNP58_RS01985;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_011258259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 430225 430938 . + . ID=gene-LNP58_RS01990;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LNP58_RS01990;old_locus_tag=LNP58_01990 NZ_CP086372.1 Protein Homology CDS 430225 430938 . + 0 ID=cds-WP_012444354.1;Parent=gene-LNP58_RS01990;Dbxref=Genbank:WP_012444354.1;Name=WP_012444354.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444354.1;locus_tag=LNP58_RS01990;product=deoxyribonuclease V;protein_id=WP_012444354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 431010 431528 . + . ID=gene-LNP58_RS01995;Name=LNP58_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS01995;old_locus_tag=LNP58_01995 NZ_CP086372.1 GeneMarkS-2+ CDS 431010 431528 . + 0 ID=cds-WP_125168744.1;Parent=gene-LNP58_RS01995;Dbxref=Genbank:WP_125168744.1;Name=WP_125168744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS01995;product=hypothetical protein;protein_id=WP_125168744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 431706 432596 . + . ID=gene-LNP58_RS02000;Name=LNP58_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02000;old_locus_tag=LNP58_02000 NZ_CP086372.1 Protein Homology CDS 431706 432596 . + 0 ID=cds-WP_075242347.1;Parent=gene-LNP58_RS02000;Dbxref=Genbank:WP_075242347.1;Name=WP_075242347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375490.1;locus_tag=LNP58_RS02000;product=pirin family protein;protein_id=WP_075242347.1;transl_table=11 NZ_CP086372.1 RefSeq gene 432843 433304 . + . ID=gene-LNP58_RS02005;Name=LNP58_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02005;old_locus_tag=LNP58_02005 NZ_CP086372.1 Protein Homology CDS 432843 433304 . + 0 ID=cds-WP_011407999.1;Parent=gene-LNP58_RS02005;Dbxref=Genbank:WP_011407999.1;Name=WP_011407999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488124.1;locus_tag=LNP58_RS02005;product=hypothetical protein;protein_id=WP_011407999.1;transl_table=11 NZ_CP086372.1 RefSeq gene 433649 436057 . - . ID=gene-LNP58_RS02010;Name=LNP58_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02010;old_locus_tag=LNP58_02010 NZ_CP086372.1 Protein Homology CDS 433649 436057 . - 0 ID=cds-WP_069959784.1;Parent=gene-LNP58_RS02010;Dbxref=Genbank:WP_069959784.1;Name=WP_069959784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502594.1;locus_tag=LNP58_RS02010;product=DUF2235 domain-containing protein;protein_id=WP_069959784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 436054 436638 . - . ID=gene-LNP58_RS02015;Name=LNP58_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02015;old_locus_tag=LNP58_02015 NZ_CP086372.1 Protein Homology CDS 436054 436638 . - 0 ID=cds-WP_011407996.1;Parent=gene-LNP58_RS02015;Dbxref=Genbank:WP_011407996.1;Name=WP_011407996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444350.1;locus_tag=LNP58_RS02015;product=DUF3304 domain-containing protein;protein_id=WP_011407996.1;transl_table=11 NZ_CP086372.1 RefSeq gene 436692 436844 . - . ID=gene-LNP58_RS02020;Name=LNP58_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02020;old_locus_tag=LNP58_02020 NZ_CP086372.1 Protein Homology CDS 436692 436844 . - 0 ID=cds-WP_154583424.1;Parent=gene-LNP58_RS02020;Dbxref=Genbank:WP_154583424.1;Name=WP_154583424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444346.1;locus_tag=LNP58_RS02020;product=hypothetical protein;protein_id=WP_154583424.1;transl_table=11 NZ_CP086372.1 RefSeq gene 436841 437428 . - . ID=gene-LNP58_RS02025;Name=LNP58_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02025;old_locus_tag=LNP58_02025 NZ_CP086372.1 Protein Homology CDS 436841 437428 . - 0 ID=cds-WP_011407995.1;Parent=gene-LNP58_RS02025;Dbxref=Genbank:WP_011407995.1;Name=WP_011407995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444350.1;locus_tag=LNP58_RS02025;product=DUF3304 domain-containing protein;protein_id=WP_011407995.1;transl_table=11 NZ_CP086372.1 RefSeq gene 437482 437634 . - . ID=gene-LNP58_RS02030;Name=LNP58_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02030;old_locus_tag=LNP58_02030 NZ_CP086372.1 Protein Homology CDS 437482 437634 . - 0 ID=cds-WP_012444346.1;Parent=gene-LNP58_RS02030;Dbxref=Genbank:WP_012444346.1;Name=WP_012444346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444346.1;locus_tag=LNP58_RS02030;product=hypothetical protein;protein_id=WP_012444346.1;transl_table=11 NZ_CP086372.1 RefSeq gene 437631 438197 . - . ID=gene-LNP58_RS02035;Name=LNP58_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02035;old_locus_tag=LNP58_02035 NZ_CP086372.1 Protein Homology CDS 437631 438197 . - 0 ID=cds-WP_011407994.1;Parent=gene-LNP58_RS02035;Dbxref=Genbank:WP_011407994.1;Name=WP_011407994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502591.1;locus_tag=LNP58_RS02035;product=DUF3304 domain-containing protein;protein_id=WP_011407994.1;transl_table=11 NZ_CP086372.1 RefSeq gene 438269 438421 . - . ID=gene-LNP58_RS02040;Name=LNP58_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02040;old_locus_tag=LNP58_02040 NZ_CP086372.1 Protein Homology CDS 438269 438421 . - 0 ID=cds-WP_011258252.1;Parent=gene-LNP58_RS02040;Dbxref=Genbank:WP_011258252.1;Name=WP_011258252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444346.1;locus_tag=LNP58_RS02040;product=hypothetical protein;protein_id=WP_011258252.1;transl_table=11 NZ_CP086372.1 RefSeq gene 438418 438651 . - . ID=gene-LNP58_RS02045;Name=LNP58_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02045;old_locus_tag=LNP58_02045 NZ_CP086372.1 Protein Homology CDS 438418 438651 . - 0 ID=cds-WP_011258251.1;Parent=gene-LNP58_RS02045;Dbxref=Genbank:WP_011258251.1;Name=WP_011258251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502589.1;locus_tag=LNP58_RS02045;product=DUF3304 domain-containing protein;protein_id=WP_011258251.1;transl_table=11 NZ_CP086372.1 RefSeq gene 439326 440294 . - . ID=gene-LNP58_RS02050;Name=LNP58_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02050;old_locus_tag=LNP58_02050 NZ_CP086372.1 Protein Homology CDS 439326 440294 . - 0 ID=cds-WP_011258803.1-3;Parent=gene-LNP58_RS02050;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS02050;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 440305 440853 . - . ID=gene-LNP58_RS02055;Name=LNP58_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02055;old_locus_tag=LNP58_02055 NZ_CP086372.1 GeneMarkS-2+ CDS 440305 440853 . - 0 ID=cds-WP_181689598.1;Parent=gene-LNP58_RS02055;Dbxref=Genbank:WP_181689598.1;Name=WP_181689598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS02055;product=hypothetical protein;protein_id=WP_181689598.1;transl_table=11 NZ_CP086372.1 RefSeq gene 440922 441830 . - . ID=gene-LNP58_RS02060;Name=LNP58_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02060;old_locus_tag=LNP58_02060 NZ_CP086372.1 Protein Homology CDS 440922 441830 . - 0 ID=cds-WP_011407982.1;Parent=gene-LNP58_RS02060;Dbxref=Genbank:WP_011407982.1;Name=WP_011407982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=LNP58_RS02060;product=DUF4123 domain-containing protein;protein_id=WP_011407982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 441837 443699 . - . ID=gene-LNP58_RS02065;Name=LNP58_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02065;old_locus_tag=LNP58_02065 NZ_CP086372.1 Protein Homology CDS 441837 443699 . - 0 ID=cds-WP_228329704.1;Parent=gene-LNP58_RS02065;Dbxref=Genbank:WP_228329704.1;Name=WP_228329704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258250.1;locus_tag=LNP58_RS02065;product=type VI secretion system Vgr family protein;protein_id=WP_228329704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 443760 445868 . - . ID=gene-LNP58_RS02070;Name=LNP58_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02070;old_locus_tag=LNP58_02070 NZ_CP086372.1 Protein Homology CDS 443760 445868 . - 0 ID=cds-WP_075242346.1;Parent=gene-LNP58_RS02070;Dbxref=Genbank:WP_075242346.1;Name=WP_075242346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407990.1;locus_tag=LNP58_RS02070;product=DUF2235 domain-containing protein;protein_id=WP_075242346.1;transl_table=11 NZ_CP086372.1 RefSeq gene 445918 446589 . - . ID=gene-LNP58_RS02075;Name=LNP58_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02075;old_locus_tag=LNP58_02075 NZ_CP086372.1 Protein Homology CDS 445918 446589 . - 0 ID=cds-WP_011407989.1;Parent=gene-LNP58_RS02075;Dbxref=Genbank:WP_011407989.1;Name=WP_011407989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502585.1;locus_tag=LNP58_RS02075;product=DUF3304 domain-containing protein;protein_id=WP_011407989.1;transl_table=11 NZ_CP086372.1 RefSeq gene 446870 447532 . - . ID=gene-LNP58_RS02080;Name=LNP58_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02080;old_locus_tag=LNP58_02080 NZ_CP086372.1 Protein Homology CDS 446870 447532 . - 0 ID=cds-WP_228329702.1;Parent=gene-LNP58_RS02080;Dbxref=Genbank:WP_228329702.1;Name=WP_228329702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407989.1;locus_tag=LNP58_RS02080;product=DUF3304 domain-containing protein;protein_id=WP_228329702.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 447813 448326 . - . ID=gene-LNP58_RS02085;Name=LNP58_RS02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02085;old_locus_tag=LNP58_02085;pseudo=true NZ_CP086372.1 Protein Homology CDS 447813 448326 . - 0 ID=cds-LNP58_RS02085;Parent=gene-LNP58_RS02085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502584.1;locus_tag=LNP58_RS02085;product=DUF3304 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 448412 449305 . - . ID=gene-LNP58_RS02090;Name=LNP58_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02090;old_locus_tag=LNP58_02090 NZ_CP086372.1 Protein Homology CDS 448412 449305 . - 0 ID=cds-WP_228329701.1;Parent=gene-LNP58_RS02090;Dbxref=Genbank:WP_228329701.1;Name=WP_228329701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258248.1;locus_tag=LNP58_RS02090;product=DUF4123 domain-containing protein;protein_id=WP_228329701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 449440 450408 . - . ID=gene-LNP58_RS02095;Name=LNP58_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02095;old_locus_tag=LNP58_02095 NZ_CP086372.1 Protein Homology CDS 449440 450408 . - 0 ID=cds-WP_011258802.1-3;Parent=gene-LNP58_RS02095;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS02095;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 450516 452939 . - . ID=gene-LNP58_RS02100;Name=LNP58_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02100;old_locus_tag=LNP58_02100 NZ_CP086372.1 Protein Homology CDS 450516 452939 . - 0 ID=cds-WP_044757009.1;Parent=gene-LNP58_RS02100;Dbxref=Genbank:WP_044757009.1;Name=WP_044757009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407986.1;locus_tag=LNP58_RS02100;product=type VI secretion system Vgr family protein;protein_id=WP_044757009.1;transl_table=11 NZ_CP086372.1 RefSeq gene 452949 454367 . - . ID=gene-LNP58_RS02105;Name=LNP58_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02105;old_locus_tag=LNP58_02105 NZ_CP086372.1 Protein Homology CDS 452949 454367 . - 0 ID=cds-WP_228329700.1;Parent=gene-LNP58_RS02105;Dbxref=Genbank:WP_228329700.1;Name=WP_228329700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502397.1;locus_tag=LNP58_RS02105;product=DUF2235 domain-containing protein;protein_id=WP_228329700.1;transl_table=11 NZ_CP086372.1 RefSeq gene 454351 454929 . - . ID=gene-LNP58_RS02110;Name=LNP58_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02110;old_locus_tag=LNP58_02110 NZ_CP086372.1 GeneMarkS-2+ CDS 454351 454929 . - 0 ID=cds-WP_075241467.1;Parent=gene-LNP58_RS02110;Dbxref=Genbank:WP_075241467.1;Name=WP_075241467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS02110;product=DUF3304 domain-containing protein;protein_id=WP_075241467.1;transl_table=11 NZ_CP086372.1 RefSeq gene 454998 455906 . - . ID=gene-LNP58_RS02115;Name=LNP58_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02115;old_locus_tag=LNP58_02115 NZ_CP086372.1 Protein Homology CDS 454998 455906 . - 0 ID=cds-WP_011407982.1-2;Parent=gene-LNP58_RS02115;Dbxref=Genbank:WP_011407982.1;Name=WP_011407982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=LNP58_RS02115;product=DUF4123 domain-containing protein;protein_id=WP_011407982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 455913 458735 . - . ID=gene-LNP58_RS02120;Name=LNP58_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02120;old_locus_tag=LNP58_02120 NZ_CP086372.1 Protein Homology CDS 455913 458735 . - 0 ID=cds-WP_069965089.1;Parent=gene-LNP58_RS02120;Dbxref=Genbank:WP_069965089.1;Name=WP_069965089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407981.1;locus_tag=LNP58_RS02120;product=type VI secretion system Vgr family protein;protein_id=WP_069965089.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 458862 459317 . - . ID=gene-LNP58_RS02125;Name=LNP58_RS02125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02125;old_locus_tag=LNP58_02125;partial=true;pseudo=true;start_range=.,458862 NZ_CP086372.1 Protein Homology CDS 458862 459317 . - 0 ID=cds-LNP58_RS02125;Parent=gene-LNP58_RS02125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157198.1;locus_tag=LNP58_RS02125;partial=true;product=OsmC family protein;pseudo=true;start_range=.,458862;transl_table=11 NZ_CP086372.1 RefSeq gene 459351 460208 . - . ID=gene-LNP58_RS02130;Name=LNP58_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02130;old_locus_tag=LNP58_02130 NZ_CP086372.1 Protein Homology CDS 459351 460208 . - 0 ID=cds-WP_075242260.1;Parent=gene-LNP58_RS02130;Dbxref=Genbank:WP_075242260.1;Name=WP_075242260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157199.1;locus_tag=LNP58_RS02130;product=pirin family protein;protein_id=WP_075242260.1;transl_table=11 NZ_CP086372.1 RefSeq gene 460440 462512 . + . ID=gene-LNP58_RS02135;Name=LNP58_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02135;old_locus_tag=LNP58_02135 NZ_CP086372.1 Protein Homology CDS 460440 462512 . + 0 ID=cds-WP_011407979.1;Parent=gene-LNP58_RS02135;Dbxref=Genbank:WP_011407979.1;Name=WP_011407979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802008.1;locus_tag=LNP58_RS02135;product=carbon starvation protein A;protein_id=WP_011407979.1;transl_table=11 NZ_CP086372.1 RefSeq gene 462512 462736 . + . ID=gene-LNP58_RS02140;Name=LNP58_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02140;old_locus_tag=LNP58_02140 NZ_CP086372.1 Protein Homology CDS 462512 462736 . + 0 ID=cds-WP_005926176.1;Parent=gene-LNP58_RS02140;Dbxref=Genbank:WP_005926176.1;Name=WP_005926176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508400.1;locus_tag=LNP58_RS02140;product=CstA-like transporter-associated (seleno)protein;protein_id=WP_005926176.1;transl_table=11 NZ_CP086372.1 RefSeq gene 463147 463223 . + . ID=gene-LNP58_RS02145;Name=LNP58_RS02145;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02145;old_locus_tag=LNP58_02145 NZ_CP086372.1 cmsearch ncRNA 463147 463223 . + . ID=rna-LNP58_RS02145;Parent=gene-LNP58_RS02145;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02145;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 463147 463223 . + . ID=exon-LNP58_RS02145-1;Parent=rna-LNP58_RS02145;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02145;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 463274 463978 . - . ID=gene-LNP58_RS02150;Name=LNP58_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02150;old_locus_tag=LNP58_02150 NZ_CP086372.1 Protein Homology CDS 463274 463978 . - 0 ID=cds-WP_044757492.1;Parent=gene-LNP58_RS02150;Dbxref=Genbank:WP_044757492.1;Name=WP_044757492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174244.1;locus_tag=LNP58_RS02150;product=HAD family hydrolase;protein_id=WP_044757492.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 464186 464323 . + . ID=gene-LNP58_RS02155;Name=LNP58_RS02155;end_range=464323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02155;old_locus_tag=LNP58_02155;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 464186 464323 . + 0 ID=cds-LNP58_RS02155;Parent=gene-LNP58_RS02155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=464323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112231.1;locus_tag=LNP58_RS02155;partial=true;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 464330 465295 . - . ID=gene-LNP58_RS02160;Name=LNP58_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02160;old_locus_tag=LNP58_02160 NZ_CP086372.1 Protein Homology CDS 464330 465295 . - 0 ID=cds-WP_115801880.1;Parent=gene-LNP58_RS02160;Dbxref=Genbank:WP_115801880.1;Name=WP_115801880.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS02160;product=IS1595-like element ISXo5 family transposase;protein_id=WP_115801880.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 465385 466443 . - . ID=gene-LNP58_RS02165;Name=LNP58_RS02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02165;old_locus_tag=LNP58_02165;partial=true;pseudo=true;start_range=.,465385 NZ_CP086372.1 Protein Homology CDS 465385 466443 . - 0 ID=cds-LNP58_RS02165;Parent=gene-LNP58_RS02165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS02165;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,465385;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 466514 467511 . - . ID=gene-LNP58_RS02170;Name=LNP58_RS02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02170;old_locus_tag=LNP58_02170;pseudo=true NZ_CP086372.1 Protein Homology CDS 466514 467511 . - 0 ID=cds-LNP58_RS02170;Parent=gene-LNP58_RS02170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166271.1;locus_tag=LNP58_RS02170;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 467742 469289 . + . ID=gene-LNP58_RS02175;Name=LNP58_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02175;old_locus_tag=LNP58_02175 NZ_CP086372.1 Protein Homology CDS 467742 469289 . + 0 ID=cds-WP_173340381.1;Parent=gene-LNP58_RS02175;Dbxref=Genbank:WP_173340381.1;Name=WP_173340381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157213.1;locus_tag=LNP58_RS02175;product=sensor domain-containing diguanylate cyclase;protein_id=WP_173340381.1;transl_table=11 NZ_CP086372.1 RefSeq gene 469572 470108 . - . ID=gene-LNP58_RS02180;Name=LNP58_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02180;old_locus_tag=LNP58_02180 NZ_CP086372.1 Protein Homology CDS 469572 470108 . - 0 ID=cds-WP_011258239.1;Parent=gene-LNP58_RS02180;Dbxref=Genbank:WP_011258239.1;Name=WP_011258239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157214.1;locus_tag=LNP58_RS02180;product=single-stranded DNA-binding protein;protein_id=WP_011258239.1;transl_table=11 NZ_CP086372.1 RefSeq gene 470384 471382 . + . ID=gene-LNP58_RS02185;Name=LNP58_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02185;old_locus_tag=LNP58_02185 NZ_CP086372.1 Protein Homology CDS 470384 471382 . + 0 ID=cds-WP_011258238.1;Parent=gene-LNP58_RS02185;Dbxref=Genbank:WP_011258238.1;Name=WP_011258238.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966188.1;locus_tag=LNP58_RS02185;product=polyprenyl synthetase family protein;protein_id=WP_011258238.1;transl_table=11 NZ_CP086372.1 RefSeq gene 471567 472361 . - . ID=gene-LNP58_RS02190;Name=LNP58_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02190;old_locus_tag=LNP58_02190 NZ_CP086372.1 Protein Homology CDS 471567 472361 . - 0 ID=cds-WP_011258237.1;Parent=gene-LNP58_RS02190;Dbxref=Genbank:WP_011258237.1;Name=WP_011258237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502557.1;locus_tag=LNP58_RS02190;product=dienelactone hydrolase family protein;protein_id=WP_011258237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 472678 474084 . - . ID=gene-LNP58_RS02195;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LNP58_RS02195;old_locus_tag=LNP58_02195 NZ_CP086372.1 Protein Homology CDS 472678 474084 . - 0 ID=cds-WP_011258236.1;Parent=gene-LNP58_RS02195;Dbxref=Genbank:WP_011258236.1;Name=WP_011258236.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157217.1;locus_tag=LNP58_RS02195;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_011258236.1;transl_table=11 NZ_CP086372.1 RefSeq gene 474065 475420 . - . ID=gene-LNP58_RS02200;Name=murL;gbkey=Gene;gene=murL;gene_biotype=protein_coding;locus_tag=LNP58_RS02200;old_locus_tag=LNP58_02200 NZ_CP086372.1 Protein Homology CDS 474065 475420 . - 0 ID=cds-WP_011258235.1;Parent=gene-LNP58_RS02200;Dbxref=Genbank:WP_011258235.1;Name=WP_011258235.1;Ontology_term=GO:0009252,GO:0016855;gbkey=CDS;gene=murL;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258235.1;locus_tag=LNP58_RS02200;product=UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;protein_id=WP_011258235.1;transl_table=11 NZ_CP086372.1 RefSeq gene 475417 475875 . - . ID=gene-LNP58_RS02205;Name=LNP58_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02205;old_locus_tag=LNP58_02205 NZ_CP086372.1 Protein Homology CDS 475417 475875 . - 0 ID=cds-WP_011407974.1;Parent=gene-LNP58_RS02205;Dbxref=Genbank:WP_011407974.1;Name=WP_011407974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502553.1;locus_tag=LNP58_RS02205;product=hypothetical protein;protein_id=WP_011407974.1;transl_table=11 NZ_CP086372.1 RefSeq gene 475859 478468 . - . ID=gene-LNP58_RS02210;Name=LNP58_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02210;old_locus_tag=LNP58_02210 NZ_CP086372.1 Protein Homology CDS 475859 478468 . - 0 ID=cds-WP_011407973.1;Parent=gene-LNP58_RS02210;Dbxref=Genbank:WP_011407973.1;Name=WP_011407973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090660.1;locus_tag=LNP58_RS02210;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=WP_011407973.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 478651 479534 . + . ID=gene-LNP58_RS02215;Name=LNP58_RS02215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02215;old_locus_tag=LNP58_02215;pseudo=true NZ_CP086372.1 Protein Homology CDS 478651 479534 . + 0 ID=cds-LNP58_RS02215;Parent=gene-LNP58_RS02215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375445.1;locus_tag=LNP58_RS02215;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 479566 480447 . + . ID=gene-LNP58_RS02220;Name=LNP58_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02220;old_locus_tag=LNP58_02220 NZ_CP086372.1 Protein Homology CDS 479566 480447 . + 0 ID=cds-WP_011407971.1;Parent=gene-LNP58_RS02220;Dbxref=Genbank:WP_011407971.1;Name=WP_011407971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369373.1;locus_tag=LNP58_RS02220;product=PhzF family phenazine biosynthesis protein;protein_id=WP_011407971.1;transl_table=11 NZ_CP086372.1 RefSeq gene 480733 481332 . - . ID=gene-LNP58_RS02225;Name=LNP58_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02225;old_locus_tag=LNP58_02225 NZ_CP086372.1 Protein Homology CDS 480733 481332 . - 0 ID=cds-WP_027703692.1;Parent=gene-LNP58_RS02225;Dbxref=Genbank:WP_027703692.1;Name=WP_027703692.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157223.1;locus_tag=LNP58_RS02225;product=glycine zipper 2TM domain-containing protein;protein_id=WP_027703692.1;transl_table=11 NZ_CP086372.1 RefSeq gene 481485 481919 . - . ID=gene-LNP58_RS02230;Name=LNP58_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02230;old_locus_tag=LNP58_02230 NZ_CP086372.1 Protein Homology CDS 481485 481919 . - 0 ID=cds-WP_011258228.1;Parent=gene-LNP58_RS02230;Dbxref=Genbank:WP_011258228.1;Name=WP_011258228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159920.1;locus_tag=LNP58_RS02230;product=OsmC family protein;protein_id=WP_011258228.1;transl_table=11 NZ_CP086372.1 RefSeq gene 482231 482306 . - . ID=gene-LNP58_RS02235;Name=LNP58_RS02235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02235;old_locus_tag=LNP58_02235 NZ_CP086372.1 cmsearch ncRNA 482231 482306 . - . ID=rna-LNP58_RS02235;Parent=gene-LNP58_RS02235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02235;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 482231 482306 . - . ID=exon-LNP58_RS02235-1;Parent=rna-LNP58_RS02235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02235;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 482366 483313 . - . ID=gene-LNP58_RS02240;Name=LNP58_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02240;old_locus_tag=LNP58_02240 NZ_CP086372.1 Protein Homology CDS 482366 483313 . - 0 ID=cds-WP_011258227.1;Parent=gene-LNP58_RS02240;Dbxref=Genbank:WP_011258227.1;Name=WP_011258227.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913284.1;locus_tag=LNP58_RS02240;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_011258227.1;transl_table=11 NZ_CP086372.1 RefSeq gene 483327 483794 . - . ID=gene-LNP58_RS02245;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LNP58_RS02245;old_locus_tag=LNP58_02245 NZ_CP086372.1 Protein Homology CDS 483327 483794 . - 0 ID=cds-WP_011407969.1;Parent=gene-LNP58_RS02245;Dbxref=Genbank:WP_011407969.1;Name=WP_011407969.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302529.1;locus_tag=LNP58_RS02245;product=Holliday junction resolvase RuvX;protein_id=WP_011407969.1;transl_table=11 NZ_CP086372.1 RefSeq gene 483787 484353 . - . ID=gene-LNP58_RS02250;Name=LNP58_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02250;old_locus_tag=LNP58_02250 NZ_CP086372.1 Protein Homology CDS 483787 484353 . - 0 ID=cds-WP_011258225.1;Parent=gene-LNP58_RS02250;Dbxref=Genbank:WP_011258225.1;Name=WP_011258225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802054.1;locus_tag=LNP58_RS02250;product=YqgE/AlgH family protein;protein_id=WP_011258225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 484429 485625 . + . ID=gene-LNP58_RS02255;Name=LNP58_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02255;old_locus_tag=LNP58_02255 NZ_CP086372.1 GeneMarkS-2+ CDS 484429 485625 . + 0 ID=cds-WP_228329699.1;Parent=gene-LNP58_RS02255;Dbxref=Genbank:WP_228329699.1;Name=WP_228329699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS02255;product=hypothetical protein;protein_id=WP_228329699.1;transl_table=11 NZ_CP086372.1 RefSeq gene 485622 486194 . + . ID=gene-LNP58_RS02260;Name=LNP58_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02260;old_locus_tag=LNP58_02260 NZ_CP086372.1 Protein Homology CDS 485622 486194 . + 0 ID=cds-WP_011407966.1;Parent=gene-LNP58_RS02260;Dbxref=Genbank:WP_011407966.1;Name=WP_011407966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502539.1;locus_tag=LNP58_RS02260;product=DNA-3-methyladenine glycosylase I;protein_id=WP_011407966.1;transl_table=11 NZ_CP086372.1 RefSeq gene 486300 486590 . + . ID=gene-LNP58_RS02265;Name=LNP58_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02265;old_locus_tag=LNP58_02265 NZ_CP086372.1 Protein Homology CDS 486300 486590 . + 0 ID=cds-WP_228329737.1;Parent=gene-LNP58_RS02265;Dbxref=Genbank:WP_228329737.1;Name=WP_228329737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014017.2;locus_tag=LNP58_RS02265;product=DUF72 domain-containing protein;protein_id=WP_228329737.1;transl_table=11 NZ_CP086372.1 RefSeq gene 486713 486788 . + . ID=gene-LNP58_RS02270;Name=LNP58_RS02270;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02270;old_locus_tag=LNP58_02270 NZ_CP086372.1 cmsearch ncRNA 486713 486788 . + . ID=rna-LNP58_RS02270;Parent=gene-LNP58_RS02270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02270;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 486713 486788 . + . ID=exon-LNP58_RS02270-1;Parent=rna-LNP58_RS02270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02270;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 486818 487492 . - . ID=gene-LNP58_RS02275;Name=LNP58_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02275;old_locus_tag=LNP58_02275 NZ_CP086372.1 Protein Homology CDS 486818 487492 . - 0 ID=cds-WP_027703695.1;Parent=gene-LNP58_RS02275;Dbxref=Genbank:WP_027703695.1;Name=WP_027703695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851096.1;locus_tag=LNP58_RS02275;product=YitT family protein;protein_id=WP_027703695.1;transl_table=11 NZ_CP086372.1 RefSeq gene 487764 488894 . - . ID=gene-LNP58_RS02280;Name=LNP58_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02280;old_locus_tag=LNP58_02280 NZ_CP086372.1 Protein Homology CDS 487764 488894 . - 0 ID=cds-WP_011407963.1;Parent=gene-LNP58_RS02280;Dbxref=Genbank:WP_011407963.1;Name=WP_011407963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489921.1;locus_tag=LNP58_RS02280;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_011407963.1;transl_table=11 NZ_CP086372.1 RefSeq gene 489008 490045 . - . ID=gene-LNP58_RS02285;Name=LNP58_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02285;old_locus_tag=LNP58_02285 NZ_CP086372.1 Protein Homology CDS 489008 490045 . - 0 ID=cds-WP_011258220.1;Parent=gene-LNP58_RS02285;Dbxref=Genbank:WP_011258220.1;Name=WP_011258220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185385.1;locus_tag=LNP58_RS02285;product=type IV pilus twitching motility protein PilT;protein_id=WP_011258220.1;transl_table=11 NZ_CP086372.1 RefSeq gene 490409 491101 . + . ID=gene-LNP58_RS02290;Name=LNP58_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02290;old_locus_tag=LNP58_02290 NZ_CP086372.1 Protein Homology CDS 490409 491101 . + 0 ID=cds-WP_011407962.1;Parent=gene-LNP58_RS02290;Dbxref=Genbank:WP_011407962.1;Name=WP_011407962.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157671.1;locus_tag=LNP58_RS02290;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_011407962.1;transl_table=11 NZ_CP086372.1 RefSeq gene 491145 492005 . + . ID=gene-LNP58_RS02295;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LNP58_RS02295;old_locus_tag=LNP58_02295 NZ_CP086372.1 Protein Homology CDS 491145 492005 . + 0 ID=cds-WP_011407961.1;Parent=gene-LNP58_RS02295;Dbxref=Genbank:WP_011407961.1;Name=WP_011407961.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348110.1;locus_tag=LNP58_RS02295;product=pyrroline-5-carboxylate reductase;protein_id=WP_011407961.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 492076 493395 . + . ID=gene-LNP58_RS02300;Name=LNP58_RS02300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02300;old_locus_tag=LNP58_02300;pseudo=true NZ_CP086372.1 Protein Homology CDS 492076 493395 . + 0 ID=cds-LNP58_RS02300;Parent=gene-LNP58_RS02300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS02300;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 494040 494465 . + . ID=gene-LNP58_RS02305;Name=LNP58_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02305;old_locus_tag=LNP58_02305 NZ_CP086372.1 Protein Homology CDS 494040 494465 . + 0 ID=cds-WP_011258216.1;Parent=gene-LNP58_RS02305;Dbxref=Genbank:WP_011258216.1;Name=WP_011258216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502532.1;locus_tag=LNP58_RS02305;product=HU family DNA-binding protein;protein_id=WP_011258216.1;transl_table=11 NZ_CP086372.1 RefSeq gene 494571 495212 . + . ID=gene-LNP58_RS02310;Name=LNP58_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02310;old_locus_tag=LNP58_02310 NZ_CP086372.1 Protein Homology CDS 494571 495212 . + 0 ID=cds-WP_044757022.1;Parent=gene-LNP58_RS02310;Dbxref=Genbank:WP_044757022.1;Name=WP_044757022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157674.1;locus_tag=LNP58_RS02310;product=M23 family metallopeptidase;protein_id=WP_044757022.1;transl_table=11 NZ_CP086372.1 RefSeq gene 495270 495611 . + . ID=gene-LNP58_RS02315;Name=LNP58_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02315;old_locus_tag=LNP58_02315 NZ_CP086372.1 Protein Homology CDS 495270 495611 . + 0 ID=cds-WP_027703896.1;Parent=gene-LNP58_RS02315;Dbxref=Genbank:WP_027703896.1;Name=WP_027703896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157675.1;locus_tag=LNP58_RS02315;product=DUF3861 family protein;protein_id=WP_027703896.1;transl_table=11 NZ_CP086372.1 RefSeq gene 495855 496211 . + . ID=gene-LNP58_RS02320;Name=LNP58_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02320;old_locus_tag=LNP58_02320 NZ_CP086372.1 Protein Homology CDS 495855 496211 . + 0 ID=cds-WP_027703897.1;Parent=gene-LNP58_RS02320;Dbxref=Genbank:WP_027703897.1;Name=WP_027703897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157676.1;locus_tag=LNP58_RS02320;product=hypothetical protein;protein_id=WP_027703897.1;transl_table=11 NZ_CP086372.1 RefSeq gene 496267 496863 . + . ID=gene-LNP58_RS02325;Name=LNP58_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02325;old_locus_tag=LNP58_02325 NZ_CP086372.1 Protein Homology CDS 496267 496863 . + 0 ID=cds-WP_011258212.1;Parent=gene-LNP58_RS02325;Dbxref=Genbank:WP_011258212.1;Name=WP_011258212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487749.1;locus_tag=LNP58_RS02325;product=DUF1439 domain-containing protein;protein_id=WP_011258212.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 496981 497337 . - . ID=gene-LNP58_RS02330;Name=LNP58_RS02330;end_range=497337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02330;old_locus_tag=LNP58_02330;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 496981 497337 . - 0 ID=cds-LNP58_RS02330;Parent=gene-LNP58_RS02330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=497337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157678.1;locus_tag=LNP58_RS02330;partial=true;product=DJ-1/PfpI family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 497397 497473 . + . ID=gene-LNP58_RS02335;Name=LNP58_RS02335;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02335;old_locus_tag=LNP58_02335 NZ_CP086372.1 cmsearch ncRNA 497397 497473 . + . ID=rna-LNP58_RS02335;Parent=gene-LNP58_RS02335;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02335;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 497397 497473 . + . ID=exon-LNP58_RS02335-1;Parent=rna-LNP58_RS02335;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02335;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 497483 497686 . - . ID=gene-LNP58_RS02340;Name=LNP58_RS02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02340;old_locus_tag=LNP58_02340;partial=true;pseudo=true;start_range=.,497483 NZ_CP086372.1 Protein Homology CDS 497483 497686 . - 0 ID=cds-LNP58_RS02340;Parent=gene-LNP58_RS02340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157678.1;locus_tag=LNP58_RS02340;partial=true;product=peptidase;pseudo=true;start_range=.,497483;transl_table=11 NZ_CP086372.1 RefSeq gene 497791 498258 . - . ID=gene-LNP58_RS02345;Name=LNP58_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02345;old_locus_tag=LNP58_02345 NZ_CP086372.1 Protein Homology CDS 497791 498258 . - 0 ID=cds-WP_003487757.1;Parent=gene-LNP58_RS02345;Dbxref=Genbank:WP_003487757.1;Name=WP_003487757.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=LNP58_RS02345;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_003487757.1;transl_table=11 NZ_CP086372.1 RefSeq gene 498430 498888 . + . ID=gene-LNP58_RS02350;Name=LNP58_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02350;old_locus_tag=LNP58_02350 NZ_CP086372.1 Protein Homology CDS 498430 498888 . + 0 ID=cds-WP_011407954.1;Parent=gene-LNP58_RS02350;Dbxref=Genbank:WP_011407954.1;Name=WP_011407954.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369303.1;locus_tag=LNP58_RS02350;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_011407954.1;transl_table=11 NZ_CP086372.1 RefSeq gene 498904 500361 . + . ID=gene-LNP58_RS02355;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LNP58_RS02355;old_locus_tag=LNP58_02355 NZ_CP086372.1 Protein Homology CDS 498904 500361 . + 0 ID=cds-WP_075242215.1;Parent=gene-LNP58_RS02355;Dbxref=Genbank:WP_075242215.1;Name=WP_075242215.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902344.1;locus_tag=LNP58_RS02355;product=Fe-S cluster assembly protein SufB;protein_id=WP_075242215.1;transl_table=11 NZ_CP086372.1 RefSeq gene 500619 501383 . + . ID=gene-LNP58_RS02360;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LNP58_RS02360;old_locus_tag=LNP58_02360 NZ_CP086372.1 Protein Homology CDS 500619 501383 . + 0 ID=cds-WP_011407952.1;Parent=gene-LNP58_RS02360;Dbxref=Genbank:WP_011407952.1;Name=WP_011407952.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157680.1;locus_tag=LNP58_RS02360;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011407952.1;transl_table=11 NZ_CP086372.1 RefSeq gene 501383 502645 . + . ID=gene-LNP58_RS02365;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LNP58_RS02365;old_locus_tag=LNP58_02365 NZ_CP086372.1 Protein Homology CDS 501383 502645 . + 0 ID=cds-WP_011258208.1;Parent=gene-LNP58_RS02365;Dbxref=Genbank:WP_011258208.1;Name=WP_011258208.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090672.1;locus_tag=LNP58_RS02365;product=Fe-S cluster assembly protein SufD;protein_id=WP_011258208.1;transl_table=11 NZ_CP086372.1 RefSeq gene 502642 503886 . + . ID=gene-LNP58_RS02370;Name=LNP58_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02370;old_locus_tag=LNP58_02370 NZ_CP086372.1 Protein Homology CDS 502642 503886 . + 0 ID=cds-WP_011258207.1;Parent=gene-LNP58_RS02370;Dbxref=Genbank:WP_011258207.1;Name=WP_011258207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157682.1;locus_tag=LNP58_RS02370;product=cysteine desulfurase;protein_id=WP_011258207.1;transl_table=11 NZ_CP086372.1 RefSeq gene 504137 504676 . + . ID=gene-LNP58_RS02375;Name=LNP58_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02375;old_locus_tag=LNP58_02375 NZ_CP086372.1 Protein Homology CDS 504137 504676 . + 0 ID=cds-WP_011258206.1;Parent=gene-LNP58_RS02375;Dbxref=Genbank:WP_011258206.1;Name=WP_011258206.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157683.1;locus_tag=LNP58_RS02375;product=GNAT family N-acetyltransferase;protein_id=WP_011258206.1;transl_table=11 NZ_CP086372.1 RefSeq gene 504673 505002 . + . ID=gene-LNP58_RS02380;Name=LNP58_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02380;old_locus_tag=LNP58_02380 NZ_CP086372.1 Protein Homology CDS 504673 505002 . + 0 ID=cds-WP_011258205.1;Parent=gene-LNP58_RS02380;Dbxref=Genbank:WP_011258205.1;Name=WP_011258205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508448.1;locus_tag=LNP58_RS02380;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_011258205.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 505148 505417 . - . ID=gene-LNP58_RS02385;Name=LNP58_RS02385;end_range=505417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02385;old_locus_tag=LNP58_02385;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 505148 505417 . - 0 ID=cds-LNP58_RS02385;Parent=gene-LNP58_RS02385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=505417,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS02385;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 505489 505833 . + . ID=gene-LNP58_RS02390;Name=LNP58_RS02390;end_range=505833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02390;old_locus_tag=LNP58_02390;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 505489 505833 . + 0 ID=cds-LNP58_RS02390;Parent=gene-LNP58_RS02390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=505833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS02390;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 505961 506850 . + . ID=gene-LNP58_RS02395;Name=LNP58_RS02395;end_range=506850,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02395;old_locus_tag=LNP58_02395;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 505961 506850 . + 0 ID=cds-LNP58_RS02395;Parent=gene-LNP58_RS02395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=506850,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=LNP58_RS02395;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 506938 507903 . + . ID=gene-LNP58_RS02400;Name=LNP58_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02400;old_locus_tag=LNP58_02400 NZ_CP086372.1 Protein Homology CDS 506938 507903 . + 0 ID=cds-WP_109181895.1;Parent=gene-LNP58_RS02400;Dbxref=Genbank:WP_109181895.1;Name=WP_109181895.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS02400;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181895.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 507911 508069 . + . ID=gene-LNP58_RS02405;Name=LNP58_RS02405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02405;old_locus_tag=LNP58_02405;partial=true;pseudo=true;start_range=.,507911 NZ_CP086372.1 Protein Homology CDS 507911 508069 . + 0 ID=cds-LNP58_RS02405;Parent=gene-LNP58_RS02405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=LNP58_RS02405;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,507911;transl_table=11 NZ_CP086372.1 RefSeq gene 508624 508890 . + . ID=gene-LNP58_RS02410;Name=LNP58_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02410;old_locus_tag=LNP58_02410 NZ_CP086372.1 Protein Homology CDS 508624 508890 . + 0 ID=cds-WP_125168743.1;Parent=gene-LNP58_RS02410;Dbxref=Genbank:WP_125168743.1;Name=WP_125168743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363233.1;locus_tag=LNP58_RS02410;product=hypothetical protein;protein_id=WP_125168743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 509168 510322 . + . ID=gene-LNP58_RS02415;Name=LNP58_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02415;old_locus_tag=LNP58_02415 NZ_CP086372.1 Protein Homology CDS 509168 510322 . + 0 ID=cds-WP_011407949.1;Parent=gene-LNP58_RS02415;Dbxref=Genbank:WP_011407949.1;Name=WP_011407949.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258201.1;locus_tag=LNP58_RS02415;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_011407949.1;transl_table=11 NZ_CP086372.1 RefSeq gene 510322 511644 . + . ID=gene-LNP58_RS02420;Name=LNP58_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02420;old_locus_tag=LNP58_02420 NZ_CP086372.1 Protein Homology CDS 510322 511644 . + 0 ID=cds-WP_011258200.1;Parent=gene-LNP58_RS02420;Dbxref=Genbank:WP_011258200.1;Name=WP_011258200.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258200.1;locus_tag=LNP58_RS02420;product=PLP-dependent transferase;protein_id=WP_011258200.1;transl_table=11 NZ_CP086372.1 RefSeq gene 511644 512711 . + . ID=gene-LNP58_RS02425;Name=LNP58_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02425;old_locus_tag=LNP58_02425 NZ_CP086372.1 Protein Homology CDS 511644 512711 . + 0 ID=cds-WP_011258199.1;Parent=gene-LNP58_RS02425;Dbxref=Genbank:WP_011258199.1;Name=WP_011258199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302839.1;locus_tag=LNP58_RS02425;product=fatty acid desaturase family protein;protein_id=WP_011258199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 512729 513589 . + . ID=gene-LNP58_RS02430;Name=LNP58_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02430;old_locus_tag=LNP58_02430 NZ_CP086372.1 Protein Homology CDS 512729 513589 . + 0 ID=cds-WP_011407947.1;Parent=gene-LNP58_RS02430;Dbxref=Genbank:WP_011407947.1;Name=WP_011407947.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477131.1;locus_tag=LNP58_RS02430;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_011407947.1;transl_table=11 NZ_CP086372.1 RefSeq gene 513624 514223 . + . ID=gene-LNP58_RS02435;Name=LNP58_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02435;old_locus_tag=LNP58_02435 NZ_CP086372.1 Protein Homology CDS 513624 514223 . + 0 ID=cds-WP_011407946.1;Parent=gene-LNP58_RS02435;Dbxref=Genbank:WP_011407946.1;Name=WP_011407946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302837.1;locus_tag=LNP58_RS02435;product=LysE family translocator;protein_id=WP_011407946.1;transl_table=11 NZ_CP086372.1 RefSeq gene 514290 515225 . + . ID=gene-LNP58_RS02440;Name=LNP58_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02440;old_locus_tag=LNP58_02440 NZ_CP086372.1 Protein Homology CDS 514290 515225 . + 0 ID=cds-WP_011407945.1;Parent=gene-LNP58_RS02440;Dbxref=Genbank:WP_011407945.1;Name=WP_011407945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407945.1;locus_tag=LNP58_RS02440;product=homoserine O-succinyltransferase;protein_id=WP_011407945.1;transl_table=11 NZ_CP086372.1 RefSeq gene 515291 516643 . + . ID=gene-LNP58_RS02445;Name=LNP58_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02445;old_locus_tag=LNP58_02445 NZ_CP086372.1 Protein Homology CDS 515291 516643 . + 0 ID=cds-WP_075239694.1;Parent=gene-LNP58_RS02445;Dbxref=Genbank:WP_075239694.1;Name=WP_075239694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466434.1;locus_tag=LNP58_RS02445;product=glutamine synthetase family protein;protein_id=WP_075239694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 516735 517919 . - . ID=gene-LNP58_RS02450;Name=LNP58_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02450;old_locus_tag=LNP58_02450 NZ_CP086372.1 Protein Homology CDS 516735 517919 . - 0 ID=cds-WP_011407609.1;Parent=gene-LNP58_RS02450;Dbxref=Genbank:WP_011407609.1;Name=WP_011407609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS02450;product=IS256-like element IS1113 family transposase;protein_id=WP_011407609.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 518074 518529 . + . ID=gene-LNP58_RS02455;Name=LNP58_RS02455;end_range=518529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02455;old_locus_tag=LNP58_02455;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 518074 518529 . + 0 ID=cds-LNP58_RS02455;Parent=gene-LNP58_RS02455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=518529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS02455;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 518658 519403 . + . ID=gene-LNP58_RS02460;Name=LNP58_RS02460;end_range=519403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02460;old_locus_tag=LNP58_02460;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 518658 519403 . + 0 ID=cds-LNP58_RS02460;Parent=gene-LNP58_RS02460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=519403,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=LNP58_RS02460;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 519415 520110 . + . ID=gene-LNP58_RS02465;Name=LNP58_RS02465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02465;old_locus_tag=LNP58_02465;partial=true;pseudo=true;start_range=.,519415 NZ_CP086372.1 Protein Homology CDS 519415 520110 . + 0 ID=cds-LNP58_RS02465;Parent=gene-LNP58_RS02465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS02465;partial=true;product=transposase;pseudo=true;start_range=.,519415;transl_table=11 NZ_CP086372.1 RefSeq gene 520709 523033 . - . ID=gene-LNP58_RS02470;Name=LNP58_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02470;old_locus_tag=LNP58_02470 NZ_CP086372.1 Protein Homology CDS 520709 523033 . - 0 ID=cds-WP_011407940.1;Parent=gene-LNP58_RS02470;Dbxref=Genbank:WP_011407940.1;Name=WP_011407940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304704.1;locus_tag=LNP58_RS02470;product=hypothetical protein;protein_id=WP_011407940.1;transl_table=11 NZ_CP086372.1 RefSeq gene 523058 524926 . - . ID=gene-LNP58_RS02475;Name=LNP58_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02475;old_locus_tag=LNP58_02475 NZ_CP086372.1 Protein Homology CDS 523058 524926 . - 0 ID=cds-WP_011407939.1;Parent=gene-LNP58_RS02475;Dbxref=Genbank:WP_011407939.1;Name=WP_011407939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928780.1;locus_tag=LNP58_RS02475;product=ATP-binding protein;protein_id=WP_011407939.1;transl_table=11 NZ_CP086372.1 RefSeq gene 525139 526494 . - . ID=gene-LNP58_RS02480;Name=LNP58_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02480;old_locus_tag=LNP58_02480 NZ_CP086372.1 Protein Homology CDS 525139 526494 . - 0 ID=cds-WP_173340392.1;Parent=gene-LNP58_RS02480;Dbxref=Genbank:WP_173340392.1;Name=WP_173340392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156588.1;locus_tag=LNP58_RS02480;product=helix-turn-helix transcriptional regulator;protein_id=WP_173340392.1;transl_table=11 NZ_CP086372.1 RefSeq gene 526705 526875 . - . ID=gene-LNP58_RS02485;Name=LNP58_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02485;old_locus_tag=LNP58_02485 NZ_CP086372.1 Protein Homology CDS 526705 526875 . - 0 ID=cds-WP_012445725.1;Parent=gene-LNP58_RS02485;Dbxref=Genbank:WP_012445725.1;Name=WP_012445725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504254.1;locus_tag=LNP58_RS02485;product=hypothetical protein;protein_id=WP_012445725.1;transl_table=11 NZ_CP086372.1 RefSeq gene 527331 528122 . + . ID=gene-LNP58_RS02490;Name=LNP58_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02490;old_locus_tag=LNP58_02490 NZ_CP086372.1 Protein Homology CDS 527331 528122 . + 0 ID=cds-WP_011407938.1;Parent=gene-LNP58_RS02490;Dbxref=Genbank:WP_011407938.1;Name=WP_011407938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156587.1;locus_tag=LNP58_RS02490;product=response regulator transcription factor;protein_id=WP_011407938.1;transl_table=11 NZ_CP086372.1 RefSeq gene 528340 528621 . - . ID=gene-LNP58_RS02495;Name=LNP58_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02495;old_locus_tag=LNP58_02495 NZ_CP086372.1 GeneMarkS-2+ CDS 528340 528621 . - 0 ID=cds-WP_228329696.1;Parent=gene-LNP58_RS02495;Dbxref=Genbank:WP_228329696.1;Name=WP_228329696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS02495;product=hypothetical protein;protein_id=WP_228329696.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 528632 529009 . - . ID=gene-LNP58_RS02500;Name=LNP58_RS02500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02500;old_locus_tag=LNP58_02500;pseudo=true NZ_CP086372.1 Protein Homology CDS 528632 529009 . - 0 ID=cds-LNP58_RS02500;Parent=gene-LNP58_RS02500;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009582697.1;locus_tag=LNP58_RS02500;product=DUF805 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 529174 530649 . - . ID=gene-LNP58_RS02505;Name=LNP58_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02505;old_locus_tag=LNP58_02505 NZ_CP086372.1 Protein Homology CDS 529174 530649 . - 0 ID=cds-WP_069959772.1;Parent=gene-LNP58_RS02505;Dbxref=Genbank:WP_069959772.1;Name=WP_069959772.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS02505;product=IS5-like element ISXoo5 family transposase;protein_id=WP_069959772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 530732 531550 . - . ID=gene-LNP58_RS02510;Name=LNP58_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02510;old_locus_tag=LNP58_02510 NZ_CP086372.1 Protein Homology CDS 530732 531550 . - 0 ID=cds-WP_033013356.1;Parent=gene-LNP58_RS02510;Dbxref=Genbank:WP_033013356.1;Name=WP_033013356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407936.1;locus_tag=LNP58_RS02510;product=alpha/beta hydrolase;protein_id=WP_033013356.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 531620 532560 . - . ID=gene-LNP58_RS02515;Name=bla;gbkey=Gene;gene=bla;gene_biotype=pseudogene;locus_tag=LNP58_RS02515;old_locus_tag=LNP58_02515;pseudo=true NZ_CP086372.1 Protein Homology CDS 531620 532560 . - 0 ID=cds-LNP58_RS02515;Parent=gene-LNP58_RS02515;Note=frameshifted;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258184.1;locus_tag=LNP58_RS02515;product=class A beta-lactamase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 532661 533506 . + . ID=gene-LNP58_RS02520;Name=ampR;gbkey=Gene;gene=ampR;gene_biotype=protein_coding;locus_tag=LNP58_RS02520;old_locus_tag=LNP58_02520 NZ_CP086372.1 Protein Homology CDS 532661 533506 . + 0 ID=cds-WP_011258183.1;Parent=gene-LNP58_RS02520;Dbxref=Genbank:WP_011258183.1;Name=WP_011258183.1;gbkey=CDS;gene=ampR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156667.1;locus_tag=LNP58_RS02520;product=LysR family transcriptional regulator AmpR;protein_id=WP_011258183.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 533530 534031 . - . ID=gene-LNP58_RS02525;Name=LNP58_RS02525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02525;old_locus_tag=LNP58_02525;pseudo=true NZ_CP086372.1 Protein Homology CDS 533530 534031 . - 0 ID=cds-LNP58_RS02525;Parent=gene-LNP58_RS02525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156668.1;locus_tag=LNP58_RS02525;product=YcxB family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 534080 534153 . - . ID=gene-LNP58_RS02530;Name=LNP58_RS02530;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02530;old_locus_tag=LNP58_02530 NZ_CP086372.1 cmsearch ncRNA 534080 534153 . - . ID=rna-LNP58_RS02530;Parent=gene-LNP58_RS02530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02530;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 534080 534153 . - . ID=exon-LNP58_RS02530-1;Parent=rna-LNP58_RS02530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02530;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 534228 536144 . - . ID=gene-LNP58_RS02535;Name=LNP58_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02535;old_locus_tag=LNP58_02535 NZ_CP086372.1 Protein Homology CDS 534228 536144 . - 0 ID=cds-WP_041182018.1;Parent=gene-LNP58_RS02535;Dbxref=Genbank:WP_041182018.1;Name=WP_041182018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924596.1;locus_tag=LNP58_RS02535;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_041182018.1;transl_table=11 NZ_CP086372.1 RefSeq gene 536324 538711 . + . ID=gene-LNP58_RS02540;Name=LNP58_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02540;old_locus_tag=LNP58_02540 NZ_CP086372.1 Protein Homology CDS 536324 538711 . + 0 ID=cds-WP_075242261.1;Parent=gene-LNP58_RS02540;Dbxref=Genbank:WP_075242261.1;Name=WP_075242261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156670.1;locus_tag=LNP58_RS02540;product=TonB-dependent receptor;protein_id=WP_075242261.1;transl_table=11 NZ_CP086372.1 RefSeq gene 539009 539084 . + . ID=gene-LNP58_RS02545;Name=LNP58_RS02545;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02545;old_locus_tag=LNP58_02545 NZ_CP086372.1 cmsearch ncRNA 539009 539084 . + . ID=rna-LNP58_RS02545;Parent=gene-LNP58_RS02545;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02545;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 539009 539084 . + . ID=exon-LNP58_RS02545-1;Parent=rna-LNP58_RS02545;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02545;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 539175 539615 . + . ID=gene-LNP58_RS02550;Name=LNP58_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02550;old_locus_tag=LNP58_02550 NZ_CP086372.1 Protein Homology CDS 539175 539615 . + 0 ID=cds-WP_069959771.1;Parent=gene-LNP58_RS02550;Dbxref=Genbank:WP_069959771.1;Name=WP_069959771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159330.1;locus_tag=LNP58_RS02550;product=VOC family protein;protein_id=WP_069959771.1;transl_table=11 NZ_CP086372.1 RefSeq gene 539889 542276 . + . ID=gene-LNP58_RS02555;Name=LNP58_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02555;old_locus_tag=LNP58_02555 NZ_CP086372.1 Protein Homology CDS 539889 542276 . + 0 ID=cds-WP_011258178.1;Parent=gene-LNP58_RS02555;Dbxref=Genbank:WP_011258178.1;Name=WP_011258178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921435.1;locus_tag=LNP58_RS02555;product=TonB-dependent receptor;protein_id=WP_011258178.1;transl_table=11 NZ_CP086372.1 RefSeq gene 542609 545008 . + . ID=gene-LNP58_RS02560;Name=LNP58_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02560;old_locus_tag=LNP58_02560 NZ_CP086372.1 Protein Homology CDS 542609 545008 . + 0 ID=cds-WP_069959770.1;Parent=gene-LNP58_RS02560;Dbxref=Genbank:WP_069959770.1;Name=WP_069959770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090820.1;locus_tag=LNP58_RS02560;product=TonB-dependent receptor;protein_id=WP_069959770.1;transl_table=11 NZ_CP086372.1 RefSeq gene 545126 545545 . - . ID=gene-LNP58_RS02565;Name=LNP58_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02565;old_locus_tag=LNP58_02565 NZ_CP086372.1 GeneMarkS-2+ CDS 545126 545545 . - 0 ID=cds-WP_228329695.1;Parent=gene-LNP58_RS02565;Dbxref=Genbank:WP_228329695.1;Name=WP_228329695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS02565;product=hypothetical protein;protein_id=WP_228329695.1;transl_table=11 NZ_CP086372.1 RefSeq gene 546108 547805 . + . ID=gene-LNP58_RS02570;Name=LNP58_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02570;old_locus_tag=LNP58_02570 NZ_CP086372.1 Protein Homology CDS 546108 547805 . + 0 ID=cds-WP_069959769.1;Parent=gene-LNP58_RS02570;Dbxref=Genbank:WP_069959769.1;Name=WP_069959769.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452404.1;locus_tag=LNP58_RS02570;product=Kef family K(+) transporter;protein_id=WP_069959769.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 547969 549069 . - . ID=gene-LNP58_RS02575;Name=LNP58_RS02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02575;old_locus_tag=LNP58_02575;pseudo=true NZ_CP086372.1 Protein Homology CDS 547969 549069 . - 0 ID=cds-LNP58_RS02575;Parent=gene-LNP58_RS02575;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS02575;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 549214 549975 . + . ID=gene-LNP58_RS02580;Name=LNP58_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02580;old_locus_tag=LNP58_02580 NZ_CP086372.1 Protein Homology CDS 549214 549975 . + 0 ID=cds-WP_011258173.1;Parent=gene-LNP58_RS02580;Dbxref=Genbank:WP_011258173.1;Name=WP_011258173.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913611.1;locus_tag=LNP58_RS02580;product=aldolase/citrate lyase family protein;protein_id=WP_011258173.1;transl_table=11 NZ_CP086372.1 RefSeq gene 549976 552117 . + . ID=gene-LNP58_RS02585;Name=LNP58_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02585;old_locus_tag=LNP58_02585 NZ_CP086372.1 Protein Homology CDS 549976 552117 . + 0 ID=cds-WP_011407927.1;Parent=gene-LNP58_RS02585;Dbxref=Genbank:WP_011407927.1;Name=WP_011407927.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488864.1;locus_tag=LNP58_RS02585;product=TonB-dependent siderophore receptor;protein_id=WP_011407927.1;transl_table=11 NZ_CP086372.1 RefSeq gene 552353 553579 . + . ID=gene-LNP58_RS02590;Name=LNP58_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02590;old_locus_tag=LNP58_02590 NZ_CP086372.1 Protein Homology CDS 552353 553579 . + 0 ID=cds-WP_011258171.1;Parent=gene-LNP58_RS02590;Dbxref=Genbank:WP_011258171.1;Name=WP_011258171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452407.1;locus_tag=LNP58_RS02590;product=siderophore biosynthesis protein PvsA;protein_id=WP_011258171.1;transl_table=11 NZ_CP086372.1 RefSeq gene 553576 555378 . + . ID=gene-LNP58_RS02595;Name=LNP58_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02595;old_locus_tag=LNP58_02595 NZ_CP086372.1 Protein Homology CDS 553576 555378 . + 0 ID=cds-WP_011258170.1;Parent=gene-LNP58_RS02595;Dbxref=Genbank:WP_011258170.1;Name=WP_011258170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571067.1;locus_tag=LNP58_RS02595;product=IucA/IucC family siderophore biosynthesis protein;protein_id=WP_011258170.1;transl_table=11 NZ_CP086372.1 RefSeq gene 555375 556571 . + . ID=gene-LNP58_RS02600;Name=LNP58_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02600;old_locus_tag=LNP58_02600 NZ_CP086372.1 Protein Homology CDS 555375 556571 . + 0 ID=cds-WP_011407926.1;Parent=gene-LNP58_RS02600;Dbxref=Genbank:WP_011407926.1;Name=WP_011407926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160094.1;locus_tag=LNP58_RS02600;product=MFS transporter;protein_id=WP_011407926.1;transl_table=11 NZ_CP086372.1 RefSeq gene 556549 558318 . + . ID=gene-LNP58_RS02605;Name=LNP58_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02605;old_locus_tag=LNP58_02605 NZ_CP086372.1 Protein Homology CDS 556549 558318 . + 0 ID=cds-WP_011407925.1;Parent=gene-LNP58_RS02605;Dbxref=Genbank:WP_011407925.1;Name=WP_011407925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850679.1;locus_tag=LNP58_RS02605;product=iron transporter;protein_id=WP_011407925.1;transl_table=11 NZ_CP086372.1 RefSeq gene 558315 559511 . + . ID=gene-LNP58_RS02610;Name=LNP58_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02610;old_locus_tag=LNP58_02610 NZ_CP086372.1 Protein Homology CDS 558315 559511 . + 0 ID=cds-WP_011407924.1;Parent=gene-LNP58_RS02610;Dbxref=Genbank:WP_011407924.1;Name=WP_011407924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305442.1;locus_tag=LNP58_RS02610;product=type III PLP-dependent enzyme;protein_id=WP_011407924.1;transl_table=11 NZ_CP086372.1 RefSeq gene 559516 559592 . - . ID=gene-LNP58_RS02615;Name=LNP58_RS02615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02615;old_locus_tag=LNP58_02615 NZ_CP086372.1 cmsearch ncRNA 559516 559592 . - . ID=rna-LNP58_RS02615;Parent=gene-LNP58_RS02615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02615;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 559516 559592 . - . ID=exon-LNP58_RS02615-1;Parent=rna-LNP58_RS02615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02615;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 559686 560420 . - . ID=gene-LNP58_RS02620;Name=LNP58_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02620;old_locus_tag=LNP58_02620 NZ_CP086372.1 Protein Homology CDS 559686 560420 . - 0 ID=cds-WP_011258166.1;Parent=gene-LNP58_RS02620;Dbxref=Genbank:WP_011258166.1;Name=WP_011258166.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963730.1;locus_tag=LNP58_RS02620;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_011258166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 560417 561007 . - . ID=gene-LNP58_RS02625;Name=LNP58_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02625;old_locus_tag=LNP58_02625 NZ_CP086372.1 Protein Homology CDS 560417 561007 . - 0 ID=cds-WP_011258165.1;Parent=gene-LNP58_RS02625;Dbxref=Genbank:WP_011258165.1;Name=WP_011258165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850683.1;locus_tag=LNP58_RS02625;product=histidine phosphatase family protein;protein_id=WP_011258165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 561004 562050 . - . ID=gene-LNP58_RS02630;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LNP58_RS02630;old_locus_tag=LNP58_02630 NZ_CP086372.1 Protein Homology CDS 561004 562050 . - 0 ID=cds-WP_011407923.1;Parent=gene-LNP58_RS02630;Dbxref=Genbank:WP_011407923.1;Name=WP_011407923.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304849.1;locus_tag=LNP58_RS02630;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_011407923.1;transl_table=11 NZ_CP086372.1 RefSeq gene 562047 562568 . - . ID=gene-LNP58_RS02635;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LNP58_RS02635;old_locus_tag=LNP58_02635 NZ_CP086372.1 Protein Homology CDS 562047 562568 . - 0 ID=cds-WP_011258163.1;Parent=gene-LNP58_RS02635;Dbxref=Genbank:WP_011258163.1;Name=WP_011258163.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488884.1;locus_tag=LNP58_RS02635;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_011258163.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 562556 562667 . - . ID=gene-LNP58_RS02640;Name=LNP58_RS02640;end_range=562667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02640;old_locus_tag=LNP58_02640;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 562556 562667 . - 0 ID=cds-LNP58_RS02640;Parent=gene-LNP58_RS02640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=562667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913596.1;locus_tag=LNP58_RS02640;partial=true;product=adenosylcobinamide kinase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 562671 563009 . - . ID=gene-LNP58_RS02645;Name=LNP58_RS02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02645;old_locus_tag=LNP58_02645;partial=true;pseudo=true;start_range=.,562671 NZ_CP086372.1 Protein Homology CDS 562671 563009 . - 0 ID=cds-LNP58_RS02645;Parent=gene-LNP58_RS02645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014402739.1;locus_tag=LNP58_RS02645;partial=true;product=adenosylcobinamide kinase;pseudo=true;start_range=.,562671;transl_table=11 NZ_CP086372.1 RefSeq gene 563082 563693 . - . ID=gene-LNP58_RS02650;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=LNP58_RS02650;old_locus_tag=LNP58_02650 NZ_CP086372.1 Protein Homology CDS 563082 563693 . - 0 ID=cds-WP_011258162.1;Parent=gene-LNP58_RS02650;Dbxref=Genbank:WP_011258162.1;Name=WP_011258162.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571051.1;locus_tag=LNP58_RS02650;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011258162.1;transl_table=11 NZ_CP086372.1 RefSeq gene 563690 564289 . - . ID=gene-LNP58_RS02655;Name=LNP58_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02655;old_locus_tag=LNP58_02655 NZ_CP086372.1 Protein Homology CDS 563690 564289 . - 0 ID=cds-WP_027703819.1;Parent=gene-LNP58_RS02655;Dbxref=Genbank:WP_027703819.1;Name=WP_027703819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963715.1;locus_tag=LNP58_RS02655;product=hypothetical protein;protein_id=WP_027703819.1;transl_table=11 NZ_CP086372.1 RefSeq gene 564289 564882 . - . ID=gene-LNP58_RS02660;Name=LNP58_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02660;old_locus_tag=LNP58_02660 NZ_CP086372.1 Protein Homology CDS 564289 564882 . - 0 ID=cds-WP_011258160.1;Parent=gene-LNP58_RS02660;Dbxref=Genbank:WP_011258160.1;Name=WP_011258160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304846.1;locus_tag=LNP58_RS02660;product=hypothetical protein;protein_id=WP_011258160.1;transl_table=11 NZ_CP086372.1 RefSeq gene 565169 566428 . + . ID=gene-LNP58_RS02665;Name=LNP58_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02665;old_locus_tag=LNP58_02665 NZ_CP086372.1 Protein Homology CDS 565169 566428 . + 0 ID=cds-WP_228329736.1;Parent=gene-LNP58_RS02665;Dbxref=Genbank:WP_228329736.1;Name=WP_228329736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=LNP58_RS02665;product=IS701-like element ISXo15 family transposase;protein_id=WP_228329736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 566519 566593 . - . ID=gene-LNP58_RS02670;Name=LNP58_RS02670;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02670;old_locus_tag=LNP58_02670 NZ_CP086372.1 cmsearch ncRNA 566519 566593 . - . ID=rna-LNP58_RS02670;Parent=gene-LNP58_RS02670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02670;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 566519 566593 . - . ID=exon-LNP58_RS02670-1;Parent=rna-LNP58_RS02670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02670;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 566655 568532 . - . ID=gene-LNP58_RS02675;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=LNP58_RS02675;old_locus_tag=LNP58_02675 NZ_CP086372.1 Protein Homology CDS 566655 568532 . - 0 ID=cds-WP_011258158.1;Parent=gene-LNP58_RS02675;Dbxref=Genbank:WP_011258158.1;Name=WP_011258158.1;Ontology_term=GO:0015889,GO:0015420,GO:0019867;gbkey=CDS;gene=btuB;go_component=outer membrane|0019867||IEA;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117952.1;locus_tag=LNP58_RS02675;product=TonB-dependent vitamin B12 receptor;protein_id=WP_011258158.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 568649 568874 . - . ID=id-NZ_CP086372.1:568649..568874;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq pseudogene 569041 569175 . - . ID=gene-LNP58_RS02680;Name=LNP58_RS02680;end_range=569175,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02680;old_locus_tag=LNP58_02680;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 569041 569175 . - 0 ID=cds-LNP58_RS02680;Parent=gene-LNP58_RS02680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=569175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LNP58_RS02680;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 569185 569535 . - . ID=gene-LNP58_RS02685;Name=LNP58_RS02685;end_range=569535,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02685;old_locus_tag=LNP58_02685;partial=true;pseudo=true;start_range=.,569185 NZ_CP086372.1 Protein Homology CDS 569185 569535 . - 0 ID=cds-LNP58_RS02685;Parent=gene-LNP58_RS02685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=569535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503409.1;locus_tag=LNP58_RS02685;partial=true;product=transposase;pseudo=true;start_range=.,569185;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 569546 570331 . - . ID=gene-LNP58_RS02690;Name=LNP58_RS02690;end_range=570331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02690;old_locus_tag=LNP58_02690;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 569546 570331 . - 0 ID=cds-LNP58_RS02690;Parent=gene-LNP58_RS02690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=570331,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS02690;partial=true;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 570455 571495 . + . ID=gene-LNP58_RS02695;Name=LNP58_RS02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02695;old_locus_tag=LNP58_02695;pseudo=true NZ_CP086372.1 Protein Homology CDS 570455 571495 . + 0 ID=cds-LNP58_RS02695;Parent=gene-LNP58_RS02695;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS02695;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 571644 571769 . - . ID=gene-LNP58_RS02700;Name=LNP58_RS02700;end_range=571769,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02700;old_locus_tag=LNP58_02700;partial=true;pseudo=true;start_range=.,571644 NZ_CP086372.1 Protein Homology CDS 571644 571769 . - 0 ID=cds-LNP58_RS02700;Parent=gene-LNP58_RS02700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=571769,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038183.1;locus_tag=LNP58_RS02700;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,571644;transl_table=11 NZ_CP086372.1 RefSeq gene 571770 572738 . - . ID=gene-LNP58_RS02705;Name=LNP58_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02705;old_locus_tag=LNP58_02705 NZ_CP086372.1 Protein Homology CDS 571770 572738 . - 0 ID=cds-WP_103057303.1;Parent=gene-LNP58_RS02705;Dbxref=Genbank:WP_103057303.1;Name=WP_103057303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258153.1;locus_tag=LNP58_RS02705;product=hypothetical protein;protein_id=WP_103057303.1;transl_table=11 NZ_CP086372.1 RefSeq gene 572806 575391 . - . ID=gene-LNP58_RS02710;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LNP58_RS02710;old_locus_tag=LNP58_02710 NZ_CP086372.1 Protein Homology CDS 572806 575391 . - 0 ID=cds-WP_011407916.1;Parent=gene-LNP58_RS02710;Dbxref=Genbank:WP_011407916.1;Name=WP_011407916.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009580969.1;locus_tag=LNP58_RS02710;product=ATP-dependent chaperone ClpB;protein_id=WP_011407916.1;transl_table=11 NZ_CP086372.1 RefSeq gene 575372 575494 . + . ID=gene-LNP58_RS23390;Name=LNP58_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23390 NZ_CP086372.1 GeneMarkS-2+ CDS 575372 575494 . + 0 ID=cds-WP_256364563.1;Parent=gene-LNP58_RS23390;Dbxref=Genbank:WP_256364563.1;Name=WP_256364563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23390;product=hypothetical protein;protein_id=WP_256364563.1;transl_table=11 NZ_CP086372.1 RefSeq gene 575837 576142 . + . ID=gene-LNP58_RS02715;Name=LNP58_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02715;old_locus_tag=LNP58_02715 NZ_CP086372.1 Protein Homology CDS 575837 576142 . + 0 ID=cds-WP_011258151.1;Parent=gene-LNP58_RS02715;Dbxref=Genbank:WP_011258151.1;Name=WP_011258151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258151.1;locus_tag=LNP58_RS02715;product=GIY-YIG nuclease family protein;protein_id=WP_011258151.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 576187 576438 . + . ID=gene-LNP58_RS02720;Name=LNP58_RS02720;end_range=576438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02720;old_locus_tag=LNP58_02720;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 576187 576438 . + 0 ID=cds-LNP58_RS02720;Parent=gene-LNP58_RS02720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=576438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812100.1;locus_tag=LNP58_RS02720;partial=true;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 576514 577753 . - . ID=gene-LNP58_RS02725;Name=LNP58_RS02725;end_range=577753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02725;old_locus_tag=LNP58_02725;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 576514 577753 . - 0 ID=cds-LNP58_RS02725;Parent=gene-LNP58_RS02725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=577753,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS02725;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 577773 578987 . - . ID=gene-LNP58_RS02730;Name=LNP58_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02730;old_locus_tag=LNP58_02730 NZ_CP086372.1 Protein Homology CDS 577773 578987 . - 0 ID=cds-WP_011407913.1;Parent=gene-LNP58_RS02730;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS02730;product=IS4-like element ISXo14 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 579105 579272 . - . ID=gene-LNP58_RS02735;Name=LNP58_RS02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02735;old_locus_tag=LNP58_02735;partial=true;pseudo=true;start_range=.,579105 NZ_CP086372.1 Protein Homology CDS 579105 579272 . - 0 ID=cds-LNP58_RS02735;Parent=gene-LNP58_RS02735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=LNP58_RS02735;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,579105;transl_table=11 NZ_CP086372.1 RefSeq gene 579407 579814 . - . ID=gene-LNP58_RS02740;Name=LNP58_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02740;old_locus_tag=LNP58_02740 NZ_CP086372.1 Protein Homology CDS 579407 579814 . - 0 ID=cds-WP_011407912.1;Parent=gene-LNP58_RS02740;Dbxref=Genbank:WP_011407912.1;Name=WP_011407912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504229.1;locus_tag=LNP58_RS02740;product=RNA-binding S4 domain-containing protein;protein_id=WP_011407912.1;transl_table=11 NZ_CP086372.1 RefSeq gene 580155 581645 . + . ID=gene-LNP58_RS02745;Name=LNP58_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02745;old_locus_tag=LNP58_02745 NZ_CP086372.1 Protein Homology CDS 580155 581645 . + 0 ID=cds-WP_069965090.1;Parent=gene-LNP58_RS02745;Dbxref=Genbank:WP_069965090.1;Name=WP_069965090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571123.1;locus_tag=LNP58_RS02745;product=MATE family efflux transporter;protein_id=WP_069965090.1;transl_table=11 NZ_CP086372.1 RefSeq gene 581803 581879 . + . ID=gene-LNP58_RS02750;Name=LNP58_RS02750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02750;old_locus_tag=LNP58_02750 NZ_CP086372.1 cmsearch ncRNA 581803 581879 . + . ID=rna-LNP58_RS02750;Parent=gene-LNP58_RS02750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02750;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 581803 581879 . + . ID=exon-LNP58_RS02750-1;Parent=rna-LNP58_RS02750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02750;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 582271 582678 . - . ID=gene-LNP58_RS02755;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LNP58_RS02755;old_locus_tag=LNP58_02755 NZ_CP086372.1 Protein Homology CDS 582271 582678 . - 0 ID=cds-WP_005989873.1;Parent=gene-LNP58_RS02755;Dbxref=Genbank:WP_005989873.1;Name=WP_005989873.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470862.1;locus_tag=LNP58_RS02755;product=50S ribosomal protein L19;protein_id=WP_005989873.1;transl_table=11 NZ_CP086372.1 RefSeq gene 582802 583581 . - . ID=gene-LNP58_RS02760;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LNP58_RS02760;old_locus_tag=LNP58_02760 NZ_CP086372.1 Protein Homology CDS 582802 583581 . - 0 ID=cds-WP_011407910.1;Parent=gene-LNP58_RS02760;Dbxref=Genbank:WP_011407910.1;Name=WP_011407910.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407910.1;locus_tag=LNP58_RS02760;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011407910.1;transl_table=11 NZ_CP086372.1 RefSeq gene 583647 584159 . - . ID=gene-LNP58_RS02765;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LNP58_RS02765;old_locus_tag=LNP58_02765 NZ_CP086372.1 Protein Homology CDS 583647 584159 . - 0 ID=cds-WP_011407909.1;Parent=gene-LNP58_RS02765;Dbxref=Genbank:WP_011407909.1;Name=WP_011407909.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407909.1;locus_tag=LNP58_RS02765;product=ribosome maturation factor RimM;protein_id=WP_011407909.1;transl_table=11 NZ_CP086372.1 RefSeq gene 584203 584460 . - . ID=gene-LNP58_RS02770;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LNP58_RS02770;old_locus_tag=LNP58_02770 NZ_CP086372.1 Protein Homology CDS 584203 584460 . - 0 ID=cds-WP_011258141.1;Parent=gene-LNP58_RS02770;Dbxref=Genbank:WP_011258141.1;Name=WP_011258141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036396.1;locus_tag=LNP58_RS02770;product=30S ribosomal protein S16;protein_id=WP_011258141.1;transl_table=11 NZ_CP086372.1 RefSeq gene 584570 585367 . - . ID=gene-LNP58_RS02775;Name=LNP58_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02775;old_locus_tag=LNP58_02775 NZ_CP086372.1 Protein Homology CDS 584570 585367 . - 0 ID=cds-WP_011407908.1;Parent=gene-LNP58_RS02775;Dbxref=Genbank:WP_011407908.1;Name=WP_011407908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301831.1;locus_tag=LNP58_RS02775;product=aminotransferase class IV family protein;protein_id=WP_011407908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 585358 586428 . - . ID=gene-LNP58_RS02780;Name=LNP58_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02780;old_locus_tag=LNP58_02780 NZ_CP086372.1 Protein Homology CDS 585358 586428 . - 0 ID=cds-WP_011407907.1;Parent=gene-LNP58_RS02780;Dbxref=Genbank:WP_011407907.1;Name=WP_011407907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484227.1;locus_tag=LNP58_RS02780;product=nitronate monooxygenase;protein_id=WP_011407907.1;transl_table=11 NZ_CP086372.1 RefSeq gene 586553 586628 . - . ID=gene-LNP58_RS02785;Name=LNP58_RS02785;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS02785;old_locus_tag=LNP58_02785 NZ_CP086372.1 cmsearch ncRNA 586553 586628 . - . ID=rna-LNP58_RS02785;Parent=gene-LNP58_RS02785;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02785;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 586553 586628 . - . ID=exon-LNP58_RS02785-1;Parent=rna-LNP58_RS02785;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02785;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 588001 589377 . - . ID=gene-LNP58_RS02790;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LNP58_RS02790;old_locus_tag=LNP58_02790 NZ_CP086372.1 Protein Homology CDS 588001 589377 . - 0 ID=cds-WP_011407905.1;Parent=gene-LNP58_RS02790;Dbxref=Genbank:WP_011407905.1;Name=WP_011407905.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407905.1;locus_tag=LNP58_RS02790;product=signal recognition particle protein;protein_id=WP_011407905.1;transl_table=11 NZ_CP086372.1 RefSeq gene 589679 590644 . - . ID=gene-LNP58_RS02795;Name=LNP58_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02795;old_locus_tag=LNP58_02795 NZ_CP086372.1 Protein Homology CDS 589679 590644 . - 0 ID=cds-WP_109181891.1;Parent=gene-LNP58_RS02795;Dbxref=Genbank:WP_109181891.1;Name=WP_109181891.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS02795;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181891.1;transl_table=11 NZ_CP086372.1 RefSeq gene 590874 591665 . + . ID=gene-LNP58_RS02800;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LNP58_RS02800;old_locus_tag=LNP58_02800 NZ_CP086372.1 Protein Homology CDS 590874 591665 . + 0 ID=cds-WP_011407903.1;Parent=gene-LNP58_RS02800;Dbxref=Genbank:WP_011407903.1;Name=WP_011407903.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484236.1;locus_tag=LNP58_RS02800;product=cytochrome c biogenesis protein CcsA;protein_id=WP_011407903.1;transl_table=11 NZ_CP086372.1 RefSeq gene 591953 593002 . - . ID=gene-LNP58_RS02805;Name=LNP58_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02805;old_locus_tag=LNP58_02805 NZ_CP086372.1 Protein Homology CDS 591953 593002 . - 0 ID=cds-WP_027704032.1;Parent=gene-LNP58_RS02805;Dbxref=Genbank:WP_027704032.1;Name=WP_027704032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302956.1;locus_tag=LNP58_RS02805;product=galactose mutarotase;protein_id=WP_027704032.1;transl_table=11 NZ_CP086372.1 RefSeq gene 593250 594833 . + . ID=gene-LNP58_RS02810;Name=LNP58_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02810;old_locus_tag=LNP58_02810 NZ_CP086372.1 Protein Homology CDS 593250 594833 . + 0 ID=cds-WP_011258133.1;Parent=gene-LNP58_RS02810;Dbxref=Genbank:WP_011258133.1;Name=WP_011258133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304880.1;locus_tag=LNP58_RS02810;product=alpha-L-arabinofuranosidase;protein_id=WP_011258133.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 595021 595170 . - . ID=gene-LNP58_RS02815;Name=LNP58_RS02815;end_range=595170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02815;old_locus_tag=LNP58_02815;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 595021 595170 . - 0 ID=cds-LNP58_RS02815;Parent=gene-LNP58_RS02815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=595170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS02815;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 595163 595291 . + . ID=gene-LNP58_RS23395;Name=LNP58_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23395 NZ_CP086372.1 GeneMarkS-2+ CDS 595163 595291 . + 0 ID=cds-WP_256364564.1;Parent=gene-LNP58_RS23395;Dbxref=Genbank:WP_256364564.1;Name=WP_256364564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23395;product=hypothetical protein;protein_id=WP_256364564.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 595331 596297 . - . ID=gene-LNP58_RS02820;Name=LNP58_RS02820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02820;old_locus_tag=LNP58_02820;pseudo=true NZ_CP086372.1 Protein Homology CDS 595331 596297 . - 0 ID=cds-LNP58_RS02820;Parent=gene-LNP58_RS02820;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS02820;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 596464 596904 . + . ID=gene-LNP58_RS02825;Name=LNP58_RS02825;end_range=596904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02825;old_locus_tag=LNP58_02825;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 596464 596904 . + 0 ID=cds-LNP58_RS02825;Parent=gene-LNP58_RS02825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=596904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS02825;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 596987 598096 . - . ID=gene-LNP58_RS02830;Name=LNP58_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02830;old_locus_tag=LNP58_02830 NZ_CP086372.1 Protein Homology CDS 596987 598096 . - 0 ID=cds-WP_133260518.1;Parent=gene-LNP58_RS02830;Dbxref=Genbank:WP_133260518.1;Name=WP_133260518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017747.2;locus_tag=LNP58_RS02830;product=HutD family protein;protein_id=WP_133260518.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 598031 599269 . + . ID=gene-LNP58_RS02835;Name=LNP58_RS02835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS02835;old_locus_tag=LNP58_02835;pseudo=true NZ_CP086372.1 Protein Homology CDS 598031 599269 . + 0 ID=cds-LNP58_RS02835;Parent=gene-LNP58_RS02835;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_085938460.1;locus_tag=LNP58_RS02835;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 cmsearch sequence_feature 598307 598423 . + . ID=id-LNP58_RS02835;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS02835;pseudo=true NZ_CP086372.1 RefSeq gene 599808 600215 . - . ID=gene-LNP58_RS02840;Name=LNP58_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02840;old_locus_tag=LNP58_02840 NZ_CP086372.1 Protein Homology CDS 599808 600215 . - 0 ID=cds-WP_011258127.1;Parent=gene-LNP58_RS02840;Dbxref=Genbank:WP_011258127.1;Name=WP_011258127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157693.1;locus_tag=LNP58_RS02840;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011258127.1;transl_table=11 NZ_CP086372.1 RefSeq gene 600340 601833 . + . ID=gene-LNP58_RS02845;Name=LNP58_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02845;old_locus_tag=LNP58_02845 NZ_CP086372.1 Protein Homology CDS 600340 601833 . + 0 ID=cds-WP_075242308.1;Parent=gene-LNP58_RS02845;Dbxref=Genbank:WP_075242308.1;Name=WP_075242308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051939.1;locus_tag=LNP58_RS02845;product=M20 family metallopeptidase;protein_id=WP_075242308.1;transl_table=11 NZ_CP086372.1 RefSeq gene 602153 603210 . - . ID=gene-LNP58_RS02850;Name=LNP58_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02850;old_locus_tag=LNP58_02850 NZ_CP086372.1 Protein Homology CDS 603036 603210 . - 0 ID=cds-WP_155296485.1;Parent=gene-LNP58_RS02850;Dbxref=Genbank:WP_155296485.1;Name=WP_155296485.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS02850;product=IS630 family transposase;protein_id=WP_155296485.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 602153 603036 . - 2 ID=cds-WP_155296485.1;Parent=gene-LNP58_RS02850;Dbxref=Genbank:WP_155296485.1;Name=WP_155296485.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS02850;product=IS630 family transposase;protein_id=WP_155296485.1;transl_table=11 NZ_CP086372.1 RefSeq gene 603435 603707 . + . ID=gene-LNP58_RS02855;Name=LNP58_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02855;old_locus_tag=LNP58_02855 NZ_CP086372.1 Protein Homology CDS 603435 603707 . + 0 ID=cds-WP_011407896.1;Parent=gene-LNP58_RS02855;Dbxref=Genbank:WP_011407896.1;Name=WP_011407896.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157695.1;locus_tag=LNP58_RS02855;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011407896.1;transl_table=11 NZ_CP086372.1 RefSeq gene 603765 604784 . + . ID=gene-LNP58_RS02860;Name=LNP58_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02860;old_locus_tag=LNP58_02860 NZ_CP086372.1 Protein Homology CDS 603765 604784 . + 0 ID=cds-WP_011407895.1;Parent=gene-LNP58_RS02860;Dbxref=Genbank:WP_011407895.1;Name=WP_011407895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116339.1;locus_tag=LNP58_RS02860;product=phosphotransferase;protein_id=WP_011407895.1;transl_table=11 NZ_CP086372.1 RefSeq gene 604781 605491 . + . ID=gene-LNP58_RS02865;Name=LNP58_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02865;old_locus_tag=LNP58_02865 NZ_CP086372.1 Protein Homology CDS 604781 605491 . + 0 ID=cds-WP_011258121.1;Parent=gene-LNP58_RS02865;Dbxref=Genbank:WP_011258121.1;Name=WP_011258121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=LNP58_RS02865;product=nucleotidyltransferase family protein;protein_id=WP_011258121.1;transl_table=11 NZ_CP086372.1 RefSeq gene 605658 606359 . - . ID=gene-LNP58_RS02870;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LNP58_RS02870;old_locus_tag=LNP58_02870 NZ_CP086372.1 Protein Homology CDS 605658 606359 . - 0 ID=cds-WP_014502510.1;Parent=gene-LNP58_RS02870;Dbxref=Genbank:WP_014502510.1;Name=WP_014502510.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=LNP58_RS02870;product=DnaA regulatory inactivator Hda;protein_id=WP_014502510.1;transl_table=11 NZ_CP086372.1 RefSeq gene 606356 607522 . - . ID=gene-LNP58_RS02875;Name=LNP58_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02875;old_locus_tag=LNP58_02875 NZ_CP086372.1 Protein Homology CDS 606356 607522 . - 0 ID=cds-WP_014502509.1;Parent=gene-LNP58_RS02875;Dbxref=Genbank:WP_014502509.1;Name=WP_014502509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157699.1;locus_tag=LNP58_RS02875;product=AI-2E family transporter;protein_id=WP_014502509.1;transl_table=11 NZ_CP086372.1 RefSeq gene 607519 608631 . - . ID=gene-LNP58_RS02880;Name=LNP58_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02880;old_locus_tag=LNP58_02880 NZ_CP086372.1 Protein Homology CDS 607519 608631 . - 0 ID=cds-WP_047339642.1;Parent=gene-LNP58_RS02880;Dbxref=Genbank:WP_047339642.1;Name=WP_047339642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970596.1;locus_tag=LNP58_RS02880;product=DUF2066 domain-containing protein;protein_id=WP_047339642.1;transl_table=11 NZ_CP086372.1 RefSeq gene 608654 609787 . + . ID=gene-LNP58_RS02885;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LNP58_RS02885;old_locus_tag=LNP58_02885 NZ_CP086372.1 Protein Homology CDS 608654 609787 . + 0 ID=cds-WP_178383645.1;Parent=gene-LNP58_RS02885;Dbxref=Genbank:WP_178383645.1;Name=WP_178383645.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850074.1;locus_tag=LNP58_RS02885;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_178383645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 609801 610262 . + . ID=gene-LNP58_RS02890;Name=LNP58_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02890;old_locus_tag=LNP58_02890 NZ_CP086372.1 Protein Homology CDS 609801 610262 . + 0 ID=cds-WP_014502506.1;Parent=gene-LNP58_RS02890;Dbxref=Genbank:WP_014502506.1;Name=WP_014502506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258116.1;locus_tag=LNP58_RS02890;product=hypothetical protein;protein_id=WP_014502506.1;transl_table=11 NZ_CP086372.1 RefSeq gene 610285 610902 . + . ID=gene-LNP58_RS02895;Name=LNP58_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02895;old_locus_tag=LNP58_02895 NZ_CP086372.1 Protein Homology CDS 610285 610902 . + 0 ID=cds-WP_041183138.1;Parent=gene-LNP58_RS02895;Dbxref=Genbank:WP_041183138.1;Name=WP_041183138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157703.1;locus_tag=LNP58_RS02895;product=DUF2238 domain-containing protein;protein_id=WP_041183138.1;transl_table=11 NZ_CP086372.1 RefSeq gene 610889 611557 . + . ID=gene-LNP58_RS02900;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LNP58_RS02900;old_locus_tag=LNP58_02900 NZ_CP086372.1 Protein Homology CDS 610889 611557 . + 0 ID=cds-WP_014502504.1;Parent=gene-LNP58_RS02900;Dbxref=Genbank:WP_014502504.1;Name=WP_014502504.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258114.1;locus_tag=LNP58_RS02900;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_014502504.1;transl_table=11 NZ_CP086372.1 RefSeq gene 611623 612450 . + . ID=gene-LNP58_RS02905;Name=LNP58_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02905;old_locus_tag=LNP58_02905 NZ_CP086372.1 Protein Homology CDS 611623 612450 . + 0 ID=cds-WP_014502503.1;Parent=gene-LNP58_RS02905;Dbxref=Genbank:WP_014502503.1;Name=WP_014502503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158355.1;locus_tag=LNP58_RS02905;product=DUF3108 domain-containing protein;protein_id=WP_014502503.1;transl_table=11 NZ_CP086372.1 RefSeq gene 612454 613134 . + . ID=gene-LNP58_RS02910;Name=LNP58_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02910;old_locus_tag=LNP58_02910 NZ_CP086372.1 Protein Homology CDS 612454 613134 . + 0 ID=cds-WP_048483151.1;Parent=gene-LNP58_RS02910;Dbxref=Genbank:WP_048483151.1;Name=WP_048483151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502502.1;locus_tag=LNP58_RS02910;product=DUF3108 domain-containing protein;protein_id=WP_048483151.1;transl_table=11 NZ_CP086372.1 RefSeq gene 613602 614837 . - . ID=gene-LNP58_RS02915;Name=LNP58_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02915;old_locus_tag=LNP58_02915 NZ_CP086372.1 Protein Homology CDS 613602 614837 . - 0 ID=cds-WP_069959761.1;Parent=gene-LNP58_RS02915;Dbxref=Genbank:WP_069959761.1;Name=WP_069959761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS02915;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_069959761.1;transl_table=11 NZ_CP086372.1 RefSeq gene 615545 615868 . - . ID=gene-LNP58_RS02920;Name=LNP58_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02920;old_locus_tag=LNP58_02920 NZ_CP086372.1 Protein Homology CDS 615545 615868 . - 0 ID=cds-WP_011258111.1;Parent=gene-LNP58_RS02920;Dbxref=Genbank:WP_011258111.1;Name=WP_011258111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348142.1;locus_tag=LNP58_RS02920;product=hypothetical protein;protein_id=WP_011258111.1;transl_table=11 NZ_CP086372.1 RefSeq gene 615865 617139 . - . ID=gene-LNP58_RS02925;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LNP58_RS02925;old_locus_tag=LNP58_02925 NZ_CP086372.1 Protein Homology CDS 615865 617139 . - 0 ID=cds-WP_011258110.1;Parent=gene-LNP58_RS02925;Dbxref=Genbank:WP_011258110.1;Name=WP_011258110.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437778.1;locus_tag=LNP58_RS02925;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_011258110.1;transl_table=11 NZ_CP086372.1 RefSeq gene 617378 617605 . - . ID=gene-LNP58_RS02930;Name=LNP58_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02930;old_locus_tag=LNP58_02930 NZ_CP086372.1 Protein Homology CDS 617378 617605 . - 0 ID=cds-WP_011258109.1;Parent=gene-LNP58_RS02930;Dbxref=Genbank:WP_011258109.1;Name=WP_011258109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905061.1;locus_tag=LNP58_RS02930;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_011258109.1;transl_table=11 NZ_CP086372.1 RefSeq gene 617660 618661 . + . ID=gene-LNP58_RS02935;Name=LNP58_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02935;old_locus_tag=LNP58_02935 NZ_CP086372.1 Protein Homology CDS 617660 618661 . + 0 ID=cds-WP_011258108.1;Parent=gene-LNP58_RS02935;Dbxref=Genbank:WP_011258108.1;Name=WP_011258108.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993233.1;locus_tag=LNP58_RS02935;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_011258108.1;transl_table=11 NZ_CP086372.1 RefSeq gene 618710 619258 . + . ID=gene-LNP58_RS02940;Name=LNP58_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02940;old_locus_tag=LNP58_02940 NZ_CP086372.1 Protein Homology CDS 618710 619258 . + 0 ID=cds-WP_011407889.1;Parent=gene-LNP58_RS02940;Dbxref=Genbank:WP_011407889.1;Name=WP_011407889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407889.1;locus_tag=LNP58_RS02940;product=HAD hydrolase family protein;protein_id=WP_011407889.1;transl_table=11 NZ_CP086372.1 RefSeq gene 619255 619830 . + . ID=gene-LNP58_RS02945;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LNP58_RS02945;old_locus_tag=LNP58_02945 NZ_CP086372.1 Protein Homology CDS 619255 619830 . + 0 ID=cds-WP_011258106.1;Parent=gene-LNP58_RS02945;Dbxref=Genbank:WP_011258106.1;Name=WP_011258106.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301638.1;locus_tag=LNP58_RS02945;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011258106.1;transl_table=11 NZ_CP086372.1 RefSeq gene 619808 620356 . + . ID=gene-LNP58_RS02950;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LNP58_RS02950;old_locus_tag=LNP58_02950 NZ_CP086372.1 Protein Homology CDS 619808 620356 . + 0 ID=cds-WP_011258105.1;Parent=gene-LNP58_RS02950;Dbxref=Genbank:WP_011258105.1;Name=WP_011258105.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090696.1;locus_tag=LNP58_RS02950;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_011258105.1;transl_table=11 NZ_CP086372.1 RefSeq gene 620356 621075 . + . ID=gene-LNP58_RS02955;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LNP58_RS02955;old_locus_tag=LNP58_02955 NZ_CP086372.1 Protein Homology CDS 620356 621075 . + 0 ID=cds-WP_011258104.1;Parent=gene-LNP58_RS02955;Dbxref=Genbank:WP_011258104.1;Name=WP_011258104.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913374.1;locus_tag=LNP58_RS02955;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_011258104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 621158 622555 . + . ID=gene-LNP58_RS02960;Name=LNP58_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02960;old_locus_tag=LNP58_02960 NZ_CP086372.1 Protein Homology CDS 621158 622555 . + 0 ID=cds-WP_012445785.1;Parent=gene-LNP58_RS02960;Dbxref=Genbank:WP_012445785.1;Name=WP_012445785.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161722.1;locus_tag=LNP58_RS02960;product=RNA polymerase factor sigma-54;protein_id=WP_012445785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 622643 622960 . + . ID=gene-LNP58_RS02965;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LNP58_RS02965;old_locus_tag=LNP58_02965 NZ_CP086372.1 Protein Homology CDS 622643 622960 . + 0 ID=cds-WP_011258102.1;Parent=gene-LNP58_RS02965;Dbxref=Genbank:WP_011258102.1;Name=WP_011258102.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913379.1;locus_tag=LNP58_RS02965;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_011258102.1;transl_table=11 NZ_CP086372.1 RefSeq gene 622982 623440 . + . ID=gene-LNP58_RS02970;Name=LNP58_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02970;old_locus_tag=LNP58_02970 NZ_CP086372.1 Protein Homology CDS 622982 623440 . + 0 ID=cds-WP_011407887.1;Parent=gene-LNP58_RS02970;Dbxref=Genbank:WP_011407887.1;Name=WP_011407887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944116.1;locus_tag=LNP58_RS02970;product=PTS sugar transporter subunit IIA;protein_id=WP_011407887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 623437 624387 . + . ID=gene-LNP58_RS02975;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LNP58_RS02975;old_locus_tag=LNP58_02975 NZ_CP086372.1 Protein Homology CDS 623437 624387 . + 0 ID=cds-WP_011258100.1;Parent=gene-LNP58_RS02975;Dbxref=Genbank:WP_011258100.1;Name=WP_011258100.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425835.1;locus_tag=LNP58_RS02975;product=HPr(Ser) kinase/phosphatase;protein_id=WP_011258100.1;transl_table=11 NZ_CP086372.1 RefSeq gene 624384 625256 . + . ID=gene-LNP58_RS02980;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LNP58_RS02980;old_locus_tag=LNP58_02980 NZ_CP086372.1 Protein Homology CDS 624384 625256 . + 0 ID=cds-WP_011258099.1;Parent=gene-LNP58_RS02980;Dbxref=Genbank:WP_011258099.1;Name=WP_011258099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993216.1;locus_tag=LNP58_RS02980;product=RNase adapter RapZ;protein_id=WP_011258099.1;transl_table=11 NZ_CP086372.1 RefSeq gene 625783 626175 . + . ID=gene-LNP58_RS02985;Name=LNP58_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02985;old_locus_tag=LNP58_02985 NZ_CP086372.1 Protein Homology CDS 625783 626175 . + 0 ID=cds-WP_011258098.1;Parent=gene-LNP58_RS02985;Dbxref=Genbank:WP_011258098.1;Name=WP_011258098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=LNP58_RS02985;product=hypothetical protein;protein_id=WP_011258098.1;transl_table=11 NZ_CP086372.1 RefSeq gene 626168 626437 . + . ID=gene-LNP58_RS02990;Name=LNP58_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS02990;old_locus_tag=LNP58_02990 NZ_CP086372.1 Protein Homology CDS 626168 626437 . + 0 ID=cds-WP_005913389.1;Parent=gene-LNP58_RS02990;Dbxref=Genbank:WP_005913389.1;Name=WP_005913389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237443.1;locus_tag=LNP58_RS02990;product=HPr family phosphocarrier protein;protein_id=WP_005913389.1;transl_table=11 NZ_CP086372.1 RefSeq gene 626496 628226 . + . ID=gene-LNP58_RS02995;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LNP58_RS02995;old_locus_tag=LNP58_02995 NZ_CP086372.1 Protein Homology CDS 626496 628226 . + 0 ID=cds-WP_012445788.1;Parent=gene-LNP58_RS02995;Dbxref=Genbank:WP_012445788.1;Name=WP_012445788.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154796.1;locus_tag=LNP58_RS02995;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_012445788.1;transl_table=11 NZ_CP086372.1 RefSeq gene 628514 629875 . + . ID=gene-LNP58_RS03000;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LNP58_RS03000;old_locus_tag=LNP58_03000 NZ_CP086372.1 Protein Homology CDS 628514 629875 . + 0 ID=cds-WP_011258096.1;Parent=gene-LNP58_RS03000;Dbxref=Genbank:WP_011258096.1;Name=WP_011258096.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502484.1;locus_tag=LNP58_RS03000;product=magnesium transporter;protein_id=WP_011258096.1;transl_table=11 NZ_CP086372.1 RefSeq gene 630092 630829 . + . ID=gene-LNP58_RS03005;Name=LNP58_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03005;old_locus_tag=LNP58_03005 NZ_CP086372.1 Protein Homology CDS 630092 630829 . + 0 ID=cds-WP_012445791.1;Parent=gene-LNP58_RS03005;Dbxref=Genbank:WP_012445791.1;Name=WP_012445791.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302425.1;locus_tag=LNP58_RS03005;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_012445791.1;transl_table=11 NZ_CP086372.1 RefSeq gene 630890 631906 . - . ID=gene-LNP58_RS03010;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LNP58_RS03010;old_locus_tag=LNP58_03010 NZ_CP086372.1 Protein Homology CDS 630890 631906 . - 0 ID=cds-WP_069963918.1;Parent=gene-LNP58_RS03010;Dbxref=Genbank:WP_069963918.1;Name=WP_069963918.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051953.1;locus_tag=LNP58_RS03010;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_069963918.1;transl_table=11 NZ_CP086372.1 RefSeq gene 631906 633306 . - . ID=gene-LNP58_RS03015;Name=LNP58_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03015;old_locus_tag=LNP58_03015 NZ_CP086372.1 Protein Homology CDS 631906 633306 . - 0 ID=cds-WP_069963835.1;Parent=gene-LNP58_RS03015;Dbxref=Genbank:WP_069963835.1;Name=WP_069963835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237439.1;locus_tag=LNP58_RS03015;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_069963835.1;transl_table=11 NZ_CP086372.1 RefSeq gene 633693 634928 . + . ID=gene-LNP58_RS03020;Name=LNP58_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03020;old_locus_tag=LNP58_03020 NZ_CP086372.1 Protein Homology CDS 633693 634928 . + 0 ID=cds-WP_069959761.1-2;Parent=gene-LNP58_RS03020;Dbxref=Genbank:WP_069959761.1;Name=WP_069959761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS03020;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_069959761.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 634943 635068 . - . ID=gene-LNP58_RS03025;Name=LNP58_RS03025;end_range=635068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03025;old_locus_tag=LNP58_03025;partial=true;pseudo=true;start_range=.,634943 NZ_CP086372.1 Protein Homology CDS 634943 635068 . - 0 ID=cds-LNP58_RS03025;Parent=gene-LNP58_RS03025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=635068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158987.1;locus_tag=LNP58_RS03025;partial=true;product=peptidase;pseudo=true;start_range=.,634943;transl_table=11 NZ_CP086372.1 RefSeq gene 635350 636738 . - . ID=gene-LNP58_RS03030;Name=LNP58_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03030;old_locus_tag=LNP58_03030 NZ_CP086372.1 Protein Homology CDS 635350 636738 . - 0 ID=cds-WP_011258091.1;Parent=gene-LNP58_RS03030;Dbxref=Genbank:WP_011258091.1;Name=WP_011258091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003491164.1;locus_tag=LNP58_RS03030;product=amino acid permease;protein_id=WP_011258091.1;transl_table=11 NZ_CP086372.1 RefSeq gene 636834 636909 . - . ID=gene-LNP58_RS03035;Name=LNP58_RS03035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03035;old_locus_tag=LNP58_03035 NZ_CP086372.1 cmsearch ncRNA 636834 636909 . - . ID=rna-LNP58_RS03035;Parent=gene-LNP58_RS03035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03035;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 636834 636909 . - . ID=exon-LNP58_RS03035-1;Parent=rna-LNP58_RS03035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03035;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 637494 638435 . - . ID=gene-LNP58_RS03040;Name=LNP58_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03040;old_locus_tag=LNP58_03040 NZ_CP086372.1 Protein Homology CDS 637494 638435 . - 0 ID=cds-WP_044750723.1;Parent=gene-LNP58_RS03040;Dbxref=Genbank:WP_044750723.1;Name=WP_044750723.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437774.1;locus_tag=LNP58_RS03040;product=proline iminopeptidase-family hydrolase;protein_id=WP_044750723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 638749 639513 . - . ID=gene-LNP58_RS03045;Name=LNP58_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03045;old_locus_tag=LNP58_03045 NZ_CP086372.1 Protein Homology CDS 638749 639513 . - 0 ID=cds-WP_024710940.1;Parent=gene-LNP58_RS03045;Dbxref=Genbank:WP_024710940.1;Name=WP_024710940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964311.1;locus_tag=LNP58_RS03045;product=LuxR family transcriptional regulator;protein_id=WP_024710940.1;transl_table=11 NZ_CP086372.1 RefSeq gene 639706 641088 . + . ID=gene-LNP58_RS03050;Name=LNP58_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03050;old_locus_tag=LNP58_03050 NZ_CP086372.1 Protein Homology CDS 639706 641088 . + 0 ID=cds-WP_014502476.1;Parent=gene-LNP58_RS03050;Dbxref=Genbank:WP_014502476.1;Name=WP_014502476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157822.1;locus_tag=LNP58_RS03050;product=APC family permease;protein_id=WP_014502476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 641543 642940 . + . ID=gene-LNP58_RS03055;Name=LNP58_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03055;old_locus_tag=LNP58_03055 NZ_CP086372.1 Protein Homology CDS 641543 642940 . + 0 ID=cds-WP_011407879.1;Parent=gene-LNP58_RS03055;Dbxref=Genbank:WP_011407879.1;Name=WP_011407879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489555.1;locus_tag=LNP58_RS03055;product=trypsin-like peptidase domain-containing protein;protein_id=WP_011407879.1;transl_table=11 NZ_CP086372.1 RefSeq gene 643503 643901 . + . ID=gene-LNP58_RS03060;Name=LNP58_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03060;old_locus_tag=LNP58_03060 NZ_CP086372.1 Protein Homology CDS 643503 643901 . + 0 ID=cds-WP_011407877.1;Parent=gene-LNP58_RS03060;Dbxref=Genbank:WP_011407877.1;Name=WP_011407877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165040.1;locus_tag=LNP58_RS03060;product=hypothetical protein;protein_id=WP_011407877.1;transl_table=11 NZ_CP086372.1 RefSeq gene 644046 645050 . + . ID=gene-LNP58_RS03065;Name=LNP58_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03065;old_locus_tag=LNP58_03065 NZ_CP086372.1 Protein Homology CDS 644046 645050 . + 0 ID=cds-WP_011258085.1;Parent=gene-LNP58_RS03065;Dbxref=Genbank:WP_011258085.1;Name=WP_011258085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116322.1;locus_tag=LNP58_RS03065;product=MBL fold metallo-hydrolase;protein_id=WP_011258085.1;transl_table=11 NZ_CP086372.1 RefSeq gene 645088 646605 . - . ID=gene-LNP58_RS03070;Name=LNP58_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03070;old_locus_tag=LNP58_03070 NZ_CP086372.1 Protein Homology CDS 645088 646605 . - 0 ID=cds-WP_011258084.1;Parent=gene-LNP58_RS03070;Dbxref=Genbank:WP_011258084.1;Name=WP_011258084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173993.1;locus_tag=LNP58_RS03070;product=tryptophan 7-halogenase;protein_id=WP_011258084.1;transl_table=11 NZ_CP086372.1 RefSeq gene 646646 647692 . - . ID=gene-LNP58_RS03075;Name=LNP58_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03075;old_locus_tag=LNP58_03075 NZ_CP086372.1 Protein Homology CDS 646646 647692 . - 0 ID=cds-WP_011407876.1;Parent=gene-LNP58_RS03075;Dbxref=Genbank:WP_011407876.1;Name=WP_011407876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445799.1;locus_tag=LNP58_RS03075;product=cupin-like domain-containing protein;protein_id=WP_011407876.1;transl_table=11 NZ_CP086372.1 RefSeq gene 647703 648455 . - . ID=gene-LNP58_RS03080;Name=LNP58_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03080;old_locus_tag=LNP58_03080 NZ_CP086372.1 Protein Homology CDS 647703 648455 . - 0 ID=cds-WP_011407875.1;Parent=gene-LNP58_RS03080;Dbxref=Genbank:WP_011407875.1;Name=WP_011407875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381156.1;locus_tag=LNP58_RS03080;product=SapC family protein;protein_id=WP_011407875.1;transl_table=11 NZ_CP086372.1 RefSeq gene 648787 651945 . - . ID=gene-LNP58_RS03085;Name=LNP58_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03085;old_locus_tag=LNP58_03085 NZ_CP086372.1 Protein Homology CDS 648787 651945 . - 0 ID=cds-WP_011407874.1;Parent=gene-LNP58_RS03085;Dbxref=Genbank:WP_011407874.1;Name=WP_011407874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489548.1;locus_tag=LNP58_RS03085;product=TonB-dependent receptor;protein_id=WP_011407874.1;transl_table=11 NZ_CP086372.1 RefSeq gene 652992 654998 . - . ID=gene-LNP58_RS03090;Name=LNP58_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03090;old_locus_tag=LNP58_03090 NZ_CP086372.1 Protein Homology CDS 652992 654998 . - 0 ID=cds-WP_075242228.1;Parent=gene-LNP58_RS03090;Dbxref=Genbank:WP_075242228.1;Name=WP_075242228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851403.1;locus_tag=LNP58_RS03090;product=M1 family metallopeptidase;protein_id=WP_075242228.1;transl_table=11 NZ_CP086372.1 RefSeq gene 655218 655664 . - . ID=gene-LNP58_RS03095;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=LNP58_RS03095;old_locus_tag=LNP58_03095 NZ_CP086372.1 Protein Homology CDS 655218 655664 . - 0 ID=cds-WP_075242229.1;Parent=gene-LNP58_RS03095;Dbxref=Genbank:WP_075242229.1;Name=WP_075242229.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965644.1;locus_tag=LNP58_RS03095;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_075242229.1;transl_table=11 NZ_CP086372.1 RefSeq gene 655680 656000 . - . ID=gene-LNP58_RS03100;Name=LNP58_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03100;old_locus_tag=LNP58_03100 NZ_CP086372.1 GeneMarkS-2+ CDS 655680 656000 . - 0 ID=cds-WP_027703607.1;Parent=gene-LNP58_RS03100;Dbxref=Genbank:WP_027703607.1;Name=WP_027703607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03100;product=hypothetical protein;protein_id=WP_027703607.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 655915 657165 . + . ID=gene-LNP58_RS03105;Name=LNP58_RS03105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03105;old_locus_tag=LNP58_03105;pseudo=true NZ_CP086372.1 Protein Homology CDS 655915 657165 . + 0 ID=cds-LNP58_RS03105;Parent=gene-LNP58_RS03105;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269592.1;locus_tag=LNP58_RS03105;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 657632 658798 . - . ID=gene-LNP58_RS03110;Name=LNP58_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03110;old_locus_tag=LNP58_03110 NZ_CP086372.1 Protein Homology CDS 657632 658798 . - 0 ID=cds-WP_011258077.1;Parent=gene-LNP58_RS03110;Dbxref=Genbank:WP_011258077.1;Name=WP_011258077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171699.1;locus_tag=LNP58_RS03110;product=glutathionylspermidine synthase family protein;protein_id=WP_011258077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 658800 659372 . - . ID=gene-LNP58_RS03115;Name=LNP58_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03115;old_locus_tag=LNP58_03115 NZ_CP086372.1 Protein Homology CDS 658800 659372 . - 0 ID=cds-WP_075242230.1;Parent=gene-LNP58_RS03115;Dbxref=Genbank:WP_075242230.1;Name=WP_075242230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965639.1;locus_tag=LNP58_RS03115;product=DUF1190 domain-containing protein;protein_id=WP_075242230.1;transl_table=11 NZ_CP086372.1 RefSeq gene 659385 659789 . - . ID=gene-LNP58_RS03120;Name=LNP58_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03120;old_locus_tag=LNP58_03120 NZ_CP086372.1 Protein Homology CDS 659385 659789 . - 0 ID=cds-WP_011407869.1;Parent=gene-LNP58_RS03120;Dbxref=Genbank:WP_011407869.1;Name=WP_011407869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807970.1;locus_tag=LNP58_RS03120;product=DUF350 domain-containing protein;protein_id=WP_011407869.1;transl_table=11 NZ_CP086372.1 RefSeq gene 659827 660504 . - . ID=gene-LNP58_RS03125;Name=LNP58_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03125;old_locus_tag=LNP58_03125 NZ_CP086372.1 Protein Homology CDS 659827 660504 . - 0 ID=cds-WP_027703609.1;Parent=gene-LNP58_RS03125;Dbxref=Genbank:WP_027703609.1;Name=WP_027703609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237428.1;locus_tag=LNP58_RS03125;product=YjfK family protein;protein_id=WP_027703609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 660501 661583 . - . ID=gene-LNP58_RS03130;Name=LNP58_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03130;old_locus_tag=LNP58_03130 NZ_CP086372.1 Protein Homology CDS 660501 661583 . - 0 ID=cds-WP_011258073.1;Parent=gene-LNP58_RS03130;Dbxref=Genbank:WP_011258073.1;Name=WP_011258073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971371.1;locus_tag=LNP58_RS03130;product=ion channel;protein_id=WP_011258073.1;transl_table=11 NZ_CP086372.1 RefSeq gene 661609 662382 . - . ID=gene-LNP58_RS03135;Name=LNP58_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03135;old_locus_tag=LNP58_03135 NZ_CP086372.1 Protein Homology CDS 661609 662382 . - 0 ID=cds-WP_011258072.1;Parent=gene-LNP58_RS03135;Dbxref=Genbank:WP_011258072.1;Name=WP_011258072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302374.1;locus_tag=LNP58_RS03135;product=PspA/IM30 family protein;protein_id=WP_011258072.1;transl_table=11 NZ_CP086372.1 RefSeq gene 662395 662877 . - . ID=gene-LNP58_RS03140;Name=LNP58_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03140;old_locus_tag=LNP58_03140 NZ_CP086372.1 Protein Homology CDS 662395 662877 . - 0 ID=cds-WP_011407866.1;Parent=gene-LNP58_RS03140;Dbxref=Genbank:WP_011407866.1;Name=WP_011407866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157839.1;locus_tag=LNP58_RS03140;product=YjfI family protein;protein_id=WP_011407866.1;transl_table=11 NZ_CP086372.1 RefSeq gene 662992 663591 . - . ID=gene-LNP58_RS03145;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LNP58_RS03145;old_locus_tag=LNP58_03145 NZ_CP086372.1 Protein Homology CDS 662992 663591 . - 0 ID=cds-WP_011258070.1;Parent=gene-LNP58_RS03145;Dbxref=Genbank:WP_011258070.1;Name=WP_011258070.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381128.1;locus_tag=LNP58_RS03145;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_011258070.1;transl_table=11 NZ_CP086372.1 RefSeq gene 663758 664300 . + . ID=gene-LNP58_RS03150;Name=LNP58_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03150;old_locus_tag=LNP58_03150 NZ_CP086372.1 Protein Homology CDS 663758 664300 . + 0 ID=cds-WP_011258069.1;Parent=gene-LNP58_RS03150;Dbxref=Genbank:WP_011258069.1;Name=WP_011258069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917545.1;locus_tag=LNP58_RS03150;product=shikimate kinase;protein_id=WP_011258069.1;transl_table=11 NZ_CP086372.1 RefSeq gene 664297 665409 . + . ID=gene-LNP58_RS03155;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LNP58_RS03155;old_locus_tag=LNP58_03155 NZ_CP086372.1 Protein Homology CDS 664297 665409 . + 0 ID=cds-WP_011258068.1;Parent=gene-LNP58_RS03155;Dbxref=Genbank:WP_011258068.1;Name=WP_011258068.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090724.1;locus_tag=LNP58_RS03155;product=3-dehydroquinate synthase;protein_id=WP_011258068.1;transl_table=11 NZ_CP086372.1 RefSeq gene 665711 665962 . + . ID=gene-LNP58_RS03160;Name=LNP58_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03160;old_locus_tag=LNP58_03160 NZ_CP086372.1 Protein Homology CDS 665711 665962 . + 0 ID=cds-WP_011407864.1;Parent=gene-LNP58_RS03160;Dbxref=Genbank:WP_011407864.1;Name=WP_011407864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407864.1;locus_tag=LNP58_RS03160;product=WGR domain-containing protein;protein_id=WP_011407864.1;transl_table=11 NZ_CP086372.1 RefSeq gene 665977 667041 . + . ID=gene-LNP58_RS03165;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LNP58_RS03165;old_locus_tag=LNP58_03165 NZ_CP086372.1 Protein Homology CDS 665977 667041 . + 0 ID=cds-WP_011258066.1;Parent=gene-LNP58_RS03165;Dbxref=Genbank:WP_011258066.1;Name=WP_011258066.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407863.1;locus_tag=LNP58_RS03165;product=uroporphyrinogen decarboxylase;protein_id=WP_011258066.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 667396 667722 . - . ID=gene-LNP58_RS03170;Name=LNP58_RS03170;end_range=667722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03170;old_locus_tag=LNP58_03170;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 667396 667722 . - 0 ID=cds-LNP58_RS03170;Parent=gene-LNP58_RS03170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=667722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=LNP58_RS03170;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 667731 668381 . - . ID=gene-LNP58_RS03175;Name=LNP58_RS03175;end_range=668381,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03175;old_locus_tag=LNP58_03175;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 667731 668381 . - 0 ID=cds-LNP58_RS03175;Parent=gene-LNP58_RS03175;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=668381,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS03175;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 668513 672229 . + . ID=gene-LNP58_RS03180;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS03180;old_locus_tag=LNP58_03180 NZ_CP086372.1 Protein Homology CDS 668513 672229 . + 0 ID=cds-WP_208151341.1;Parent=gene-LNP58_RS03180;Dbxref=Genbank:WP_208151341.1;Name=WP_208151341.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS03180;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_208151341.1;transl_table=11 NZ_CP086372.1 RefSeq gene 672498 672692 . + . ID=gene-LNP58_RS03185;Name=LNP58_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03185;old_locus_tag=LNP58_03185 NZ_CP086372.1 GeneMarkS-2+ CDS 672498 672692 . + 0 ID=cds-WP_011258059.1;Parent=gene-LNP58_RS03185;Dbxref=Genbank:WP_011258059.1;Name=WP_011258059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03185;product=hypothetical protein;protein_id=WP_011258059.1;transl_table=11 NZ_CP086372.1 RefSeq gene 672696 672995 . + . ID=gene-LNP58_RS03190;Name=LNP58_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03190;old_locus_tag=LNP58_03190 NZ_CP086372.1 Protein Homology CDS 672696 672995 . + 0 ID=cds-WP_011408408.1;Parent=gene-LNP58_RS03190;Dbxref=Genbank:WP_011408408.1;Name=WP_011408408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS03190;product=hypothetical protein;protein_id=WP_011408408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 673219 677643 . + . ID=gene-LNP58_RS03195;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS03195;old_locus_tag=LNP58_03195 NZ_CP086372.1 Protein Homology CDS 673219 677643 . + 0 ID=cds-WP_229001919.1;Parent=gene-LNP58_RS03195;Dbxref=Genbank:WP_229001919.1;Name=WP_229001919.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445810.1;locus_tag=LNP58_RS03195;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_229001919.1;transl_table=11 NZ_CP086372.1 RefSeq gene 677912 678106 . + . ID=gene-LNP58_RS03200;Name=LNP58_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03200;old_locus_tag=LNP58_03200 NZ_CP086372.1 GeneMarkS-2+ CDS 677912 678106 . + 0 ID=cds-WP_228329771.1;Parent=gene-LNP58_RS03200;Dbxref=Genbank:WP_228329771.1;Name=WP_228329771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03200;product=hypothetical protein;protein_id=WP_228329771.1;transl_table=11 NZ_CP086372.1 RefSeq gene 678110 678409 . + . ID=gene-LNP58_RS03205;Name=LNP58_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03205;old_locus_tag=LNP58_03205 NZ_CP086372.1 Protein Homology CDS 678110 678409 . + 0 ID=cds-WP_041182759.1;Parent=gene-LNP58_RS03205;Dbxref=Genbank:WP_041182759.1;Name=WP_041182759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450394.1;locus_tag=LNP58_RS03205;product=hypothetical protein;protein_id=WP_041182759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 678633 681944 . + . ID=gene-LNP58_RS03210;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS03210;old_locus_tag=LNP58_03210 NZ_CP086372.1 Protein Homology CDS 678633 681944 . + 0 ID=cds-WP_069959754.1;Parent=gene-LNP58_RS03210;Dbxref=Genbank:WP_069959754.1;Name=WP_069959754.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS03210;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_069959754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 682213 682407 . + . ID=gene-LNP58_RS03215;Name=LNP58_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03215;old_locus_tag=LNP58_03215 NZ_CP086372.1 GeneMarkS-2+ CDS 682213 682407 . + 0 ID=cds-WP_041182100.1;Parent=gene-LNP58_RS03215;Dbxref=Genbank:WP_041182100.1;Name=WP_041182100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03215;product=hypothetical protein;protein_id=WP_041182100.1;transl_table=11 NZ_CP086372.1 RefSeq gene 682411 682710 . + . ID=gene-LNP58_RS03220;Name=LNP58_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03220;old_locus_tag=LNP58_03220 NZ_CP086372.1 Protein Homology CDS 682411 682710 . + 0 ID=cds-WP_011408491.1;Parent=gene-LNP58_RS03220;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS03220;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 682934 685942 . + . ID=gene-LNP58_RS03225;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS03225;old_locus_tag=LNP58_03225 NZ_CP086372.1 Protein Homology CDS 682934 685942 . + 0 ID=cds-WP_228329694.1;Parent=gene-LNP58_RS03225;Dbxref=Genbank:WP_228329694.1;Name=WP_228329694.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS03225;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329694.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 686037 686945 . + . ID=gene-LNP58_RS03230;Name=LNP58_RS03230;end_range=686945,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03230;old_locus_tag=LNP58_03230;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 686037 686945 . + 0 ID=cds-LNP58_RS03230;Parent=gene-LNP58_RS03230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=686945,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=LNP58_RS03230;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 687039 687896 . + . ID=gene-LNP58_RS03235;Name=LNP58_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03235;old_locus_tag=LNP58_03235 NZ_CP086372.1 Protein Homology CDS 687039 687896 . + 0 ID=cds-WP_228329693.1;Parent=gene-LNP58_RS03235;Dbxref=Genbank:WP_228329693.1;Name=WP_228329693.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258055.1;locus_tag=LNP58_RS03235;product=IS30 family transposase;protein_id=WP_228329693.1;transl_table=11 NZ_CP086372.1 RefSeq gene 688393 691572 . - . ID=gene-LNP58_RS03240;Name=LNP58_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03240;old_locus_tag=LNP58_03240 NZ_CP086372.1 Protein Homology CDS 688393 691572 . - 0 ID=cds-WP_011407854.1;Parent=gene-LNP58_RS03240;Dbxref=Genbank:WP_011407854.1;Name=WP_011407854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169557.1;locus_tag=LNP58_RS03240;product=TonB-dependent receptor;protein_id=WP_011407854.1;transl_table=11 NZ_CP086372.1 RefSeq gene 691858 693147 . + . ID=gene-LNP58_RS03245;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LNP58_RS03245;old_locus_tag=LNP58_03245 NZ_CP086372.1 Protein Homology CDS 691858 693147 . + 0 ID=cds-WP_027703881.1;Parent=gene-LNP58_RS03245;Dbxref=Genbank:WP_027703881.1;Name=WP_027703881.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052264.1;locus_tag=LNP58_RS03245;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_027703881.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 693675 696465 . + . ID=gene-LNP58_RS03250;Name=LNP58_RS03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03250;old_locus_tag=LNP58_03250;pseudo=true NZ_CP086372.1 Protein Homology CDS 693675 696465 . + 0 ID=cds-LNP58_RS03250;Parent=gene-LNP58_RS03250;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851072.1;locus_tag=LNP58_RS03250;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 696544 696993 . - . ID=gene-LNP58_RS03255;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=LNP58_RS03255;old_locus_tag=LNP58_03255 NZ_CP086372.1 Protein Homology CDS 696544 696993 . - 0 ID=cds-WP_011407850.1;Parent=gene-LNP58_RS03255;Dbxref=Genbank:WP_011407850.1;Name=WP_011407850.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851071.1;locus_tag=LNP58_RS03255;product=azurin;protein_id=WP_011407850.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 697205 698405 . - . ID=gene-LNP58_RS03260;Name=LNP58_RS03260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03260;old_locus_tag=LNP58_03260;pseudo=true NZ_CP086372.1 Protein Homology CDS 697205 698405 . - 0 ID=cds-LNP58_RS03260;Parent=gene-LNP58_RS03260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926874.1;locus_tag=LNP58_RS03260;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 698436 698939 . - . ID=gene-LNP58_RS03265;Name=LNP58_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03265;old_locus_tag=LNP58_03265 NZ_CP086372.1 Protein Homology CDS 698436 698939 . - 0 ID=cds-WP_011407846.1;Parent=gene-LNP58_RS03265;Dbxref=Genbank:WP_011407846.1;Name=WP_011407846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348483.1;locus_tag=LNP58_RS03265;product=RidA family protein;protein_id=WP_011407846.1;transl_table=11 NZ_CP086372.1 RefSeq gene 698964 699389 . - . ID=gene-LNP58_RS03270;Name=LNP58_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03270;old_locus_tag=LNP58_03270 NZ_CP086372.1 Protein Homology CDS 698964 699389 . - 0 ID=cds-WP_011258050.1;Parent=gene-LNP58_RS03270;Dbxref=Genbank:WP_011258050.1;Name=WP_011258050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504474.1;locus_tag=LNP58_RS03270;product=cytochrome c;protein_id=WP_011258050.1;transl_table=11 NZ_CP086372.1 RefSeq gene 699386 700993 . - . ID=gene-LNP58_RS03275;Name=LNP58_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03275;old_locus_tag=LNP58_03275 NZ_CP086372.1 Protein Homology CDS 699386 700993 . - 0 ID=cds-WP_042464589.1;Parent=gene-LNP58_RS03275;Dbxref=Genbank:WP_042464589.1;Name=WP_042464589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851068.1;locus_tag=LNP58_RS03275;product=flavin monoamine oxidase family protein;protein_id=WP_042464589.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 701063 701987 . - . ID=gene-LNP58_RS03280;Name=LNP58_RS03280;end_range=701987,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03280;old_locus_tag=LNP58_03280;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 701063 701987 . - 0 ID=cds-LNP58_RS03280;Parent=gene-LNP58_RS03280;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=701987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463573.1;locus_tag=LNP58_RS03280;partial=true;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 702070 702198 . + . ID=gene-LNP58_RS23400;Name=LNP58_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23400 NZ_CP086372.1 GeneMarkS-2+ CDS 702070 702198 . + 0 ID=cds-WP_256364565.1;Parent=gene-LNP58_RS23400;Dbxref=Genbank:WP_256364565.1;Name=WP_256364565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23400;product=hypothetical protein;protein_id=WP_256364565.1;transl_table=11 NZ_CP086372.1 RefSeq gene 702530 703147 . + . ID=gene-LNP58_RS03285;Name=LNP58_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03285;old_locus_tag=LNP58_03285 NZ_CP086372.1 Protein Homology CDS 702530 703147 . + 0 ID=cds-WP_011407842.1;Parent=gene-LNP58_RS03285;Dbxref=Genbank:WP_011407842.1;Name=WP_011407842.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577886.1;locus_tag=LNP58_RS03285;product=HAD-IA family hydrolase;protein_id=WP_011407842.1;transl_table=11 NZ_CP086372.1 RefSeq gene 703392 704618 . - . ID=gene-LNP58_RS03290;Name=LNP58_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03290;old_locus_tag=LNP58_03290 NZ_CP086372.1 Protein Homology CDS 703392 704618 . - 0 ID=cds-WP_011258048.1;Parent=gene-LNP58_RS03290;Dbxref=Genbank:WP_011258048.1;Name=WP_011258048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258048.1;locus_tag=LNP58_RS03290;product=acetylornithine transaminase;protein_id=WP_011258048.1;transl_table=11 NZ_CP086372.1 RefSeq gene 704691 705563 . + . ID=gene-LNP58_RS03295;Name=LNP58_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03295;old_locus_tag=LNP58_03295 NZ_CP086372.1 Protein Homology CDS 704691 705563 . + 0 ID=cds-WP_011258047.1;Parent=gene-LNP58_RS03295;Dbxref=Genbank:WP_011258047.1;Name=WP_011258047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911973.1;locus_tag=LNP58_RS03295;product=ion transporter;protein_id=WP_011258047.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 705807 706604 . - . ID=gene-LNP58_RS03300;Name=LNP58_RS03300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03300;old_locus_tag=LNP58_03300;pseudo=true NZ_CP086372.1 Protein Homology CDS 705807 706604 . - 0 ID=cds-LNP58_RS03300;Parent=gene-LNP58_RS03300;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024293.2;locus_tag=LNP58_RS03300;product=YiiG family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 706623 706802 . - . ID=gene-LNP58_RS03305;Name=LNP58_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03305;old_locus_tag=LNP58_03305 NZ_CP086372.1 Protein Homology CDS 706623 706802 . - 0 ID=cds-WP_011407841.1;Parent=gene-LNP58_RS03305;Dbxref=Genbank:WP_011407841.1;Name=WP_011407841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301580.1;locus_tag=LNP58_RS03305;product=hypothetical protein;protein_id=WP_011407841.1;transl_table=11 NZ_CP086372.1 RefSeq gene 706824 707622 . - . ID=gene-LNP58_RS03310;Name=LNP58_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03310;old_locus_tag=LNP58_03310 NZ_CP086372.1 Protein Homology CDS 707351 707622 . - 0 ID=cds-WP_094187758.1;Parent=gene-LNP58_RS03310;Dbxref=Genbank:WP_094187758.1;Name=WP_094187758.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03310;product=IS5 family transposase;protein_id=WP_094187758.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 706824 707352 . - 1 ID=cds-WP_094187758.1;Parent=gene-LNP58_RS03310;Dbxref=Genbank:WP_094187758.1;Name=WP_094187758.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03310;product=IS5 family transposase;protein_id=WP_094187758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 707703 708362 . - . ID=gene-LNP58_RS03315;Name=LNP58_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03315;old_locus_tag=LNP58_03315 NZ_CP086372.1 Protein Homology CDS 707703 708362 . - 0 ID=cds-WP_011407839.1;Parent=gene-LNP58_RS03315;Dbxref=Genbank:WP_011407839.1;Name=WP_011407839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303234.1;locus_tag=LNP58_RS03315;product=serine/threonine-protein kinase;protein_id=WP_011407839.1;transl_table=11 NZ_CP086372.1 RefSeq gene 708514 710601 . + . ID=gene-LNP58_RS03320;Name=LNP58_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03320;old_locus_tag=LNP58_03320 NZ_CP086372.1 Protein Homology CDS 708514 710601 . + 0 ID=cds-WP_011407838.1;Parent=gene-LNP58_RS03320;Dbxref=Genbank:WP_011407838.1;Name=WP_011407838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303233.1;locus_tag=LNP58_RS03320;product=bifunctional DedA family/phosphatase PAP2 family protein;protein_id=WP_011407838.1;transl_table=11 NZ_CP086372.1 RefSeq gene 710777 711761 . + . ID=gene-LNP58_RS03325;Name=LNP58_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03325;old_locus_tag=LNP58_03325 NZ_CP086372.1 Protein Homology CDS 710777 711412 . + 0 ID=cds-WP_113081219.1;Parent=gene-LNP58_RS03325;Dbxref=Genbank:WP_113081219.1;Name=WP_113081219.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS03325;product=IS5 family transposase;protein_id=WP_113081219.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 711414 711761 . + 0 ID=cds-WP_113081219.1;Parent=gene-LNP58_RS03325;Dbxref=Genbank:WP_113081219.1;Name=WP_113081219.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS03325;product=IS5 family transposase;protein_id=WP_113081219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 712165 713082 . + . ID=gene-LNP58_RS03330;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=LNP58_RS03330;old_locus_tag=LNP58_03330 NZ_CP086372.1 Protein Homology CDS 712165 713082 . + 0 ID=cds-WP_012445833.1;Parent=gene-LNP58_RS03330;Dbxref=Genbank:WP_012445833.1;Name=WP_012445833.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504335.1;locus_tag=LNP58_RS03330;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_012445833.1;transl_table=11 NZ_CP086372.1 RefSeq gene 713296 713685 . + . ID=gene-LNP58_RS03335;Name=LNP58_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03335;old_locus_tag=LNP58_03335 NZ_CP086372.1 Protein Homology CDS 713296 713685 . + 0 ID=cds-WP_027704066.1;Parent=gene-LNP58_RS03335;Dbxref=Genbank:WP_027704066.1;Name=WP_027704066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116874.1;locus_tag=LNP58_RS03335;product=hypothetical protein;protein_id=WP_027704066.1;transl_table=11 NZ_CP086372.1 RefSeq gene 713765 714442 . + . ID=gene-LNP58_RS03340;Name=LNP58_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03340;old_locus_tag=LNP58_03340 NZ_CP086372.1 Protein Homology CDS 713765 714442 . + 0 ID=cds-WP_011407833.1;Parent=gene-LNP58_RS03340;Dbxref=Genbank:WP_011407833.1;Name=WP_011407833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169438.1;locus_tag=LNP58_RS03340;product=response regulator transcription factor;protein_id=WP_011407833.1;transl_table=11 NZ_CP086372.1 RefSeq gene 714905 716224 . + . ID=gene-LNP58_RS03345;Name=LNP58_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03345;old_locus_tag=LNP58_03345 NZ_CP086372.1 Protein Homology CDS 714905 716224 . + 0 ID=cds-WP_027704076.1;Parent=gene-LNP58_RS03345;Dbxref=Genbank:WP_027704076.1;Name=WP_027704076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237347.1;locus_tag=LNP58_RS03345;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_027704076.1;transl_table=11 NZ_CP086372.1 RefSeq gene 716334 717299 . - . ID=gene-LNP58_RS03350;Name=LNP58_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03350;old_locus_tag=LNP58_03350 NZ_CP086372.1 Protein Homology CDS 716334 717299 . - 0 ID=cds-WP_115801876.1;Parent=gene-LNP58_RS03350;Dbxref=Genbank:WP_115801876.1;Name=WP_115801876.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS03350;product=IS1595-like element ISXo5 family transposase;protein_id=WP_115801876.1;transl_table=11 NZ_CP086372.1 RefSeq gene 717388 718151 . - . ID=gene-LNP58_RS03355;Name=LNP58_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03355;old_locus_tag=LNP58_03355 NZ_CP086372.1 Protein Homology CDS 717836 718151 . - 0 ID=cds-WP_109181945.1;Parent=gene-LNP58_RS03355;Dbxref=Genbank:WP_109181945.1;Name=WP_109181945.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS03355;product=IS5 family transposase;protein_id=WP_109181945.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 717388 717836 . - 2 ID=cds-WP_109181945.1;Parent=gene-LNP58_RS03355;Dbxref=Genbank:WP_109181945.1;Name=WP_109181945.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS03355;product=IS5 family transposase;protein_id=WP_109181945.1;transl_table=11 NZ_CP086372.1 RefSeq gene 718197 718451 . + . ID=gene-LNP58_RS03360;Name=LNP58_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03360;old_locus_tag=LNP58_03360 NZ_CP086372.1 GeneMarkS-2+ CDS 718197 718451 . + 0 ID=cds-WP_228329692.1;Parent=gene-LNP58_RS03360;Dbxref=Genbank:WP_228329692.1;Name=WP_228329692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03360;product=hypothetical protein;protein_id=WP_228329692.1;transl_table=11 NZ_CP086372.1 RefSeq gene 718539 719540 . - . ID=gene-LNP58_RS03365;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LNP58_RS03365;old_locus_tag=LNP58_03365 NZ_CP086372.1 Protein Homology CDS 718539 719540 . - 0 ID=cds-WP_011407830.1;Parent=gene-LNP58_RS03365;Dbxref=Genbank:WP_011407830.1;Name=WP_011407830.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300876.1;locus_tag=LNP58_RS03365;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011407830.1;transl_table=11 NZ_CP086372.1 RefSeq gene 720197 720337 . - . ID=gene-LNP58_RS03370;Name=LNP58_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03370;old_locus_tag=LNP58_03370 NZ_CP086372.1 GeneMarkS-2+ CDS 720197 720337 . - 0 ID=cds-WP_153296750.1;Parent=gene-LNP58_RS03370;Dbxref=Genbank:WP_153296750.1;Name=WP_153296750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03370;product=hypothetical protein;protein_id=WP_153296750.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 720362 720949 . + . ID=gene-LNP58_RS03375;Name=LNP58_RS03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03375;old_locus_tag=LNP58_03375;pseudo=true NZ_CP086372.1 Protein Homology CDS 720362 720949 . + 0 ID=cds-LNP58_RS03375;Parent=gene-LNP58_RS03375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972397.1;locus_tag=LNP58_RS03375;product=OmpW family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 721068 721660 . + . ID=gene-LNP58_RS03380;Name=LNP58_RS03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03380;old_locus_tag=LNP58_03380;pseudo=true NZ_CP086372.1 Protein Homology CDS 721068 721660 . + 0 ID=cds-LNP58_RS03380;Parent=gene-LNP58_RS03380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156909.1;locus_tag=LNP58_RS03380;product=outer membrane beta-barrel protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 721744 723062 . - . ID=gene-LNP58_RS03385;Name=LNP58_RS03385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03385;old_locus_tag=LNP58_03385;pseudo=true NZ_CP086372.1 Protein Homology CDS 721744 723062 . - 0 ID=cds-LNP58_RS03385;Parent=gene-LNP58_RS03385;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS03385;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 723297 724184 . + . ID=gene-LNP58_RS03390;Name=LNP58_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03390;old_locus_tag=LNP58_03390 NZ_CP086372.1 Protein Homology CDS 723297 724184 . + 0 ID=cds-WP_228329735.1;Parent=gene-LNP58_RS03390;Dbxref=Genbank:WP_228329735.1;Name=WP_228329735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169326.1;locus_tag=LNP58_RS03390;product=S1/P1 nuclease;protein_id=WP_228329735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 724198 725028 . + . ID=gene-LNP58_RS03395;Name=LNP58_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03395;old_locus_tag=LNP58_03395 NZ_CP086372.1 Protein Homology CDS 724198 725028 . + 0 ID=cds-WP_011258028.1;Parent=gene-LNP58_RS03395;Dbxref=Genbank:WP_011258028.1;Name=WP_011258028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364600.1;locus_tag=LNP58_RS03395;product=MBL fold metallo-hydrolase;protein_id=WP_011258028.1;transl_table=11 NZ_CP086372.1 RefSeq gene 725099 725875 . + . ID=gene-LNP58_RS03400;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LNP58_RS03400;old_locus_tag=LNP58_03400 NZ_CP086372.1 Protein Homology CDS 725099 725875 . + 0 ID=cds-WP_069959750.1;Parent=gene-LNP58_RS03400;Dbxref=Genbank:WP_069959750.1;Name=WP_069959750.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933035.1;locus_tag=LNP58_RS03400;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_069959750.1;transl_table=11 NZ_CP086372.1 RefSeq gene 725892 726578 . + . ID=gene-LNP58_RS03405;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LNP58_RS03405;old_locus_tag=LNP58_03405 NZ_CP086372.1 Protein Homology CDS 725892 726578 . + 0 ID=cds-WP_027703578.1;Parent=gene-LNP58_RS03405;Dbxref=Genbank:WP_027703578.1;Name=WP_027703578.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116572.1;locus_tag=LNP58_RS03405;product=molybdate ABC transporter permease subunit;protein_id=WP_027703578.1;transl_table=11 NZ_CP086372.1 RefSeq gene 726578 727192 . + . ID=gene-LNP58_RS03410;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=LNP58_RS03410;old_locus_tag=LNP58_03410 NZ_CP086372.1 Protein Homology CDS 726578 727192 . + 0 ID=cds-WP_011407823.1;Parent=gene-LNP58_RS03410;Dbxref=Genbank:WP_011407823.1;Name=WP_011407823.1;Ontology_term=GO:0015689,GO:0005524,GO:0015412,GO:0009898,GO:0055052;gbkey=CDS;gene=modC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038308.1;locus_tag=LNP58_RS03410;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_011407823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 727535 728119 . - . ID=gene-LNP58_RS03415;Name=LNP58_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03415;old_locus_tag=LNP58_03415 NZ_CP086372.1 Protein Homology CDS 727535 728119 . - 0 ID=cds-WP_011407822.1;Parent=gene-LNP58_RS03415;Dbxref=Genbank:WP_011407822.1;Name=WP_011407822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156903.1;locus_tag=LNP58_RS03415;product=hypothetical protein;protein_id=WP_011407822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 728116 729432 . - . ID=gene-LNP58_RS03420;Name=LNP58_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03420;old_locus_tag=LNP58_03420 NZ_CP086372.1 Protein Homology CDS 728116 729432 . - 0 ID=cds-WP_069959749.1;Parent=gene-LNP58_RS03420;Dbxref=Genbank:WP_069959749.1;Name=WP_069959749.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090943.1;locus_tag=LNP58_RS03420;product=TonB family protein;protein_id=WP_069959749.1;transl_table=11 NZ_CP086372.1 RefSeq gene 729422 729787 . - . ID=gene-LNP58_RS03425;Name=LNP58_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03425;old_locus_tag=LNP58_03425 NZ_CP086372.1 Protein Homology CDS 729422 729787 . - 0 ID=cds-WP_011407820.1;Parent=gene-LNP58_RS03425;Dbxref=Genbank:WP_011407820.1;Name=WP_011407820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156901.1;locus_tag=LNP58_RS03425;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=WP_011407820.1;transl_table=11 NZ_CP086372.1 RefSeq gene 729887 731248 . - . ID=gene-LNP58_RS03430;Name=LNP58_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03430;old_locus_tag=LNP58_03430 NZ_CP086372.1 Protein Homology CDS 729887 731248 . - 0 ID=cds-WP_041182938.1;Parent=gene-LNP58_RS03430;Dbxref=Genbank:WP_041182938.1;Name=WP_041182938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258021.1;locus_tag=LNP58_RS03430;product=ATP-binding protein;protein_id=WP_041182938.1;transl_table=11 NZ_CP086372.1 RefSeq gene 731266 731964 . - . ID=gene-LNP58_RS03435;Name=LNP58_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03435;old_locus_tag=LNP58_03435 NZ_CP086372.1 Protein Homology CDS 731266 731964 . - 0 ID=cds-WP_011407818.1;Parent=gene-LNP58_RS03435;Dbxref=Genbank:WP_011407818.1;Name=WP_011407818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407818.1;locus_tag=LNP58_RS03435;product=response regulator transcription factor;protein_id=WP_011407818.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 731994 732650 . - . ID=gene-LNP58_RS03440;Name=LNP58_RS03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03440;old_locus_tag=LNP58_03440;partial=true;pseudo=true;start_range=.,731994 NZ_CP086372.1 Protein Homology CDS 731994 732650 . - 0 ID=cds-LNP58_RS03440;Parent=gene-LNP58_RS03440;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156898.1;locus_tag=LNP58_RS03440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,731994;transl_table=11 NZ_CP086372.1 RefSeq gene 732631 733470 . - . ID=gene-LNP58_RS03445;Name=LNP58_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03445;old_locus_tag=LNP58_03445 NZ_CP086372.1 Protein Homology CDS 732631 733470 . - 0 ID=cds-WP_011407815.1;Parent=gene-LNP58_RS03445;Dbxref=Genbank:WP_011407815.1;Name=WP_011407815.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160090.1;locus_tag=LNP58_RS03445;product=SDR family oxidoreductase;protein_id=WP_011407815.1;transl_table=11 NZ_CP086372.1 RefSeq gene 733470 734144 . - . ID=gene-LNP58_RS03450;Name=LNP58_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03450;old_locus_tag=LNP58_03450 NZ_CP086372.1 Protein Homology CDS 733470 734144 . - 0 ID=cds-WP_011407814.1;Parent=gene-LNP58_RS03450;Dbxref=Genbank:WP_011407814.1;Name=WP_011407814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407814.1;locus_tag=LNP58_RS03450;product=iron-containing redox enzyme family protein;protein_id=WP_011407814.1;transl_table=11 NZ_CP086372.1 RefSeq gene 734141 735640 . - . ID=gene-LNP58_RS03455;Name=LNP58_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03455;old_locus_tag=LNP58_03455 NZ_CP086372.1 Protein Homology CDS 734141 735640 . - 0 ID=cds-WP_011407813.1;Parent=gene-LNP58_RS03455;Dbxref=Genbank:WP_011407813.1;Name=WP_011407813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156895.1;locus_tag=LNP58_RS03455;product=AMP-binding protein;protein_id=WP_011407813.1;transl_table=11 NZ_CP086372.1 RefSeq gene 735637 736284 . - . ID=gene-LNP58_RS03460;Name=LNP58_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03460;old_locus_tag=LNP58_03460 NZ_CP086372.1 Protein Homology CDS 735637 736284 . - 0 ID=cds-WP_069960293.1;Parent=gene-LNP58_RS03460;Dbxref=Genbank:WP_069960293.1;Name=WP_069960293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156894.1;locus_tag=LNP58_RS03460;product=thermostable hemolysin;protein_id=WP_069960293.1;transl_table=11 NZ_CP086372.1 RefSeq gene 736460 738418 . + . ID=gene-LNP58_RS03465;Name=LNP58_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03465;old_locus_tag=LNP58_03465 NZ_CP086372.1 Protein Homology CDS 736460 738418 . + 0 ID=cds-WP_042464577.1;Parent=gene-LNP58_RS03465;Dbxref=Genbank:WP_042464577.1;Name=WP_042464577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504414.1;locus_tag=LNP58_RS03465;product=acetyl-CoA hydrolase;protein_id=WP_042464577.1;transl_table=11 NZ_CP086372.1 RefSeq gene 738553 739728 . + . ID=gene-LNP58_RS03470;Name=LNP58_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03470;old_locus_tag=LNP58_03470 NZ_CP086372.1 Protein Homology CDS 738553 739728 . + 0 ID=cds-WP_011407810.1;Parent=gene-LNP58_RS03470;Dbxref=Genbank:WP_011407810.1;Name=WP_011407810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348442.1;locus_tag=LNP58_RS03470;product=phosphatidylinositol-specific phospholipase C1-like protein;protein_id=WP_011407810.1;transl_table=11 NZ_CP086372.1 RefSeq gene 739848 742562 . + . ID=gene-LNP58_RS03475;Name=LNP58_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03475;old_locus_tag=LNP58_03475 NZ_CP086372.1 Protein Homology CDS 739848 742562 . + 0 ID=cds-WP_042464574.1;Parent=gene-LNP58_RS03475;Dbxref=Genbank:WP_042464574.1;Name=WP_042464574.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377055.1;locus_tag=LNP58_RS03475;product=TonB-dependent receptor;protein_id=WP_042464574.1;transl_table=11 NZ_CP086372.1 RefSeq gene 742945 743874 . + . ID=gene-LNP58_RS03480;Name=LNP58_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03480;old_locus_tag=LNP58_03480 NZ_CP086372.1 Protein Homology CDS 742945 743874 . + 0 ID=cds-WP_042464572.1;Parent=gene-LNP58_RS03480;Dbxref=Genbank:WP_042464572.1;Name=WP_042464572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156890.1;locus_tag=LNP58_RS03480;product=L%2CD-transpeptidase;protein_id=WP_042464572.1;transl_table=11 NZ_CP086372.1 RefSeq gene 743877 744593 . + . ID=gene-LNP58_RS03485;Name=LNP58_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03485;old_locus_tag=LNP58_03485 NZ_CP086372.1 Protein Homology CDS 743877 744593 . + 0 ID=cds-WP_011258009.1;Parent=gene-LNP58_RS03485;Dbxref=Genbank:WP_011258009.1;Name=WP_011258009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156889.1;locus_tag=LNP58_RS03485;product=M23 family metallopeptidase;protein_id=WP_011258009.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 744775 745185 . - . ID=gene-LNP58_RS03490;Name=LNP58_RS03490;end_range=745185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03490;old_locus_tag=LNP58_03490;partial=true;pseudo=true;start_range=.,744775 NZ_CP086372.1 Protein Homology CDS 744775 745185 . - 0 ID=cds-LNP58_RS03490;Parent=gene-LNP58_RS03490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=745185,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911863.1;locus_tag=LNP58_RS03490;partial=true;product=outer membrane receptor protein;pseudo=true;start_range=.,744775;transl_table=11 NZ_CP086372.1 RefSeq gene 745412 747412 . - . ID=gene-LNP58_RS03495;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LNP58_RS03495;old_locus_tag=LNP58_03495 NZ_CP086372.1 Protein Homology CDS 745412 747412 . - 0 ID=cds-WP_011258007.1;Parent=gene-LNP58_RS03495;Dbxref=Genbank:WP_011258007.1;Name=WP_011258007.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348449.1;locus_tag=LNP58_RS03495;product=transketolase;protein_id=WP_011258007.1;transl_table=11 NZ_CP086372.1 RefSeq gene 747632 748912 . - . ID=gene-LNP58_RS03500;Name=LNP58_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03500;old_locus_tag=LNP58_03500 NZ_CP086372.1 Protein Homology CDS 747632 748912 . - 0 ID=cds-WP_103057328.1;Parent=gene-LNP58_RS03500;Dbxref=Genbank:WP_103057328.1;Name=WP_103057328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472649.1;locus_tag=LNP58_RS03500;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_103057328.1;transl_table=11 NZ_CP086372.1 RefSeq gene 749110 749427 . - . ID=gene-LNP58_RS03505;Name=LNP58_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03505;old_locus_tag=LNP58_03505 NZ_CP086372.1 Protein Homology CDS 749110 749427 . - 0 ID=cds-WP_033013273.1;Parent=gene-LNP58_RS03505;Dbxref=Genbank:WP_033013273.1;Name=WP_033013273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023812.2;locus_tag=LNP58_RS03505;product=DUF3658 domain-containing protein;protein_id=WP_033013273.1;transl_table=11 NZ_CP086372.1 RefSeq gene 749595 749671 . - . ID=gene-LNP58_RS03510;Name=LNP58_RS03510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03510;old_locus_tag=LNP58_03510 NZ_CP086372.1 cmsearch ncRNA 749595 749671 . - . ID=rna-LNP58_RS03510;Parent=gene-LNP58_RS03510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03510;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 749595 749671 . - . ID=exon-LNP58_RS03510-1;Parent=rna-LNP58_RS03510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03510;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 749723 751480 . - . ID=gene-LNP58_RS03515;Name=LNP58_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03515;old_locus_tag=LNP58_03515 NZ_CP086372.1 Protein Homology CDS 749723 751480 . - 0 ID=cds-WP_011407804.1;Parent=gene-LNP58_RS03515;Dbxref=Genbank:WP_011407804.1;Name=WP_011407804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407804.1;locus_tag=LNP58_RS03515;product=BatD family protein;protein_id=WP_011407804.1;transl_table=11 NZ_CP086372.1 RefSeq gene 751477 753279 . - . ID=gene-LNP58_RS03520;Name=LNP58_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03520;old_locus_tag=LNP58_03520 NZ_CP086372.1 Protein Homology CDS 751477 753279 . - 0 ID=cds-WP_069959746.1;Parent=gene-LNP58_RS03520;Dbxref=Genbank:WP_069959746.1;Name=WP_069959746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575858.1;locus_tag=LNP58_RS03520;product=VWA domain-containing protein;protein_id=WP_069959746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 753276 754283 . - . ID=gene-LNP58_RS03525;Name=LNP58_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03525;old_locus_tag=LNP58_03525 NZ_CP086372.1 Protein Homology CDS 753276 754283 . - 0 ID=cds-WP_011407802.1;Parent=gene-LNP58_RS03525;Dbxref=Genbank:WP_011407802.1;Name=WP_011407802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995820.1;locus_tag=LNP58_RS03525;product=VWA domain-containing protein;protein_id=WP_011407802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 754280 754741 . - . ID=gene-LNP58_RS03530;Name=LNP58_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03530;old_locus_tag=LNP58_03530 NZ_CP086372.1 Protein Homology CDS 754280 754741 . - 0 ID=cds-WP_011407801.1;Parent=gene-LNP58_RS03530;Dbxref=Genbank:WP_011407801.1;Name=WP_011407801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486191.1;locus_tag=LNP58_RS03530;product=DUF4381 domain-containing protein;protein_id=WP_011407801.1;transl_table=11 NZ_CP086372.1 RefSeq gene 754744 755706 . - . ID=gene-LNP58_RS03535;Name=LNP58_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03535;old_locus_tag=LNP58_03535 NZ_CP086372.1 Protein Homology CDS 754744 755706 . - 0 ID=cds-WP_069959745.1;Parent=gene-LNP58_RS03535;Dbxref=Genbank:WP_069959745.1;Name=WP_069959745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161784.1;locus_tag=LNP58_RS03535;product=DUF58 domain-containing protein;protein_id=WP_069959745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 755727 756746 . - . ID=gene-LNP58_RS03540;Name=LNP58_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03540;old_locus_tag=LNP58_03540 NZ_CP086372.1 Protein Homology CDS 755727 756746 . - 0 ID=cds-WP_069963832.1;Parent=gene-LNP58_RS03540;Dbxref=Genbank:WP_069963832.1;Name=WP_069963832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166368.1;locus_tag=LNP58_RS03540;product=MoxR family ATPase;protein_id=WP_069963832.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 757068 757343 . + . ID=gene-LNP58_RS03545;Name=LNP58_RS03545;end_range=757343,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03545;old_locus_tag=LNP58_03545;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 757068 757343 . + 0 ID=cds-LNP58_RS03545;Parent=gene-LNP58_RS03545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=757343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS03545;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 757369 758396 . + . ID=gene-LNP58_RS03550;Name=LNP58_RS03550;end_range=758396,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03550;old_locus_tag=LNP58_03550;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 757369 758396 . + 0 ID=cds-LNP58_RS03550;Parent=gene-LNP58_RS03550;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=758396,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409030.1;locus_tag=LNP58_RS03550;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 758474 759709 . - . ID=gene-LNP58_RS03555;Name=LNP58_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03555;old_locus_tag=LNP58_03555 NZ_CP086372.1 Protein Homology CDS 758474 759709 . - 0 ID=cds-WP_011257854.1;Parent=gene-LNP58_RS03555;Dbxref=Genbank:WP_011257854.1;Name=WP_011257854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS03555;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257854.1;transl_table=11 NZ_CP086372.1 RefSeq gene 759852 760650 . + . ID=gene-LNP58_RS03560;Name=LNP58_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03560;old_locus_tag=LNP58_03560 NZ_CP086372.1 Protein Homology CDS 759852 760123 . + 0 ID=cds-WP_228329675.1;Parent=gene-LNP58_RS03560;Dbxref=Genbank:WP_228329675.1;Name=WP_228329675.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03560;product=IS5 family transposase;protein_id=WP_228329675.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 760122 760650 . + 1 ID=cds-WP_228329675.1;Parent=gene-LNP58_RS03560;Dbxref=Genbank:WP_228329675.1;Name=WP_228329675.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03560;product=IS5 family transposase;protein_id=WP_228329675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 760721 762670 . - . ID=gene-LNP58_RS03565;Name=LNP58_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03565;old_locus_tag=LNP58_03565 NZ_CP086372.1 Protein Homology CDS 760721 762670 . - 0 ID=cds-WP_011407796.1;Parent=gene-LNP58_RS03565;Dbxref=Genbank:WP_011407796.1;Name=WP_011407796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038331.1;locus_tag=LNP58_RS03565;product=type IV pilus secretin PilQ family protein;protein_id=WP_011407796.1;transl_table=11 NZ_CP086372.1 RefSeq gene 762690 763223 . - . ID=gene-LNP58_RS03570;Name=LNP58_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03570;old_locus_tag=LNP58_03570 NZ_CP086372.1 Protein Homology CDS 762690 763223 . - 0 ID=cds-WP_011257996.1;Parent=gene-LNP58_RS03570;Dbxref=Genbank:WP_011257996.1;Name=WP_011257996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364547.1;locus_tag=LNP58_RS03570;product=pilus assembly protein PilP;protein_id=WP_011257996.1;transl_table=11 NZ_CP086372.1 RefSeq gene 763220 763885 . - . ID=gene-LNP58_RS03575;Name=LNP58_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03575;old_locus_tag=LNP58_03575 NZ_CP086372.1 Protein Homology CDS 763220 763885 . - 0 ID=cds-WP_011257995.1;Parent=gene-LNP58_RS03575;Dbxref=Genbank:WP_011257995.1;Name=WP_011257995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903585.1;locus_tag=LNP58_RS03575;product=type 4a pilus biogenesis protein PilO;protein_id=WP_011257995.1;transl_table=11 NZ_CP086372.1 RefSeq gene 763882 764640 . - . ID=gene-LNP58_RS03580;Name=LNP58_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03580;old_locus_tag=LNP58_03580 NZ_CP086372.1 Protein Homology CDS 763882 764640 . - 0 ID=cds-WP_011257994.1;Parent=gene-LNP58_RS03580;Dbxref=Genbank:WP_011257994.1;Name=WP_011257994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911890.1;locus_tag=LNP58_RS03580;product=PilN domain-containing protein;protein_id=WP_011257994.1;transl_table=11 NZ_CP086372.1 RefSeq gene 764640 765722 . - . ID=gene-LNP58_RS03585;Name=LNP58_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03585;old_locus_tag=LNP58_03585 NZ_CP086372.1 Protein Homology CDS 764640 765722 . - 0 ID=cds-WP_027703769.1;Parent=gene-LNP58_RS03585;Dbxref=Genbank:WP_027703769.1;Name=WP_027703769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974443.1;locus_tag=LNP58_RS03585;product=pilus assembly protein PilM;protein_id=WP_027703769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 765914 768343 . + . ID=gene-LNP58_RS03590;Name=LNP58_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03590;old_locus_tag=LNP58_03590 NZ_CP086372.1 Protein Homology CDS 765914 768343 . + 0 ID=cds-WP_011257992.1;Parent=gene-LNP58_RS03590;Dbxref=Genbank:WP_011257992.1;Name=WP_011257992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812411.1;locus_tag=LNP58_RS03590;product=penicillin-binding protein 1A;protein_id=WP_011257992.1;transl_table=11 NZ_CP086372.1 RefSeq gene 768653 769303 . + . ID=gene-LNP58_RS03595;Name=LNP58_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03595;old_locus_tag=LNP58_03595 NZ_CP086372.1 Protein Homology CDS 768653 769303 . + 0 ID=cds-WP_011407794.1;Parent=gene-LNP58_RS03595;Dbxref=Genbank:WP_011407794.1;Name=WP_011407794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407794.1;locus_tag=LNP58_RS03595;product=hypothetical protein;protein_id=WP_011407794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 769669 770988 . + . ID=gene-LNP58_RS03600;Name=LNP58_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03600;old_locus_tag=LNP58_03600 NZ_CP086372.1 Protein Homology CDS 769669 770988 . + 0 ID=cds-WP_115801874.1;Parent=gene-LNP58_RS03600;Dbxref=Genbank:WP_115801874.1;Name=WP_115801874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS03600;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801874.1;transl_table=11 NZ_CP086372.1 RefSeq gene 771157 772446 . - . ID=gene-LNP58_RS03605;Name=LNP58_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03605;old_locus_tag=LNP58_03605 NZ_CP086372.1 Protein Homology CDS 771157 772446 . - 0 ID=cds-WP_011407793.1;Parent=gene-LNP58_RS03605;Dbxref=Genbank:WP_011407793.1;Name=WP_011407793.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156870.1;locus_tag=LNP58_RS03605;product=citrate synthase;protein_id=WP_011407793.1;transl_table=11 NZ_CP086372.1 RefSeq gene 772660 772902 . - . ID=gene-LNP58_RS03610;Name=LNP58_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03610;old_locus_tag=LNP58_03610 NZ_CP086372.1 Protein Homology CDS 772660 772902 . - 0 ID=cds-WP_005911911.1;Parent=gene-LNP58_RS03610;Dbxref=Genbank:WP_005911911.1;Name=WP_005911911.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156869.1;locus_tag=LNP58_RS03610;product=type B 50S ribosomal protein L31;protein_id=WP_005911911.1;transl_table=11 NZ_CP086372.1 RefSeq gene 772974 773912 . - . ID=gene-LNP58_RS03615;Name=LNP58_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03615;old_locus_tag=LNP58_03615 NZ_CP086372.1 Protein Homology CDS 772974 773912 . - 0 ID=cds-WP_069959742.1;Parent=gene-LNP58_RS03615;Dbxref=Genbank:WP_069959742.1;Name=WP_069959742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169423.1;locus_tag=LNP58_RS03615;product=nucleoside hydrolase;protein_id=WP_069959742.1;transl_table=11 NZ_CP086372.1 RefSeq gene 774038 776191 . - . ID=gene-LNP58_RS03620;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LNP58_RS03620;old_locus_tag=LNP58_03620 NZ_CP086372.1 Protein Homology CDS 774038 776191 . - 0 ID=cds-WP_069960167.1;Parent=gene-LNP58_RS03620;Dbxref=Genbank:WP_069960167.1;Name=WP_069960167.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161420.1;locus_tag=LNP58_RS03620;product=ATP-dependent DNA helicase RecG;protein_id=WP_069960167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 776212 776592 . - . ID=gene-LNP58_RS03625;Name=LNP58_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03625;old_locus_tag=LNP58_03625 NZ_CP086372.1 Protein Homology CDS 776212 776592 . - 0 ID=cds-WP_011257987.1;Parent=gene-LNP58_RS03625;Dbxref=Genbank:WP_011257987.1;Name=WP_011257987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486159.1;locus_tag=LNP58_RS03625;product=RidA family protein;protein_id=WP_011257987.1;transl_table=11 NZ_CP086372.1 RefSeq gene 776672 778843 . - . ID=gene-LNP58_RS03630;Name=LNP58_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03630;old_locus_tag=LNP58_03630 NZ_CP086372.1 Protein Homology CDS 776672 778843 . - 0 ID=cds-WP_011257986.1;Parent=gene-LNP58_RS03630;Dbxref=Genbank:WP_011257986.1;Name=WP_011257986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269543.1;locus_tag=LNP58_RS03630;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_011257986.1;transl_table=11 NZ_CP086372.1 RefSeq gene 778972 779271 . - . ID=gene-LNP58_RS03635;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LNP58_RS03635;old_locus_tag=LNP58_03635 NZ_CP086372.1 Protein Homology CDS 778972 779271 . - 0 ID=cds-WP_011407791.1;Parent=gene-LNP58_RS03635;Dbxref=Genbank:WP_011407791.1;Name=WP_011407791.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=LNP58_RS03635;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_011407791.1;transl_table=11 NZ_CP086372.1 RefSeq gene 779419 780217 . - . ID=gene-LNP58_RS03640;Name=LNP58_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03640;old_locus_tag=LNP58_03640 NZ_CP086372.1 Protein Homology CDS 779946 780217 . - 0 ID=cds-WP_099051298.1;Parent=gene-LNP58_RS03640;Dbxref=Genbank:WP_099051298.1;Name=WP_099051298.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03640;product=IS5 family transposase;protein_id=WP_099051298.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 779419 779947 . - 1 ID=cds-WP_099051298.1;Parent=gene-LNP58_RS03640;Dbxref=Genbank:WP_099051298.1;Name=WP_099051298.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS03640;product=IS5 family transposase;protein_id=WP_099051298.1;transl_table=11 NZ_CP086372.1 RefSeq gene 780265 780340 . - . ID=gene-LNP58_RS03645;Name=LNP58_RS03645;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03645;old_locus_tag=LNP58_03645 NZ_CP086372.1 cmsearch ncRNA 780265 780340 . - . ID=rna-LNP58_RS03645;Parent=gene-LNP58_RS03645;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03645;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 780265 780340 . - . ID=exon-LNP58_RS03645-1;Parent=rna-LNP58_RS03645;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03645;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 780398 781009 . - . ID=gene-LNP58_RS03650;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LNP58_RS03650;old_locus_tag=LNP58_03650 NZ_CP086372.1 Protein Homology CDS 780398 781009 . - 0 ID=cds-WP_011257983.1;Parent=gene-LNP58_RS03650;Dbxref=Genbank:WP_011257983.1;Name=WP_011257983.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377105.1;locus_tag=LNP58_RS03650;product=guanylate kinase;protein_id=WP_011257983.1;transl_table=11 NZ_CP086372.1 RefSeq gene 781126 781986 . - . ID=gene-LNP58_RS03655;Name=LNP58_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03655;old_locus_tag=LNP58_03655 NZ_CP086372.1 Protein Homology CDS 781126 781986 . - 0 ID=cds-WP_011257982.1;Parent=gene-LNP58_RS03655;Dbxref=Genbank:WP_011257982.1;Name=WP_011257982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996763.1;locus_tag=LNP58_RS03655;product=YicC family protein;protein_id=WP_011257982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 782096 782821 . + . ID=gene-LNP58_RS03660;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LNP58_RS03660;old_locus_tag=LNP58_03660 NZ_CP086372.1 Protein Homology CDS 782096 782821 . + 0 ID=cds-WP_011257981.1;Parent=gene-LNP58_RS03660;Dbxref=Genbank:WP_011257981.1;Name=WP_011257981.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926909.1;locus_tag=LNP58_RS03660;product=ribonuclease PH;protein_id=WP_011257981.1;transl_table=11 NZ_CP086372.1 RefSeq gene 782818 783213 . + . ID=gene-LNP58_RS03665;Name=LNP58_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03665;old_locus_tag=LNP58_03665 NZ_CP086372.1 Protein Homology CDS 782818 783213 . + 0 ID=cds-WP_011257980.1;Parent=gene-LNP58_RS03665;Dbxref=Genbank:WP_011257980.1;Name=WP_011257980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156863.1;locus_tag=LNP58_RS03665;product=VOC family protein;protein_id=WP_011257980.1;transl_table=11 NZ_CP086372.1 RefSeq gene 783210 783809 . + . ID=gene-LNP58_RS03670;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LNP58_RS03670;old_locus_tag=LNP58_03670 NZ_CP086372.1 Protein Homology CDS 783210 783809 . + 0 ID=cds-WP_011257979.1;Parent=gene-LNP58_RS03670;Dbxref=Genbank:WP_011257979.1;Name=WP_011257979.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162718.1;locus_tag=LNP58_RS03670;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_011257979.1;transl_table=11 NZ_CP086372.1 RefSeq gene 783825 784982 . + . ID=gene-LNP58_RS03675;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LNP58_RS03675;old_locus_tag=LNP58_03675 NZ_CP086372.1 Protein Homology CDS 783825 784982 . + 0 ID=cds-WP_011257978.1;Parent=gene-LNP58_RS03675;Dbxref=Genbank:WP_011257978.1;Name=WP_011257978.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504451.1;locus_tag=LNP58_RS03675;product=radical SAM family heme chaperone HemW;protein_id=WP_011257978.1;transl_table=11 NZ_CP086372.1 RefSeq gene 785161 787569 . + . ID=gene-LNP58_RS03680;Name=LNP58_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03680;old_locus_tag=LNP58_03680 NZ_CP086372.1 Protein Homology CDS 785161 787569 . + 0 ID=cds-WP_011407789.1;Parent=gene-LNP58_RS03680;Dbxref=Genbank:WP_011407789.1;Name=WP_011407789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407789.1;locus_tag=LNP58_RS03680;product=DUF1631 domain-containing protein;protein_id=WP_011407789.1;transl_table=11 NZ_CP086372.1 RefSeq gene 787566 787913 . + . ID=gene-LNP58_RS03685;Name=LNP58_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03685;old_locus_tag=LNP58_03685 NZ_CP086372.1 Protein Homology CDS 787566 787913 . + 0 ID=cds-WP_011257976.1;Parent=gene-LNP58_RS03685;Dbxref=Genbank:WP_011257976.1;Name=WP_011257976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156859.1;locus_tag=LNP58_RS03685;product=PilZ domain-containing protein;protein_id=WP_011257976.1;transl_table=11 NZ_CP086372.1 RefSeq gene 788112 789437 . + . ID=gene-LNP58_RS03690;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=LNP58_RS03690;old_locus_tag=LNP58_03690 NZ_CP086372.1 Protein Homology CDS 788112 789437 . + 0 ID=cds-WP_011257975.1;Parent=gene-LNP58_RS03690;Dbxref=Genbank:WP_011257975.1;Name=WP_011257975.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926900.1;locus_tag=LNP58_RS03690;product=Xaa-Pro dipeptidase;protein_id=WP_011257975.1;transl_table=11 NZ_CP086372.1 RefSeq gene 789496 789572 . - . ID=gene-LNP58_RS03695;Name=LNP58_RS03695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03695;old_locus_tag=LNP58_03695 NZ_CP086372.1 cmsearch ncRNA 789496 789572 . - . ID=rna-LNP58_RS03695;Parent=gene-LNP58_RS03695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03695;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 789496 789572 . - . ID=exon-LNP58_RS03695-1;Parent=rna-LNP58_RS03695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03695;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 789670 790433 . + . ID=gene-LNP58_RS03700;Name=LNP58_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03700;old_locus_tag=LNP58_03700 NZ_CP086372.1 Protein Homology CDS 789670 789985 . + 0 ID=cds-WP_094187736.1;Parent=gene-LNP58_RS03700;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS03700;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 789985 790433 . + 2 ID=cds-WP_094187736.1;Parent=gene-LNP58_RS03700;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS03700;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 790465 790623 . - . ID=gene-LNP58_RS03705;Name=LNP58_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03705;old_locus_tag=LNP58_03705 NZ_CP086372.1 GeneMarkS-2+ CDS 790465 790623 . - 0 ID=cds-WP_162013040.1;Parent=gene-LNP58_RS03705;Dbxref=Genbank:WP_162013040.1;Name=WP_162013040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03705;product=hypothetical protein;protein_id=WP_162013040.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 790555 790956 . + . ID=gene-LNP58_RS03710;Name=LNP58_RS03710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03710;old_locus_tag=LNP58_03710;pseudo=true NZ_CP086372.1 Protein Homology CDS 790555 790956 . + 0 ID=cds-LNP58_RS03710;Parent=gene-LNP58_RS03710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508836.1;locus_tag=LNP58_RS03710;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 791141 792481 . - . ID=gene-LNP58_RS03715;Name=LNP58_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03715;old_locus_tag=LNP58_03715 NZ_CP086372.1 Protein Homology CDS 791141 792481 . - 0 ID=cds-WP_011257974.1;Parent=gene-LNP58_RS03715;Dbxref=Genbank:WP_011257974.1;Name=WP_011257974.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364488.1;locus_tag=LNP58_RS03715;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_011257974.1;transl_table=11 NZ_CP086372.1 RefSeq gene 792492 793034 . - . ID=gene-LNP58_RS03720;Name=LNP58_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03720;old_locus_tag=LNP58_03720 NZ_CP086372.1 Protein Homology CDS 792492 793034 . - 0 ID=cds-WP_011407785.1;Parent=gene-LNP58_RS03720;Dbxref=Genbank:WP_011407785.1;Name=WP_011407785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156855.1;locus_tag=LNP58_RS03720;product=YecA family protein;protein_id=WP_011407785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 793270 793491 . + . ID=gene-LNP58_RS03725;Name=LNP58_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03725;old_locus_tag=LNP58_03725 NZ_CP086372.1 Protein Homology CDS 793270 793491 . + 0 ID=cds-WP_011407784.1;Parent=gene-LNP58_RS03725;Dbxref=Genbank:WP_011407784.1;Name=WP_011407784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812462.1;locus_tag=LNP58_RS03725;product=TIGR02449 family protein;protein_id=WP_011407784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 793488 793787 . + . ID=gene-LNP58_RS03730;Name=LNP58_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03730;old_locus_tag=LNP58_03730 NZ_CP086372.1 Protein Homology CDS 793488 793787 . + 0 ID=cds-WP_011257971.1;Parent=gene-LNP58_RS03730;Dbxref=Genbank:WP_011257971.1;Name=WP_011257971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300828.1;locus_tag=LNP58_RS03730;product=cell division protein ZapA;protein_id=WP_011257971.1;transl_table=11 NZ_CP086372.1 RefSeq gene 793883 794066 . + . ID=gene-LNP58_RS03735;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LNP58_RS03735;old_locus_tag=LNP58_03735 NZ_CP086372.1 cmsearch ncRNA 793883 794066 . + . ID=rna-LNP58_RS03735;Parent=gene-LNP58_RS03735;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03735;product=6S RNA NZ_CP086372.1 cmsearch exon 793883 794066 . + . ID=exon-LNP58_RS03735-1;Parent=rna-LNP58_RS03735;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03735;product=6S RNA NZ_CP086372.1 RefSeq gene 794396 794986 . + . ID=gene-LNP58_RS03740;Name=LNP58_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03740;old_locus_tag=LNP58_03740 NZ_CP086372.1 Protein Homology CDS 794396 794986 . + 0 ID=cds-WP_011407783.1;Parent=gene-LNP58_RS03740;Dbxref=Genbank:WP_011407783.1;Name=WP_011407783.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090970.1;locus_tag=LNP58_RS03740;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011407783.1;transl_table=11 NZ_CP086372.1 RefSeq gene 794983 795453 . + . ID=gene-LNP58_RS03745;Name=LNP58_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03745;old_locus_tag=LNP58_03745 NZ_CP086372.1 Protein Homology CDS 794983 795453 . + 0 ID=cds-WP_011257969.1;Parent=gene-LNP58_RS03745;Dbxref=Genbank:WP_011257969.1;Name=WP_011257969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812469.1;locus_tag=LNP58_RS03745;product=EVE domain-containing protein;protein_id=WP_011257969.1;transl_table=11 NZ_CP086372.1 RefSeq gene 795545 796192 . + . ID=gene-LNP58_RS03750;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LNP58_RS03750;old_locus_tag=LNP58_03750 NZ_CP086372.1 Protein Homology CDS 795545 796192 . + 0 ID=cds-WP_011407781.1;Parent=gene-LNP58_RS03750;Dbxref=Genbank:WP_011407781.1;Name=WP_011407781.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994531.1;locus_tag=LNP58_RS03750;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_011407781.1;transl_table=11 NZ_CP086372.1 RefSeq gene 796343 796792 . + . ID=gene-LNP58_RS03755;Name=LNP58_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03755;old_locus_tag=LNP58_03755 NZ_CP086372.1 Protein Homology CDS 796343 796792 . + 0 ID=cds-WP_011407780.1;Parent=gene-LNP58_RS03755;Dbxref=Genbank:WP_011407780.1;Name=WP_011407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967674.1;locus_tag=LNP58_RS03755;product=DUF192 domain-containing protein;protein_id=WP_011407780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 796942 797823 . + . ID=gene-LNP58_RS03760;Name=LNP58_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03760;old_locus_tag=LNP58_03760 NZ_CP086372.1 Protein Homology CDS 796942 797823 . + 0 ID=cds-WP_011257966.1;Parent=gene-LNP58_RS03760;Dbxref=Genbank:WP_011257966.1;Name=WP_011257966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851075.1;locus_tag=LNP58_RS03760;product=SirB1 family protein;protein_id=WP_011257966.1;transl_table=11 NZ_CP086372.1 RefSeq gene 797873 798112 . - . ID=gene-LNP58_RS03765;Name=LNP58_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03765;old_locus_tag=LNP58_03765 NZ_CP086372.1 Protein Homology CDS 797873 798112 . - 0 ID=cds-WP_011257965.1;Parent=gene-LNP58_RS03765;Dbxref=Genbank:WP_011257965.1;Name=WP_011257965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112973.1;locus_tag=LNP58_RS03765;product=rubredoxin;protein_id=WP_011257965.1;transl_table=11 NZ_CP086372.1 RefSeq gene 798136 798759 . + . ID=gene-LNP58_RS03770;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LNP58_RS03770;old_locus_tag=LNP58_03770 NZ_CP086372.1 Protein Homology CDS 798136 798759 . + 0 ID=cds-WP_011407778.1;Parent=gene-LNP58_RS03770;Dbxref=Genbank:WP_011407778.1;Name=WP_011407778.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112972.1;locus_tag=LNP58_RS03770;product=thiamine phosphate synthase;protein_id=WP_011407778.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 798820 799050 . + . ID=gene-LNP58_RS03775;Name=LNP58_RS03775;end_range=799050,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03775;old_locus_tag=LNP58_03775;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 798820 799050 . + 0 ID=cds-LNP58_RS03775;Parent=gene-LNP58_RS03775;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=799050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611821.1;locus_tag=LNP58_RS03775;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 799102 800156 . + . ID=gene-LNP58_RS03780;Name=LNP58_RS03780;end_range=800156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03780;old_locus_tag=LNP58_03780;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 799102 800156 . + 0 ID=cds-LNP58_RS03780;Parent=gene-LNP58_RS03780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=800156,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=LNP58_RS03780;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 cmsearch sequence_feature 799377 799493 . + . ID=id-LNP58_RS03780;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03780;pseudo=true NZ_CP086372.1 RefSeq gene 800189 801231 . - . ID=gene-LNP58_RS03785;Name=LNP58_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03785;old_locus_tag=LNP58_03785 NZ_CP086372.1 Protein Homology CDS 801036 801231 . - 0 ID=cds-WP_229001935.1;Parent=gene-LNP58_RS03785;Dbxref=Genbank:WP_229001935.1;Name=WP_229001935.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS03785;product=IS3 family transposase;protein_id=WP_229001935.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 800189 801036 . - 2 ID=cds-WP_229001935.1;Parent=gene-LNP58_RS03785;Dbxref=Genbank:WP_229001935.1;Name=WP_229001935.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS03785;product=IS3 family transposase;protein_id=WP_229001935.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 801445 801549 . + . ID=gene-LNP58_RS03790;Name=LNP58_RS03790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03790;old_locus_tag=LNP58_03790;partial=true;pseudo=true;start_range=.,801445 NZ_CP086372.1 Protein Homology CDS 801445 801549 . + 0 ID=cds-LNP58_RS03790;Parent=gene-LNP58_RS03790;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS03790;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,801445;transl_table=11 NZ_CP086372.1 RefSeq gene 801701 801844 . + . ID=gene-LNP58_RS03795;Name=LNP58_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03795;old_locus_tag=LNP58_03795 NZ_CP086372.1 Protein Homology CDS 801701 801844 . + 0 ID=cds-WP_033013246.1;Parent=gene-LNP58_RS03795;Dbxref=Genbank:WP_033013246.1;Name=WP_033013246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304944.1;locus_tag=LNP58_RS03795;product=hypothetical protein;protein_id=WP_033013246.1;transl_table=11 NZ_CP086372.1 RefSeq gene 802020 804329 . - . ID=gene-LNP58_RS03800;Name=LNP58_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03800;old_locus_tag=LNP58_03800 NZ_CP086372.1 Protein Homology CDS 802020 804329 . - 0 ID=cds-WP_011257960.1;Parent=gene-LNP58_RS03800;Dbxref=Genbank:WP_011257960.1;Name=WP_011257960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157485.1;locus_tag=LNP58_RS03800;product=NADP-dependent malic enzyme;protein_id=WP_011257960.1;transl_table=11 NZ_CP086372.1 RefSeq gene 804527 805900 . - . ID=gene-LNP58_RS03805;Name=LNP58_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03805;old_locus_tag=LNP58_03805 NZ_CP086372.1 Protein Homology CDS 804527 805900 . - 0 ID=cds-WP_011407775.1;Parent=gene-LNP58_RS03805;Dbxref=Genbank:WP_011407775.1;Name=WP_011407775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928723.1;locus_tag=LNP58_RS03805;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_011407775.1;transl_table=11 NZ_CP086372.1 RefSeq gene 806191 807363 . + . ID=gene-LNP58_RS03810;Name=LNP58_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03810;old_locus_tag=LNP58_03810 NZ_CP086372.1 Protein Homology CDS 806191 807363 . + 0 ID=cds-WP_011407774.1;Parent=gene-LNP58_RS03810;Dbxref=Genbank:WP_011407774.1;Name=WP_011407774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964505.1;locus_tag=LNP58_RS03810;product=porin;protein_id=WP_011407774.1;transl_table=11 NZ_CP086372.1 RefSeq gene 807502 807577 . - . ID=gene-LNP58_RS03815;Name=LNP58_RS03815;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03815;old_locus_tag=LNP58_03815 NZ_CP086372.1 cmsearch ncRNA 807502 807577 . - . ID=rna-LNP58_RS03815;Parent=gene-LNP58_RS03815;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03815;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 807502 807577 . - . ID=exon-LNP58_RS03815-1;Parent=rna-LNP58_RS03815;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03815;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 807685 810330 . + . ID=gene-LNP58_RS03820;Name=LNP58_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03820;old_locus_tag=LNP58_03820 NZ_CP086372.1 Protein Homology CDS 807685 810330 . + 0 ID=cds-WP_011407773.1;Parent=gene-LNP58_RS03820;Dbxref=Genbank:WP_011407773.1;Name=WP_011407773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160257.1;locus_tag=LNP58_RS03820;product=PAS-domain containing protein;protein_id=WP_011407773.1;transl_table=11 NZ_CP086372.1 RefSeq gene 810646 811995 . + . ID=gene-LNP58_RS03825;Name=LNP58_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03825;old_locus_tag=LNP58_03825 NZ_CP086372.1 Protein Homology CDS 810646 811995 . + 0 ID=cds-WP_011407772.1;Parent=gene-LNP58_RS03825;Dbxref=Genbank:WP_011407772.1;Name=WP_011407772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157488.1;locus_tag=LNP58_RS03825;product=MFS transporter;protein_id=WP_011407772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 811992 812771 . + . ID=gene-LNP58_RS03830;Name=LNP58_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03830;old_locus_tag=LNP58_03830 NZ_CP086372.1 Protein Homology CDS 811992 812771 . + 0 ID=cds-WP_011257955.1;Parent=gene-LNP58_RS03830;Dbxref=Genbank:WP_011257955.1;Name=WP_011257955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376702.1;locus_tag=LNP58_RS03830;product=substrate-binding domain-containing protein;protein_id=WP_011257955.1;transl_table=11 NZ_CP086372.1 RefSeq gene 812763 813665 . - . ID=gene-LNP58_RS03835;Name=LNP58_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03835;old_locus_tag=LNP58_03835 NZ_CP086372.1 Protein Homology CDS 812763 813665 . - 0 ID=cds-WP_011257953.1;Parent=gene-LNP58_RS03835;Dbxref=Genbank:WP_011257953.1;Name=WP_011257953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159489.1;locus_tag=LNP58_RS03835;product=LysR family transcriptional regulator;protein_id=WP_011257953.1;transl_table=11 NZ_CP086372.1 RefSeq gene 813974 814612 . + . ID=gene-LNP58_RS03840;Name=LNP58_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03840;old_locus_tag=LNP58_03840 NZ_CP086372.1 Protein Homology CDS 813974 814612 . + 0 ID=cds-WP_011407771.1;Parent=gene-LNP58_RS03840;Dbxref=Genbank:WP_011407771.1;Name=WP_011407771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851541.1;locus_tag=LNP58_RS03840;product=aldo/keto reductase;protein_id=WP_011407771.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 814609 815148 . + . ID=gene-LNP58_RS03845;Name=LNP58_RS03845;end_range=815148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03845;old_locus_tag=LNP58_03845;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 814609 815148 . + 0 ID=cds-LNP58_RS03845;Parent=gene-LNP58_RS03845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=815148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091015.1;locus_tag=LNP58_RS03845;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 815165 815533 . + . ID=gene-LNP58_RS03850;Name=LNP58_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03850;old_locus_tag=LNP58_03850 NZ_CP086372.1 Protein Homology CDS 815165 815533 . + 0 ID=cds-WP_041182382.1;Parent=gene-LNP58_RS03850;Dbxref=Genbank:WP_041182382.1;Name=WP_041182382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167386.1;locus_tag=LNP58_RS03850;product=Atu4866 domain-containing protein;protein_id=WP_041182382.1;transl_table=11 NZ_CP086372.1 RefSeq gene 815664 816302 . - . ID=gene-LNP58_RS03855;Name=LNP58_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03855;old_locus_tag=LNP58_03855 NZ_CP086372.1 Protein Homology CDS 815664 816302 . - 0 ID=cds-WP_011257949.1;Parent=gene-LNP58_RS03855;Dbxref=Genbank:WP_011257949.1;Name=WP_011257949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257949.1;locus_tag=LNP58_RS03855;product=response regulator transcription factor;protein_id=WP_011257949.1;transl_table=11 NZ_CP086372.1 RefSeq gene 816342 817391 . - . ID=gene-LNP58_RS03860;Name=LNP58_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03860;old_locus_tag=LNP58_03860 NZ_CP086372.1 Protein Homology CDS 816342 817391 . - 0 ID=cds-WP_011407770.1;Parent=gene-LNP58_RS03860;Dbxref=Genbank:WP_011407770.1;Name=WP_011407770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157495.1;locus_tag=LNP58_RS03860;product=ABC transporter substrate-binding protein;protein_id=WP_011407770.1;transl_table=11 NZ_CP086372.1 RefSeq gene 817391 818776 . - . ID=gene-LNP58_RS03865;Name=LNP58_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03865;old_locus_tag=LNP58_03865 NZ_CP086372.1 Protein Homology CDS 817391 818776 . - 0 ID=cds-WP_011407769.1;Parent=gene-LNP58_RS03865;Dbxref=Genbank:WP_011407769.1;Name=WP_011407769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932775.1;locus_tag=LNP58_RS03865;product=sensor histidine kinase;protein_id=WP_011407769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 818769 819470 . - . ID=gene-LNP58_RS03870;Name=LNP58_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03870;old_locus_tag=LNP58_03870 NZ_CP086372.1 Protein Homology CDS 818769 819470 . - 0 ID=cds-WP_011407768.1;Parent=gene-LNP58_RS03870;Dbxref=Genbank:WP_011407768.1;Name=WP_011407768.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163399.1;locus_tag=LNP58_RS03870;product=response regulator;protein_id=WP_011407768.1;transl_table=11 NZ_CP086372.1 RefSeq gene 819726 820919 . + . ID=gene-LNP58_RS03875;Name=LNP58_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03875;old_locus_tag=LNP58_03875 NZ_CP086372.1 Protein Homology CDS 819726 820919 . + 0 ID=cds-WP_011407767.1;Parent=gene-LNP58_RS03875;Dbxref=Genbank:WP_011407767.1;Name=WP_011407767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157498.1;locus_tag=LNP58_RS03875;product=OprO/OprP family phosphate-selective porin;protein_id=WP_011407767.1;transl_table=11 NZ_CP086372.1 RefSeq gene 821147 822475 . + . ID=gene-LNP58_RS03880;Name=LNP58_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03880;old_locus_tag=LNP58_03880 NZ_CP086372.1 Protein Homology CDS 821147 822475 . + 0 ID=cds-WP_011257945.1;Parent=gene-LNP58_RS03880;Dbxref=Genbank:WP_011257945.1;Name=WP_011257945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483418.1;locus_tag=LNP58_RS03880;product=CitMHS family transporter;protein_id=WP_011257945.1;transl_table=11 NZ_CP086372.1 RefSeq gene 822587 823327 . + . ID=gene-LNP58_RS03885;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LNP58_RS03885;old_locus_tag=LNP58_03885 NZ_CP086372.1 Protein Homology CDS 822587 823327 . + 0 ID=cds-WP_011407766.1;Parent=gene-LNP58_RS03885;Dbxref=Genbank:WP_011407766.1;Name=WP_011407766.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391443.1;locus_tag=LNP58_RS03885;product=acetoacetyl-CoA reductase;protein_id=WP_011407766.1;transl_table=11 NZ_CP086372.1 RefSeq gene 823568 824599 . + . ID=gene-LNP58_RS03890;Name=LNP58_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03890;old_locus_tag=LNP58_03890 NZ_CP086372.1 Protein Homology CDS 823568 824599 . + 0 ID=cds-WP_011407765.1;Parent=gene-LNP58_RS03890;Dbxref=Genbank:WP_011407765.1;Name=WP_011407765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932772.1;locus_tag=LNP58_RS03890;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011407765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 824728 824792 . - . ID=gene-LNP58_RS03895;Name=LNP58_RS03895;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03895;old_locus_tag=LNP58_03895 NZ_CP086372.1 cmsearch ncRNA 824728 824792 . - . ID=rna-LNP58_RS03895;Parent=gene-LNP58_RS03895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03895;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 824728 824792 . - . ID=exon-LNP58_RS03895-1;Parent=rna-LNP58_RS03895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03895;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 824840 826171 . - . ID=gene-LNP58_RS03900;Name=LNP58_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03900;old_locus_tag=LNP58_03900 NZ_CP086372.1 Protein Homology CDS 824840 826171 . - 0 ID=cds-WP_011407764.1;Parent=gene-LNP58_RS03900;Dbxref=Genbank:WP_011407764.1;Name=WP_011407764.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407764.1;locus_tag=LNP58_RS03900;product=MFS transporter;protein_id=WP_011407764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 826441 828885 . + . ID=gene-LNP58_RS03905;Name=LNP58_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03905;old_locus_tag=LNP58_03905 NZ_CP086372.1 Protein Homology CDS 826441 828885 . + 0 ID=cds-WP_011407763.1;Parent=gene-LNP58_RS03905;Dbxref=Genbank:WP_011407763.1;Name=WP_011407763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174521.1;locus_tag=LNP58_RS03905;product=TonB-dependent receptor;protein_id=WP_011407763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 828920 830836 . + . ID=gene-LNP58_RS03910;Name=LNP58_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03910;old_locus_tag=LNP58_03910 NZ_CP086372.1 Protein Homology CDS 828920 830836 . + 0 ID=cds-WP_011407762.1;Parent=gene-LNP58_RS03910;Dbxref=Genbank:WP_011407762.1;Name=WP_011407762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365510.1;locus_tag=LNP58_RS03910;product=amylosucrase;protein_id=WP_011407762.1;transl_table=11 NZ_CP086372.1 RefSeq gene 831003 831683 . - . ID=gene-LNP58_RS03915;Name=LNP58_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03915;old_locus_tag=LNP58_03915 NZ_CP086372.1 Protein Homology CDS 831003 831683 . - 0 ID=cds-WP_011407761.1;Parent=gene-LNP58_RS03915;Dbxref=Genbank:WP_011407761.1;Name=WP_011407761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157539.1;locus_tag=LNP58_RS03915;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_011407761.1;transl_table=11 NZ_CP086372.1 RefSeq gene 831836 833098 . - . ID=gene-LNP58_RS03920;Name=LNP58_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03920;old_locus_tag=LNP58_03920 NZ_CP086372.1 Protein Homology CDS 831836 833098 . - 0 ID=cds-WP_011257938.1;Parent=gene-LNP58_RS03920;Dbxref=Genbank:WP_011257938.1;Name=WP_011257938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365514.1;locus_tag=LNP58_RS03920;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=WP_011257938.1;transl_table=11 NZ_CP086372.1 RefSeq gene 833098 834189 . - . ID=gene-LNP58_RS03925;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LNP58_RS03925;old_locus_tag=LNP58_03925 NZ_CP086372.1 Protein Homology CDS 833098 834189 . - 0 ID=cds-WP_011257937.1;Parent=gene-LNP58_RS03925;Dbxref=Genbank:WP_011257937.1;Name=WP_011257937.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038460.1;locus_tag=LNP58_RS03925;product=ribosome small subunit-dependent GTPase A;protein_id=WP_011257937.1;transl_table=11 NZ_CP086372.1 RefSeq gene 834343 835614 . + . ID=gene-LNP58_RS03930;Name=LNP58_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03930;old_locus_tag=LNP58_03930 NZ_CP086372.1 Protein Homology CDS 834343 835614 . + 0 ID=cds-WP_011257936.1;Parent=gene-LNP58_RS03930;Dbxref=Genbank:WP_011257936.1;Name=WP_011257936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902304.1;locus_tag=LNP58_RS03930;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011257936.1;transl_table=11 NZ_CP086372.1 RefSeq gene 835614 836252 . + . ID=gene-LNP58_RS03935;Name=LNP58_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03935;old_locus_tag=LNP58_03935 NZ_CP086372.1 Protein Homology CDS 835614 836252 . + 0 ID=cds-WP_011407760.1;Parent=gene-LNP58_RS03935;Dbxref=Genbank:WP_011407760.1;Name=WP_011407760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171955.1;locus_tag=LNP58_RS03935;product=SGNH/GDSL hydrolase family protein;protein_id=WP_011407760.1;transl_table=11 NZ_CP086372.1 RefSeq gene 836575 837246 . + . ID=gene-LNP58_RS03940;Name=LNP58_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03940;old_locus_tag=LNP58_03940 NZ_CP086372.1 Protein Homology CDS 836575 837246 . + 0 ID=cds-WP_011407759.1;Parent=gene-LNP58_RS03940;Dbxref=Genbank:WP_011407759.1;Name=WP_011407759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038464.1;locus_tag=LNP58_RS03940;product=class I SAM-dependent methyltransferase;protein_id=WP_011407759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 837467 837543 . + . ID=gene-LNP58_RS03945;Name=LNP58_RS03945;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS03945;old_locus_tag=LNP58_03945 NZ_CP086372.1 cmsearch ncRNA 837467 837543 . + . ID=rna-LNP58_RS03945;Parent=gene-LNP58_RS03945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03945;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 837467 837543 . + . ID=exon-LNP58_RS03945-1;Parent=rna-LNP58_RS03945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS03945;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 837548 838339 . - . ID=gene-LNP58_RS03950;Name=LNP58_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03950;old_locus_tag=LNP58_03950 NZ_CP086372.1 Protein Homology CDS 837548 838339 . - 0 ID=cds-WP_011407758.1;Parent=gene-LNP58_RS03950;Dbxref=Genbank:WP_011407758.1;Name=WP_011407758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407758.1;locus_tag=LNP58_RS03950;product=polysaccharide deacetylase family protein;protein_id=WP_011407758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 838385 839311 . + . ID=gene-LNP58_RS03955;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LNP58_RS03955;old_locus_tag=LNP58_03955 NZ_CP086372.1 Protein Homology CDS 838385 839311 . + 0 ID=cds-WP_011257932.1;Parent=gene-LNP58_RS03955;Dbxref=Genbank:WP_011257932.1;Name=WP_011257932.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913558.1;locus_tag=LNP58_RS03955;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011257932.1;transl_table=11 NZ_CP086372.1 RefSeq gene 839643 839978 . + . ID=gene-LNP58_RS03960;Name=LNP58_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03960;old_locus_tag=LNP58_03960 NZ_CP086372.1 Protein Homology CDS 839643 839978 . + 0 ID=cds-WP_011407757.1;Parent=gene-LNP58_RS03960;Dbxref=Genbank:WP_011407757.1;Name=WP_011407757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025840.2;locus_tag=LNP58_RS03960;product=DarT ssDNA thymidine ADP-ribosyltransferase family protein;protein_id=WP_011407757.1;transl_table=11 NZ_CP086372.1 RefSeq gene 840022 841341 . - . ID=gene-LNP58_RS03965;Name=LNP58_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03965;old_locus_tag=LNP58_03965 NZ_CP086372.1 Protein Homology CDS 840022 841341 . - 0 ID=cds-WP_011407756.1;Parent=gene-LNP58_RS03965;Dbxref=Genbank:WP_011407756.1;Name=WP_011407756.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS03965;product=IS701 family transposase;protein_id=WP_011407756.1;transl_table=11 NZ_CP086372.1 RefSeq gene 841444 841773 . + . ID=gene-LNP58_RS03970;Name=LNP58_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03970;old_locus_tag=LNP58_03970 NZ_CP086372.1 Protein Homology CDS 841444 841773 . + 0 ID=cds-WP_199285672.1;Parent=gene-LNP58_RS03970;Dbxref=Genbank:WP_199285672.1;Name=WP_199285672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025840.2;locus_tag=LNP58_RS03970;product=DUF4433 domain-containing protein;protein_id=WP_199285672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 841770 842189 . + . ID=gene-LNP58_RS03975;Name=LNP58_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03975;old_locus_tag=LNP58_03975 NZ_CP086372.1 Protein Homology CDS 841770 842189 . + 0 ID=cds-WP_011407754.1;Parent=gene-LNP58_RS03975;Dbxref=Genbank:WP_011407754.1;Name=WP_011407754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=LNP58_RS03975;product=macro domain-containing protein;protein_id=WP_011407754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 842241 843209 . + . ID=gene-LNP58_RS03980;Name=LNP58_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03980;old_locus_tag=LNP58_03980 NZ_CP086372.1 Protein Homology CDS 842241 843209 . + 0 ID=cds-WP_011258802.1-4;Parent=gene-LNP58_RS03980;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS03980;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 843344 844000 . + . ID=gene-LNP58_RS03985;Name=LNP58_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03985;old_locus_tag=LNP58_03985 NZ_CP086372.1 GeneMarkS-2+ CDS 843344 844000 . + 0 ID=cds-WP_075246166.1;Parent=gene-LNP58_RS03985;Dbxref=Genbank:WP_075246166.1;Name=WP_075246166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS03985;product=phosphate phosphatase;protein_id=WP_075246166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 844038 845273 . - . ID=gene-LNP58_RS03990;Name=LNP58_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS03990;old_locus_tag=LNP58_03990 NZ_CP086372.1 Protein Homology CDS 844038 845273 . - 0 ID=cds-WP_011257570.1;Parent=gene-LNP58_RS03990;Dbxref=Genbank:WP_011257570.1;Name=WP_011257570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS03990;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257570.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 845575 845901 . + . ID=gene-LNP58_RS03995;Name=LNP58_RS03995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS03995;old_locus_tag=LNP58_03995;pseudo=true NZ_CP086372.1 Protein Homology CDS 845575 845901 . + 0 ID=cds-LNP58_RS03995;Parent=gene-LNP58_RS03995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091038.1;locus_tag=LNP58_RS03995;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 846262 847863 . + . ID=gene-LNP58_RS04000;Name=LNP58_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04000;old_locus_tag=LNP58_04000 NZ_CP086372.1 Protein Homology CDS 846262 847863 . + 0 ID=cds-WP_011407751.1;Parent=gene-LNP58_RS04000;Dbxref=Genbank:WP_011407751.1;Name=WP_011407751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850148.1;locus_tag=LNP58_RS04000;product=polysaccharide lyase family protein;protein_id=WP_011407751.1;transl_table=11 NZ_CP086372.1 RefSeq gene 848010 848086 . + . ID=gene-LNP58_RS04005;Name=LNP58_RS04005;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04005;old_locus_tag=LNP58_04005 NZ_CP086372.1 cmsearch ncRNA 848010 848086 . + . ID=rna-LNP58_RS04005;Parent=gene-LNP58_RS04005;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04005;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 848010 848086 . + . ID=exon-LNP58_RS04005-1;Parent=rna-LNP58_RS04005;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04005;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 848480 849226 . - . ID=gene-LNP58_RS04010;Name=LNP58_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04010;old_locus_tag=LNP58_04010 NZ_CP086372.1 Protein Homology CDS 848480 849226 . - 0 ID=cds-WP_041182379.1;Parent=gene-LNP58_RS04010;Dbxref=Genbank:WP_041182379.1;Name=WP_041182379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365555.1;locus_tag=LNP58_RS04010;product=cellulase;protein_id=WP_041182379.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 849644 850457 . - . ID=gene-LNP58_RS04015;Name=LNP58_RS04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04015;old_locus_tag=LNP58_04015;pseudo=true NZ_CP086372.1 Protein Homology CDS 849644 850457 . - 0 ID=cds-LNP58_RS04015;Parent=gene-LNP58_RS04015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171825.1;locus_tag=LNP58_RS04015;product=cellulase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 850799 850875 . - . ID=gene-LNP58_RS04020;Name=LNP58_RS04020;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04020;old_locus_tag=LNP58_04020 NZ_CP086372.1 cmsearch ncRNA 850799 850875 . - . ID=rna-LNP58_RS04020;Parent=gene-LNP58_RS04020;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04020;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 850799 850875 . - . ID=exon-LNP58_RS04020-1;Parent=rna-LNP58_RS04020;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04020;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 850974 851489 . - . ID=gene-LNP58_RS04025;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LNP58_RS04025;old_locus_tag=LNP58_04025 NZ_CP086372.1 Protein Homology CDS 850974 851489 . - 0 ID=cds-WP_011407749.1;Parent=gene-LNP58_RS04025;Dbxref=Genbank:WP_011407749.1;Name=WP_011407749.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303679.1;locus_tag=LNP58_RS04025;product=peptide deformylase;protein_id=WP_011407749.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 851811 852233 . - . ID=gene-LNP58_RS04030;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=pseudogene;locus_tag=LNP58_RS04030;old_locus_tag=LNP58_04030;pseudo=true NZ_CP086372.1 Protein Homology CDS 851811 852233 . - 0 ID=cds-LNP58_RS04030;Parent=gene-LNP58_RS04030;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.%3B internal stop;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483474.1;locus_tag=LNP58_RS04030;product=arsenate reductase (glutaredoxin);pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 852471 852878 . - . ID=gene-LNP58_RS04035;Name=LNP58_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04035;old_locus_tag=LNP58_04035 NZ_CP086372.1 GeneMarkS-2+ CDS 852471 852878 . - 0 ID=cds-WP_229001920.1;Parent=gene-LNP58_RS04035;Dbxref=Genbank:WP_229001920.1;Name=WP_229001920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04035;product=hypothetical protein;protein_id=WP_229001920.1;transl_table=11 NZ_CP086372.1 RefSeq gene 853005 854873 . - . ID=gene-LNP58_RS04040;Name=LNP58_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04040;old_locus_tag=LNP58_04040 NZ_CP086372.1 Protein Homology CDS 853005 854873 . - 0 ID=cds-WP_012445908.1;Parent=gene-LNP58_RS04040;Dbxref=Genbank:WP_012445908.1;Name=WP_012445908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303142.1;locus_tag=LNP58_RS04040;product=glycosyltransferase family 39 protein;protein_id=WP_012445908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 854912 855865 . + . ID=gene-LNP58_RS04045;Name=LNP58_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04045;old_locus_tag=LNP58_04045 NZ_CP086372.1 Protein Homology CDS 854912 855865 . + 0 ID=cds-WP_011407746.1;Parent=gene-LNP58_RS04045;Dbxref=Genbank:WP_011407746.1;Name=WP_011407746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502249.1;locus_tag=LNP58_RS04045;product=MoxR family ATPase;protein_id=WP_011407746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 855871 856827 . + . ID=gene-LNP58_RS04050;Name=LNP58_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04050;old_locus_tag=LNP58_04050 NZ_CP086372.1 Protein Homology CDS 855871 856827 . + 0 ID=cds-WP_011257917.1;Parent=gene-LNP58_RS04050;Dbxref=Genbank:WP_011257917.1;Name=WP_011257917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850007.1;locus_tag=LNP58_RS04050;product=DUF58 domain-containing protein;protein_id=WP_011257917.1;transl_table=11 NZ_CP086372.1 RefSeq gene 856820 858772 . + . ID=gene-LNP58_RS04055;Name=LNP58_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04055;old_locus_tag=LNP58_04055 NZ_CP086372.1 Protein Homology CDS 856820 858772 . + 0 ID=cds-WP_011257916.1;Parent=gene-LNP58_RS04055;Dbxref=Genbank:WP_011257916.1;Name=WP_011257916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346625.1;locus_tag=LNP58_RS04055;product=DUF3488 and transglutaminase-like domain-containing protein;protein_id=WP_011257916.1;transl_table=11 NZ_CP086372.1 RefSeq gene 858769 859302 . + . ID=gene-LNP58_RS04060;Name=LNP58_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04060;old_locus_tag=LNP58_04060 NZ_CP086372.1 Protein Homology CDS 858769 859302 . + 0 ID=cds-WP_011257915.1;Parent=gene-LNP58_RS04060;Dbxref=Genbank:WP_011257915.1;Name=WP_011257915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920486.1;locus_tag=LNP58_RS04060;product=Slp family lipoprotein;protein_id=WP_011257915.1;transl_table=11 NZ_CP086372.1 RefSeq gene 859422 859772 . - . ID=gene-LNP58_RS04065;Name=LNP58_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04065;old_locus_tag=LNP58_04065 NZ_CP086372.1 Protein Homology CDS 859422 859772 . - 0 ID=cds-WP_011407744.1;Parent=gene-LNP58_RS04065;Dbxref=Genbank:WP_011407744.1;Name=WP_011407744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155799.1;locus_tag=LNP58_RS04065;product=histidine triad nucleotide-binding protein;protein_id=WP_011407744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 859874 860467 . - . ID=gene-LNP58_RS04070;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LNP58_RS04070;old_locus_tag=LNP58_04070 NZ_CP086372.1 Protein Homology CDS 859874 860467 . - 0 ID=cds-WP_011257913.1;Parent=gene-LNP58_RS04070;Dbxref=Genbank:WP_011257913.1;Name=WP_011257913.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483843.1;locus_tag=LNP58_RS04070;product=recombination mediator RecR;protein_id=WP_011257913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 860565 860885 . - . ID=gene-LNP58_RS04075;Name=LNP58_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04075;old_locus_tag=LNP58_04075 NZ_CP086372.1 Protein Homology CDS 860565 860885 . - 0 ID=cds-WP_011257912.1;Parent=gene-LNP58_RS04075;Dbxref=Genbank:WP_011257912.1;Name=WP_011257912.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=LNP58_RS04075;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_011257912.1;transl_table=11 NZ_CP086372.1 RefSeq gene 860892 862988 . - . ID=gene-LNP58_RS04080;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LNP58_RS04080;old_locus_tag=LNP58_04080 NZ_CP086372.1 Protein Homology CDS 860892 862988 . - 0 ID=cds-WP_011257911.1;Parent=gene-LNP58_RS04080;Dbxref=Genbank:WP_011257911.1;Name=WP_011257911.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=LNP58_RS04080;product=DNA polymerase III subunit gamma/tau;protein_id=WP_011257911.1;transl_table=11 NZ_CP086372.1 RefSeq gene 863124 863216 . + . ID=gene-LNP58_RS04085;Name=LNP58_RS04085;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04085;old_locus_tag=LNP58_04085 NZ_CP086372.1 tRNAscan-SE tRNA 863124 863216 . + . ID=rna-LNP58_RS04085;Parent=gene-LNP58_RS04085;anticodon=(pos:863158..863160);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04085;product=tRNA-Ser NZ_CP086372.1 tRNAscan-SE exon 863124 863216 . + . ID=exon-LNP58_RS04085-1;Parent=rna-LNP58_RS04085;anticodon=(pos:863158..863160);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04085;product=tRNA-Ser NZ_CP086372.1 RefSeq gene 863292 863388 . + . ID=gene-LNP58_RS04090;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LNP58_RS04090;old_locus_tag=LNP58_04090 NZ_CP086372.1 cmsearch SRP_RNA 863292 863388 . + . ID=rna-LNP58_RS04090;Parent=gene-LNP58_RS04090;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04090;product=signal recognition particle sRNA small type NZ_CP086372.1 cmsearch exon 863292 863388 . + . ID=exon-LNP58_RS04090-1;Parent=rna-LNP58_RS04090;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04090;product=signal recognition particle sRNA small type NZ_CP086372.1 RefSeq gene 863550 863996 . - . ID=gene-LNP58_RS04095;Name=LNP58_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04095;old_locus_tag=LNP58_04095 NZ_CP086372.1 Protein Homology CDS 863550 863996 . - 0 ID=cds-WP_011257910.1;Parent=gene-LNP58_RS04095;Dbxref=Genbank:WP_011257910.1;Name=WP_011257910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158137.1;locus_tag=LNP58_RS04095;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_011257910.1;transl_table=11 NZ_CP086372.1 RefSeq gene 863993 864238 . - . ID=gene-LNP58_RS04100;Name=LNP58_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04100;old_locus_tag=LNP58_04100 NZ_CP086372.1 Protein Homology CDS 863993 864238 . - 0 ID=cds-WP_011257909.1;Parent=gene-LNP58_RS04100;Dbxref=Genbank:WP_011257909.1;Name=WP_011257909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257909.1;locus_tag=LNP58_RS04100;product=MoaD/ThiS family protein;protein_id=WP_011257909.1;transl_table=11 NZ_CP086372.1 RefSeq gene 864235 864732 . - . ID=gene-LNP58_RS04105;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LNP58_RS04105;old_locus_tag=LNP58_04105 NZ_CP086372.1 Protein Homology CDS 864235 864732 . - 0 ID=cds-WP_011407742.1;Parent=gene-LNP58_RS04105;Dbxref=Genbank:WP_011407742.1;Name=WP_011407742.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159642.1;locus_tag=LNP58_RS04105;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_011407742.1;transl_table=11 NZ_CP086372.1 RefSeq gene 864757 865056 . - . ID=gene-LNP58_RS04110;Name=LNP58_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04110;old_locus_tag=LNP58_04110 NZ_CP086372.1 Protein Homology CDS 864757 865056 . - 0 ID=cds-WP_229001936.1;Parent=gene-LNP58_RS04110;Dbxref=Genbank:WP_229001936.1;Name=WP_229001936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158134.1;locus_tag=LNP58_RS04110;product=DUF4440 domain-containing protein;protein_id=WP_229001936.1;transl_table=11 NZ_CP086372.1 RefSeq gene 865134 866165 . - . ID=gene-LNP58_RS04115;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LNP58_RS04115;old_locus_tag=LNP58_04115 NZ_CP086372.1 Protein Homology CDS 865134 866165 . - 0 ID=cds-WP_011257906.1;Parent=gene-LNP58_RS04115;Dbxref=Genbank:WP_011257906.1;Name=WP_011257906.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814367.1;locus_tag=LNP58_RS04115;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_011257906.1;transl_table=11 NZ_CP086372.1 RefSeq gene 866165 866914 . - . ID=gene-LNP58_RS04120;Name=LNP58_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04120;old_locus_tag=LNP58_04120 NZ_CP086372.1 Protein Homology CDS 866165 866914 . - 0 ID=cds-WP_011257905.1;Parent=gene-LNP58_RS04120;Dbxref=Genbank:WP_011257905.1;Name=WP_011257905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158132.1;locus_tag=LNP58_RS04120;product=MBL fold metallo-hydrolase;protein_id=WP_011257905.1;transl_table=11 NZ_CP086372.1 RefSeq gene 866914 867663 . - . ID=gene-LNP58_RS04125;Name=LNP58_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04125;old_locus_tag=LNP58_04125 NZ_CP086372.1 Protein Homology CDS 866914 867663 . - 0 ID=cds-WP_011257904.1;Parent=gene-LNP58_RS04125;Dbxref=Genbank:WP_011257904.1;Name=WP_011257904.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305198.1;locus_tag=LNP58_RS04125;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_011257904.1;transl_table=11 NZ_CP086372.1 RefSeq gene 867684 868733 . + . ID=gene-LNP58_RS04130;Name=LNP58_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04130;old_locus_tag=LNP58_04130 NZ_CP086372.1 Protein Homology CDS 867684 868733 . + 0 ID=cds-WP_011407740.1;Parent=gene-LNP58_RS04130;Dbxref=Genbank:WP_011407740.1;Name=WP_011407740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050699.1;locus_tag=LNP58_RS04130;product=glycosyltransferase family 9 protein;protein_id=WP_011407740.1;transl_table=11 NZ_CP086372.1 RefSeq gene 868944 869348 . - . ID=gene-LNP58_RS04135;Name=LNP58_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04135;old_locus_tag=LNP58_04135 NZ_CP086372.1 Protein Homology CDS 868944 869348 . - 0 ID=cds-WP_011257902.1;Parent=gene-LNP58_RS04135;Dbxref=Genbank:WP_011257902.1;Name=WP_011257902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968982.1;locus_tag=LNP58_RS04135;product=DUF6165 family protein;protein_id=WP_011257902.1;transl_table=11 NZ_CP086372.1 RefSeq gene 869390 870145 . + . ID=gene-LNP58_RS04140;Name=LNP58_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04140;old_locus_tag=LNP58_04140 NZ_CP086372.1 GeneMarkS-2+ CDS 869390 870145 . + 0 ID=cds-WP_011257901.1;Parent=gene-LNP58_RS04140;Dbxref=Genbank:WP_011257901.1;Name=WP_011257901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04140;product=site-specific integrase;protein_id=WP_011257901.1;transl_table=11 NZ_CP086372.1 RefSeq gene 870244 871209 . - . ID=gene-LNP58_RS04145;Name=LNP58_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04145;old_locus_tag=LNP58_04145 NZ_CP086372.1 Protein Homology CDS 870244 871209 . - 0 ID=cds-WP_109182094.1;Parent=gene-LNP58_RS04145;Dbxref=Genbank:WP_109182094.1;Name=WP_109182094.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04145;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182094.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 871298 871849 . - . ID=gene-LNP58_RS04150;Name=LNP58_RS04150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04150;old_locus_tag=LNP58_04150;partial=true;pseudo=true;start_range=.,871298 NZ_CP086372.1 Protein Homology CDS 871298 871849 . - 0 ID=cds-LNP58_RS04150;Parent=gene-LNP58_RS04150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257196.1;locus_tag=LNP58_RS04150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,871298;transl_table=11 NZ_CP086372.1 RefSeq gene 871911 872090 . - . ID=gene-LNP58_RS04155;Name=LNP58_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04155;old_locus_tag=LNP58_04155 NZ_CP086372.1 Protein Homology CDS 871911 872090 . - 0 ID=cds-WP_228329689.1;Parent=gene-LNP58_RS04155;Dbxref=Genbank:WP_228329689.1;Name=WP_228329689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=LNP58_RS04155;product=PAAR domain-containing protein;protein_id=WP_228329689.1;transl_table=11 NZ_CP086372.1 RefSeq gene 872026 872172 . - . ID=gene-LNP58_RS04160;Name=LNP58_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04160;old_locus_tag=LNP58_04160 NZ_CP086372.1 Protein Homology CDS 872026 872172 . - 0 ID=cds-WP_012445919.1;Parent=gene-LNP58_RS04160;Dbxref=Genbank:WP_012445919.1;Name=WP_012445919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504125.1;locus_tag=LNP58_RS04160;product=membrane protein;protein_id=WP_012445919.1;transl_table=11 NZ_CP086372.1 RefSeq gene 872169 873866 . - . ID=gene-LNP58_RS04165;Name=LNP58_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04165;old_locus_tag=LNP58_04165 NZ_CP086372.1 Protein Homology CDS 872169 873866 . - 0 ID=cds-WP_044757078.1;Parent=gene-LNP58_RS04165;Dbxref=Genbank:WP_044757078.1;Name=WP_044757078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257197.1;locus_tag=LNP58_RS04165;product=DUF2875 family protein;protein_id=WP_044757078.1;transl_table=11 NZ_CP086372.1 RefSeq gene 873863 876013 . - . ID=gene-LNP58_RS04170;Name=LNP58_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04170;old_locus_tag=LNP58_04170 NZ_CP086372.1 Protein Homology CDS 873863 876013 . - 0 ID=cds-WP_069960070.1;Parent=gene-LNP58_RS04170;Dbxref=Genbank:WP_069960070.1;Name=WP_069960070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407734.1;locus_tag=LNP58_RS04170;product=DUF3274 domain-containing protein;protein_id=WP_069960070.1;transl_table=11 NZ_CP086372.1 RefSeq gene 876081 878804 . - . ID=gene-LNP58_RS04175;Name=LNP58_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04175;old_locus_tag=LNP58_04175 NZ_CP086372.1 Protein Homology CDS 876081 878804 . - 0 ID=cds-WP_082325231.1;Parent=gene-LNP58_RS04175;Dbxref=Genbank:WP_082325231.1;Name=WP_082325231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=LNP58_RS04175;product=type VI secretion system Vgr family protein;protein_id=WP_082325231.1;transl_table=11 NZ_CP086372.1 RefSeq gene 879200 879400 . - . ID=gene-LNP58_RS04180;Name=LNP58_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04180;old_locus_tag=LNP58_04180 NZ_CP086372.1 Protein Homology CDS 879200 879400 . - 0 ID=cds-WP_012445927.1;Parent=gene-LNP58_RS04180;Dbxref=Genbank:WP_012445927.1;Name=WP_012445927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303605.1;locus_tag=LNP58_RS04180;product=hypothetical protein;protein_id=WP_012445927.1;transl_table=11 NZ_CP086372.1 RefSeq gene 879499 879774 . - . ID=gene-LNP58_RS04185;Name=LNP58_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04185;old_locus_tag=LNP58_04185 NZ_CP086372.1 GeneMarkS-2+ CDS 879499 879774 . - 0 ID=cds-WP_011257892.1;Parent=gene-LNP58_RS04185;Dbxref=Genbank:WP_011257892.1;Name=WP_011257892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04185;product=DNA methyltransferase;protein_id=WP_011257892.1;transl_table=11 NZ_CP086372.1 RefSeq gene 880292 880921 . + . ID=gene-LNP58_RS04190;Name=LNP58_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04190;old_locus_tag=LNP58_04190 NZ_CP086372.1 GeneMarkS-2+ CDS 880292 880921 . + 0 ID=cds-WP_041181989.1;Parent=gene-LNP58_RS04190;Dbxref=Genbank:WP_041181989.1;Name=WP_041181989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04190;product=hypothetical protein;protein_id=WP_041181989.1;transl_table=11 NZ_CP086372.1 RefSeq gene 881460 881550 . - . ID=gene-LNP58_RS04195;Name=LNP58_RS04195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04195;old_locus_tag=LNP58_04195 NZ_CP086372.1 tRNAscan-SE tRNA 881460 881550 . - . ID=rna-LNP58_RS04195;Parent=gene-LNP58_RS04195;anticodon=(pos:complement(881514..881516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04195;product=tRNA-Ser NZ_CP086372.1 tRNAscan-SE exon 881460 881550 . - . ID=exon-LNP58_RS04195-1;Parent=rna-LNP58_RS04195;anticodon=(pos:complement(881514..881516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04195;product=tRNA-Ser NZ_CP086372.1 RefSeq gene 881747 882451 . + . ID=gene-LNP58_RS04200;Name=LNP58_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04200;old_locus_tag=LNP58_04200 NZ_CP086372.1 Protein Homology CDS 881747 882451 . + 0 ID=cds-WP_011257891.1;Parent=gene-LNP58_RS04200;Dbxref=Genbank:WP_011257891.1;Name=WP_011257891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483822.1;locus_tag=LNP58_RS04200;product=protein phosphatase 2C domain-containing protein;protein_id=WP_011257891.1;transl_table=11 NZ_CP086372.1 RefSeq gene 882756 882827 . - . ID=gene-LNP58_RS04205;Name=LNP58_RS04205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04205;old_locus_tag=LNP58_04205 NZ_CP086372.1 cmsearch ncRNA 882756 882827 . - . ID=rna-LNP58_RS04205;Parent=gene-LNP58_RS04205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04205;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 882756 882827 . - . ID=exon-LNP58_RS04205-1;Parent=rna-LNP58_RS04205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04205;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 882887 883621 . - . ID=gene-LNP58_RS04210;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LNP58_RS04210;old_locus_tag=LNP58_04210 NZ_CP086372.1 Protein Homology CDS 882887 883621 . - 0 ID=cds-WP_011257889.1;Parent=gene-LNP58_RS04210;Dbxref=Genbank:WP_011257889.1;Name=WP_011257889.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158127.1;locus_tag=LNP58_RS04210;product=DNA polymerase III subunit epsilon;protein_id=WP_011257889.1;transl_table=11 NZ_CP086372.1 RefSeq gene 883630 884082 . - . ID=gene-LNP58_RS04215;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LNP58_RS04215;old_locus_tag=LNP58_04215 NZ_CP086372.1 Protein Homology CDS 883630 884082 . - 0 ID=cds-WP_011257888.1;Parent=gene-LNP58_RS04215;Dbxref=Genbank:WP_011257888.1;Name=WP_011257888.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158126.1;locus_tag=LNP58_RS04215;product=ribonuclease HI;protein_id=WP_011257888.1;transl_table=11 NZ_CP086372.1 RefSeq gene 884110 884766 . - . ID=gene-LNP58_RS04220;Name=LNP58_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04220;old_locus_tag=LNP58_04220 NZ_CP086372.1 Protein Homology CDS 884110 884766 . - 0 ID=cds-WP_011257887.1;Parent=gene-LNP58_RS04220;Dbxref=Genbank:WP_011257887.1;Name=WP_011257887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346590.1;locus_tag=LNP58_RS04220;product=hypothetical protein;protein_id=WP_011257887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 884779 885546 . + . ID=gene-LNP58_RS04225;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LNP58_RS04225;old_locus_tag=LNP58_04225 NZ_CP086372.1 Protein Homology CDS 884779 885546 . + 0 ID=cds-WP_011257886.1;Parent=gene-LNP58_RS04225;Dbxref=Genbank:WP_011257886.1;Name=WP_011257886.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257886.1;locus_tag=LNP58_RS04225;product=hydroxyacylglutathione hydrolase;protein_id=WP_011257886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 885543 886721 . + . ID=gene-LNP58_RS04230;Name=LNP58_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04230;old_locus_tag=LNP58_04230 NZ_CP086372.1 Protein Homology CDS 885543 886721 . + 0 ID=cds-WP_011407729.1;Parent=gene-LNP58_RS04230;Dbxref=Genbank:WP_011407729.1;Name=WP_011407729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112895.1;locus_tag=LNP58_RS04230;product=lytic transglycosylase domain-containing protein;protein_id=WP_011407729.1;transl_table=11 NZ_CP086372.1 RefSeq gene 887427 889397 . - . ID=gene-LNP58_RS04235;Name=LNP58_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04235;old_locus_tag=LNP58_04235 NZ_CP086372.1 Protein Homology CDS 887427 889397 . - 0 ID=cds-WP_011407728.1;Parent=gene-LNP58_RS04235;Dbxref=Genbank:WP_011407728.1;Name=WP_011407728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920425.1;locus_tag=LNP58_RS04235;product=peptidylprolyl isomerase;protein_id=WP_011407728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 889867 889943 . - . ID=gene-LNP58_RS04240;Name=LNP58_RS04240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04240;old_locus_tag=LNP58_04240 NZ_CP086372.1 tRNAscan-SE tRNA 889867 889943 . - . ID=rna-LNP58_RS04240;Parent=gene-LNP58_RS04240;anticodon=(pos:complement(889907..889909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04240;product=tRNA-Asp NZ_CP086372.1 tRNAscan-SE exon 889867 889943 . - . ID=exon-LNP58_RS04240-1;Parent=rna-LNP58_RS04240;anticodon=(pos:complement(889907..889909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04240;product=tRNA-Asp NZ_CP086372.1 RefSeq gene 890038 890114 . - . ID=gene-LNP58_RS04245;Name=LNP58_RS04245;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04245;old_locus_tag=LNP58_04245 NZ_CP086372.1 tRNAscan-SE tRNA 890038 890114 . - . ID=rna-LNP58_RS04245;Parent=gene-LNP58_RS04245;anticodon=(pos:complement(890078..890080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04245;product=tRNA-Asp NZ_CP086372.1 tRNAscan-SE exon 890038 890114 . - . ID=exon-LNP58_RS04245-1;Parent=rna-LNP58_RS04245;anticodon=(pos:complement(890078..890080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04245;product=tRNA-Asp NZ_CP086372.1 RefSeq gene 890143 890217 . - . ID=gene-LNP58_RS04250;Name=LNP58_RS04250;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04250;old_locus_tag=LNP58_04250 NZ_CP086372.1 tRNAscan-SE tRNA 890143 890217 . - . ID=rna-LNP58_RS04250;Parent=gene-LNP58_RS04250;anticodon=(pos:complement(890183..890185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04250;product=tRNA-Val NZ_CP086372.1 tRNAscan-SE exon 890143 890217 . - . ID=exon-LNP58_RS04250-1;Parent=rna-LNP58_RS04250;anticodon=(pos:complement(890183..890185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04250;product=tRNA-Val NZ_CP086372.1 RefSeq gene 890229 890501 . - . ID=gene-LNP58_RS04255;Name=LNP58_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04255;old_locus_tag=LNP58_04255 NZ_CP086372.1 Protein Homology CDS 890229 890501 . - 0 ID=cds-WP_002806049.1;Parent=gene-LNP58_RS04255;Dbxref=Genbank:WP_002806049.1;Name=WP_002806049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904732.1;locus_tag=LNP58_RS04255;product=HU family DNA-binding protein;protein_id=WP_002806049.1;transl_table=11 NZ_CP086372.1 RefSeq gene 890715 893186 . - . ID=gene-LNP58_RS04260;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LNP58_RS04260;old_locus_tag=LNP58_04260 NZ_CP086372.1 Protein Homology CDS 890715 893186 . - 0 ID=cds-WP_012445937.1;Parent=gene-LNP58_RS04260;Dbxref=Genbank:WP_012445937.1;Name=WP_012445937.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451748.1;locus_tag=LNP58_RS04260;product=endopeptidase La;protein_id=WP_012445937.1;transl_table=11 NZ_CP086372.1 RefSeq gene 893330 894616 . - . ID=gene-LNP58_RS04265;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LNP58_RS04265;old_locus_tag=LNP58_04265 NZ_CP086372.1 Protein Homology CDS 893330 894616 . - 0 ID=cds-WP_011257881.1;Parent=gene-LNP58_RS04265;Dbxref=Genbank:WP_011257881.1;Name=WP_011257881.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451747.1;locus_tag=LNP58_RS04265;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_011257881.1;transl_table=11 NZ_CP086372.1 RefSeq gene 894741 895367 . - . ID=gene-LNP58_RS04270;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LNP58_RS04270;old_locus_tag=LNP58_04270 NZ_CP086372.1 Protein Homology CDS 894741 895367 . - 0 ID=cds-WP_002806026.1;Parent=gene-LNP58_RS04270;Dbxref=Genbank:WP_002806026.1;Name=WP_002806026.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806026.1;locus_tag=LNP58_RS04270;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002806026.1;transl_table=11 NZ_CP086372.1 RefSeq gene 895460 896752 . - . ID=gene-LNP58_RS04275;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LNP58_RS04275;old_locus_tag=LNP58_04275 NZ_CP086372.1 Protein Homology CDS 895460 896752 . - 0 ID=cds-WP_012445939.1;Parent=gene-LNP58_RS04275;Dbxref=Genbank:WP_012445939.1;Name=WP_012445939.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378367.1;locus_tag=LNP58_RS04275;product=trigger factor;protein_id=WP_012445939.1;transl_table=11 NZ_CP086372.1 RefSeq gene 896955 897039 . - . ID=gene-LNP58_RS04280;Name=LNP58_RS04280;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04280;old_locus_tag=LNP58_04280 NZ_CP086372.1 tRNAscan-SE tRNA 896955 897039 . - . ID=rna-LNP58_RS04280;Parent=gene-LNP58_RS04280;anticodon=(pos:complement(897003..897005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04280;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 896955 897039 . - . ID=exon-LNP58_RS04280-1;Parent=rna-LNP58_RS04280;anticodon=(pos:complement(897003..897005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04280;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 897363 898739 . - . ID=gene-LNP58_RS04285;Name=LNP58_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04285;old_locus_tag=LNP58_04285 NZ_CP086372.1 Protein Homology CDS 897363 898739 . - 0 ID=cds-WP_069964507.1;Parent=gene-LNP58_RS04285;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS04285;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 898882 899163 . - . ID=gene-LNP58_RS04290;Name=LNP58_RS04290;end_range=899163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04290;old_locus_tag=LNP58_04290;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 898882 899163 . - 0 ID=cds-LNP58_RS04290;Parent=gene-LNP58_RS04290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=899163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS04290;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 899261 899586 . - . ID=gene-LNP58_RS04295;Name=LNP58_RS04295;end_range=899586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04295;old_locus_tag=LNP58_04295;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 899261 899586 . - 0 ID=cds-LNP58_RS04295;Parent=gene-LNP58_RS04295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=899586,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011239931.1;locus_tag=LNP58_RS04295;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 899614 900717 . - . ID=gene-LNP58_RS04300;Name=LNP58_RS04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04300;old_locus_tag=LNP58_04300;pseudo=true NZ_CP086372.1 Protein Homology CDS 899614 900717 . - 0 ID=cds-LNP58_RS04300;Parent=gene-LNP58_RS04300;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558183.1;locus_tag=LNP58_RS04300;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 900964 901039 . - . ID=gene-LNP58_RS04305;Name=LNP58_RS04305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04305;old_locus_tag=LNP58_04305 NZ_CP086372.1 tRNAscan-SE tRNA 900964 901039 . - . ID=rna-LNP58_RS04305;Parent=gene-LNP58_RS04305;anticodon=(pos:complement(901004..901006));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04305;product=tRNA-Lys NZ_CP086372.1 tRNAscan-SE exon 900964 901039 . - . ID=exon-LNP58_RS04305-1;Parent=rna-LNP58_RS04305;anticodon=(pos:complement(901004..901006));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04305;product=tRNA-Lys NZ_CP086372.1 RefSeq gene 901133 901209 . - . ID=gene-LNP58_RS04310;Name=LNP58_RS04310;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04310;old_locus_tag=LNP58_04310 NZ_CP086372.1 tRNAscan-SE tRNA 901133 901209 . - . ID=rna-LNP58_RS04310;Parent=gene-LNP58_RS04310;anticodon=(pos:complement(901173..901175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04310;product=tRNA-His NZ_CP086372.1 tRNAscan-SE exon 901133 901209 . - . ID=exon-LNP58_RS04310-1;Parent=rna-LNP58_RS04310;anticodon=(pos:complement(901173..901175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04310;product=tRNA-His NZ_CP086372.1 RefSeq gene 901242 901318 . - . ID=gene-LNP58_RS04315;Name=LNP58_RS04315;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04315;old_locus_tag=LNP58_04315 NZ_CP086372.1 tRNAscan-SE tRNA 901242 901318 . - . ID=rna-LNP58_RS04315;Parent=gene-LNP58_RS04315;anticodon=(pos:complement(901282..901284));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04315;product=tRNA-Arg NZ_CP086372.1 tRNAscan-SE exon 901242 901318 . - . ID=exon-LNP58_RS04315-1;Parent=rna-LNP58_RS04315;anticodon=(pos:complement(901282..901284));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04315;product=tRNA-Arg NZ_CP086372.1 RefSeq gene 901361 901437 . - . ID=gene-LNP58_RS04320;Name=LNP58_RS04320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04320;old_locus_tag=LNP58_04320 NZ_CP086372.1 tRNAscan-SE tRNA 901361 901437 . - . ID=rna-LNP58_RS04320;Parent=gene-LNP58_RS04320;anticodon=(pos:complement(901401..901403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04320;product=tRNA-Pro NZ_CP086372.1 tRNAscan-SE exon 901361 901437 . - . ID=exon-LNP58_RS04320-1;Parent=rna-LNP58_RS04320;anticodon=(pos:complement(901401..901403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04320;product=tRNA-Pro NZ_CP086372.1 RefSeq gene 901589 902350 . + . ID=gene-LNP58_RS04325;Name=LNP58_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04325;old_locus_tag=LNP58_04325 NZ_CP086372.1 Protein Homology CDS 901589 902350 . + 0 ID=cds-WP_011257875.1;Parent=gene-LNP58_RS04325;Dbxref=Genbank:WP_011257875.1;Name=WP_011257875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927840.1;locus_tag=LNP58_RS04325;product=Bax inhibitor-1/YccA family protein;protein_id=WP_011257875.1;transl_table=11 NZ_CP086372.1 RefSeq gene 902494 903501 . - . ID=gene-LNP58_RS04330;Name=LNP58_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04330;old_locus_tag=LNP58_04330 NZ_CP086372.1 Protein Homology CDS 902494 903501 . - 0 ID=cds-WP_011257874.1;Parent=gene-LNP58_RS04330;Dbxref=Genbank:WP_011257874.1;Name=WP_011257874.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=LNP58_RS04330;product=isocitrate dehydrogenase;protein_id=WP_011257874.1;transl_table=11 NZ_CP086372.1 RefSeq gene 903765 904730 . + . ID=gene-LNP58_RS04335;Name=LNP58_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04335;old_locus_tag=LNP58_04335 NZ_CP086372.1 Protein Homology CDS 903765 904730 . + 0 ID=cds-WP_109181948.1;Parent=gene-LNP58_RS04335;Dbxref=Genbank:WP_109181948.1;Name=WP_109181948.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04335;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181948.1;transl_table=11 NZ_CP086372.1 RefSeq gene 904731 905484 . - . ID=gene-LNP58_RS04340;Name=LNP58_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04340;old_locus_tag=LNP58_04340 NZ_CP086372.1 Protein Homology CDS 905213 905484 . - 0 ID=cds-WP_109182091.1;Parent=gene-LNP58_RS04340;Dbxref=Genbank:WP_109182091.1;Name=WP_109182091.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS04340;product=IS5 family transposase;protein_id=WP_109182091.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 904731 905214 . - 1 ID=cds-WP_109182091.1;Parent=gene-LNP58_RS04340;Dbxref=Genbank:WP_109182091.1;Name=WP_109182091.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS04340;product=IS5 family transposase;protein_id=WP_109182091.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 905526 906272 . - . ID=gene-LNP58_RS04345;Name=LNP58_RS04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04345;old_locus_tag=LNP58_04345;partial=true;pseudo=true;start_range=.,905526 NZ_CP086372.1 Protein Homology CDS 905526 906272 . - 0 ID=cds-LNP58_RS04345;Parent=gene-LNP58_RS04345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS04345;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,905526;transl_table=11 NZ_CP086372.1 RefSeq gene 906723 907310 . + . ID=gene-LNP58_RS04350;Name=LNP58_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04350;old_locus_tag=LNP58_04350 NZ_CP086372.1 GeneMarkS-2+ CDS 906723 907310 . + 0 ID=cds-WP_011407723.1;Parent=gene-LNP58_RS04350;Dbxref=Genbank:WP_011407723.1;Name=WP_011407723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04350;product=TonB-dependent receptor;protein_id=WP_011407723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 907304 908035 . + . ID=gene-LNP58_RS04355;Name=LNP58_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04355;old_locus_tag=LNP58_04355 NZ_CP086372.1 Protein Homology CDS 907304 908035 . + 0 ID=cds-WP_049756327.1;Parent=gene-LNP58_RS04355;Dbxref=Genbank:WP_049756327.1;Name=WP_049756327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445973.1;locus_tag=LNP58_RS04355;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_049756327.1;transl_table=11 NZ_CP086372.1 RefSeq gene 908068 908831 . + . ID=gene-LNP58_RS04360;Name=LNP58_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04360;old_locus_tag=LNP58_04360 NZ_CP086372.1 Protein Homology CDS 908068 908383 . + 0 ID=cds-WP_109182012.1;Parent=gene-LNP58_RS04360;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS04360;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 908383 908831 . + 2 ID=cds-WP_109182012.1;Parent=gene-LNP58_RS04360;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS04360;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 908903 909067 . + . ID=gene-LNP58_RS04365;Name=LNP58_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04365;old_locus_tag=LNP58_04365 NZ_CP086372.1 Protein Homology CDS 908903 909067 . + 0 ID=cds-WP_229001937.1;Parent=gene-LNP58_RS04365;Dbxref=Genbank:WP_229001937.1;Name=WP_229001937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027704.2;locus_tag=LNP58_RS04365;product=DUF4996 domain-containing protein;protein_id=WP_229001937.1;transl_table=11 NZ_CP086372.1 RefSeq gene 909616 910077 . + . ID=gene-LNP58_RS04370;Name=LNP58_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04370;old_locus_tag=LNP58_04370 NZ_CP086372.1 Protein Homology CDS 909616 910077 . + 0 ID=cds-WP_011407721.1;Parent=gene-LNP58_RS04370;Dbxref=Genbank:WP_011407721.1;Name=WP_011407721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470606.1;locus_tag=LNP58_RS04370;product=cell wall hydrolase;protein_id=WP_011407721.1;transl_table=11 NZ_CP086372.1 RefSeq gene 910338 911306 . + . ID=gene-LNP58_RS04375;Name=LNP58_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04375;old_locus_tag=LNP58_04375 NZ_CP086372.1 Protein Homology CDS 910338 911306 . + 0 ID=cds-WP_011258802.1-5;Parent=gene-LNP58_RS04375;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS04375;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 911421 912605 . - . ID=gene-LNP58_RS04380;Name=LNP58_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04380;old_locus_tag=LNP58_04380 NZ_CP086372.1 Protein Homology CDS 911421 912605 . - 0 ID=cds-WP_069959738.1;Parent=gene-LNP58_RS04380;Dbxref=Genbank:WP_069959738.1;Name=WP_069959738.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=LNP58_RS04380;product=IS701 family transposase;protein_id=WP_069959738.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 912694 913908 . - . ID=gene-LNP58_RS04385;Name=LNP58_RS04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04385;old_locus_tag=LNP58_04385;pseudo=true NZ_CP086372.1 Protein Homology CDS 912694 913908 . - 0 ID=cds-LNP58_RS04385;Parent=gene-LNP58_RS04385;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS04385;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 913975 914738 . + . ID=gene-LNP58_RS04390;Name=LNP58_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04390;old_locus_tag=LNP58_04390 NZ_CP086372.1 Protein Homology CDS 913975 914290 . + 0 ID=cds-WP_094187735.1;Parent=gene-LNP58_RS04390;Dbxref=Genbank:WP_094187735.1;Name=WP_094187735.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS04390;product=IS5 family transposase;protein_id=WP_094187735.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 914290 914738 . + 2 ID=cds-WP_094187735.1;Parent=gene-LNP58_RS04390;Dbxref=Genbank:WP_094187735.1;Name=WP_094187735.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS04390;product=IS5 family transposase;protein_id=WP_094187735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 914806 916356 . - . ID=gene-LNP58_RS04395;Name=LNP58_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04395;old_locus_tag=LNP58_04395 NZ_CP086372.1 Protein Homology CDS 914806 916356 . - 0 ID=cds-WP_012445996.1;Parent=gene-LNP58_RS04395;Dbxref=Genbank:WP_012445996.1;Name=WP_012445996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445996.1;locus_tag=LNP58_RS04395;product=hypothetical protein;protein_id=WP_012445996.1;transl_table=11 NZ_CP086372.1 RefSeq gene 916685 917650 . - . ID=gene-LNP58_RS04400;Name=LNP58_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04400;old_locus_tag=LNP58_04400 NZ_CP086372.1 Protein Homology CDS 916685 917650 . - 0 ID=cds-WP_109182121.1;Parent=gene-LNP58_RS04400;Dbxref=Genbank:WP_109182121.1;Name=WP_109182121.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04400;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182121.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 917800 918696 . + . ID=gene-LNP58_RS04405;Name=LNP58_RS04405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04405;old_locus_tag=LNP58_04405;pseudo=true NZ_CP086372.1 Protein Homology CDS 917800 918696 . + 0 ID=cds-LNP58_RS04405;Parent=gene-LNP58_RS04405;Note=internal stop;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302971.1;locus_tag=LNP58_RS04405;product=pseudouridine synthase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 918713 919636 . - . ID=gene-LNP58_RS04410;Name=LNP58_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04410;old_locus_tag=LNP58_04410 NZ_CP086372.1 Protein Homology CDS 918713 919636 . - 0 ID=cds-WP_041182948.1;Parent=gene-LNP58_RS04410;Dbxref=Genbank:WP_041182948.1;Name=WP_041182948.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505222.1;locus_tag=LNP58_RS04410;product=IS30 family transposase;protein_id=WP_041182948.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 919661 920238 . + . ID=gene-LNP58_RS04415;Name=LNP58_RS04415;end_range=920238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04415;old_locus_tag=LNP58_04415;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 919661 920238 . + 0 ID=cds-LNP58_RS04415;Parent=gene-LNP58_RS04415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=920238,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS04415;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 920382 921701 . + . ID=gene-LNP58_RS04420;Name=LNP58_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04420;old_locus_tag=LNP58_04420 NZ_CP086372.1 Protein Homology CDS 920382 921701 . + 0 ID=cds-WP_109182089.1;Parent=gene-LNP58_RS04420;Dbxref=Genbank:WP_109182089.1;Name=WP_109182089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS04420;product=IS701-like element ISXo15 family transposase;protein_id=WP_109182089.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 921811 922620 . + . ID=gene-LNP58_RS04425;Name=LNP58_RS04425;end_range=922620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04425;old_locus_tag=LNP58_04425;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 921811 922620 . + 0 ID=cds-LNP58_RS04425;Parent=gene-LNP58_RS04425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=922620,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS04425;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 922684 923919 . + . ID=gene-LNP58_RS04430;Name=LNP58_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04430;old_locus_tag=LNP58_04430 NZ_CP086372.1 Protein Homology CDS 922684 923919 . + 0 ID=cds-WP_011407713.1;Parent=gene-LNP58_RS04430;Dbxref=Genbank:WP_011407713.1;Name=WP_011407713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS04430;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011407713.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 923926 924204 . + . ID=gene-LNP58_RS04435;Name=LNP58_RS04435;end_range=924204,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04435;partial=true;pseudo=true;start_range=.,923926 NZ_CP086372.1 Protein Homology CDS 923926 924204 . + 0 ID=cds-LNP58_RS04435;Parent=gene-LNP58_RS04435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=924204,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS04435;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,923926;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 924213 925187 . - . ID=gene-LNP58_RS04440;Name=LNP58_RS04440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04440;old_locus_tag=LNP58_04435;pseudo=true NZ_CP086372.1 Protein Homology CDS 924213 925187 . - 0 ID=cds-LNP58_RS04440;Parent=gene-LNP58_RS04440;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557986.1;locus_tag=LNP58_RS04440;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 925311 926276 . + . ID=gene-LNP58_RS04445;Name=LNP58_RS04445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04445;old_locus_tag=LNP58_04440;pseudo=true NZ_CP086372.1 Protein Homology CDS 925311 926276 . + 0 ID=cds-LNP58_RS04445;Parent=gene-LNP58_RS04445;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04445;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 926346 926651 . + . ID=gene-LNP58_RS04450;Name=LNP58_RS04450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04450;old_locus_tag=LNP58_04445;partial=true;pseudo=true;start_range=.,926346 NZ_CP086372.1 Protein Homology CDS 926346 926651 . + 0 ID=cds-LNP58_RS04450;Parent=gene-LNP58_RS04450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS04450;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,926346;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 926673 927224 . + . ID=gene-LNP58_RS04455;Name=LNP58_RS04455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04455;old_locus_tag=LNP58_04450;partial=true;pseudo=true;start_range=.,926673 NZ_CP086372.1 Protein Homology CDS 926673 927224 . + 0 ID=cds-LNP58_RS04455;Parent=gene-LNP58_RS04455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS04455;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,926673;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 927418 927534 . + . ID=gene-LNP58_RS04460;Name=LNP58_RS04460;end_range=927534,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04460;old_locus_tag=LNP58_04455;partial=true;pseudo=true;start_range=.,927418 NZ_CP086372.1 Protein Homology CDS 927418 927534 . + 0 ID=cds-LNP58_RS04460;Parent=gene-LNP58_RS04460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=927534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711660.1;locus_tag=LNP58_RS04460;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,927418;transl_table=11 NZ_CP086372.1 RefSeq gene 927575 928951 . - . ID=gene-LNP58_RS04465;Name=LNP58_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04465;old_locus_tag=LNP58_04460 NZ_CP086372.1 Protein Homology CDS 927575 928951 . - 0 ID=cds-WP_069964507.1-2;Parent=gene-LNP58_RS04465;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS04465;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 929228 930118 . + . ID=gene-LNP58_RS04470;Name=LNP58_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04470;old_locus_tag=LNP58_04465 NZ_CP086372.1 Protein Homology CDS 929228 930118 . + 0 ID=cds-WP_011407710.1;Parent=gene-LNP58_RS04470;Dbxref=Genbank:WP_011407710.1;Name=WP_011407710.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901112.1;locus_tag=LNP58_RS04470;product=trypsin-like serine protease;protein_id=WP_011407710.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 930145 930717 . - . ID=gene-LNP58_RS04475;Name=LNP58_RS04475;end_range=930717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04475;old_locus_tag=LNP58_04470;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 930145 930717 . - 0 ID=cds-LNP58_RS04475;Parent=gene-LNP58_RS04475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=930717,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=LNP58_RS04475;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 930732 931967 . - . ID=gene-LNP58_RS04480;Name=LNP58_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04480;old_locus_tag=LNP58_04475 NZ_CP086372.1 Protein Homology CDS 930732 931967 . - 0 ID=cds-WP_011407713.1-2;Parent=gene-LNP58_RS04480;Dbxref=Genbank:WP_011407713.1;Name=WP_011407713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS04480;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011407713.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 932031 932447 . - . ID=gene-LNP58_RS04485;Name=LNP58_RS04485;end_range=932447,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04485;old_locus_tag=LNP58_04480;partial=true;pseudo=true;start_range=.,932031 NZ_CP086372.1 Protein Homology CDS 932031 932447 . - 0 ID=cds-LNP58_RS04485;Parent=gene-LNP58_RS04485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=932447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS04485;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,932031;transl_table=11 NZ_CP086372.1 RefSeq gene 932481 933523 . - . ID=gene-LNP58_RS04490;Name=LNP58_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04490;old_locus_tag=LNP58_04485 NZ_CP086372.1 Protein Homology CDS 933328 933523 . - 0 ID=cds-WP_229001938.1;Parent=gene-LNP58_RS04490;Dbxref=Genbank:WP_229001938.1;Name=WP_229001938.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS04490;product=IS3 family transposase;protein_id=WP_229001938.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 932481 933328 . - 2 ID=cds-WP_229001938.1;Parent=gene-LNP58_RS04490;Dbxref=Genbank:WP_229001938.1;Name=WP_229001938.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS04490;product=IS3 family transposase;protein_id=WP_229001938.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 933653 934036 . - . ID=gene-LNP58_RS04495;Name=LNP58_RS04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04495;old_locus_tag=LNP58_04490;partial=true;pseudo=true;start_range=.,933653 NZ_CP086372.1 Protein Homology CDS 933653 934036 . - 0 ID=cds-LNP58_RS04495;Parent=gene-LNP58_RS04495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=LNP58_RS04495;partial=true;product=transposase;pseudo=true;start_range=.,933653;transl_table=11 NZ_CP086372.1 RefSeq gene 934290 934808 . + . ID=gene-LNP58_RS04500;Name=LNP58_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04500;old_locus_tag=LNP58_04495 NZ_CP086372.1 Protein Homology CDS 934290 934808 . + 0 ID=cds-WP_011407706.1;Parent=gene-LNP58_RS04500;Dbxref=Genbank:WP_011407706.1;Name=WP_011407706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993394.1;locus_tag=LNP58_RS04500;product=disulfide bond formation protein B;protein_id=WP_011407706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 935337 937460 . - . ID=gene-LNP58_RS04505;Name=LNP58_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04505;old_locus_tag=LNP58_04500 NZ_CP086372.1 Protein Homology CDS 935337 937460 . - 0 ID=cds-WP_011257842.1;Parent=gene-LNP58_RS04505;Dbxref=Genbank:WP_011257842.1;Name=WP_011257842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089489.1;locus_tag=LNP58_RS04505;product=TonB-dependent receptor;protein_id=WP_011257842.1;transl_table=11 NZ_CP086372.1 RefSeq gene 937708 939090 . + . ID=gene-LNP58_RS04510;Name=LNP58_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04510;old_locus_tag=LNP58_04505 NZ_CP086372.1 Protein Homology CDS 937708 939090 . + 0 ID=cds-WP_011257841.1;Parent=gene-LNP58_RS04510;Dbxref=Genbank:WP_011257841.1;Name=WP_011257841.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257841.1;locus_tag=LNP58_RS04510;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=WP_011257841.1;transl_table=11 NZ_CP086372.1 RefSeq gene 939191 940318 . + . ID=gene-LNP58_RS04515;Name=LNP58_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04515;old_locus_tag=LNP58_04510 NZ_CP086372.1 Protein Homology CDS 939191 940318 . + 0 ID=cds-WP_011257840.1;Parent=gene-LNP58_RS04515;Dbxref=Genbank:WP_011257840.1;Name=WP_011257840.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156225.1;locus_tag=LNP58_RS04515;product=mechanosensitive ion channel;protein_id=WP_011257840.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 940469 941137 . - . ID=gene-LNP58_RS04520;Name=LNP58_RS04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04520;old_locus_tag=LNP58_04515;partial=true;pseudo=true;start_range=.,940469 NZ_CP086372.1 Protein Homology CDS 940469 941137 . - 0 ID=cds-LNP58_RS04520;Parent=gene-LNP58_RS04520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156226.1;locus_tag=LNP58_RS04520;partial=true;product=amidase family protein;pseudo=true;start_range=.,940469;transl_table=11 NZ_CP086372.1 RefSeq gene 941241 941660 . - . ID=gene-LNP58_RS04525;Name=LNP58_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04525;old_locus_tag=LNP58_04520 NZ_CP086372.1 Protein Homology CDS 941241 941660 . - 0 ID=cds-WP_011257838.1;Parent=gene-LNP58_RS04525;Dbxref=Genbank:WP_011257838.1;Name=WP_011257838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161510.1;locus_tag=LNP58_RS04525;product=DUF2127 domain-containing protein;protein_id=WP_011257838.1;transl_table=11 NZ_CP086372.1 RefSeq gene 941730 943559 . - . ID=gene-LNP58_RS04530;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LNP58_RS04530;old_locus_tag=LNP58_04525 NZ_CP086372.1 Protein Homology CDS 941730 943559 . - 0 ID=cds-WP_011257837.1;Parent=gene-LNP58_RS04530;Dbxref=Genbank:WP_011257837.1;Name=WP_011257837.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904579.1;locus_tag=LNP58_RS04530;product=translational GTPase TypA;protein_id=WP_011257837.1;transl_table=11 NZ_CP086372.1 RefSeq gene 943804 944298 . + . ID=gene-LNP58_RS04535;Name=LNP58_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04535;old_locus_tag=LNP58_04530 NZ_CP086372.1 Protein Homology CDS 943804 944298 . + 0 ID=cds-WP_011257836.1;Parent=gene-LNP58_RS04535;Dbxref=Genbank:WP_011257836.1;Name=WP_011257836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993409.1;locus_tag=LNP58_RS04535;product=peptidylprolyl isomerase;protein_id=WP_011257836.1;transl_table=11 NZ_CP086372.1 RefSeq gene 944414 945400 . + . ID=gene-LNP58_RS04540;Name=LNP58_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04540;old_locus_tag=LNP58_04535 NZ_CP086372.1 Protein Homology CDS 944414 945400 . + 0 ID=cds-WP_011257835.1;Parent=gene-LNP58_RS04540;Dbxref=Genbank:WP_011257835.1;Name=WP_011257835.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439107.1;locus_tag=LNP58_RS04540;product=malate dehydrogenase;protein_id=WP_011257835.1;transl_table=11 NZ_CP086372.1 RefSeq gene 945483 946097 . - . ID=gene-LNP58_RS04545;Name=LNP58_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04545;old_locus_tag=LNP58_04540 NZ_CP086372.1 Protein Homology CDS 945483 946097 . - 0 ID=cds-WP_011257834.1;Parent=gene-LNP58_RS04545;Dbxref=Genbank:WP_011257834.1;Name=WP_011257834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486641.1;locus_tag=LNP58_RS04545;product=glutathione binding-like protein;protein_id=WP_011257834.1;transl_table=11 NZ_CP086372.1 RefSeq gene 946339 947137 . + . ID=gene-LNP58_RS04550;Name=LNP58_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04550;old_locus_tag=LNP58_04545 NZ_CP086372.1 Protein Homology CDS 946339 946610 . + 0 ID=cds-WP_155296460.1;Parent=gene-LNP58_RS04550;Dbxref=Genbank:WP_155296460.1;Name=WP_155296460.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS04550;product=IS5 family transposase;protein_id=WP_155296460.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 946609 947137 . + 1 ID=cds-WP_155296460.1;Parent=gene-LNP58_RS04550;Dbxref=Genbank:WP_155296460.1;Name=WP_155296460.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS04550;product=IS5 family transposase;protein_id=WP_155296460.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 947147 947802 . + . ID=gene-LNP58_RS04555;Name=LNP58_RS04555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04555;old_locus_tag=LNP58_04550;partial=true;pseudo=true;start_range=.,947147 NZ_CP086372.1 Protein Homology CDS 947147 947802 . + 0 ID=cds-LNP58_RS04555;Parent=gene-LNP58_RS04555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS04555;partial=true;product=transposase;pseudo=true;start_range=.,947147;transl_table=11 NZ_CP086372.1 RefSeq gene 948109 948993 . - . ID=gene-LNP58_RS04560;Name=LNP58_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04560;old_locus_tag=LNP58_04555 NZ_CP086372.1 Protein Homology CDS 948109 948993 . - 0 ID=cds-WP_011257831.1;Parent=gene-LNP58_RS04560;Dbxref=Genbank:WP_011257831.1;Name=WP_011257831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364428.1;locus_tag=LNP58_RS04560;product=bestrophin family ion channel;protein_id=WP_011257831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 949140 949736 . - . ID=gene-LNP58_RS04565;Name=LNP58_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04565;old_locus_tag=LNP58_04560 NZ_CP086372.1 Protein Homology CDS 949140 949736 . - 0 ID=cds-WP_027703752.1;Parent=gene-LNP58_RS04565;Dbxref=Genbank:WP_027703752.1;Name=WP_027703752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305271.1;locus_tag=LNP58_RS04565;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_027703752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 949736 951103 . - . ID=gene-LNP58_RS04570;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LNP58_RS04570;old_locus_tag=LNP58_04565 NZ_CP086372.1 Protein Homology CDS 949736 951103 . - 0 ID=cds-WP_171970794.1;Parent=gene-LNP58_RS04570;Dbxref=Genbank:WP_171970794.1;Name=WP_171970794.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164849.1;locus_tag=LNP58_RS04570;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_171970794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 951461 952024 . - . ID=gene-LNP58_RS04575;Name=LNP58_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04575;old_locus_tag=LNP58_04570 NZ_CP086372.1 Protein Homology CDS 951461 952024 . - 0 ID=cds-WP_011257828.1;Parent=gene-LNP58_RS04575;Dbxref=Genbank:WP_011257828.1;Name=WP_011257828.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364422.1;locus_tag=LNP58_RS04575;product=adenylate kinase;protein_id=WP_011257828.1;transl_table=11 NZ_CP086372.1 RefSeq gene 952184 953440 . + . ID=gene-LNP58_RS04580;Name=LNP58_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04580;old_locus_tag=LNP58_04575 NZ_CP086372.1 Protein Homology CDS 952184 953440 . + 0 ID=cds-WP_011257827.1;Parent=gene-LNP58_RS04580;Dbxref=Genbank:WP_011257827.1;Name=WP_011257827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504490.1;locus_tag=LNP58_RS04580;product=6-phosphofructokinase;protein_id=WP_011257827.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 953731 953922 . + . ID=gene-LNP58_RS04585;Name=LNP58_RS04585;end_range=953922,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04585;old_locus_tag=LNP58_04580;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 953731 953922 . + 0 ID=cds-LNP58_RS04585;Parent=gene-LNP58_RS04585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=953922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS04585;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 954011 954976 . + . ID=gene-LNP58_RS04590;Name=LNP58_RS04590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04590;old_locus_tag=LNP58_04585;pseudo=true NZ_CP086372.1 Protein Homology CDS 954011 954976 . + 0 ID=cds-LNP58_RS04590;Parent=gene-LNP58_RS04590;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04590;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 955120 955644 . - . ID=gene-LNP58_RS04595;Name=LNP58_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04595;old_locus_tag=LNP58_04590 NZ_CP086372.1 Protein Homology CDS 955120 955644 . - 0 ID=cds-WP_011257823.1;Parent=gene-LNP58_RS04595;Dbxref=Genbank:WP_011257823.1;Name=WP_011257823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348509.1;locus_tag=LNP58_RS04595;product=hypothetical protein;protein_id=WP_011257823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 955893 956069 . + . ID=gene-LNP58_RS04600;Name=LNP58_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04600;old_locus_tag=LNP58_04595 NZ_CP086372.1 Protein Homology CDS 955893 956069 . + 0 ID=cds-WP_187359573.1;Parent=gene-LNP58_RS04600;Dbxref=Genbank:WP_187359573.1;Name=WP_187359573.1;Ontology_term=GO:1902600,GO:0004427,GO:0009678,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic diphosphate phosphatase activity|0004427||IEA,pyrophosphate hydrolysis-driven proton transmembrane transporter activity|0009678||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF015019.2;locus_tag=LNP58_RS04600;product=sodium/proton-translocating pyrophosphatase;protein_id=WP_187359573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 956066 957031 . - . ID=gene-LNP58_RS04605;Name=LNP58_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04605;old_locus_tag=LNP58_04600 NZ_CP086372.1 Protein Homology CDS 956066 957031 . - 0 ID=cds-WP_109182067.1;Parent=gene-LNP58_RS04605;Dbxref=Genbank:WP_109182067.1;Name=WP_109182067.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS04605;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182067.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 957097 959038 . + . ID=gene-LNP58_RS04610;Name=LNP58_RS04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04610;old_locus_tag=LNP58_04605;partial=true;pseudo=true;start_range=.,957097 NZ_CP086372.1 Protein Homology CDS 957097 959038 . + 0 ID=cds-LNP58_RS04610;Parent=gene-LNP58_RS04610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038412.1;locus_tag=LNP58_RS04610;partial=true;product=sodium-translocating pyrophosphatase;pseudo=true;start_range=.,957097;transl_table=11 NZ_CP086372.1 RefSeq gene 959331 959813 . - . ID=gene-LNP58_RS04615;Name=LNP58_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04615;old_locus_tag=LNP58_04610 NZ_CP086372.1 Protein Homology CDS 959331 959813 . - 0 ID=cds-WP_011407697.1;Parent=gene-LNP58_RS04615;Dbxref=Genbank:WP_011407697.1;Name=WP_011407697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158947.1;locus_tag=LNP58_RS04615;product=hypothetical protein;protein_id=WP_011407697.1;transl_table=11 NZ_CP086372.1 RefSeq gene 960010 960546 . + . ID=gene-LNP58_RS04620;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LNP58_RS04620;old_locus_tag=LNP58_04615 NZ_CP086372.1 Protein Homology CDS 960010 960546 . + 0 ID=cds-WP_011257818.1;Parent=gene-LNP58_RS04620;Dbxref=Genbank:WP_011257818.1;Name=WP_011257818.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483319.1;locus_tag=LNP58_RS04620;product=inorganic diphosphatase;protein_id=WP_011257818.1;transl_table=11 NZ_CP086372.1 RefSeq gene 960660 961808 . + . ID=gene-LNP58_RS04625;Name=LNP58_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04625;old_locus_tag=LNP58_04620 NZ_CP086372.1 Protein Homology CDS 960660 961808 . + 0 ID=cds-WP_011257817.1;Parent=gene-LNP58_RS04625;Dbxref=Genbank:WP_011257817.1;Name=WP_011257817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504498.1;locus_tag=LNP58_RS04625;product=HDOD domain-containing protein;protein_id=WP_011257817.1;transl_table=11 NZ_CP086372.1 RefSeq gene 962249 962325 . + . ID=gene-LNP58_RS04630;Name=LNP58_RS04630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04630;old_locus_tag=LNP58_04625 NZ_CP086372.1 cmsearch ncRNA 962249 962325 . + . ID=rna-LNP58_RS04630;Parent=gene-LNP58_RS04630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04630;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 962249 962325 . + . ID=exon-LNP58_RS04630-1;Parent=rna-LNP58_RS04630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04630;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 962423 965389 . - . ID=gene-LNP58_RS04635;Name=LNP58_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04635;old_locus_tag=LNP58_04630 NZ_CP086372.1 Protein Homology CDS 962423 965389 . - 0 ID=cds-WP_011407696.1;Parent=gene-LNP58_RS04635;Dbxref=Genbank:WP_011407696.1;Name=WP_011407696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990845.1;locus_tag=LNP58_RS04635;product=TonB-dependent receptor;protein_id=WP_011407696.1;transl_table=11 NZ_CP086372.1 RefSeq gene 965438 966331 . - . ID=gene-LNP58_RS04640;Name=LNP58_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04640;old_locus_tag=LNP58_04635 NZ_CP086372.1 Protein Homology CDS 965438 966331 . - 0 ID=cds-WP_011407695.1;Parent=gene-LNP58_RS04640;Dbxref=Genbank:WP_011407695.1;Name=WP_011407695.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573718.1;locus_tag=LNP58_RS04640;product=helix-turn-helix domain-containing protein;protein_id=WP_011407695.1;transl_table=11 NZ_CP086372.1 RefSeq gene 966442 968793 . - . ID=gene-LNP58_RS04645;Name=LNP58_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04645;old_locus_tag=LNP58_04640 NZ_CP086372.1 Protein Homology CDS 966442 968793 . - 0 ID=cds-WP_011407694.1;Parent=gene-LNP58_RS04645;Dbxref=Genbank:WP_011407694.1;Name=WP_011407694.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364401.1;locus_tag=LNP58_RS04645;product=winged helix-turn-helix domain-containing protein;protein_id=WP_011407694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 969219 971096 . - . ID=gene-LNP58_RS04650;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LNP58_RS04650;old_locus_tag=LNP58_04645 NZ_CP086372.1 Protein Homology CDS 969219 971096 . - 0 ID=cds-WP_011407693.1;Parent=gene-LNP58_RS04650;Dbxref=Genbank:WP_011407693.1;Name=WP_011407693.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407693.1;locus_tag=LNP58_RS04650;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_011407693.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 971188 971285 . - . ID=id-NZ_CP086372.1:971188..971285;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq gene 971602 971678 . - . ID=gene-LNP58_RS04655;Name=LNP58_RS04655;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04655;old_locus_tag=LNP58_04650 NZ_CP086372.1 cmsearch ncRNA 971602 971678 . - . ID=rna-LNP58_RS04655;Parent=gene-LNP58_RS04655;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04655;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 971602 971678 . - . ID=exon-LNP58_RS04655-1;Parent=rna-LNP58_RS04655;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04655;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 972373 973374 . + . ID=gene-LNP58_RS04660;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LNP58_RS04660;old_locus_tag=LNP58_04655 NZ_CP086372.1 Protein Homology CDS 972373 973374 . + 0 ID=cds-WP_011257812.1;Parent=gene-LNP58_RS04660;Dbxref=Genbank:WP_011257812.1;Name=WP_011257812.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504503.1;locus_tag=LNP58_RS04660;product=ketol-acid reductoisomerase;protein_id=WP_011257812.1;transl_table=11 NZ_CP086372.1 RefSeq gene 973418 975139 . + . ID=gene-LNP58_RS04665;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LNP58_RS04665;old_locus_tag=LNP58_04660 NZ_CP086372.1 Protein Homology CDS 973418 975139 . + 0 ID=cds-WP_011257811.1;Parent=gene-LNP58_RS04665;Dbxref=Genbank:WP_011257811.1;Name=WP_011257811.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804901.1;locus_tag=LNP58_RS04665;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_011257811.1;transl_table=11 NZ_CP086372.1 RefSeq gene 975123 975380 . + . ID=gene-LNP58_RS04670;Name=LNP58_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04670;old_locus_tag=LNP58_04665 NZ_CP086372.1 Protein Homology CDS 975123 975380 . + 0 ID=cds-WP_011257810.1;Parent=gene-LNP58_RS04670;Dbxref=Genbank:WP_011257810.1;Name=WP_011257810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504505.1;locus_tag=LNP58_RS04670;product=acetolactate synthase;protein_id=WP_011257810.1;transl_table=11 NZ_CP086372.1 RefSeq gene 975510 976580 . + . ID=gene-LNP58_RS04675;Name=LNP58_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04675;old_locus_tag=LNP58_04670 NZ_CP086372.1 Protein Homology CDS 975510 976580 . + 0 ID=cds-WP_012446012.1;Parent=gene-LNP58_RS04675;Dbxref=Genbank:WP_012446012.1;Name=WP_012446012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912014.1;locus_tag=LNP58_RS04675;product=threonine dehydratase;protein_id=WP_012446012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 976577 978139 . + . ID=gene-LNP58_RS04680;Name=LNP58_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04680;old_locus_tag=LNP58_04675 NZ_CP086372.1 Protein Homology CDS 976577 978139 . + 0 ID=cds-WP_011407690.1;Parent=gene-LNP58_RS04680;Dbxref=Genbank:WP_011407690.1;Name=WP_011407690.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156818.1;locus_tag=LNP58_RS04680;product=2-isopropylmalate synthase;protein_id=WP_011407690.1;transl_table=11 NZ_CP086372.1 RefSeq gene 978470 979543 . - . ID=gene-LNP58_RS04685;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LNP58_RS04685;old_locus_tag=LNP58_04680 NZ_CP086372.1 Protein Homology CDS 978470 979543 . - 0 ID=cds-WP_011257808.1;Parent=gene-LNP58_RS04685;Dbxref=Genbank:WP_011257808.1;Name=WP_011257808.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912018.1;locus_tag=LNP58_RS04685;product=3-isopropylmalate dehydrogenase;protein_id=WP_011257808.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 979580 980363 . - . ID=gene-LNP58_RS04690;Name=LNP58_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04690;old_locus_tag=LNP58_04685;pseudo=true NZ_CP086372.1 Protein Homology CDS 979580 980363 . - 0 ID=cds-LNP58_RS04690;Parent=gene-LNP58_RS04690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446015.1;locus_tag=LNP58_RS04690;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 980360 981007 . - . ID=gene-LNP58_RS04695;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LNP58_RS04695;old_locus_tag=LNP58_04690 NZ_CP086372.1 Protein Homology CDS 980360 981007 . - 0 ID=cds-WP_011257807.1;Parent=gene-LNP58_RS04695;Dbxref=Genbank:WP_011257807.1;Name=WP_011257807.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301096.1;locus_tag=LNP58_RS04695;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_011257807.1;transl_table=11 NZ_CP086372.1 RefSeq gene 981075 982523 . - . ID=gene-LNP58_RS04700;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LNP58_RS04700;old_locus_tag=LNP58_04695 NZ_CP086372.1 Protein Homology CDS 981075 982523 . - 0 ID=cds-WP_011257806.1;Parent=gene-LNP58_RS04700;Dbxref=Genbank:WP_011257806.1;Name=WP_011257806.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091005.1;locus_tag=LNP58_RS04700;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_011257806.1;transl_table=11 NZ_CP086372.1 RefSeq gene 982644 983528 . + . ID=gene-LNP58_RS04705;Name=LNP58_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04705;old_locus_tag=LNP58_04700 NZ_CP086372.1 Protein Homology CDS 982644 983528 . + 0 ID=cds-WP_069963917.1;Parent=gene-LNP58_RS04705;Dbxref=Genbank:WP_069963917.1;Name=WP_069963917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849465.1;locus_tag=LNP58_RS04705;product=LysR family transcriptional regulator;protein_id=WP_069963917.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 983773 985100 . - . ID=gene-LNP58_RS04710;Name=LNP58_RS04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04710;old_locus_tag=LNP58_04705;pseudo=true NZ_CP086372.1 Protein Homology CDS 983773 985100 . - 0 ID=cds-LNP58_RS04710;Parent=gene-LNP58_RS04710;Note=frameshifted%3B internal stop;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967738.1;locus_tag=LNP58_RS04710;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 985320 985973 . + . ID=gene-LNP58_RS04715;Name=LNP58_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04715;old_locus_tag=LNP58_04710 NZ_CP086372.1 Protein Homology CDS 985320 985973 . + 0 ID=cds-WP_011257800.1;Parent=gene-LNP58_RS04715;Dbxref=Genbank:WP_011257800.1;Name=WP_011257800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167389.1;locus_tag=LNP58_RS04715;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011257800.1;transl_table=11 NZ_CP086372.1 RefSeq gene 986102 986758 . + . ID=gene-LNP58_RS04720;Name=LNP58_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04720;old_locus_tag=LNP58_04715 NZ_CP086372.1 Protein Homology CDS 986102 986758 . + 0 ID=cds-WP_011407686.1;Parent=gene-LNP58_RS04720;Dbxref=Genbank:WP_011407686.1;Name=WP_011407686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804883.1;locus_tag=LNP58_RS04720;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_011407686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 986779 988158 . + . ID=gene-LNP58_RS04725;Name=LNP58_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04725;old_locus_tag=LNP58_04720 NZ_CP086372.1 Protein Homology CDS 986779 988158 . + 0 ID=cds-WP_011257798.1;Parent=gene-LNP58_RS04725;Dbxref=Genbank:WP_011257798.1;Name=WP_011257798.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364366.1;locus_tag=LNP58_RS04725;product=TolC family outer membrane protein;protein_id=WP_011257798.1;transl_table=11 NZ_CP086372.1 RefSeq gene 988431 989747 . - . ID=gene-LNP58_RS04730;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LNP58_RS04730;old_locus_tag=LNP58_04725 NZ_CP086372.1 Protein Homology CDS 988431 989747 . - 0 ID=cds-WP_011257797.1;Parent=gene-LNP58_RS04730;Dbxref=Genbank:WP_011257797.1;Name=WP_011257797.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573684.1;locus_tag=LNP58_RS04730;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_011257797.1;transl_table=11 NZ_CP086372.1 RefSeq gene 989824 990744 . + . ID=gene-LNP58_RS04735;Name=LNP58_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04735;old_locus_tag=LNP58_04730 NZ_CP086372.1 Protein Homology CDS 989824 990744 . + 0 ID=cds-WP_011257796.1;Parent=gene-LNP58_RS04735;Dbxref=Genbank:WP_011257796.1;Name=WP_011257796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967748.1;locus_tag=LNP58_RS04735;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_011257796.1;transl_table=11 NZ_CP086372.1 RefSeq gene 990978 992312 . - . ID=gene-LNP58_RS04740;Name=LNP58_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04740;old_locus_tag=LNP58_04735 NZ_CP086372.1 Protein Homology CDS 990978 992312 . - 0 ID=cds-WP_011257795.1;Parent=gene-LNP58_RS04740;Dbxref=Genbank:WP_011257795.1;Name=WP_011257795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257795.1;locus_tag=LNP58_RS04740;product=O-antigen ligase;protein_id=WP_011257795.1;transl_table=11 NZ_CP086372.1 RefSeq gene 992293 993405 . - . ID=gene-LNP58_RS04745;Name=LNP58_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04745;old_locus_tag=LNP58_04740 NZ_CP086372.1 Protein Homology CDS 992293 993405 . - 0 ID=cds-WP_011407685.1;Parent=gene-LNP58_RS04745;Dbxref=Genbank:WP_011407685.1;Name=WP_011407685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483375.1;locus_tag=LNP58_RS04745;product=glycosyltransferase;protein_id=WP_011407685.1;transl_table=11 NZ_CP086372.1 RefSeq gene 993415 993612 . - . ID=gene-LNP58_RS04750;Name=LNP58_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04750;old_locus_tag=LNP58_04745 NZ_CP086372.1 Protein Homology CDS 993415 993612 . - 0 ID=cds-WP_011257793.1;Parent=gene-LNP58_RS04750;Dbxref=Genbank:WP_011257793.1;Name=WP_011257793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483377.1;locus_tag=LNP58_RS04750;product=zinc-finger domain-containing protein;protein_id=WP_011257793.1;transl_table=11 NZ_CP086372.1 RefSeq gene 993746 994714 . + . ID=gene-LNP58_RS04755;Name=LNP58_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04755;old_locus_tag=LNP58_04750 NZ_CP086372.1 Protein Homology CDS 993746 994714 . + 0 ID=cds-WP_011258529.1;Parent=gene-LNP58_RS04755;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS04755;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP086372.1 RefSeq gene 994898 995338 . - . ID=gene-LNP58_RS04760;Name=LNP58_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04760;old_locus_tag=LNP58_04755 NZ_CP086372.1 Protein Homology CDS 994898 995338 . - 0 ID=cds-WP_228329688.1;Parent=gene-LNP58_RS04760;Dbxref=Genbank:WP_228329688.1;Name=WP_228329688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365472.1;locus_tag=LNP58_RS04760;product=PH domain-containing protein;protein_id=WP_228329688.1;transl_table=11 NZ_CP086372.1 RefSeq gene 995621 996058 . - . ID=gene-LNP58_RS04765;Name=LNP58_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04765;old_locus_tag=LNP58_04760 NZ_CP086372.1 GeneMarkS-2+ CDS 995621 996058 . - 0 ID=cds-WP_011257792.1;Parent=gene-LNP58_RS04765;Dbxref=Genbank:WP_011257792.1;Name=WP_011257792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04765;product=hypothetical protein;protein_id=WP_011257792.1;transl_table=11 NZ_CP086372.1 RefSeq gene 996058 996693 . - . ID=gene-LNP58_RS04770;Name=LNP58_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04770;old_locus_tag=LNP58_04765 NZ_CP086372.1 Protein Homology CDS 996058 996693 . - 0 ID=cds-WP_011257791.1;Parent=gene-LNP58_RS04770;Dbxref=Genbank:WP_011257791.1;Name=WP_011257791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303840.1;locus_tag=LNP58_RS04770;product=helix-turn-helix domain-containing protein;protein_id=WP_011257791.1;transl_table=11 NZ_CP086372.1 RefSeq gene 996937 998313 . + . ID=gene-LNP58_RS04775;Name=LNP58_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04775;old_locus_tag=LNP58_04770 NZ_CP086372.1 Protein Homology CDS 996937 998313 . + 0 ID=cds-WP_011407683.1;Parent=gene-LNP58_RS04775;Dbxref=Genbank:WP_011407683.1;Name=WP_011407683.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS04775;product=IS5 family transposase;protein_id=WP_011407683.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 998424 998912 . + . ID=gene-LNP58_RS04780;Name=LNP58_RS04780;end_range=998912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04780;old_locus_tag=LNP58_04775;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 998424 998912 . + 0 ID=cds-LNP58_RS04780;Parent=gene-LNP58_RS04780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=998912,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=LNP58_RS04780;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 998928 999206 . + . ID=gene-LNP58_RS04785;Name=LNP58_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04785;old_locus_tag=LNP58_04780 NZ_CP086372.1 Protein Homology CDS 998928 999206 . + 0 ID=cds-WP_033013340.1;Parent=gene-LNP58_RS04785;Dbxref=Genbank:WP_033013340.1;Name=WP_033013340.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: protein motif:HMM:NF020421.2;locus_tag=LNP58_RS04785;product=SymE family type I addiction module toxin;protein_id=WP_033013340.1;transl_table=11 NZ_CP086372.1 RefSeq gene 999400 1002072 . - . ID=gene-LNP58_RS04790;Name=LNP58_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04790;old_locus_tag=LNP58_04785 NZ_CP086372.1 Protein Homology CDS 999400 1002072 . - 0 ID=cds-WP_011407682.1;Parent=gene-LNP58_RS04790;Dbxref=Genbank:WP_011407682.1;Name=WP_011407682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368450.1;locus_tag=LNP58_RS04790;product=M1 family metallopeptidase;protein_id=WP_011407682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1002398 1003690 . - . ID=gene-LNP58_RS04795;Name=LNP58_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04795;old_locus_tag=LNP58_04790 NZ_CP086372.1 Protein Homology CDS 1002398 1003690 . - 0 ID=cds-WP_011407681.1;Parent=gene-LNP58_RS04795;Dbxref=Genbank:WP_011407681.1;Name=WP_011407681.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=LNP58_RS04795;product=adenylosuccinate synthase;protein_id=WP_011407681.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1004028 1004213 . - . ID=gene-LNP58_RS04800;Name=LNP58_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04800;old_locus_tag=LNP58_04795 NZ_CP086372.1 Protein Homology CDS 1004028 1004213 . - 0 ID=cds-WP_011257785.1;Parent=gene-LNP58_RS04800;Dbxref=Genbank:WP_011257785.1;Name=WP_011257785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257785.1;locus_tag=LNP58_RS04800;product=DUF2065 family protein;protein_id=WP_011257785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1004507 1005370 . - . ID=gene-LNP58_RS04805;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LNP58_RS04805;old_locus_tag=LNP58_04800 NZ_CP086372.1 Protein Homology CDS 1004507 1005370 . - 0 ID=cds-WP_011257784.1;Parent=gene-LNP58_RS04805;Dbxref=Genbank:WP_011257784.1;Name=WP_011257784.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449475.1;locus_tag=LNP58_RS04805;product=protease modulator HflC;protein_id=WP_011257784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1005370 1006497 . - . ID=gene-LNP58_RS04810;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LNP58_RS04810;old_locus_tag=LNP58_04805 NZ_CP086372.1 Protein Homology CDS 1005370 1006497 . - 0 ID=cds-WP_011407680.1;Parent=gene-LNP58_RS04810;Dbxref=Genbank:WP_011407680.1;Name=WP_011407680.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920523.1;locus_tag=LNP58_RS04810;product=FtsH protease activity modulator HflK;protein_id=WP_011407680.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1007127 1007513 . - . ID=gene-LNP58_RS04815;Name=pilH;gbkey=Gene;gene=pilH;gene_biotype=protein_coding;locus_tag=LNP58_RS04815;old_locus_tag=LNP58_04810 NZ_CP086372.1 Protein Homology CDS 1007127 1007513 . - 0 ID=cds-WP_011257782.1;Parent=gene-LNP58_RS04815;Dbxref=Genbank:WP_011257782.1;Name=WP_011257782.1;gbkey=CDS;gene=pilH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036249.1;locus_tag=LNP58_RS04815;product=twitching motility response regulator PilH;protein_id=WP_011257782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1007753 1008652 . - . ID=gene-LNP58_RS04820;Name=LNP58_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04820;old_locus_tag=LNP58_04815 NZ_CP086372.1 Protein Homology CDS 1007753 1008652 . - 0 ID=cds-WP_011257781.1;Parent=gene-LNP58_RS04820;Dbxref=Genbank:WP_011257781.1;Name=WP_011257781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257781.1;locus_tag=LNP58_RS04820;product=DnaJ domain-containing protein;protein_id=WP_011257781.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1009063 1009539 . - . ID=gene-LNP58_RS04825;Name=LNP58_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04825;old_locus_tag=LNP58_04820 NZ_CP086372.1 Protein Homology CDS 1009063 1009539 . - 0 ID=cds-WP_011407679.1;Parent=gene-LNP58_RS04825;Dbxref=Genbank:WP_011407679.1;Name=WP_011407679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155766.1;locus_tag=LNP58_RS04825;product=Hsp20/alpha crystallin family protein;protein_id=WP_011407679.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1009702 1010184 . + . ID=gene-LNP58_RS04830;Name=LNP58_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04830;old_locus_tag=LNP58_04825 NZ_CP086372.1 Protein Homology CDS 1009702 1010184 . + 0 ID=cds-WP_011257779.1;Parent=gene-LNP58_RS04830;Dbxref=Genbank:WP_011257779.1;Name=WP_011257779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155767.1;locus_tag=LNP58_RS04830;product=peroxiredoxin;protein_id=WP_011257779.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1010227 1010787 . + . ID=gene-LNP58_RS04835;Name=LNP58_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04835;old_locus_tag=LNP58_04830 NZ_CP086372.1 Protein Homology CDS 1010227 1010787 . + 0 ID=cds-WP_011257778.1;Parent=gene-LNP58_RS04835;Dbxref=Genbank:WP_011257778.1;Name=WP_011257778.1;Ontology_term=GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996162.1;locus_tag=LNP58_RS04835;product=ferritin-like domain-containing protein;protein_id=WP_011257778.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1010921 1011883 . - . ID=gene-LNP58_RS04840;Name=LNP58_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04840;old_locus_tag=LNP58_04835 NZ_CP086372.1 Protein Homology CDS 1010921 1011883 . - 0 ID=cds-WP_075243999.1;Parent=gene-LNP58_RS04840;Dbxref=Genbank:WP_075243999.1;Name=WP_075243999.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407678.1;locus_tag=LNP58_RS04840;product=IS30 family transposase;protein_id=WP_075243999.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1012002 1012078 . - . ID=gene-LNP58_RS04845;Name=LNP58_RS04845;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS04845;old_locus_tag=LNP58_04840 NZ_CP086372.1 cmsearch ncRNA 1012002 1012078 . - . ID=rna-LNP58_RS04845;Parent=gene-LNP58_RS04845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04845;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1012002 1012078 . - . ID=exon-LNP58_RS04845-1;Parent=rna-LNP58_RS04845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS04845;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1012228 1013547 . - . ID=gene-LNP58_RS04850;Name=LNP58_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04850;old_locus_tag=LNP58_04845 NZ_CP086372.1 Protein Homology CDS 1012228 1013547 . - 0 ID=cds-WP_228329687.1;Parent=gene-LNP58_RS04850;Dbxref=Genbank:WP_228329687.1;Name=WP_228329687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS04850;product=IS701-like element ISXo15 family transposase;protein_id=WP_228329687.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1013618 1014295 . - . ID=gene-LNP58_RS04855;Name=LNP58_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04855;old_locus_tag=LNP58_04850 NZ_CP086372.1 Protein Homology CDS 1013618 1014295 . - 0 ID=cds-WP_228329686.1;Parent=gene-LNP58_RS04855;Dbxref=Genbank:WP_228329686.1;Name=WP_228329686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257774.1;locus_tag=LNP58_RS04855;product=hypothetical protein;protein_id=WP_228329686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1014654 1015601 . - . ID=gene-LNP58_RS04860;Name=LNP58_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04860;old_locus_tag=LNP58_04855 NZ_CP086372.1 Protein Homology CDS 1014654 1015601 . - 0 ID=cds-WP_041182786.1;Parent=gene-LNP58_RS04860;Dbxref=Genbank:WP_041182786.1;Name=WP_041182786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944837.1;locus_tag=LNP58_RS04860;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_041182786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1015776 1018763 . - . ID=gene-LNP58_RS04865;Name=LNP58_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04865;old_locus_tag=LNP58_04860 NZ_CP086372.1 Protein Homology CDS 1015776 1018763 . - 0 ID=cds-WP_069964984.1;Parent=gene-LNP58_RS04865;Dbxref=Genbank:WP_069964984.1;Name=WP_069964984.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483916.1;locus_tag=LNP58_RS04865;product=TonB-dependent receptor;protein_id=WP_069964984.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1019092 1020060 . - . ID=gene-LNP58_RS04870;Name=LNP58_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04870;old_locus_tag=LNP58_04865 NZ_CP086372.1 Protein Homology CDS 1019092 1020060 . - 0 ID=cds-WP_011258802.1-6;Parent=gene-LNP58_RS04870;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS04870;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1020134 1020600 . - . ID=gene-LNP58_RS04875;Name=LNP58_RS04875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04875;old_locus_tag=LNP58_04870;pseudo=true NZ_CP086372.1 Protein Homology CDS 1020134 1020600 . - 0 ID=cds-LNP58_RS04875;Parent=gene-LNP58_RS04875;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913955.1;locus_tag=LNP58_RS04875;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1020903 1021085 . + . ID=gene-LNP58_RS04880;Name=LNP58_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04880;old_locus_tag=LNP58_04875 NZ_CP086372.1 Protein Homology CDS 1020903 1021085 . + 0 ID=cds-WP_103057250.1;Parent=gene-LNP58_RS04880;Dbxref=Genbank:WP_103057250.1;Name=WP_103057250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913246.1;locus_tag=LNP58_RS04880;product=hypothetical protein;protein_id=WP_103057250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1021195 1022193 . - . ID=gene-LNP58_RS04885;Name=LNP58_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04885;old_locus_tag=LNP58_04880 NZ_CP086372.1 Protein Homology CDS 1021195 1022193 . - 0 ID=cds-WP_011407673.1;Parent=gene-LNP58_RS04885;Dbxref=Genbank:WP_011407673.1;Name=WP_011407673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089556.1;locus_tag=LNP58_RS04885;product=nucleoside hydrolase;protein_id=WP_011407673.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1022272 1024488 . - . ID=gene-LNP58_RS04890;Name=LNP58_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04890;old_locus_tag=LNP58_04885 NZ_CP086372.1 Protein Homology CDS 1022272 1024488 . - 0 ID=cds-WP_011407672.1;Parent=gene-LNP58_RS04890;Dbxref=Genbank:WP_011407672.1;Name=WP_011407672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305008.1;locus_tag=LNP58_RS04890;product=TonB-dependent receptor;protein_id=WP_011407672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1024730 1025698 . + . ID=gene-LNP58_RS04895;Name=LNP58_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04895;old_locus_tag=LNP58_04890 NZ_CP086372.1 Protein Homology CDS 1024730 1025698 . + 0 ID=cds-WP_011409545.1;Parent=gene-LNP58_RS04895;Dbxref=Genbank:WP_011409545.1;Name=WP_011409545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS04895;product=IS5-like element ISXo1 family transposase;protein_id=WP_011409545.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1026148 1027347 . - . ID=gene-LNP58_RS04900;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LNP58_RS04900;old_locus_tag=LNP58_04895 NZ_CP086372.1 Protein Homology CDS 1026148 1027347 . - 0 ID=cds-WP_069960159.1;Parent=gene-LNP58_RS04900;Dbxref=Genbank:WP_069960159.1;Name=WP_069960159.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502272.1;locus_tag=LNP58_RS04900;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_069960159.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1027829 1027996 . - . ID=gene-LNP58_RS04905;Name=LNP58_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04905;old_locus_tag=LNP58_04900 NZ_CP086372.1 Protein Homology CDS 1027829 1027996 . - 0 ID=cds-WP_012446043.1;Parent=gene-LNP58_RS04905;Dbxref=Genbank:WP_012446043.1;Name=WP_012446043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502269.1;locus_tag=LNP58_RS04905;product=hypothetical protein;protein_id=WP_012446043.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1028080 1030671 . - . ID=gene-LNP58_RS04910;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LNP58_RS04910;old_locus_tag=LNP58_04905 NZ_CP086372.1 Protein Homology CDS 1028080 1030671 . - 0 ID=cds-WP_069963828.1;Parent=gene-LNP58_RS04910;Dbxref=Genbank:WP_069963828.1;Name=WP_069963828.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849833.1;locus_tag=LNP58_RS04910;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_069963828.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1030866 1032020 . - . ID=gene-LNP58_RS04915;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=LNP58_RS04915;old_locus_tag=LNP58_04910 NZ_CP086372.1 Protein Homology CDS 1030866 1032020 . - 0 ID=cds-WP_011407667.1;Parent=gene-LNP58_RS04915;Dbxref=Genbank:WP_011407667.1;Name=WP_011407667.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502267.1;locus_tag=LNP58_RS04915;product=2-methylcitrate synthase;protein_id=WP_011407667.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1032096 1032992 . - . ID=gene-LNP58_RS04920;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LNP58_RS04920;old_locus_tag=LNP58_04915 NZ_CP086372.1 Protein Homology CDS 1032096 1032992 . - 0 ID=cds-WP_011257763.1;Parent=gene-LNP58_RS04920;Dbxref=Genbank:WP_011257763.1;Name=WP_011257763.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257763.1;locus_tag=LNP58_RS04920;product=methylisocitrate lyase;protein_id=WP_011257763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1033138 1034736 . + . ID=gene-LNP58_RS04925;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=LNP58_RS04925;old_locus_tag=LNP58_04920 NZ_CP086372.1 Protein Homology CDS 1033138 1034736 . + 0 ID=cds-WP_041181972.1;Parent=gene-LNP58_RS04925;Dbxref=Genbank:WP_041181972.1;Name=WP_041181972.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502265.1;locus_tag=LNP58_RS04925;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_041181972.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1034972 1035298 . - . ID=gene-LNP58_RS04930;Name=LNP58_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04930;old_locus_tag=LNP58_04925 NZ_CP086372.1 Protein Homology CDS 1034972 1035298 . - 0 ID=cds-WP_011407665.1;Parent=gene-LNP58_RS04930;Dbxref=Genbank:WP_011407665.1;Name=WP_011407665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089549.1;locus_tag=LNP58_RS04930;product=hypothetical protein;protein_id=WP_011407665.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1035381 1035602 . - . ID=gene-LNP58_RS04935;Name=LNP58_RS04935;end_range=1035602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS04935;old_locus_tag=LNP58_04930;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1035381 1035602 . - 0 ID=cds-LNP58_RS04935;Parent=gene-LNP58_RS04935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1035602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160235.1;locus_tag=LNP58_RS04935;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1035660 1036454 . - . ID=gene-LNP58_RS04940;Name=LNP58_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04940;old_locus_tag=LNP58_04935 NZ_CP086372.1 GeneMarkS-2+ CDS 1035660 1036454 . - 0 ID=cds-WP_112998597.1;Parent=gene-LNP58_RS04940;Dbxref=Genbank:WP_112998597.1;Name=WP_112998597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS04940;product=hypothetical protein;protein_id=WP_112998597.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1036794 1036868 . - . ID=gene-LNP58_RS04945;Name=LNP58_RS04945;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS04945;old_locus_tag=LNP58_04940 NZ_CP086372.1 tRNAscan-SE tRNA 1036794 1036868 . - . ID=rna-LNP58_RS04945;Parent=gene-LNP58_RS04945;anticodon=(pos:complement(1036834..1036836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04945;product=tRNA-Val NZ_CP086372.1 tRNAscan-SE exon 1036794 1036868 . - . ID=exon-LNP58_RS04945-1;Parent=rna-LNP58_RS04945;anticodon=(pos:complement(1036834..1036836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS04945;product=tRNA-Val NZ_CP086372.1 RefSeq gene 1037145 1037498 . - . ID=gene-LNP58_RS04950;Name=LNP58_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04950;old_locus_tag=LNP58_04945 NZ_CP086372.1 Protein Homology CDS 1037145 1037498 . - 0 ID=cds-WP_011257760.1;Parent=gene-LNP58_RS04950;Dbxref=Genbank:WP_011257760.1;Name=WP_011257760.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155784.1;locus_tag=LNP58_RS04950;product=PilZ domain-containing protein;protein_id=WP_011257760.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1037495 1038454 . - . ID=gene-LNP58_RS04955;Name=LNP58_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04955;old_locus_tag=LNP58_04950 NZ_CP086372.1 Protein Homology CDS 1037495 1038454 . - 0 ID=cds-WP_069959732.1;Parent=gene-LNP58_RS04955;Dbxref=Genbank:WP_069959732.1;Name=WP_069959732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969013.1;locus_tag=LNP58_RS04955;product=DNA polymerase III subunit delta';protein_id=WP_069959732.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1038451 1039524 . - . ID=gene-LNP58_RS04960;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LNP58_RS04960;old_locus_tag=LNP58_04955 NZ_CP086372.1 Protein Homology CDS 1038451 1039524 . - 0 ID=cds-WP_011257758.1;Parent=gene-LNP58_RS04960;Dbxref=Genbank:WP_011257758.1;Name=WP_011257758.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160234.1;locus_tag=LNP58_RS04960;product=endolytic transglycosylase MltG;protein_id=WP_011257758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1039585 1040940 . - . ID=gene-LNP58_RS04965;Name=LNP58_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04965;old_locus_tag=LNP58_04960 NZ_CP086372.1 Protein Homology CDS 1039585 1040940 . - 0 ID=cds-WP_011407662.1;Parent=gene-LNP58_RS04965;Dbxref=Genbank:WP_011407662.1;Name=WP_011407662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160233.1;locus_tag=LNP58_RS04965;product=aminodeoxychorismate synthase component I;protein_id=WP_011407662.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1041111 1042346 . - . ID=gene-LNP58_RS04970;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LNP58_RS04970;old_locus_tag=LNP58_04965 NZ_CP086372.1 Protein Homology CDS 1041111 1042346 . - 0 ID=cds-WP_011407661.1;Parent=gene-LNP58_RS04970;Dbxref=Genbank:WP_011407661.1;Name=WP_011407661.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302031.1;locus_tag=LNP58_RS04970;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011407661.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1042488 1042727 . - . ID=gene-LNP58_RS04975;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LNP58_RS04975;old_locus_tag=LNP58_04970 NZ_CP086372.1 Protein Homology CDS 1042488 1042727 . - 0 ID=cds-WP_010368407.1;Parent=gene-LNP58_RS04975;Dbxref=Genbank:WP_010368407.1;Name=WP_010368407.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535667.1;locus_tag=LNP58_RS04975;product=acyl carrier protein;protein_id=WP_010368407.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1042932 1043675 . - . ID=gene-LNP58_RS04980;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LNP58_RS04980;old_locus_tag=LNP58_04975 NZ_CP086372.1 Protein Homology CDS 1042932 1043675 . - 0 ID=cds-WP_011407660.1;Parent=gene-LNP58_RS04980;Dbxref=Genbank:WP_011407660.1;Name=WP_011407660.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814323.1;locus_tag=LNP58_RS04980;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_011407660.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1043758 1044702 . - . ID=gene-LNP58_RS04985;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LNP58_RS04985;old_locus_tag=LNP58_04980 NZ_CP086372.1 Protein Homology CDS 1043758 1044702 . - 0 ID=cds-WP_011257754.1;Parent=gene-LNP58_RS04985;Dbxref=Genbank:WP_011257754.1;Name=WP_011257754.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304127.1;locus_tag=LNP58_RS04985;product=ACP S-malonyltransferase;protein_id=WP_011257754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1044980 1045420 . - . ID=gene-LNP58_RS04990;Name=LNP58_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04990;old_locus_tag=LNP58_04985 NZ_CP086372.1 Protein Homology CDS 1044980 1045420 . - 0 ID=cds-WP_011257753.1;Parent=gene-LNP58_RS04990;Dbxref=Genbank:WP_011257753.1;Name=WP_011257753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969006.1;locus_tag=LNP58_RS04990;product=MEKHLA domain-containing protein;protein_id=WP_011257753.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1045650 1046627 . - . ID=gene-LNP58_RS04995;Name=LNP58_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS04995;old_locus_tag=LNP58_04990 NZ_CP086372.1 Protein Homology CDS 1045650 1046627 . - 0 ID=cds-WP_011257752.1;Parent=gene-LNP58_RS04995;Dbxref=Genbank:WP_011257752.1;Name=WP_011257752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502254.1;locus_tag=LNP58_RS04995;product=ketoacyl-ACP synthase III;protein_id=WP_011257752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1046717 1046911 . - . ID=gene-LNP58_RS05000;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LNP58_RS05000;old_locus_tag=LNP58_04995 NZ_CP086372.1 Protein Homology CDS 1046717 1046911 . - 0 ID=cds-WP_010368401.1;Parent=gene-LNP58_RS05000;Dbxref=Genbank:WP_010368401.1;Name=WP_010368401.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302036.1;locus_tag=LNP58_RS05000;product=50S ribosomal protein L32;protein_id=WP_010368401.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1047010 1047519 . - . ID=gene-LNP58_RS05005;Name=LNP58_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05005;old_locus_tag=LNP58_05000 NZ_CP086372.1 Protein Homology CDS 1047010 1047519 . - 0 ID=cds-WP_011407659.1;Parent=gene-LNP58_RS05005;Dbxref=Genbank:WP_011407659.1;Name=WP_011407659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814328.1;locus_tag=LNP58_RS05005;product=YceD family protein;protein_id=WP_011407659.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1047632 1048207 . + . ID=gene-LNP58_RS05010;Name=LNP58_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05010;old_locus_tag=LNP58_05005 NZ_CP086372.1 Protein Homology CDS 1047632 1048207 . + 0 ID=cds-WP_011257750.1;Parent=gene-LNP58_RS05010;Dbxref=Genbank:WP_011257750.1;Name=WP_011257750.1;Ontology_term=GO:0000917,GO:0030428;gbkey=CDS;go_component=cell septum|0030428||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159643.1;locus_tag=LNP58_RS05010;product=Maf family nucleotide pyrophosphatase;protein_id=WP_011257750.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1048598 1049563 . - . ID=gene-LNP58_RS05015;Name=LNP58_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05015;old_locus_tag=LNP58_05010 NZ_CP086372.1 Protein Homology CDS 1048598 1049563 . - 0 ID=cds-WP_153303305.1;Parent=gene-LNP58_RS05015;Dbxref=Genbank:WP_153303305.1;Name=WP_153303305.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS05015;product=IS1595-like element ISXo5 family transposase;protein_id=WP_153303305.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1049675 1051966 . + . ID=gene-LNP58_RS05020;Name=LNP58_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05020;old_locus_tag=LNP58_05015 NZ_CP086372.1 Protein Homology CDS 1049675 1051966 . + 0 ID=cds-WP_069960153.1;Parent=gene-LNP58_RS05020;Dbxref=Genbank:WP_069960153.1;Name=WP_069960153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257747.1;locus_tag=LNP58_RS05020;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_069960153.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1052094 1052768 . + . ID=gene-LNP58_RS05025;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=LNP58_RS05025;old_locus_tag=LNP58_05020 NZ_CP086372.1 Protein Homology CDS 1052094 1052768 . + 0 ID=cds-WP_011257746.1;Parent=gene-LNP58_RS05025;Dbxref=Genbank:WP_011257746.1;Name=WP_011257746.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465423.1;locus_tag=LNP58_RS05025;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_011257746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1052765 1054609 . + . ID=gene-LNP58_RS05030;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=LNP58_RS05030;old_locus_tag=LNP58_05025 NZ_CP086372.1 Protein Homology CDS 1052765 1054609 . + 0 ID=cds-WP_011257745.1;Parent=gene-LNP58_RS05030;Dbxref=Genbank:WP_011257745.1;Name=WP_011257745.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119023.1;locus_tag=LNP58_RS05030;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_011257745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1054606 1055472 . + . ID=gene-LNP58_RS05035;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=LNP58_RS05035;old_locus_tag=LNP58_05030 NZ_CP086372.1 Protein Homology CDS 1054606 1055472 . + 0 ID=cds-WP_011257744.1;Parent=gene-LNP58_RS05035;Dbxref=Genbank:WP_011257744.1;Name=WP_011257744.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372412.1;locus_tag=LNP58_RS05035;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_011257744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1055492 1056124 . + . ID=gene-LNP58_RS05040;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=LNP58_RS05040;old_locus_tag=LNP58_05035 NZ_CP086372.1 Protein Homology CDS 1055492 1056124 . + 0 ID=cds-WP_011257743.1;Parent=gene-LNP58_RS05040;Dbxref=Genbank:WP_011257743.1;Name=WP_011257743.1;Ontology_term=GO:0043571,GO:0004518;gbkey=CDS;gene=cas4;go_function=nuclease activity|0004518||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927098.1;locus_tag=LNP58_RS05040;product=CRISPR-associated protein Cas4;protein_id=WP_011257743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1056127 1057161 . + . ID=gene-LNP58_RS05045;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=LNP58_RS05045;old_locus_tag=LNP58_05040 NZ_CP086372.1 Protein Homology CDS 1056127 1057161 . + 0 ID=cds-WP_011407655.1;Parent=gene-LNP58_RS05045;Dbxref=Genbank:WP_011407655.1;Name=WP_011407655.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927095.1;locus_tag=LNP58_RS05045;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_011407655.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1057176 1057466 . + . ID=gene-LNP58_RS05050;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=LNP58_RS05050;old_locus_tag=LNP58_05045 NZ_CP086372.1 Protein Homology CDS 1057176 1057466 . + 0 ID=cds-WP_011257741.1;Parent=gene-LNP58_RS05050;Dbxref=Genbank:WP_011257741.1;Name=WP_011257741.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927092.1;locus_tag=LNP58_RS05050;product=CRISPR-associated endonuclease Cas2;protein_id=WP_011257741.1;transl_table=11 NZ_CP086372.1 RefSeq direct_repeat 1057654 1062859 . + . ID=id-NZ_CP086372.1:1057654..1062859;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1057654..1057684;rpt_unit_seq=gtcgcgtcctcacgggcgcgtggattgaaac NZ_CP086372.1 RefSeq pseudogene 1062878 1063159 . - . ID=gene-LNP58_RS05055;Name=LNP58_RS05055;end_range=1063159,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05055;old_locus_tag=LNP58_05050;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1062878 1063159 . - 0 ID=cds-LNP58_RS05055;Parent=gene-LNP58_RS05055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1063159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=LNP58_RS05055;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1063197 1063304 . + . ID=gene-LNP58_RS05060;Name=LNP58_RS05060;end_range=1063304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05060;old_locus_tag=LNP58_05055;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1063197 1063304 . + 0 ID=cds-LNP58_RS05060;Parent=gene-LNP58_RS05060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1063304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445011.1;locus_tag=LNP58_RS05060;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1063409 1064191 . - . ID=gene-LNP58_RS05065;Name=LNP58_RS05065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05065;old_locus_tag=LNP58_05060;partial=true;pseudo=true;start_range=.,1063409 NZ_CP086372.1 Protein Homology CDS 1063409 1064191 . - 0 ID=cds-LNP58_RS05065;Parent=gene-LNP58_RS05065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS05065;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1063409;transl_table=11 NZ_CP086372.1 RefSeq gene 1064233 1065072 . - . ID=gene-LNP58_RS05070;Name=LNP58_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05070;old_locus_tag=LNP58_05065 NZ_CP086372.1 Protein Homology CDS 1064233 1065072 . - 0 ID=cds-WP_011407652.1;Parent=gene-LNP58_RS05070;Dbxref=Genbank:WP_011407652.1;Name=WP_011407652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174042.1;locus_tag=LNP58_RS05070;product=glycosyltransferase family 2 protein;protein_id=WP_011407652.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1065683 1066840 . + . ID=gene-LNP58_RS05075;Name=LNP58_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05075;old_locus_tag=LNP58_05070 NZ_CP086372.1 Protein Homology CDS 1065683 1066840 . + 0 ID=cds-WP_011407650.1;Parent=gene-LNP58_RS05075;Dbxref=Genbank:WP_011407650.1;Name=WP_011407650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300523.1;locus_tag=LNP58_RS05075;product=phosphotransferase;protein_id=WP_011407650.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1066876 1069038 . + . ID=gene-LNP58_RS05080;Name=LNP58_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05080;old_locus_tag=LNP58_05075 NZ_CP086372.1 Protein Homology CDS 1066876 1069038 . + 0 ID=cds-WP_011407649.1;Parent=gene-LNP58_RS05080;Dbxref=Genbank:WP_011407649.1;Name=WP_011407649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429142.1;locus_tag=LNP58_RS05080;product=TonB-dependent receptor;protein_id=WP_011407649.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1069228 1069299 . - . ID=gene-LNP58_RS05085;Name=LNP58_RS05085;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05085;old_locus_tag=LNP58_05080 NZ_CP086372.1 cmsearch ncRNA 1069228 1069299 . - . ID=rna-LNP58_RS05085;Parent=gene-LNP58_RS05085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05085;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1069228 1069299 . - . ID=exon-LNP58_RS05085-1;Parent=rna-LNP58_RS05085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05085;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1069414 1069989 . + . ID=gene-LNP58_RS05090;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LNP58_RS05090;old_locus_tag=LNP58_05085 NZ_CP086372.1 Protein Homology CDS 1069414 1069989 . + 0 ID=cds-WP_011407648.1;Parent=gene-LNP58_RS05090;Dbxref=Genbank:WP_011407648.1;Name=WP_011407648.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348575.1;locus_tag=LNP58_RS05090;product=nicotinamide riboside transporter PnuC;protein_id=WP_011407648.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1070095 1070823 . + . ID=gene-LNP58_RS05095;Name=LNP58_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05095;old_locus_tag=LNP58_05090 NZ_CP086372.1 Protein Homology CDS 1070095 1070823 . + 0 ID=cds-WP_011257733.1;Parent=gene-LNP58_RS05095;Dbxref=Genbank:WP_011257733.1;Name=WP_011257733.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257733.1;locus_tag=LNP58_RS05095;product=UTRA domain-containing protein;protein_id=WP_011257733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1071107 1071186 . - . ID=gene-LNP58_RS05100;Name=LNP58_RS05100;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05100;old_locus_tag=LNP58_05095 NZ_CP086372.1 cmsearch ncRNA 1071107 1071186 . - . ID=rna-LNP58_RS05100;Parent=gene-LNP58_RS05100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05100;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1071107 1071186 . - . ID=exon-LNP58_RS05100-1;Parent=rna-LNP58_RS05100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05100;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1071247 1072086 . - . ID=gene-LNP58_RS05105;Name=LNP58_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05105;old_locus_tag=LNP58_05100 NZ_CP086372.1 Protein Homology CDS 1071247 1072086 . - 0 ID=cds-WP_011257732.1;Parent=gene-LNP58_RS05105;Dbxref=Genbank:WP_011257732.1;Name=WP_011257732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901897.1;locus_tag=LNP58_RS05105;product=hypothetical protein;protein_id=WP_011257732.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1072083 1074395 . - . ID=gene-LNP58_RS05110;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LNP58_RS05110;old_locus_tag=LNP58_05105 NZ_CP086372.1 Protein Homology CDS 1072083 1074395 . - 0 ID=cds-WP_011257731.1;Parent=gene-LNP58_RS05110;Dbxref=Genbank:WP_011257731.1;Name=WP_011257731.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367762.1;locus_tag=LNP58_RS05110;product=type II secretion system secretin GspD;protein_id=WP_011257731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1074392 1075207 . - . ID=gene-LNP58_RS05115;Name=LNP58_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05115;old_locus_tag=LNP58_05110 NZ_CP086372.1 Protein Homology CDS 1074392 1075207 . - 0 ID=cds-WP_011257730.1;Parent=gene-LNP58_RS05115;Dbxref=Genbank:WP_011257730.1;Name=WP_011257730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035909.1;locus_tag=LNP58_RS05115;product=hypothetical protein;protein_id=WP_011257730.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1075197 1075850 . - . ID=gene-LNP58_RS05120;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LNP58_RS05120;old_locus_tag=LNP58_05115 NZ_CP086372.1 Protein Homology CDS 1075197 1075850 . - 0 ID=cds-WP_011407646.1;Parent=gene-LNP58_RS05120;Dbxref=Genbank:WP_011407646.1;Name=WP_011407646.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114570.1;locus_tag=LNP58_RS05120;product=type II secretion system protein GspM;protein_id=WP_011407646.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1075834 1076955 . - . ID=gene-LNP58_RS05125;Name=LNP58_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05125;old_locus_tag=LNP58_05120 NZ_CP086372.1 Protein Homology CDS 1075834 1076955 . - 0 ID=cds-WP_011407645.1;Parent=gene-LNP58_RS05125;Dbxref=Genbank:WP_011407645.1;Name=WP_011407645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504586.1;locus_tag=LNP58_RS05125;product=PilN domain-containing protein;protein_id=WP_011407645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1076952 1077803 . - . ID=gene-LNP58_RS05130;Name=LNP58_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05130;old_locus_tag=LNP58_05125 NZ_CP086372.1 Protein Homology CDS 1076952 1077803 . - 0 ID=cds-WP_011407644.1;Parent=gene-LNP58_RS05130;Dbxref=Genbank:WP_011407644.1;Name=WP_011407644.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158144.1;locus_tag=LNP58_RS05130;product=type II secretion system protein GspK;protein_id=WP_011407644.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1077800 1078435 . - . ID=gene-LNP58_RS05135;Name=LNP58_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05135;old_locus_tag=LNP58_05130 NZ_CP086372.1 Protein Homology CDS 1077800 1078435 . - 0 ID=cds-WP_011257726.1;Parent=gene-LNP58_RS05135;Dbxref=Genbank:WP_011257726.1;Name=WP_011257726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446065.1;locus_tag=LNP58_RS05135;product=type II secretion system protein J;protein_id=WP_011257726.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1078432 1078848 . - . ID=gene-LNP58_RS05140;Name=LNP58_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05140;old_locus_tag=LNP58_05135 NZ_CP086372.1 Protein Homology CDS 1078432 1078848 . - 0 ID=cds-WP_011257725.1;Parent=gene-LNP58_RS05140;Dbxref=Genbank:WP_011257725.1;Name=WP_011257725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257725.1;locus_tag=LNP58_RS05140;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_011257725.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1078845 1079354 . - . ID=gene-LNP58_RS05145;Name=LNP58_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05145;old_locus_tag=LNP58_05140 NZ_CP086372.1 Protein Homology CDS 1078845 1079354 . - 0 ID=cds-WP_011257724.1;Parent=gene-LNP58_RS05145;Dbxref=Genbank:WP_011257724.1;Name=WP_011257724.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920744.1;locus_tag=LNP58_RS05145;product=GspH/FimT family pseudopilin;protein_id=WP_011257724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1079364 1079795 . - . ID=gene-LNP58_RS05150;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LNP58_RS05150;old_locus_tag=LNP58_05145 NZ_CP086372.1 Protein Homology CDS 1079364 1079795 . - 0 ID=cds-WP_011407642.1;Parent=gene-LNP58_RS05150;Dbxref=Genbank:WP_011407642.1;Name=WP_011407642.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490502.1;locus_tag=LNP58_RS05150;product=type II secretion system major pseudopilin GspG;protein_id=WP_011407642.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1080063 1081280 . - . ID=gene-LNP58_RS05155;Name=LNP58_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05155;old_locus_tag=LNP58_05150 NZ_CP086372.1 Protein Homology CDS 1080063 1081280 . - 0 ID=cds-WP_011257722.1;Parent=gene-LNP58_RS05155;Dbxref=Genbank:WP_011257722.1;Name=WP_011257722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504592.1;locus_tag=LNP58_RS05155;product=type II secretion system F family protein;protein_id=WP_011257722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1081280 1081459 . - . ID=gene-LNP58_RS05160;Name=LNP58_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05160;old_locus_tag=LNP58_05155 NZ_CP086372.1 Protein Homology CDS 1081280 1081459 . - 0 ID=cds-WP_041181968.1;Parent=gene-LNP58_RS05160;Dbxref=Genbank:WP_041181968.1;Name=WP_041181968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302117.1;locus_tag=LNP58_RS05160;product=hypothetical protein;protein_id=WP_041181968.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1081456 1083183 . - . ID=gene-LNP58_RS05165;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LNP58_RS05165;old_locus_tag=LNP58_05160 NZ_CP086372.1 Protein Homology CDS 1081456 1083183 . - 0 ID=cds-WP_012446069.1;Parent=gene-LNP58_RS05165;Dbxref=Genbank:WP_012446069.1;Name=WP_012446069.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237945.1;locus_tag=LNP58_RS05165;product=type II secretion system ATPase GspE;protein_id=WP_012446069.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1083313 1084010 . - . ID=gene-LNP58_RS05170;Name=LNP58_RS05170;end_range=1084010,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05170;old_locus_tag=LNP58_05165;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1083313 1084010 . - 0 ID=cds-LNP58_RS05170;Parent=gene-LNP58_RS05170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1084010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920748.1;locus_tag=LNP58_RS05170;partial=true;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1084019 1084975 . - . ID=gene-LNP58_RS05175;Name=LNP58_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05175;old_locus_tag=LNP58_05170 NZ_CP086372.1 Protein Homology CDS 1084019 1084975 . - 0 ID=cds-WP_228329685.1;Parent=gene-LNP58_RS05175;Dbxref=Genbank:WP_228329685.1;Name=WP_228329685.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS05175;product=IS30 family transposase;protein_id=WP_228329685.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1085066 1086253 . - . ID=gene-LNP58_RS05180;Name=LNP58_RS05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05180;old_locus_tag=LNP58_05175;partial=true;pseudo=true;start_range=.,1085066 NZ_CP086372.1 Protein Homology CDS 1085066 1086253 . - 0 ID=cds-LNP58_RS05180;Parent=gene-LNP58_RS05180;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920748.1;locus_tag=LNP58_RS05180;partial=true;product=S8 family serine peptidase;pseudo=true;start_range=.,1085066;transl_table=11 NZ_CP086372.1 RefSeq gene 1086474 1090271 . - . ID=gene-LNP58_RS05185;Name=LNP58_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05185;old_locus_tag=LNP58_05180 NZ_CP086372.1 Protein Homology CDS 1086474 1090271 . - 0 ID=cds-WP_069959728.1;Parent=gene-LNP58_RS05185;Dbxref=Genbank:WP_069959728.1;Name=WP_069959728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113272.1;locus_tag=LNP58_RS05185;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_069959728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1091249 1095301 . - . ID=gene-LNP58_RS05190;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LNP58_RS05190;old_locus_tag=LNP58_05185 NZ_CP086372.1 Protein Homology CDS 1091249 1095301 . - 0 ID=cds-WP_011257719.1;Parent=gene-LNP58_RS05190;Dbxref=Genbank:WP_011257719.1;Name=WP_011257719.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367790.1;locus_tag=LNP58_RS05190;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_011257719.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1095700 1096497 . - . ID=gene-LNP58_RS05195;Name=LNP58_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05195;old_locus_tag=LNP58_05190 NZ_CP086372.1 Protein Homology CDS 1095700 1096497 . - 0 ID=cds-WP_011257718.1;Parent=gene-LNP58_RS05195;Dbxref=Genbank:WP_011257718.1;Name=WP_011257718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490215.1;locus_tag=LNP58_RS05195;product=DsbC family protein;protein_id=WP_011257718.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1096967 1097938 . - . ID=gene-LNP58_RS05200;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LNP58_RS05200;old_locus_tag=LNP58_05195 NZ_CP086372.1 Protein Homology CDS 1096967 1097938 . - 0 ID=cds-WP_011257717.1;Parent=gene-LNP58_RS05200;Dbxref=Genbank:WP_011257717.1;Name=WP_011257717.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932805.1;locus_tag=LNP58_RS05200;product=site-specific tyrosine recombinase XerD;protein_id=WP_011257717.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1098365 1098832 . + . ID=gene-LNP58_RS05205;Name=LNP58_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05205;old_locus_tag=LNP58_05200 NZ_CP086372.1 Protein Homology CDS 1098365 1098832 . + 0 ID=cds-WP_011257716.1;Parent=gene-LNP58_RS05205;Dbxref=Genbank:WP_011257716.1;Name=WP_011257716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913488.1;locus_tag=LNP58_RS05205;product=RDD family protein;protein_id=WP_011257716.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1098943 1099242 . - . ID=gene-LNP58_RS05210;Name=LNP58_RS05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05210;old_locus_tag=LNP58_05205;pseudo=true NZ_CP086372.1 Protein Homology CDS 1098943 1099242 . - 0 ID=cds-LNP58_RS05210;Parent=gene-LNP58_RS05210;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091062.1;locus_tag=LNP58_RS05210;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1099247 1100353 . - . ID=gene-LNP58_RS05215;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LNP58_RS05215;old_locus_tag=LNP58_05210 NZ_CP086372.1 Protein Homology CDS 1099247 1100353 . - 0 ID=cds-WP_011407635.1;Parent=gene-LNP58_RS05215;Dbxref=Genbank:WP_011407635.1;Name=WP_011407635.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964177.1;locus_tag=LNP58_RS05215;product=LPS export ABC transporter permease LptG;protein_id=WP_011407635.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1100350 1101432 . - . ID=gene-LNP58_RS05220;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LNP58_RS05220;old_locus_tag=LNP58_05215 NZ_CP086372.1 Protein Homology CDS 1100350 1101432 . - 0 ID=cds-WP_011407634.1;Parent=gene-LNP58_RS05220;Dbxref=Genbank:WP_011407634.1;Name=WP_011407634.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052356.1;locus_tag=LNP58_RS05220;product=LPS export ABC transporter permease LptF;protein_id=WP_011407634.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1101540 1103012 . + . ID=gene-LNP58_RS05225;Name=LNP58_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05225;old_locus_tag=LNP58_05220 NZ_CP086372.1 Protein Homology CDS 1101540 1103012 . + 0 ID=cds-WP_011257713.1;Parent=gene-LNP58_RS05225;Dbxref=Genbank:WP_011257713.1;Name=WP_011257713.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257713.1;locus_tag=LNP58_RS05225;product=leucyl aminopeptidase;protein_id=WP_011257713.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1103012 1103317 . + . ID=gene-LNP58_RS05230;Name=LNP58_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05230;old_locus_tag=LNP58_05225 NZ_CP086372.1 Protein Homology CDS 1103012 1103317 . + 0 ID=cds-WP_011257712.1;Parent=gene-LNP58_RS05230;Dbxref=Genbank:WP_011257712.1;Name=WP_011257712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257712.1;locus_tag=LNP58_RS05230;product=hypothetical protein;protein_id=WP_011257712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1103358 1103783 . + . ID=gene-LNP58_RS05235;Name=LNP58_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05235;old_locus_tag=LNP58_05230 NZ_CP086372.1 Protein Homology CDS 1103358 1103783 . + 0 ID=cds-WP_011257711.1;Parent=gene-LNP58_RS05235;Dbxref=Genbank:WP_011257711.1;Name=WP_011257711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902887.1;locus_tag=LNP58_RS05235;product=DNA polymerase III subunit chi;protein_id=WP_011257711.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1103991 1106933 . + . ID=gene-LNP58_RS05240;Name=LNP58_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05240;old_locus_tag=LNP58_05235 NZ_CP086372.1 Protein Homology CDS 1103991 1106933 . + 0 ID=cds-WP_011257710.1;Parent=gene-LNP58_RS05240;Dbxref=Genbank:WP_011257710.1;Name=WP_011257710.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159789.1;locus_tag=LNP58_RS05240;product=valine--tRNA ligase;protein_id=WP_011257710.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1107064 1107243 . + . ID=gene-LNP58_RS05245;Name=LNP58_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05245;old_locus_tag=LNP58_05240 NZ_CP086372.1 Protein Homology CDS 1107064 1107243 . + 0 ID=cds-WP_012446080.1;Parent=gene-LNP58_RS05245;Dbxref=Genbank:WP_012446080.1;Name=WP_012446080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016107.2;locus_tag=LNP58_RS05245;product=methyltransferase;protein_id=WP_012446080.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1107485 1107811 . + . ID=gene-LNP58_RS05250;Name=LNP58_RS05250;end_range=1107811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05250;old_locus_tag=LNP58_05245;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1107485 1107811 . + 0 ID=cds-LNP58_RS05250;Parent=gene-LNP58_RS05250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1107811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS05250;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1107930 1108972 . + . ID=gene-LNP58_RS05255;Name=LNP58_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05255;old_locus_tag=LNP58_05250 NZ_CP086372.1 Protein Homology CDS 1107930 1108125 . + 0 ID=cds-WP_229001939.1;Parent=gene-LNP58_RS05255;Dbxref=Genbank:WP_229001939.1;Name=WP_229001939.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS05255;product=IS3 family transposase;protein_id=WP_229001939.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1108125 1108972 . + 2 ID=cds-WP_229001939.1;Parent=gene-LNP58_RS05255;Dbxref=Genbank:WP_229001939.1;Name=WP_229001939.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS05255;product=IS3 family transposase;protein_id=WP_229001939.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1109165 1109473 . + . ID=gene-LNP58_RS05260;Name=LNP58_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05260;old_locus_tag=LNP58_05255 NZ_CP086372.1 Protein Homology CDS 1109165 1109473 . + 0 ID=cds-WP_228329734.1;Parent=gene-LNP58_RS05260;Dbxref=Genbank:WP_228329734.1;Name=WP_228329734.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF019846.2;locus_tag=LNP58_RS05260;product=methyltransferase domain-containing protein;protein_id=WP_228329734.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1109540 1110115 . - . ID=gene-LNP58_RS05265;Name=LNP58_RS05265;end_range=1110115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05265;old_locus_tag=LNP58_05260;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1109540 1110115 . - 0 ID=cds-LNP58_RS05265;Parent=gene-LNP58_RS05265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1110115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05265;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1110125 1110923 . - . ID=gene-LNP58_RS05270;Name=LNP58_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05270;old_locus_tag=LNP58_05265 NZ_CP086372.1 Protein Homology CDS 1110652 1110923 . - 0 ID=cds-WP_094187731.1;Parent=gene-LNP58_RS05270;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS05270;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1110125 1110653 . - 1 ID=cds-WP_094187731.1;Parent=gene-LNP58_RS05270;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS05270;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1110970 1111620 . + . ID=gene-LNP58_RS05275;Name=LNP58_RS05275;end_range=1111620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05275;old_locus_tag=LNP58_05270;partial=true;pseudo=true;start_range=.,1110970 NZ_CP086372.1 Protein Homology CDS 1110970 1111620 . + 0 ID=cds-LNP58_RS05275;Parent=gene-LNP58_RS05275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1111620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05275;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,1110970;transl_table=11 NZ_CP086372.1 RefSeq gene 1111745 1112713 . - . ID=gene-LNP58_RS05280;Name=LNP58_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05280;old_locus_tag=LNP58_05275 NZ_CP086372.1 Protein Homology CDS 1111745 1112713 . - 0 ID=cds-WP_011258802.1-7;Parent=gene-LNP58_RS05280;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS05280;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1112775 1113353 . + . ID=gene-LNP58_RS05285;Name=LNP58_RS05285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05285;old_locus_tag=LNP58_05280;partial=true;pseudo=true;start_range=.,1112775 NZ_CP086372.1 Protein Homology CDS 1112775 1113353 . + 0 ID=cds-LNP58_RS05285;Parent=gene-LNP58_RS05285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05285;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,1112775;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1113579 1114713 . + . ID=gene-LNP58_RS05290;Name=LNP58_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05290;old_locus_tag=LNP58_05285;pseudo=true NZ_CP086372.1 Protein Homology CDS 1113579 1114713 . + 0 ID=cds-LNP58_RS05290;Parent=gene-LNP58_RS05290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159791.1;locus_tag=LNP58_RS05290;product=pectate lyase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1114980 1116953 . - . ID=gene-LNP58_RS05295;Name=LNP58_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05295;old_locus_tag=LNP58_05290 NZ_CP086372.1 Protein Homology CDS 1114980 1116953 . - 0 ID=cds-WP_027704044.1;Parent=gene-LNP58_RS05295;Dbxref=Genbank:WP_027704044.1;Name=WP_027704044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117455.1;locus_tag=LNP58_RS05295;product=transglycosylase SLT domain-containing protein;protein_id=WP_027704044.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1117258 1118577 . + . ID=gene-LNP58_RS05300;Name=LNP58_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05300;old_locus_tag=LNP58_05295 NZ_CP086372.1 Protein Homology CDS 1117258 1118577 . + 0 ID=cds-WP_228329683.1;Parent=gene-LNP58_RS05300;Dbxref=Genbank:WP_228329683.1;Name=WP_228329683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05300;product=IS701-like element ISXo15 family transposase;protein_id=WP_228329683.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1118727 1119695 . + . ID=gene-LNP58_RS05305;Name=LNP58_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05305;old_locus_tag=LNP58_05300 NZ_CP086372.1 Protein Homology CDS 1118727 1119695 . + 0 ID=cds-WP_011407627.1;Parent=gene-LNP58_RS05305;Dbxref=Genbank:WP_011407627.1;Name=WP_011407627.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS05305;product=IS5-like element ISXo1 family transposase;protein_id=WP_011407627.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1119908 1121231 . - . ID=gene-LNP58_RS05310;Name=LNP58_RS05310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05310;old_locus_tag=LNP58_05305;pseudo=true NZ_CP086372.1 Protein Homology CDS 1119908 1121231 . - 0 ID=cds-LNP58_RS05310;Parent=gene-LNP58_RS05310;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05310;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1121389 1122708 . - . ID=gene-LNP58_RS05315;Name=LNP58_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05315;old_locus_tag=LNP58_05310 NZ_CP086372.1 Protein Homology CDS 1121389 1122708 . - 0 ID=cds-WP_109182079.1;Parent=gene-LNP58_RS05315;Dbxref=Genbank:WP_109182079.1;Name=WP_109182079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05315;product=IS701 family transposase;protein_id=WP_109182079.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1123267 1123749 . - . ID=gene-LNP58_RS05320;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LNP58_RS05320;old_locus_tag=LNP58_05315 NZ_CP086372.1 Protein Homology CDS 1123267 1123749 . - 0 ID=cds-WP_011407624.1;Parent=gene-LNP58_RS05320;Dbxref=Genbank:WP_011407624.1;Name=WP_011407624.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768432.1;locus_tag=LNP58_RS05320;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_011407624.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1123746 1124189 . - . ID=gene-LNP58_RS05325;Name=LNP58_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05325;old_locus_tag=LNP58_05320 NZ_CP086372.1 Protein Homology CDS 1123746 1124189 . - 0 ID=cds-WP_171970793.1;Parent=gene-LNP58_RS05325;Dbxref=Genbank:WP_171970793.1;Name=WP_171970793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913473.1;locus_tag=LNP58_RS05325;product=alanine acetyltransferase;protein_id=WP_171970793.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1124224 1124997 . - . ID=gene-LNP58_RS05330;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LNP58_RS05330;old_locus_tag=LNP58_05325 NZ_CP086372.1 Protein Homology CDS 1124224 1124997 . - 0 ID=cds-WP_011407623.1;Parent=gene-LNP58_RS05330;Dbxref=Genbank:WP_011407623.1;Name=WP_011407623.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991773.1;locus_tag=LNP58_RS05330;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_011407623.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1125129 1125533 . + . ID=gene-LNP58_RS05335;Name=LNP58_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05335;old_locus_tag=LNP58_05330 NZ_CP086372.1 Protein Homology CDS 1125129 1125533 . + 0 ID=cds-WP_011257694.1;Parent=gene-LNP58_RS05335;Dbxref=Genbank:WP_011257694.1;Name=WP_011257694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446090.1;locus_tag=LNP58_RS05335;product=DUF4124 domain-containing protein;protein_id=WP_011257694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1125645 1127339 . + . ID=gene-LNP58_RS05340;Name=LNP58_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05340;old_locus_tag=LNP58_05335 NZ_CP086372.1 Protein Homology CDS 1125645 1127339 . + 0 ID=cds-WP_011257693.1;Parent=gene-LNP58_RS05340;Dbxref=Genbank:WP_011257693.1;Name=WP_011257693.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902894.1;locus_tag=LNP58_RS05340;product=proline--tRNA ligase;protein_id=WP_011257693.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1127482 1127943 . + . ID=gene-LNP58_RS05345;Name=LNP58_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05345;old_locus_tag=LNP58_05340 NZ_CP086372.1 Protein Homology CDS 1127482 1127943 . + 0 ID=cds-WP_011407621.1;Parent=gene-LNP58_RS05345;Dbxref=Genbank:WP_011407621.1;Name=WP_011407621.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407621.1;locus_tag=LNP58_RS05345;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_011407621.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1128005 1129264 . - . ID=gene-LNP58_RS05350;Name=LNP58_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05350;old_locus_tag=LNP58_05345 NZ_CP086372.1 Protein Homology CDS 1128005 1129264 . - 0 ID=cds-WP_011257691.1;Parent=gene-LNP58_RS05350;Dbxref=Genbank:WP_011257691.1;Name=WP_011257691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506577.1;locus_tag=LNP58_RS05350;product=threonine/serine exporter family protein;protein_id=WP_011257691.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1129434 1130546 . + . ID=gene-LNP58_RS05355;Name=LNP58_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05355;old_locus_tag=LNP58_05350 NZ_CP086372.1 Protein Homology CDS 1129434 1130546 . + 0 ID=cds-WP_011407620.1;Parent=gene-LNP58_RS05355;Dbxref=Genbank:WP_011407620.1;Name=WP_011407620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813964.1;locus_tag=LNP58_RS05355;product=ABC transporter permease;protein_id=WP_011407620.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1130632 1131474 . + . ID=gene-LNP58_RS05360;Name=LNP58_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05360;old_locus_tag=LNP58_05355 NZ_CP086372.1 Protein Homology CDS 1130632 1131474 . + 0 ID=cds-WP_011257689.1;Parent=gene-LNP58_RS05360;Dbxref=Genbank:WP_011257689.1;Name=WP_011257689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969506.1;locus_tag=LNP58_RS05360;product=ABC transporter ATP-binding protein;protein_id=WP_011257689.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1131477 1132403 . + . ID=gene-LNP58_RS05365;Name=LNP58_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05365;old_locus_tag=LNP58_05360 NZ_CP086372.1 Protein Homology CDS 1131477 1132403 . + 0 ID=cds-WP_011257688.1;Parent=gene-LNP58_RS05365;Dbxref=Genbank:WP_011257688.1;Name=WP_011257688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903957.1;locus_tag=LNP58_RS05365;product=MlaD family protein;protein_id=WP_011257688.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1132400 1133044 . + . ID=gene-LNP58_RS05370;Name=LNP58_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05370;old_locus_tag=LNP58_05365 NZ_CP086372.1 Protein Homology CDS 1132400 1133044 . + 0 ID=cds-WP_011257687.1;Parent=gene-LNP58_RS05370;Dbxref=Genbank:WP_011257687.1;Name=WP_011257687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257687.1;locus_tag=LNP58_RS05370;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_011257687.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1133595 1134203 . - . ID=gene-LNP58_RS05375;Name=LNP58_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05375;old_locus_tag=LNP58_05370 NZ_CP086372.1 Protein Homology CDS 1133595 1134203 . - 0 ID=cds-WP_011257686.1;Parent=gene-LNP58_RS05375;Dbxref=Genbank:WP_011257686.1;Name=WP_011257686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257686.1;locus_tag=LNP58_RS05375;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_011257686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1134319 1135968 . + . ID=gene-LNP58_RS05380;Name=LNP58_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05380;old_locus_tag=LNP58_05375 NZ_CP086372.1 Protein Homology CDS 1134319 1135968 . + 0 ID=cds-WP_012446093.1;Parent=gene-LNP58_RS05380;Dbxref=Genbank:WP_012446093.1;Name=WP_012446093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348604.1;locus_tag=LNP58_RS05380;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_012446093.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1135965 1138052 . + . ID=gene-LNP58_RS05385;Name=LNP58_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05385;old_locus_tag=LNP58_05380 NZ_CP086372.1 Protein Homology CDS 1135965 1138052 . + 0 ID=cds-WP_011407618.1;Parent=gene-LNP58_RS05385;Dbxref=Genbank:WP_011407618.1;Name=WP_011407618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158246.1;locus_tag=LNP58_RS05385;product=glycoside hydrolase family 99-like domain-containing protein;protein_id=WP_011407618.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1138110 1138739 . - . ID=gene-LNP58_RS05390;Name=LNP58_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05390;old_locus_tag=LNP58_05385 NZ_CP086372.1 Protein Homology CDS 1138110 1138739 . - 0 ID=cds-WP_011257683.1;Parent=gene-LNP58_RS05390;Dbxref=Genbank:WP_011257683.1;Name=WP_011257683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158247.1;locus_tag=LNP58_RS05390;product=CoA transferase subunit B;protein_id=WP_011257683.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1138739 1139470 . - . ID=gene-LNP58_RS05395;Name=LNP58_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05395;old_locus_tag=LNP58_05390 NZ_CP086372.1 Protein Homology CDS 1138739 1139470 . - 0 ID=cds-WP_011407617.1;Parent=gene-LNP58_RS05395;Dbxref=Genbank:WP_011407617.1;Name=WP_011407617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484175.1;locus_tag=LNP58_RS05395;product=CoA transferase subunit A;protein_id=WP_011407617.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1139604 1140950 . + . ID=gene-LNP58_RS05400;Name=LNP58_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05400;old_locus_tag=LNP58_05395 NZ_CP086372.1 Protein Homology CDS 1139604 1140950 . + 0 ID=cds-WP_011407616.1;Parent=gene-LNP58_RS05400;Dbxref=Genbank:WP_011407616.1;Name=WP_011407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303601.1;locus_tag=LNP58_RS05400;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_011407616.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1140997 1142400 . + . ID=gene-LNP58_RS05405;Name=LNP58_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05405;old_locus_tag=LNP58_05400 NZ_CP086372.1 Protein Homology CDS 1140997 1142400 . + 0 ID=cds-WP_011257680.1;Parent=gene-LNP58_RS05405;Dbxref=Genbank:WP_011257680.1;Name=WP_011257680.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850199.1;locus_tag=LNP58_RS05405;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_011257680.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1142517 1143425 . - . ID=gene-LNP58_RS05410;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LNP58_RS05410;old_locus_tag=LNP58_05405 NZ_CP086372.1 Protein Homology CDS 1142517 1143425 . - 0 ID=cds-WP_011407615.1;Parent=gene-LNP58_RS05410;Dbxref=Genbank:WP_011407615.1;Name=WP_011407615.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446096.1;locus_tag=LNP58_RS05410;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_011407615.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1143422 1143979 . - . ID=gene-LNP58_RS05415;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LNP58_RS05415;old_locus_tag=LNP58_05410 NZ_CP086372.1 Protein Homology CDS 1143422 1143979 . - 0 ID=cds-WP_011407614.1;Parent=gene-LNP58_RS05415;Dbxref=Genbank:WP_011407614.1;Name=WP_011407614.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377788.1;locus_tag=LNP58_RS05415;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_011407614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1143976 1144863 . - . ID=gene-LNP58_RS05420;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LNP58_RS05420;old_locus_tag=LNP58_05415 NZ_CP086372.1 Protein Homology CDS 1143976 1144863 . - 0 ID=cds-WP_011407613.1;Parent=gene-LNP58_RS05420;Dbxref=Genbank:WP_011407613.1;Name=WP_011407613.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=LNP58_RS05420;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_011407613.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1144919 1145974 . - . ID=gene-LNP58_RS05425;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LNP58_RS05425;old_locus_tag=LNP58_05420 NZ_CP086372.1 Protein Homology CDS 1144919 1145974 . - 0 ID=cds-WP_011407612.1;Parent=gene-LNP58_RS05425;Dbxref=Genbank:WP_011407612.1;Name=WP_011407612.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407612.1;locus_tag=LNP58_RS05425;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_011407612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1146200 1146946 . + . ID=gene-LNP58_RS05430;Name=LNP58_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05430;old_locus_tag=LNP58_05425 NZ_CP086372.1 Protein Homology CDS 1146200 1146946 . + 0 ID=cds-WP_011257675.1;Parent=gene-LNP58_RS05430;Dbxref=Genbank:WP_011257675.1;Name=WP_011257675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182580.1;locus_tag=LNP58_RS05430;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_011257675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1146946 1147887 . + . ID=gene-LNP58_RS05435;Name=LNP58_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05435;old_locus_tag=LNP58_05430 NZ_CP086372.1 Protein Homology CDS 1146946 1147887 . + 0 ID=cds-WP_069959723.1;Parent=gene-LNP58_RS05435;Dbxref=Genbank:WP_069959723.1;Name=WP_069959723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257674.1;locus_tag=LNP58_RS05435;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_069959723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1148110 1148928 . + . ID=gene-LNP58_RS05440;Name=LNP58_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05440;old_locus_tag=LNP58_05435 NZ_CP086372.1 Protein Homology CDS 1148110 1148928 . + 0 ID=cds-WP_011407611.1;Parent=gene-LNP58_RS05440;Dbxref=Genbank:WP_011407611.1;Name=WP_011407611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446100.1;locus_tag=LNP58_RS05440;product=ABC transporter permease;protein_id=WP_011407611.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1148918 1150231 . + . ID=gene-LNP58_RS05445;Name=LNP58_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05445;old_locus_tag=LNP58_05440 NZ_CP086372.1 Protein Homology CDS 1148918 1150231 . + 0 ID=cds-WP_011407610.1;Parent=gene-LNP58_RS05445;Dbxref=Genbank:WP_011407610.1;Name=WP_011407610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407610.1;locus_tag=LNP58_RS05445;product=ABC transporter ATP-binding protein;protein_id=WP_011407610.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1150341 1150643 . - . ID=gene-LNP58_RS05450;Name=LNP58_RS05450;end_range=1150643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05450;old_locus_tag=LNP58_05445;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1150341 1150643 . - 0 ID=cds-LNP58_RS05450;Parent=gene-LNP58_RS05450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1150643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS05450;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1150761 1151945 . - . ID=gene-LNP58_RS05455;Name=LNP58_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05455;old_locus_tag=LNP58_05450 NZ_CP086372.1 Protein Homology CDS 1150761 1151945 . - 0 ID=cds-WP_011407609.1-2;Parent=gene-LNP58_RS05455;Dbxref=Genbank:WP_011407609.1;Name=WP_011407609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS05455;product=IS256-like element IS1113 family transposase;protein_id=WP_011407609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1152261 1153580 . - . ID=gene-LNP58_RS05460;Name=LNP58_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05460;old_locus_tag=LNP58_05455 NZ_CP086372.1 Protein Homology CDS 1152261 1153580 . - 0 ID=cds-WP_109182077.1;Parent=gene-LNP58_RS05460;Dbxref=Genbank:WP_109182077.1;Name=WP_109182077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS05460;product=IS701-like element ISXo15 family transposase;protein_id=WP_109182077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1153667 1154719 . - . ID=gene-LNP58_RS05465;Name=LNP58_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05465;old_locus_tag=LNP58_05460 NZ_CP086372.1 Protein Homology CDS 1153667 1154719 . - 0 ID=cds-WP_011257669.1;Parent=gene-LNP58_RS05465;Dbxref=Genbank:WP_011257669.1;Name=WP_011257669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257669.1;locus_tag=LNP58_RS05465;product=acyltransferase;protein_id=WP_011257669.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1154725 1155879 . - . ID=gene-LNP58_RS05470;Name=LNP58_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05470;old_locus_tag=LNP58_05465 NZ_CP086372.1 Protein Homology CDS 1154725 1155879 . - 0 ID=cds-WP_228329682.1;Parent=gene-LNP58_RS05470;Dbxref=Genbank:WP_228329682.1;Name=WP_228329682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257668.1;locus_tag=LNP58_RS05470;product=glycosyltransferase;protein_id=WP_228329682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1155879 1156169 . - . ID=gene-LNP58_RS05475;Name=LNP58_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05475;old_locus_tag=LNP58_05470 NZ_CP086372.1 Protein Homology CDS 1155879 1156169 . - 0 ID=cds-WP_024744691.1;Parent=gene-LNP58_RS05475;Dbxref=Genbank:WP_024744691.1;Name=WP_024744691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015446796.1;locus_tag=LNP58_RS05475;product=hypothetical protein;protein_id=WP_024744691.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1156190 1158151 . - . ID=gene-LNP58_RS05480;Name=LNP58_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05480;old_locus_tag=LNP58_05475 NZ_CP086372.1 Protein Homology CDS 1156190 1158151 . - 0 ID=cds-WP_228329681.1;Parent=gene-LNP58_RS05480;Dbxref=Genbank:WP_228329681.1;Name=WP_228329681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015446795.1;locus_tag=LNP58_RS05480;product=glycosyltransferase;protein_id=WP_228329681.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1158148 1159224 . - . ID=gene-LNP58_RS05485;Name=LNP58_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05485;old_locus_tag=LNP58_05480 NZ_CP086372.1 Protein Homology CDS 1158148 1159224 . - 0 ID=cds-WP_011407605.1;Parent=gene-LNP58_RS05485;Dbxref=Genbank:WP_011407605.1;Name=WP_011407605.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407605.1;locus_tag=LNP58_RS05485;product=SDR family oxidoreductase;protein_id=WP_011407605.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1159259 1159987 . - . ID=gene-LNP58_RS05490;Name=LNP58_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05490;old_locus_tag=LNP58_05485 NZ_CP086372.1 Protein Homology CDS 1159259 1159987 . - 0 ID=cds-WP_011407604.1;Parent=gene-LNP58_RS05490;Dbxref=Genbank:WP_011407604.1;Name=WP_011407604.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446105.1;locus_tag=LNP58_RS05490;product=FkbM family methyltransferase;protein_id=WP_011407604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1160106 1161299 . - . ID=gene-LNP58_RS05495;Name=LNP58_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05495;old_locus_tag=LNP58_05490 NZ_CP086372.1 Protein Homology CDS 1160106 1161299 . - 0 ID=cds-WP_011257665.1;Parent=gene-LNP58_RS05495;Dbxref=Genbank:WP_011257665.1;Name=WP_011257665.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301785.1;locus_tag=LNP58_RS05495;product=cystathionine gamma-synthase;protein_id=WP_011257665.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1161390 1162760 . - . ID=gene-LNP58_RS05500;Name=LNP58_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05500;old_locus_tag=LNP58_05495 NZ_CP086372.1 Protein Homology CDS 1161390 1162760 . - 0 ID=cds-WP_011407603.1;Parent=gene-LNP58_RS05500;Dbxref=Genbank:WP_011407603.1;Name=WP_011407603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=LNP58_RS05500;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_011407603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1163002 1163220 . - . ID=gene-LNP58_RS05505;Name=LNP58_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05505;old_locus_tag=LNP58_05500 NZ_CP086372.1 Protein Homology CDS 1163002 1163220 . - 0 ID=cds-WP_003484103.1;Parent=gene-LNP58_RS05505;Dbxref=Genbank:WP_003484103.1;Name=WP_003484103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=LNP58_RS05505;product=YdcH family protein;protein_id=WP_003484103.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1163562 1164452 . - . ID=gene-LNP58_RS05510;Name=LNP58_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05510;old_locus_tag=LNP58_05505 NZ_CP086372.1 Protein Homology CDS 1163562 1164452 . - 0 ID=cds-WP_011257662.1;Parent=gene-LNP58_RS05510;Dbxref=Genbank:WP_011257662.1;Name=WP_011257662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161845.1;locus_tag=LNP58_RS05510;product=membrane protein;protein_id=WP_011257662.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1164449 1164832 . - . ID=gene-LNP58_RS05515;Name=LNP58_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05515;old_locus_tag=LNP58_05510 NZ_CP086372.1 Protein Homology CDS 1164449 1164832 . - 0 ID=cds-WP_011407602.1;Parent=gene-LNP58_RS05515;Dbxref=Genbank:WP_011407602.1;Name=WP_011407602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914753.1;locus_tag=LNP58_RS05515;product=DUF4398 domain-containing protein;protein_id=WP_011407602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1164931 1166064 . + . ID=gene-LNP58_RS05520;Name=LNP58_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05520;old_locus_tag=LNP58_05515 NZ_CP086372.1 Protein Homology CDS 1164931 1166064 . + 0 ID=cds-WP_011407601.1;Parent=gene-LNP58_RS05520;Dbxref=Genbank:WP_011407601.1;Name=WP_011407601.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914752.1;locus_tag=LNP58_RS05520;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_011407601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1166403 1167029 . - . ID=gene-LNP58_RS05525;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LNP58_RS05525;old_locus_tag=LNP58_05520 NZ_CP086372.1 Protein Homology CDS 1166403 1167029 . - 0 ID=cds-WP_042464484.1;Parent=gene-LNP58_RS05525;Dbxref=Genbank:WP_042464484.1;Name=WP_042464484.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301779.1;locus_tag=LNP58_RS05525;product=maleylacetoacetate isomerase;protein_id=WP_042464484.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1167073 1168131 . - . ID=gene-LNP58_RS05530;Name=LNP58_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05530;old_locus_tag=LNP58_05525 NZ_CP086372.1 Protein Homology CDS 1167073 1168131 . - 0 ID=cds-WP_178383140.1;Parent=gene-LNP58_RS05530;Dbxref=Genbank:WP_178383140.1;Name=WP_178383140.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160204.1;locus_tag=LNP58_RS05530;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_178383140.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1168442 1169824 . + . ID=gene-LNP58_RS05535;Name=LNP58_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05535;old_locus_tag=LNP58_05530 NZ_CP086372.1 Protein Homology CDS 1168442 1169824 . + 0 ID=cds-WP_011407600.1;Parent=gene-LNP58_RS05535;Dbxref=Genbank:WP_011407600.1;Name=WP_011407600.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446112.1;locus_tag=LNP58_RS05535;product=DEAD/DEAH box helicase;protein_id=WP_011407600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1170237 1170590 . + . ID=gene-LNP58_RS05540;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LNP58_RS05540;old_locus_tag=LNP58_05535 NZ_CP086372.1 Protein Homology CDS 1170237 1170590 . + 0 ID=cds-WP_027703598.1;Parent=gene-LNP58_RS05540;Dbxref=Genbank:WP_027703598.1;Name=WP_027703598.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900974.1;locus_tag=LNP58_RS05540;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_027703598.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1170783 1171118 . + . ID=gene-LNP58_RS05545;Name=LNP58_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05545;old_locus_tag=LNP58_05540 NZ_CP086372.1 Protein Homology CDS 1170783 1171118 . + 0 ID=cds-WP_011407598.1;Parent=gene-LNP58_RS05545;Dbxref=Genbank:WP_011407598.1;Name=WP_011407598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158777.1;locus_tag=LNP58_RS05545;product=phasin family protein;protein_id=WP_011407598.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1171233 1171907 . - . ID=gene-LNP58_RS05550;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LNP58_RS05550;old_locus_tag=LNP58_05545 NZ_CP086372.1 Protein Homology CDS 1171233 1171907 . - 0 ID=cds-WP_011407597.1;Parent=gene-LNP58_RS05550;Dbxref=Genbank:WP_011407597.1;Name=WP_011407597.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157245.1;locus_tag=LNP58_RS05550;product=dethiobiotin synthase;protein_id=WP_011407597.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1172232 1172714 . + . ID=gene-LNP58_RS05555;Name=LNP58_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05555;old_locus_tag=LNP58_05550 NZ_CP086372.1 Protein Homology CDS 1172232 1172714 . + 0 ID=cds-WP_011407596.1;Parent=gene-LNP58_RS05555;Dbxref=Genbank:WP_011407596.1;Name=WP_011407596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407596.1;locus_tag=LNP58_RS05555;product=GAF domain-containing protein;protein_id=WP_011407596.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1172711 1173109 . + . ID=gene-LNP58_RS05560;Name=LNP58_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05560;old_locus_tag=LNP58_05555 NZ_CP086372.1 Protein Homology CDS 1172711 1173109 . + 0 ID=cds-WP_011257653.1;Parent=gene-LNP58_RS05560;Dbxref=Genbank:WP_011257653.1;Name=WP_011257653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157242.1;locus_tag=LNP58_RS05560;product=TfoX/Sxy family protein;protein_id=WP_011257653.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1173421 1174071 . - . ID=gene-LNP58_RS05565;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=LNP58_RS05565;old_locus_tag=LNP58_05560 NZ_CP086372.1 Protein Homology CDS 1173421 1174071 . - 0 ID=cds-WP_011407595.1;Parent=gene-LNP58_RS05565;Dbxref=Genbank:WP_011407595.1;Name=WP_011407595.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0008152,GO:0009853,GO:0043094,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=metabolic process|0008152||IEA,photorespiration|0009853||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348635.1;locus_tag=LNP58_RS05565;product=phosphoglycolate phosphatase;protein_id=WP_011407595.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1174213 1175292 . - . ID=gene-LNP58_RS05570;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LNP58_RS05570;old_locus_tag=LNP58_05565 NZ_CP086372.1 Protein Homology CDS 1174213 1175292 . - 0 ID=cds-WP_011407594.1;Parent=gene-LNP58_RS05570;Dbxref=Genbank:WP_011407594.1;Name=WP_011407594.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157240.1;locus_tag=LNP58_RS05570;product=DNA polymerase IV;protein_id=WP_011407594.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1175638 1176153 . + . ID=gene-LNP58_RS05575;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LNP58_RS05575;old_locus_tag=LNP58_05570 NZ_CP086372.1 Protein Homology CDS 1175638 1176153 . + 0 ID=cds-WP_011407593.1;Parent=gene-LNP58_RS05575;Dbxref=Genbank:WP_011407593.1;Name=WP_011407593.1;Ontology_term=GO:0019171;gbkey=CDS;gene=fabA;go_function=3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035827.1;locus_tag=LNP58_RS05575;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=WP_011407593.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1176153 1177361 . + . ID=gene-LNP58_RS05580;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=LNP58_RS05580;old_locus_tag=LNP58_05575 NZ_CP086372.1 Protein Homology CDS 1176153 1177361 . + 0 ID=cds-WP_011257649.1;Parent=gene-LNP58_RS05580;Dbxref=Genbank:WP_011257649.1;Name=WP_011257649.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237990.1;locus_tag=LNP58_RS05580;product=beta-ketoacyl-ACP synthase I;protein_id=WP_011257649.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1177475 1178296 . - . ID=gene-LNP58_RS05585;Name=LNP58_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05585;old_locus_tag=LNP58_05580 NZ_CP086372.1 Protein Homology CDS 1177475 1178296 . - 0 ID=cds-WP_033013277.1;Parent=gene-LNP58_RS05585;Dbxref=Genbank:WP_033013277.1;Name=WP_033013277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504674.1;locus_tag=LNP58_RS05585;product=hypothetical protein;protein_id=WP_033013277.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1178470 1180494 . - . ID=gene-LNP58_RS05590;Name=LNP58_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05590;old_locus_tag=LNP58_05585 NZ_CP086372.1 Protein Homology CDS 1178470 1180494 . - 0 ID=cds-WP_069959722.1;Parent=gene-LNP58_RS05590;Dbxref=Genbank:WP_069959722.1;Name=WP_069959722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304766.1;locus_tag=LNP58_RS05590;product=M3 family metallopeptidase;protein_id=WP_069959722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1180538 1181641 . - . ID=gene-LNP58_RS05595;Name=LNP58_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05595;old_locus_tag=LNP58_05590 NZ_CP086372.1 Protein Homology CDS 1180538 1181641 . - 0 ID=cds-WP_011407590.1;Parent=gene-LNP58_RS05595;Dbxref=Genbank:WP_011407590.1;Name=WP_011407590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304765.1;locus_tag=LNP58_RS05595;product=PLP-dependent cysteine synthase family protein;protein_id=WP_011407590.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1181737 1182193 . + . ID=gene-LNP58_RS05600;Name=LNP58_RS05600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05600;old_locus_tag=LNP58_05595;pseudo=true NZ_CP086372.1 Protein Homology CDS 1181737 1182193 . + 0 ID=cds-LNP58_RS05600;Parent=gene-LNP58_RS05600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162684.1;locus_tag=LNP58_RS05600;product=CopL family metal-binding regulatory protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1182280 1184127 . + . ID=gene-LNP58_RS05605;Name=LNP58_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05605;old_locus_tag=LNP58_05600 NZ_CP086372.1 Protein Homology CDS 1182280 1184127 . + 0 ID=cds-WP_103057232.1;Parent=gene-LNP58_RS05605;Dbxref=Genbank:WP_103057232.1;Name=WP_103057232.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507;gbkey=CDS;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091111.1;locus_tag=LNP58_RS05605;product=copper resistance system multicopper oxidase;protein_id=WP_103057232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1184124 1185230 . + . ID=gene-LNP58_RS05610;Name=LNP58_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05610;old_locus_tag=LNP58_05605 NZ_CP086372.1 Protein Homology CDS 1184124 1185230 . + 0 ID=cds-WP_011257643.1;Parent=gene-LNP58_RS05610;Dbxref=Genbank:WP_011257643.1;Name=WP_011257643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167647.1;locus_tag=LNP58_RS05610;product=copper resistance protein B;protein_id=WP_011257643.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1185387 1185911 . + . ID=gene-LNP58_RS05615;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LNP58_RS05615;old_locus_tag=LNP58_05610 NZ_CP086372.1 Protein Homology CDS 1185387 1185911 . + 0 ID=cds-WP_011407588.1;Parent=gene-LNP58_RS05615;Dbxref=Genbank:WP_011407588.1;Name=WP_011407588.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849953.1;locus_tag=LNP58_RS05615;product=lactoylglutathione lyase;protein_id=WP_011407588.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1185962 1186038 . - . ID=gene-LNP58_RS05620;Name=LNP58_RS05620;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05620;old_locus_tag=LNP58_05615 NZ_CP086372.1 cmsearch ncRNA 1185962 1186038 . - . ID=rna-LNP58_RS05620;Parent=gene-LNP58_RS05620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05620;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1185962 1186038 . - . ID=exon-LNP58_RS05620-1;Parent=rna-LNP58_RS05620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05620;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1186128 1187162 . - . ID=gene-LNP58_RS05625;Name=LNP58_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05625;old_locus_tag=LNP58_05620 NZ_CP086372.1 Protein Homology CDS 1186128 1187162 . - 0 ID=cds-WP_011407587.1;Parent=gene-LNP58_RS05625;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=LNP58_RS05625;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1187278 1188041 . - . ID=gene-LNP58_RS05630;Name=LNP58_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05630;old_locus_tag=LNP58_05625 NZ_CP086372.1 Protein Homology CDS 1187726 1188041 . - 0 ID=cds-WP_094187804.1;Parent=gene-LNP58_RS05630;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS05630;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1187278 1187726 . - 2 ID=cds-WP_094187804.1;Parent=gene-LNP58_RS05630;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS05630;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1188098 1188649 . - . ID=gene-LNP58_RS05635;Name=LNP58_RS05635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05635;old_locus_tag=LNP58_05630;partial=true;pseudo=true;start_range=.,1188098 NZ_CP086372.1 Protein Homology CDS 1188098 1188649 . - 0 ID=cds-LNP58_RS05635;Parent=gene-LNP58_RS05635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173703.1;locus_tag=LNP58_RS05635;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1188098;transl_table=11 NZ_CP086372.1 RefSeq gene 1188881 1189354 . - . ID=gene-LNP58_RS05640;Name=LNP58_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05640;old_locus_tag=LNP58_05635 NZ_CP086372.1 Protein Homology CDS 1188881 1189354 . - 0 ID=cds-WP_011257638.1;Parent=gene-LNP58_RS05640;Dbxref=Genbank:WP_011257638.1;Name=WP_011257638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506523.1;locus_tag=LNP58_RS05640;product=hypothetical protein;protein_id=WP_011257638.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1189736 1191565 . - . ID=gene-LNP58_RS05645;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LNP58_RS05645;old_locus_tag=LNP58_05640 NZ_CP086372.1 Protein Homology CDS 1189736 1191565 . - 0 ID=cds-WP_011407585.1;Parent=gene-LNP58_RS05645;Dbxref=Genbank:WP_011407585.1;Name=WP_011407585.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159863.1;locus_tag=LNP58_RS05645;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_011407585.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1191773 1193044 . + . ID=gene-LNP58_RS05650;Name=LNP58_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05650;old_locus_tag=LNP58_05645 NZ_CP086372.1 Protein Homology CDS 1191773 1193044 . + 0 ID=cds-WP_069960068.1;Parent=gene-LNP58_RS05650;Dbxref=Genbank:WP_069960068.1;Name=WP_069960068.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157227.1;locus_tag=LNP58_RS05650;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_069960068.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1193093 1193242 . + . ID=gene-LNP58_RS05655;Name=LNP58_RS05655;end_range=1193242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05655;old_locus_tag=LNP58_05650;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1193093 1193242 . + 0 ID=cds-LNP58_RS05655;Parent=gene-LNP58_RS05655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=1193242,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157226.1;locus_tag=LNP58_RS05655;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1193250 1194466 . - . ID=gene-LNP58_RS05660;Name=LNP58_RS05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05660;old_locus_tag=LNP58_05655;pseudo=true NZ_CP086372.1 Protein Homology CDS 1193250 1194466 . - 0 ID=cds-LNP58_RS05660;Parent=gene-LNP58_RS05660;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS05660;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1194780 1195369 . - . ID=gene-LNP58_RS05665;Name=LNP58_RS05665;end_range=1195369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05665;old_locus_tag=LNP58_05660;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1194780 1195369 . - 0 ID=cds-LNP58_RS05665;Parent=gene-LNP58_RS05665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1195369,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS05665;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1195453 1196418 . + . ID=gene-LNP58_RS05670;Name=LNP58_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05670;old_locus_tag=LNP58_05665 NZ_CP086372.1 Protein Homology CDS 1195453 1196418 . + 0 ID=cds-WP_109182076.1;Parent=gene-LNP58_RS05670;Dbxref=Genbank:WP_109182076.1;Name=WP_109182076.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS05670;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182076.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1196436 1196609 . - . ID=gene-LNP58_RS05675;Name=LNP58_RS05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05675;old_locus_tag=LNP58_05670;partial=true;pseudo=true;start_range=.,1196436 NZ_CP086372.1 Protein Homology CDS 1196436 1196609 . - 0 ID=cds-LNP58_RS05675;Parent=gene-LNP58_RS05675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS05675;partial=true;product=transposase;pseudo=true;start_range=.,1196436;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1196658 1196816 . + . ID=gene-LNP58_RS05680;Name=LNP58_RS05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05680;old_locus_tag=LNP58_05675;partial=true;pseudo=true;start_range=.,1196658 NZ_CP086372.1 Protein Homology CDS 1196658 1196816 . + 0 ID=cds-LNP58_RS05680;Parent=gene-LNP58_RS05680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926625.1;locus_tag=LNP58_RS05680;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,1196658;transl_table=11 NZ_CP086372.1 RefSeq gene 1197144 1198508 . - . ID=gene-LNP58_RS05685;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LNP58_RS05685;old_locus_tag=LNP58_05680 NZ_CP086372.1 Protein Homology CDS 1197144 1198508 . - 0 ID=cds-WP_027703258.1;Parent=gene-LNP58_RS05685;Dbxref=Genbank:WP_027703258.1;Name=WP_027703258.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407581.1;locus_tag=LNP58_RS05685;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_027703258.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1198653 1199036 . + . ID=gene-LNP58_RS05690;Name=LNP58_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05690;old_locus_tag=LNP58_05685 NZ_CP086372.1 Protein Homology CDS 1198653 1199036 . + 0 ID=cds-WP_011257628.1;Parent=gene-LNP58_RS05690;Dbxref=Genbank:WP_011257628.1;Name=WP_011257628.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484015.1;locus_tag=LNP58_RS05690;product=GtrA family protein;protein_id=WP_011257628.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1199559 1200131 . - . ID=gene-LNP58_RS05695;Name=LNP58_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05695;old_locus_tag=LNP58_05690 NZ_CP086372.1 Protein Homology CDS 1199559 1200131 . - 0 ID=cds-WP_011257627.1;Parent=gene-LNP58_RS05695;Dbxref=Genbank:WP_011257627.1;Name=WP_011257627.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371987.1;locus_tag=LNP58_RS05695;product=chorismate mutase;protein_id=WP_011257627.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1200363 1200785 . - . ID=gene-LNP58_RS05700;Name=LNP58_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05700;old_locus_tag=LNP58_05695 NZ_CP086372.1 Protein Homology CDS 1200363 1200785 . - 0 ID=cds-WP_011257626.1;Parent=gene-LNP58_RS05700;Dbxref=Genbank:WP_011257626.1;Name=WP_011257626.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407577.1;locus_tag=LNP58_RS05700;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_011257626.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1200929 1202335 . - . ID=gene-LNP58_RS05705;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LNP58_RS05705;old_locus_tag=LNP58_05700 NZ_CP086372.1 Protein Homology CDS 1200929 1202335 . - 0 ID=cds-WP_011257625.1;Parent=gene-LNP58_RS05705;Dbxref=Genbank:WP_011257625.1;Name=WP_011257625.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504697.1;locus_tag=LNP58_RS05705;product=F0F1 ATP synthase subunit beta;protein_id=WP_011257625.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1202480 1203343 . - . ID=gene-LNP58_RS05710;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LNP58_RS05710;old_locus_tag=LNP58_05705 NZ_CP086372.1 Protein Homology CDS 1202480 1203343 . - 0 ID=cds-WP_011257624.1;Parent=gene-LNP58_RS05710;Dbxref=Genbank:WP_011257624.1;Name=WP_011257624.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=LNP58_RS05710;product=F0F1 ATP synthase subunit gamma;protein_id=WP_011257624.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1203537 1205084 . - . ID=gene-LNP58_RS05715;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LNP58_RS05715;old_locus_tag=LNP58_05710 NZ_CP086372.1 Protein Homology CDS 1203537 1205084 . - 0 ID=cds-WP_011257623.1;Parent=gene-LNP58_RS05715;Dbxref=Genbank:WP_011257623.1;Name=WP_011257623.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=LNP58_RS05715;product=F0F1 ATP synthase subunit alpha;protein_id=WP_011257623.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1205132 1205659 . - . ID=gene-LNP58_RS05720;Name=LNP58_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05720;old_locus_tag=LNP58_05715 NZ_CP086372.1 Protein Homology CDS 1205132 1205659 . - 0 ID=cds-WP_011257622.1;Parent=gene-LNP58_RS05720;Dbxref=Genbank:WP_011257622.1;Name=WP_011257622.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304550.1;locus_tag=LNP58_RS05720;product=F0F1 ATP synthase subunit delta;protein_id=WP_011257622.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1205663 1206133 . - . ID=gene-LNP58_RS05725;Name=LNP58_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05725;old_locus_tag=LNP58_05720 NZ_CP086372.1 Protein Homology CDS 1205663 1206133 . - 0 ID=cds-WP_011257621.1;Parent=gene-LNP58_RS05725;Dbxref=Genbank:WP_011257621.1;Name=WP_011257621.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901014.1;locus_tag=LNP58_RS05725;product=F0F1 ATP synthase subunit B;protein_id=WP_011257621.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1206248 1206550 . - . ID=gene-LNP58_RS05730;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LNP58_RS05730;old_locus_tag=LNP58_05725 NZ_CP086372.1 Protein Homology CDS 1206248 1206550 . - 0 ID=cds-WP_011257620.1;Parent=gene-LNP58_RS05730;Dbxref=Genbank:WP_011257620.1;Name=WP_011257620.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814105.1;locus_tag=LNP58_RS05730;product=F0F1 ATP synthase subunit C;protein_id=WP_011257620.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1206623 1207423 . - . ID=gene-LNP58_RS05735;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LNP58_RS05735;old_locus_tag=LNP58_05730 NZ_CP086372.1 Protein Homology CDS 1206623 1207423 . - 0 ID=cds-WP_011257619.1;Parent=gene-LNP58_RS05735;Dbxref=Genbank:WP_011257619.1;Name=WP_011257619.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814108.1;locus_tag=LNP58_RS05735;product=F0F1 ATP synthase subunit A;protein_id=WP_011257619.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1207449 1207814 . - . ID=gene-LNP58_RS05740;Name=LNP58_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05740;old_locus_tag=LNP58_05735 NZ_CP086372.1 Protein Homology CDS 1207449 1207814 . - 0 ID=cds-WP_011407576.1;Parent=gene-LNP58_RS05740;Dbxref=Genbank:WP_011407576.1;Name=WP_011407576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155241.1;locus_tag=LNP58_RS05740;product=hypothetical protein;protein_id=WP_011407576.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1208347 1209159 . + . ID=gene-LNP58_RS05745;Name=LNP58_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05745;old_locus_tag=LNP58_05740 NZ_CP086372.1 Protein Homology CDS 1208347 1209159 . + 0 ID=cds-WP_011257617.1;Parent=gene-LNP58_RS05745;Dbxref=Genbank:WP_011257617.1;Name=WP_011257617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171127.1;locus_tag=LNP58_RS05745;product=hypothetical protein;protein_id=WP_011257617.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1209298 1209588 . - . ID=gene-LNP58_RS05750;Name=LNP58_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05750;old_locus_tag=LNP58_05745 NZ_CP086372.1 Protein Homology CDS 1209298 1209588 . - 0 ID=cds-WP_011257616.1;Parent=gene-LNP58_RS05750;Dbxref=Genbank:WP_011257616.1;Name=WP_011257616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910286.1;locus_tag=LNP58_RS05750;product=hypothetical protein;protein_id=WP_011257616.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1209650 1211473 . - . ID=gene-LNP58_RS05755;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LNP58_RS05755;old_locus_tag=LNP58_05750 NZ_CP086372.1 Protein Homology CDS 1209650 1211473 . - 0 ID=cds-WP_011257615.1;Parent=gene-LNP58_RS05755;Dbxref=Genbank:WP_011257615.1;Name=WP_011257615.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114723.1;locus_tag=LNP58_RS05755;product=dihydrolipoyl dehydrogenase;protein_id=WP_011257615.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1211490 1212137 . - . ID=gene-LNP58_RS05760;Name=LNP58_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05760;old_locus_tag=LNP58_05755 NZ_CP086372.1 Protein Homology CDS 1211490 1212137 . - 0 ID=cds-WP_011257614.1;Parent=gene-LNP58_RS05760;Dbxref=Genbank:WP_011257614.1;Name=WP_011257614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237994.1;locus_tag=LNP58_RS05760;product=hypothetical protein;protein_id=WP_011257614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1212134 1213927 . - . ID=gene-LNP58_RS05765;Name=LNP58_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05765;old_locus_tag=LNP58_05760 NZ_CP086372.1 Protein Homology CDS 1212134 1213927 . - 0 ID=cds-WP_011257613.1;Parent=gene-LNP58_RS05765;Dbxref=Genbank:WP_011257613.1;Name=WP_011257613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974307.1;locus_tag=LNP58_RS05765;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_011257613.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1214057 1214815 . - . ID=gene-LNP58_RS05770;Name=LNP58_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05770;old_locus_tag=LNP58_05765 NZ_CP086372.1 Protein Homology CDS 1214057 1214815 . - 0 ID=cds-WP_011257612.1;Parent=gene-LNP58_RS05770;Dbxref=Genbank:WP_011257612.1;Name=WP_011257612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962078.1;locus_tag=LNP58_RS05770;product=DUF2884 family protein;protein_id=WP_011257612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1214997 1215557 . - . ID=gene-LNP58_RS05775;Name=LNP58_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05775;old_locus_tag=LNP58_05770 NZ_CP086372.1 Protein Homology CDS 1214997 1215557 . - 0 ID=cds-WP_011257611.1;Parent=gene-LNP58_RS05775;Dbxref=Genbank:WP_011257611.1;Name=WP_011257611.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472749.1;locus_tag=LNP58_RS05775;product=DNA-deoxyinosine glycosylase;protein_id=WP_011257611.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1215699 1216385 . + . ID=gene-LNP58_RS05780;Name=LNP58_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05780;old_locus_tag=LNP58_05775 NZ_CP086372.1 Protein Homology CDS 1215699 1216385 . + 0 ID=cds-WP_011257610.1;Parent=gene-LNP58_RS05780;Dbxref=Genbank:WP_011257610.1;Name=WP_011257610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974312.1;locus_tag=LNP58_RS05780;product=outer membrane beta-barrel protein;protein_id=WP_011257610.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1216670 1217227 . - . ID=gene-LNP58_RS05785;Name=LNP58_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05785;old_locus_tag=LNP58_05780 NZ_CP086372.1 Protein Homology CDS 1216670 1217227 . - 0 ID=cds-WP_011257609.1;Parent=gene-LNP58_RS05785;Dbxref=Genbank:WP_011257609.1;Name=WP_011257609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450413.1;locus_tag=LNP58_RS05785;product=DUF1453 family protein;protein_id=WP_011257609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1217604 1218404 . - . ID=gene-LNP58_RS05790;Name=LNP58_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05790;old_locus_tag=LNP58_05785 NZ_CP086372.1 Protein Homology CDS 1217604 1218404 . - 0 ID=cds-WP_011407574.1;Parent=gene-LNP58_RS05790;Dbxref=Genbank:WP_011407574.1;Name=WP_011407574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157466.1;locus_tag=LNP58_RS05790;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011407574.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1218499 1219194 . - . ID=gene-LNP58_RS05795;Name=LNP58_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05795;old_locus_tag=LNP58_05790 NZ_CP086372.1 Protein Homology CDS 1218499 1219194 . - 0 ID=cds-WP_011257607.1;Parent=gene-LNP58_RS05795;Dbxref=Genbank:WP_011257607.1;Name=WP_011257607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489185.1;locus_tag=LNP58_RS05795;product=ABC transporter permease;protein_id=WP_011257607.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1219191 1220198 . - . ID=gene-LNP58_RS05800;Name=LNP58_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05800;old_locus_tag=LNP58_05795 NZ_CP086372.1 Protein Homology CDS 1219191 1220198 . - 0 ID=cds-WP_011407573.1;Parent=gene-LNP58_RS05800;Dbxref=Genbank:WP_011407573.1;Name=WP_011407573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038713.1;locus_tag=LNP58_RS05800;product=methionine ABC transporter ATP-binding protein;protein_id=WP_011407573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1220317 1221213 . - . ID=gene-LNP58_RS05805;Name=LNP58_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05805;old_locus_tag=LNP58_05800 NZ_CP086372.1 Protein Homology CDS 1220317 1221213 . - 0 ID=cds-WP_011407572.1;Parent=gene-LNP58_RS05805;Dbxref=Genbank:WP_011407572.1;Name=WP_011407572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348672.1;locus_tag=LNP58_RS05805;product=DMT family transporter;protein_id=WP_011407572.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1221321 1221806 . + . ID=gene-LNP58_RS05810;Name=LNP58_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05810;old_locus_tag=LNP58_05805 NZ_CP086372.1 Protein Homology CDS 1221321 1221806 . + 0 ID=cds-WP_011257604.1;Parent=gene-LNP58_RS05810;Dbxref=Genbank:WP_011257604.1;Name=WP_011257604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300350.1;locus_tag=LNP58_RS05810;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_011257604.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1221952 1222410 . + . ID=gene-LNP58_RS05815;Name=LNP58_RS05815;end_range=1222410,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05815;old_locus_tag=LNP58_05810;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1221952 1222410 . + 0 ID=cds-LNP58_RS05815;Parent=gene-LNP58_RS05815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1222410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171646.1;locus_tag=LNP58_RS05815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1222406 1223543 . + . ID=gene-LNP58_RS05820;Name=LNP58_RS05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05820;old_locus_tag=LNP58_05815;pseudo=true NZ_CP086372.1 Protein Homology CDS 1222406 1223543 . + 0 ID=cds-LNP58_RS05820;Parent=gene-LNP58_RS05820;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926812.1;locus_tag=LNP58_RS05820;product=response regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1223530 1224393 . + . ID=gene-LNP58_RS05825;Name=LNP58_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05825;old_locus_tag=LNP58_05820 NZ_CP086372.1 Protein Homology CDS 1223530 1224393 . + 0 ID=cds-WP_069963822.1;Parent=gene-LNP58_RS05825;Dbxref=Genbank:WP_069963822.1;Name=WP_069963822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372078.1;locus_tag=LNP58_RS05825;product=lysophospholipase;protein_id=WP_069963822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1224552 1225112 . + . ID=gene-LNP58_RS05830;Name=LNP58_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05830;old_locus_tag=LNP58_05825 NZ_CP086372.1 Protein Homology CDS 1224552 1225112 . + 0 ID=cds-WP_011407569.1;Parent=gene-LNP58_RS05830;Dbxref=Genbank:WP_011407569.1;Name=WP_011407569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157459.1;locus_tag=LNP58_RS05830;product=DUF1415 domain-containing protein;protein_id=WP_011407569.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1225534 1226340 . + . ID=gene-LNP58_RS05835;Name=LNP58_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05835;old_locus_tag=LNP58_05830 NZ_CP086372.1 Protein Homology CDS 1225534 1226340 . + 0 ID=cds-WP_011407568.1;Parent=gene-LNP58_RS05835;Dbxref=Genbank:WP_011407568.1;Name=WP_011407568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116655.1;locus_tag=LNP58_RS05835;product=SDR family oxidoreductase;protein_id=WP_011407568.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1226476 1227154 . - . ID=gene-LNP58_RS05840;Name=LNP58_RS05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS05840;old_locus_tag=LNP58_05835;pseudo=true NZ_CP086372.1 Protein Homology CDS 1226476 1227154 . - 0 ID=cds-LNP58_RS05840;Parent=gene-LNP58_RS05840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304342.1;locus_tag=LNP58_RS05840;product=HAD family phosphatase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1227151 1227864 . - . ID=gene-LNP58_RS05845;Name=LNP58_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05845;old_locus_tag=LNP58_05840 NZ_CP086372.1 Protein Homology CDS 1227151 1227864 . - 0 ID=cds-WP_069959721.1;Parent=gene-LNP58_RS05845;Dbxref=Genbank:WP_069959721.1;Name=WP_069959721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171645.1;locus_tag=LNP58_RS05845;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_069959721.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1227861 1228928 . - . ID=gene-LNP58_RS05850;Name=LNP58_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05850;old_locus_tag=LNP58_05845 NZ_CP086372.1 Protein Homology CDS 1227861 1228928 . - 0 ID=cds-WP_011407565.1;Parent=gene-LNP58_RS05850;Dbxref=Genbank:WP_011407565.1;Name=WP_011407565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300358.1;locus_tag=LNP58_RS05850;product=class I SAM-dependent methyltransferase;protein_id=WP_011407565.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1229119 1229364 . + . ID=gene-LNP58_RS05855;Name=LNP58_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05855;old_locus_tag=LNP58_05850 NZ_CP086372.1 Protein Homology CDS 1229119 1229364 . + 0 ID=cds-WP_024710498.1;Parent=gene-LNP58_RS05855;Dbxref=Genbank:WP_024710498.1;Name=WP_024710498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446155.1;locus_tag=LNP58_RS05855;product=hypothetical protein;protein_id=WP_024710498.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1229837 1229913 . + . ID=gene-LNP58_RS05860;Name=LNP58_RS05860;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05860;old_locus_tag=LNP58_05855 NZ_CP086372.1 cmsearch ncRNA 1229837 1229913 . + . ID=rna-LNP58_RS05860;Parent=gene-LNP58_RS05860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05860;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1229837 1229913 . + . ID=exon-LNP58_RS05860-1;Parent=rna-LNP58_RS05860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05860;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1229918 1231255 . - . ID=gene-LNP58_RS05865;Name=LNP58_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05865;old_locus_tag=LNP58_05860 NZ_CP086372.1 Protein Homology CDS 1229918 1231255 . - 0 ID=cds-WP_011407562.1;Parent=gene-LNP58_RS05865;Dbxref=Genbank:WP_011407562.1;Name=WP_011407562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922022.1;locus_tag=LNP58_RS05865;product=sorbosone dehydrogenase family protein;protein_id=WP_011407562.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1231344 1231652 . - . ID=gene-LNP58_RS05870;Name=LNP58_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05870;old_locus_tag=LNP58_05865 NZ_CP086372.1 Protein Homology CDS 1231344 1231652 . - 0 ID=cds-WP_011407561.1;Parent=gene-LNP58_RS05870;Dbxref=Genbank:WP_011407561.1;Name=WP_011407561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911254.1;locus_tag=LNP58_RS05870;product=DUF3247 family protein;protein_id=WP_011407561.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1231782 1231856 . - . ID=gene-LNP58_RS05875;Name=LNP58_RS05875;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05875;old_locus_tag=LNP58_05870 NZ_CP086372.1 cmsearch ncRNA 1231782 1231856 . - . ID=rna-LNP58_RS05875;Parent=gene-LNP58_RS05875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05875;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1231782 1231856 . - . ID=exon-LNP58_RS05875-1;Parent=rna-LNP58_RS05875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05875;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1232137 1234173 . - . ID=gene-LNP58_RS05880;Name=LNP58_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05880;old_locus_tag=LNP58_05875 NZ_CP086372.1 Protein Homology CDS 1232137 1234173 . - 0 ID=cds-WP_042464467.1;Parent=gene-LNP58_RS05880;Dbxref=Genbank:WP_042464467.1;Name=WP_042464467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=LNP58_RS05880;product=PAS domain-containing sensor histidine kinase;protein_id=WP_042464467.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1234260 1234568 . - . ID=gene-LNP58_RS05885;Name=LNP58_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05885;old_locus_tag=LNP58_05880 NZ_CP086372.1 Protein Homology CDS 1234260 1234568 . - 0 ID=cds-WP_011407559.1;Parent=gene-LNP58_RS05885;Dbxref=Genbank:WP_011407559.1;Name=WP_011407559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407559.1;locus_tag=LNP58_RS05885;product=hypothetical protein;protein_id=WP_011407559.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1234555 1235001 . - . ID=gene-LNP58_RS05890;Name=LNP58_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05890;old_locus_tag=LNP58_05885 NZ_CP086372.1 Protein Homology CDS 1234555 1235001 . - 0 ID=cds-WP_042465447.1;Parent=gene-LNP58_RS05890;Dbxref=Genbank:WP_042465447.1;Name=WP_042465447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372107.1;locus_tag=LNP58_RS05890;product=hypothetical protein;protein_id=WP_042465447.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1235250 1235831 . + . ID=gene-LNP58_RS05895;Name=LNP58_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05895;old_locus_tag=LNP58_05890 NZ_CP086372.1 Protein Homology CDS 1235250 1235831 . + 0 ID=cds-WP_011407557.1;Parent=gene-LNP58_RS05895;Dbxref=Genbank:WP_011407557.1;Name=WP_011407557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992142.1;locus_tag=LNP58_RS05895;product=DUF3016 domain-containing protein;protein_id=WP_011407557.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1236234 1237334 . - . ID=gene-LNP58_RS05900;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LNP58_RS05900;old_locus_tag=LNP58_05895 NZ_CP086372.1 Protein Homology CDS 1236234 1237334 . - 0 ID=cds-WP_069959720.1;Parent=gene-LNP58_RS05900;Dbxref=Genbank:WP_069959720.1;Name=WP_069959720.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504732.1;locus_tag=LNP58_RS05900;product=alanine racemase;protein_id=WP_069959720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1237334 1238623 . - . ID=gene-LNP58_RS05905;Name=LNP58_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05905;old_locus_tag=LNP58_05900 NZ_CP086372.1 Protein Homology CDS 1237334 1238623 . - 0 ID=cds-WP_069959719.1;Parent=gene-LNP58_RS05905;Dbxref=Genbank:WP_069959719.1;Name=WP_069959719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963042.1;locus_tag=LNP58_RS05905;product=D-amino acid dehydrogenase;protein_id=WP_069959719.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1238772 1239251 . + . ID=gene-LNP58_RS05910;Name=LNP58_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05910;old_locus_tag=LNP58_05905 NZ_CP086372.1 Protein Homology CDS 1238772 1239251 . + 0 ID=cds-WP_011257588.1;Parent=gene-LNP58_RS05910;Dbxref=Genbank:WP_011257588.1;Name=WP_011257588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166392.1;locus_tag=LNP58_RS05910;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_011257588.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1239303 1239728 . - . ID=gene-LNP58_RS05915;Name=LNP58_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05915;old_locus_tag=LNP58_05910 NZ_CP086372.1 Protein Homology CDS 1239303 1239728 . - 0 ID=cds-WP_044757538.1;Parent=gene-LNP58_RS05915;Dbxref=Genbank:WP_044757538.1;Name=WP_044757538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157446.1;locus_tag=LNP58_RS05915;product=hypothetical protein;protein_id=WP_044757538.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1240009 1240473 . + . ID=gene-LNP58_RS05920;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LNP58_RS05920;old_locus_tag=LNP58_05915 NZ_CP086372.1 Protein Homology CDS 1240009 1240473 . + 0 ID=cds-WP_011257586.1;Parent=gene-LNP58_RS05920;Dbxref=Genbank:WP_011257586.1;Name=WP_011257586.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489131.1;locus_tag=LNP58_RS05920;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011257586.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1240779 1241270 . + . ID=gene-LNP58_RS05925;Name=LNP58_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05925;old_locus_tag=LNP58_05920 NZ_CP086372.1 Protein Homology CDS 1240779 1241270 . + 0 ID=cds-WP_075242181.1;Parent=gene-LNP58_RS05925;Dbxref=Genbank:WP_075242181.1;Name=WP_075242181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157444.1;locus_tag=LNP58_RS05925;product=MliC family protein;protein_id=WP_075242181.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1241368 1242222 . + . ID=gene-LNP58_RS05930;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LNP58_RS05930;old_locus_tag=LNP58_05925 NZ_CP086372.1 Protein Homology CDS 1241368 1242222 . + 0 ID=cds-WP_008573335.1;Parent=gene-LNP58_RS05930;Dbxref=Genbank:WP_008573335.1;Name=WP_008573335.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303316.1;locus_tag=LNP58_RS05930;product=flagellar motor stator protein MotA;protein_id=WP_008573335.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1242233 1243366 . + . ID=gene-LNP58_RS05935;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LNP58_RS05935;old_locus_tag=LNP58_05930 NZ_CP086372.1 Protein Homology CDS 1242233 1243366 . + 0 ID=cds-WP_011257584.1;Parent=gene-LNP58_RS05935;Dbxref=Genbank:WP_011257584.1;Name=WP_011257584.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911263.1;locus_tag=LNP58_RS05935;product=flagellar motor protein MotB;protein_id=WP_011257584.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1243484 1243561 . - . ID=gene-LNP58_RS05940;Name=LNP58_RS05940;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS05940;old_locus_tag=LNP58_05935 NZ_CP086372.1 cmsearch ncRNA 1243484 1243561 . - . ID=rna-LNP58_RS05940;Parent=gene-LNP58_RS05940;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05940;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1243484 1243561 . - . ID=exon-LNP58_RS05940-1;Parent=rna-LNP58_RS05940;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS05940;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1243753 1244319 . + . ID=gene-LNP58_RS05945;Name=LNP58_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05945;old_locus_tag=LNP58_05940 NZ_CP086372.1 Protein Homology CDS 1243753 1244319 . + 0 ID=cds-WP_011257583.1;Parent=gene-LNP58_RS05945;Dbxref=Genbank:WP_011257583.1;Name=WP_011257583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257583.1;locus_tag=LNP58_RS05945;product=hypothetical protein;protein_id=WP_011257583.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1244328 1244612 . + . ID=gene-LNP58_RS05950;Name=LNP58_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05950;old_locus_tag=LNP58_05945 NZ_CP086372.1 Protein Homology CDS 1244328 1244612 . + 0 ID=cds-WP_011257582.1;Parent=gene-LNP58_RS05950;Dbxref=Genbank:WP_011257582.1;Name=WP_011257582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504739.1;locus_tag=LNP58_RS05950;product=DUF4031 domain-containing protein;protein_id=WP_011257582.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1244788 1245516 . + . ID=gene-LNP58_RS05955;Name=LNP58_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05955;old_locus_tag=LNP58_05950 NZ_CP086372.1 Protein Homology CDS 1244788 1245516 . + 0 ID=cds-WP_011257581.1;Parent=gene-LNP58_RS05955;Dbxref=Genbank:WP_011257581.1;Name=WP_011257581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302989.1;locus_tag=LNP58_RS05955;product=response regulator transcription factor;protein_id=WP_011257581.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1245498 1247195 . - . ID=gene-LNP58_RS05960;Name=LNP58_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05960;old_locus_tag=LNP58_05955 NZ_CP086372.1 Protein Homology CDS 1245498 1247195 . - 0 ID=cds-WP_228329680.1;Parent=gene-LNP58_RS05960;Dbxref=Genbank:WP_228329680.1;Name=WP_228329680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407553.1;locus_tag=LNP58_RS05960;product=ATP-binding protein;protein_id=WP_228329680.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1247077 1250046 . + . ID=gene-LNP58_RS05965;Name=LNP58_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05965;old_locus_tag=LNP58_05960 NZ_CP086372.1 Protein Homology CDS 1247077 1250046 . + 0 ID=cds-WP_044757121.1;Parent=gene-LNP58_RS05965;Dbxref=Genbank:WP_044757121.1;Name=WP_044757121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113609.1;locus_tag=LNP58_RS05965;product=YadA-like family protein;protein_id=WP_044757121.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1250093 1252000 . + . ID=gene-LNP58_RS05970;Name=LNP58_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05970;old_locus_tag=LNP58_05965 NZ_CP086372.1 Protein Homology CDS 1250093 1252000 . + 0 ID=cds-WP_011257578.1;Parent=gene-LNP58_RS05970;Dbxref=Genbank:WP_011257578.1;Name=WP_011257578.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114556.1;locus_tag=LNP58_RS05970;product=S8 family peptidase;protein_id=WP_011257578.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1252129 1252665 . - . ID=gene-LNP58_RS05975;Name=LNP58_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05975;old_locus_tag=LNP58_05970 NZ_CP086372.1 Protein Homology CDS 1252129 1252665 . - 0 ID=cds-WP_011407550.1;Parent=gene-LNP58_RS05975;Dbxref=Genbank:WP_011407550.1;Name=WP_011407550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379770.1;locus_tag=LNP58_RS05975;product=hypothetical protein;protein_id=WP_011407550.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1252831 1253097 . + . ID=gene-LNP58_RS05980;Name=LNP58_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05980;old_locus_tag=LNP58_05975 NZ_CP086372.1 Protein Homology CDS 1252831 1253097 . + 0 ID=cds-WP_011407549.1;Parent=gene-LNP58_RS05980;Dbxref=Genbank:WP_011407549.1;Name=WP_011407549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038741.1;locus_tag=LNP58_RS05980;product=DUF3297 family protein;protein_id=WP_011407549.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1253240 1253398 . - . ID=gene-LNP58_RS05985;Name=LNP58_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05985;old_locus_tag=LNP58_05980 NZ_CP086372.1 GeneMarkS-2+ CDS 1253240 1253398 . - 0 ID=cds-WP_153296752.1;Parent=gene-LNP58_RS05985;Dbxref=Genbank:WP_153296752.1;Name=WP_153296752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS05985;product=hypothetical protein;protein_id=WP_153296752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1253511 1254272 . - . ID=gene-LNP58_RS05990;Name=LNP58_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05990;old_locus_tag=LNP58_05985 NZ_CP086372.1 Protein Homology CDS 1253511 1254272 . - 0 ID=cds-WP_027703259.1;Parent=gene-LNP58_RS05990;Dbxref=Genbank:WP_027703259.1;Name=WP_027703259.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157438.1;locus_tag=LNP58_RS05990;product=ABC transporter permease;protein_id=WP_027703259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1254269 1255213 . - . ID=gene-LNP58_RS05995;Name=LNP58_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS05995;old_locus_tag=LNP58_05990 NZ_CP086372.1 Protein Homology CDS 1254269 1255213 . - 0 ID=cds-WP_011407547.1;Parent=gene-LNP58_RS05995;Dbxref=Genbank:WP_011407547.1;Name=WP_011407547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448573.1;locus_tag=LNP58_RS05995;product=ABC transporter ATP-binding protein;protein_id=WP_011407547.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1255460 1257097 . - . ID=gene-LNP58_RS06000;Name=LNP58_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06000;old_locus_tag=LNP58_05995 NZ_CP086372.1 Protein Homology CDS 1255460 1257097 . - 0 ID=cds-WP_011257573.1;Parent=gene-LNP58_RS06000;Dbxref=Genbank:WP_011257573.1;Name=WP_011257573.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504747.1;locus_tag=LNP58_RS06000;product=Na+/H+ antiporter;protein_id=WP_011257573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1257572 1258207 . - . ID=gene-LNP58_RS06005;Name=LNP58_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06005;old_locus_tag=LNP58_06000 NZ_CP086372.1 GeneMarkS-2+ CDS 1257572 1258207 . - 0 ID=cds-WP_228329679.1;Parent=gene-LNP58_RS06005;Dbxref=Genbank:WP_228329679.1;Name=WP_228329679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS06005;product=hypothetical protein;protein_id=WP_228329679.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1258605 1259162 . + . ID=gene-LNP58_RS06010;Name=LNP58_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06010;old_locus_tag=LNP58_06005 NZ_CP086372.1 Protein Homology CDS 1258605 1259162 . + 0 ID=cds-WP_011407544.1;Parent=gene-LNP58_RS06010;Dbxref=Genbank:WP_011407544.1;Name=WP_011407544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489588.1;locus_tag=LNP58_RS06010;product=fasciclin domain-containing protein;protein_id=WP_011407544.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1259494 1259570 . - . ID=gene-LNP58_RS06015;Name=LNP58_RS06015;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06015;old_locus_tag=LNP58_06010 NZ_CP086372.1 cmsearch ncRNA 1259494 1259570 . - . ID=rna-LNP58_RS06015;Parent=gene-LNP58_RS06015;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06015;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1259494 1259570 . - . ID=exon-LNP58_RS06015-1;Parent=rna-LNP58_RS06015;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06015;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1259802 1261250 . - . ID=gene-LNP58_RS06020;Name=LNP58_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06020;old_locus_tag=LNP58_06015 NZ_CP086372.1 Protein Homology CDS 1259802 1261250 . - 0 ID=cds-WP_044757123.1;Parent=gene-LNP58_RS06020;Dbxref=Genbank:WP_044757123.1;Name=WP_044757123.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365450.1;locus_tag=LNP58_RS06020;product=UdgX family uracil-DNA binding protein;protein_id=WP_044757123.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1261257 1262501 . - . ID=gene-LNP58_RS06025;Name=LNP58_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06025;old_locus_tag=LNP58_06020 NZ_CP086372.1 Protein Homology CDS 1261257 1262501 . - 0 ID=cds-WP_048483685.1;Parent=gene-LNP58_RS06025;Dbxref=Genbank:WP_048483685.1;Name=WP_048483685.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167194.1;locus_tag=LNP58_RS06025;product=putative DNA modification/repair radical SAM protein;protein_id=WP_048483685.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1262699 1263517 . - . ID=gene-LNP58_RS06030;Name=LNP58_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06030;old_locus_tag=LNP58_06025 NZ_CP086372.1 Protein Homology CDS 1262699 1263517 . - 0 ID=cds-WP_011407542.1;Parent=gene-LNP58_RS06030;Dbxref=Genbank:WP_011407542.1;Name=WP_011407542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489595.1;locus_tag=LNP58_RS06030;product=class III extradiol ring-cleavage dioxygenase;protein_id=WP_011407542.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1263618 1263893 . - . ID=gene-LNP58_RS06035;Name=LNP58_RS06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06035;old_locus_tag=LNP58_06030;partial=true;pseudo=true;start_range=.,1263618 NZ_CP086372.1 Protein Homology CDS 1263618 1263893 . - 0 ID=cds-LNP58_RS06035;Parent=gene-LNP58_RS06035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301238.1;locus_tag=LNP58_RS06035;partial=true;product=DoxX family membrane protein;pseudo=true;start_range=.,1263618;transl_table=11 NZ_CP086372.1 RefSeq gene 1264009 1264578 . + . ID=gene-LNP58_RS06040;Name=LNP58_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06040;old_locus_tag=LNP58_06035 NZ_CP086372.1 Protein Homology CDS 1264009 1264578 . + 0 ID=cds-WP_011257563.1;Parent=gene-LNP58_RS06040;Dbxref=Genbank:WP_011257563.1;Name=WP_011257563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009588901.1;locus_tag=LNP58_RS06040;product=flavodoxin family protein;protein_id=WP_011257563.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1264718 1265713 . + . ID=gene-LNP58_RS06045;Name=LNP58_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06045;old_locus_tag=LNP58_06040 NZ_CP086372.1 Protein Homology CDS 1264718 1265713 . + 0 ID=cds-WP_011407539.1;Parent=gene-LNP58_RS06045;Dbxref=Genbank:WP_011407539.1;Name=WP_011407539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972965.1;locus_tag=LNP58_RS06045;product=aldo/keto reductase;protein_id=WP_011407539.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1265737 1265925 . - . ID=gene-LNP58_RS06050;Name=LNP58_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06050;old_locus_tag=LNP58_06045 NZ_CP086372.1 Protein Homology CDS 1265737 1265925 . - 0 ID=cds-WP_033013160.1;Parent=gene-LNP58_RS06050;Dbxref=Genbank:WP_033013160.1;Name=WP_033013160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504758.1;locus_tag=LNP58_RS06050;product=hypothetical protein;protein_id=WP_033013160.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1265954 1266649 . + . ID=gene-LNP58_RS06055;Name=LNP58_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06055;old_locus_tag=LNP58_06050 NZ_CP086372.1 Protein Homology CDS 1265954 1266649 . + 0 ID=cds-WP_075242199.1;Parent=gene-LNP58_RS06055;Dbxref=Genbank:WP_075242199.1;Name=WP_075242199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573318.1;locus_tag=LNP58_RS06055;product=glycosyltransferase;protein_id=WP_075242199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1266800 1268869 . + . ID=gene-LNP58_RS06060;Name=LNP58_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06060;old_locus_tag=LNP58_06055 NZ_CP086372.1 Protein Homology CDS 1266800 1268869 . + 0 ID=cds-WP_069960290.1;Parent=gene-LNP58_RS06060;Dbxref=Genbank:WP_069960290.1;Name=WP_069960290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167581.1;locus_tag=LNP58_RS06060;product=M13 family metallopeptidase;protein_id=WP_069960290.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1269208 1270065 . - . ID=gene-LNP58_RS06065;Name=LNP58_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06065;old_locus_tag=LNP58_06060 NZ_CP086372.1 Protein Homology CDS 1269208 1270065 . - 0 ID=cds-WP_011407537.1;Parent=gene-LNP58_RS06065;Dbxref=Genbank:WP_011407537.1;Name=WP_011407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407537.1;locus_tag=LNP58_RS06065;product=oxygenase MpaB family protein;protein_id=WP_011407537.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1270682 1271281 . + . ID=gene-LNP58_RS06070;Name=LNP58_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06070;old_locus_tag=LNP58_06065 NZ_CP086372.1 Protein Homology CDS 1270682 1271281 . + 0 ID=cds-WP_024744174.1;Parent=gene-LNP58_RS06070;Dbxref=Genbank:WP_024744174.1;Name=WP_024744174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118539.1;locus_tag=LNP58_RS06070;product=hypothetical protein;protein_id=WP_024744174.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1271399 1271475 . - . ID=gene-LNP58_RS06075;Name=LNP58_RS06075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06075;old_locus_tag=LNP58_06070 NZ_CP086372.1 cmsearch ncRNA 1271399 1271475 . - . ID=rna-LNP58_RS06075;Parent=gene-LNP58_RS06075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06075;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1271399 1271475 . - . ID=exon-LNP58_RS06075-1;Parent=rna-LNP58_RS06075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06075;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1271613 1273208 . - . ID=gene-LNP58_RS06080;Name=LNP58_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06080;old_locus_tag=LNP58_06075 NZ_CP086372.1 Protein Homology CDS 1271613 1273208 . - 0 ID=cds-WP_011407535.1;Parent=gene-LNP58_RS06080;Dbxref=Genbank:WP_011407535.1;Name=WP_011407535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803093.1;locus_tag=LNP58_RS06080;product=APC family permease;protein_id=WP_011407535.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1273372 1273733 . - . ID=gene-LNP58_RS06085;Name=LNP58_RS06085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06085;old_locus_tag=LNP58_06080;pseudo=true NZ_CP086372.1 Protein Homology CDS 1273372 1273733 . - 0 ID=cds-LNP58_RS06085;Parent=gene-LNP58_RS06085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157422.1;locus_tag=LNP58_RS06085;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1273907 1274691 . - . ID=gene-LNP58_RS06090;Name=LNP58_RS06090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06090;old_locus_tag=LNP58_06085;pseudo=true NZ_CP086372.1 Protein Homology CDS 1273907 1274691 . - 0 ID=cds-LNP58_RS06090;Parent=gene-LNP58_RS06090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038759.1;locus_tag=LNP58_RS06090;product=LytTR family DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1274688 1275983 . - . ID=gene-LNP58_RS06095;Name=LNP58_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06095;old_locus_tag=LNP58_06090 NZ_CP086372.1 Protein Homology CDS 1274688 1275983 . - 0 ID=cds-WP_178383142.1;Parent=gene-LNP58_RS06095;Dbxref=Genbank:WP_178383142.1;Name=WP_178383142.1;Ontology_term=GO:0000160,GO:0000155,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157420.1;locus_tag=LNP58_RS06095;product=histidine kinase;protein_id=WP_178383142.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1276294 1277508 . + . ID=gene-LNP58_RS06100;Name=LNP58_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06100;old_locus_tag=LNP58_06095 NZ_CP086372.1 Protein Homology CDS 1276294 1277508 . + 0 ID=cds-WP_024710469.1;Parent=gene-LNP58_RS06100;Dbxref=Genbank:WP_024710469.1;Name=WP_024710469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301250.1;locus_tag=LNP58_RS06100;product=FAD-dependent oxidoreductase;protein_id=WP_024710469.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1277817 1277951 . - . ID=gene-LNP58_RS23405;Name=LNP58_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23405 NZ_CP086372.1 GeneMarkS-2+ CDS 1277817 1277951 . - 0 ID=cds-WP_014504770.1;Parent=gene-LNP58_RS23405;Dbxref=Genbank:WP_014504770.1;Name=WP_014504770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23405;product=hypothetical protein;protein_id=WP_014504770.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1278211 1279587 . - . ID=gene-LNP58_RS06105;Name=LNP58_RS06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06105;old_locus_tag=LNP58_06100;partial=true;pseudo=true;start_range=.,1278211 NZ_CP086372.1 Protein Homology CDS 1278211 1279587 . - 0 ID=cds-LNP58_RS06105;Parent=gene-LNP58_RS06105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114624.1;locus_tag=LNP58_RS06105;partial=true;product=methyltransferase;pseudo=true;start_range=.,1278211;transl_table=11 NZ_CP086372.1 RefSeq gene 1279813 1280193 . + . ID=gene-LNP58_RS06110;Name=LNP58_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06110;old_locus_tag=LNP58_06105 NZ_CP086372.1 Protein Homology CDS 1279813 1280193 . + 0 ID=cds-WP_011257546.1;Parent=gene-LNP58_RS06110;Dbxref=Genbank:WP_011257546.1;Name=WP_011257546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157413.1;locus_tag=LNP58_RS06110;product=response regulator;protein_id=WP_011257546.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1280162 1280428 . - . ID=gene-LNP58_RS06115;Name=LNP58_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06115;old_locus_tag=LNP58_06110 NZ_CP086372.1 Protein Homology CDS 1280162 1280428 . - 0 ID=cds-WP_011257545.1;Parent=gene-LNP58_RS06115;Dbxref=Genbank:WP_011257545.1;Name=WP_011257545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257545.1;locus_tag=LNP58_RS06115;product=hypothetical protein;protein_id=WP_011257545.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1280428 1281708 . - . ID=gene-LNP58_RS06120;Name=LNP58_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06120;old_locus_tag=LNP58_06115 NZ_CP086372.1 Protein Homology CDS 1280428 1281708 . - 0 ID=cds-WP_011407527.1;Parent=gene-LNP58_RS06120;Dbxref=Genbank:WP_011407527.1;Name=WP_011407527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117241.1;locus_tag=LNP58_RS06120;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011407527.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1282242 1282522 . + . ID=gene-LNP58_RS06125;Name=LNP58_RS06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06125;old_locus_tag=LNP58_06120;pseudo=true NZ_CP086372.1 Protein Homology CDS 1282242 1282522 . + 0 ID=cds-LNP58_RS06125;Parent=gene-LNP58_RS06125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157410.1;locus_tag=LNP58_RS06125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1282825 1284234 . + . ID=gene-LNP58_RS06130;Name=LNP58_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06130;old_locus_tag=LNP58_06125 NZ_CP086372.1 Protein Homology CDS 1282825 1284234 . + 0 ID=cds-WP_011407526.1;Parent=gene-LNP58_RS06130;Dbxref=Genbank:WP_011407526.1;Name=WP_011407526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504776.1;locus_tag=LNP58_RS06130;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011407526.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1284225 1285241 . + . ID=gene-LNP58_RS06135;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LNP58_RS06135;old_locus_tag=LNP58_06130 NZ_CP086372.1 Protein Homology CDS 1284225 1285241 . + 0 ID=cds-WP_011407525.1;Parent=gene-LNP58_RS06135;Dbxref=Genbank:WP_011407525.1;Name=WP_011407525.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051953.1;locus_tag=LNP58_RS06135;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011407525.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1285326 1286124 . + . ID=gene-LNP58_RS06140;Name=LNP58_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06140;old_locus_tag=LNP58_06135 NZ_CP086372.1 Protein Homology CDS 1285326 1285597 . + 0 ID=cds-WP_094187728.1;Parent=gene-LNP58_RS06140;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS06140;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1285596 1286124 . + 1 ID=cds-WP_094187728.1;Parent=gene-LNP58_RS06140;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS06140;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1286197 1286289 . - . ID=gene-LNP58_RS06145;Name=LNP58_RS06145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06145;old_locus_tag=LNP58_06140;partial=true;pseudo=true;start_range=.,1286197 NZ_CP086372.1 Protein Homology CDS 1286197 1286289 . - 0 ID=cds-LNP58_RS06145;Parent=gene-LNP58_RS06145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS06145;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1286197;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1286429 1287127 . + . ID=gene-LNP58_RS06150;Name=LNP58_RS06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06150;old_locus_tag=LNP58_06145;partial=true;pseudo=true;start_range=.,1286429 NZ_CP086372.1 Protein Homology CDS 1286429 1287127 . + 0 ID=cds-LNP58_RS06150;Parent=gene-LNP58_RS06150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849560.1;locus_tag=LNP58_RS06150;partial=true;product=zinc-binding dehydrogenase;pseudo=true;start_range=.,1286429;transl_table=11 NZ_CP086372.1 RefSeq gene 1287212 1287376 . - . ID=gene-LNP58_RS06155;Name=LNP58_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06155;old_locus_tag=LNP58_06150 NZ_CP086372.1 Protein Homology CDS 1287212 1287376 . - 0 ID=cds-WP_011257537.1;Parent=gene-LNP58_RS06155;Dbxref=Genbank:WP_011257537.1;Name=WP_011257537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577683.1;locus_tag=LNP58_RS06155;product=hypothetical protein;protein_id=WP_011257537.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1287780 1288082 . + . ID=gene-LNP58_RS06160;Name=LNP58_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06160;old_locus_tag=LNP58_06155 NZ_CP086372.1 Protein Homology CDS 1287780 1288082 . + 0 ID=cds-WP_229001940.1;Parent=gene-LNP58_RS06160;Dbxref=Genbank:WP_229001940.1;Name=WP_229001940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157400.1;locus_tag=LNP58_RS06160;product=YkgJ family cysteine cluster protein;protein_id=WP_229001940.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1288092 1288313 . + . ID=gene-LNP58_RS06165;Name=LNP58_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06165;old_locus_tag=LNP58_06160 NZ_CP086372.1 Protein Homology CDS 1288092 1288313 . + 0 ID=cds-WP_011257535.1;Parent=gene-LNP58_RS06165;Dbxref=Genbank:WP_011257535.1;Name=WP_011257535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365365.1;locus_tag=LNP58_RS06165;product=hypothetical protein;protein_id=WP_011257535.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1288755 1288967 . - . ID=gene-LNP58_RS06170;Name=LNP58_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06170;old_locus_tag=LNP58_06165 NZ_CP086372.1 Protein Homology CDS 1288755 1288967 . - 0 ID=cds-WP_011257534.1;Parent=gene-LNP58_RS06170;Dbxref=Genbank:WP_011257534.1;Name=WP_011257534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577678.1;locus_tag=LNP58_RS06170;product=hypothetical protein;protein_id=WP_011257534.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1289306 1290043 . + . ID=gene-LNP58_RS06175;Name=LNP58_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06175;old_locus_tag=LNP58_06170 NZ_CP086372.1 Protein Homology CDS 1289306 1290043 . + 0 ID=cds-WP_012443985.1;Parent=gene-LNP58_RS06175;Dbxref=Genbank:WP_012443985.1;Name=WP_012443985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301270.1;locus_tag=LNP58_RS06175;product=DUF3348 domain-containing protein;protein_id=WP_012443985.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1290054 1292711 . + . ID=gene-LNP58_RS06180;Name=LNP58_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06180;old_locus_tag=LNP58_06175 NZ_CP086372.1 Protein Homology CDS 1290054 1292711 . + 0 ID=cds-WP_011407521.1;Parent=gene-LNP58_RS06180;Dbxref=Genbank:WP_011407521.1;Name=WP_011407521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407521.1;locus_tag=LNP58_RS06180;product=DUF802 domain-containing protein;protein_id=WP_011407521.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1292708 1293382 . + . ID=gene-LNP58_RS06185;Name=LNP58_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06185;old_locus_tag=LNP58_06180 NZ_CP086372.1 Protein Homology CDS 1292708 1293382 . + 0 ID=cds-WP_011257531.1;Parent=gene-LNP58_RS06185;Dbxref=Genbank:WP_011257531.1;Name=WP_011257531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911315.1;locus_tag=LNP58_RS06185;product=OmpA family protein;protein_id=WP_011257531.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1293379 1294044 . + . ID=gene-LNP58_RS06190;Name=LNP58_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06190;old_locus_tag=LNP58_06185 NZ_CP086372.1 Protein Homology CDS 1293379 1294044 . + 0 ID=cds-WP_011407520.1;Parent=gene-LNP58_RS06190;Dbxref=Genbank:WP_011407520.1;Name=WP_011407520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257530.1;locus_tag=LNP58_RS06190;product=DUF2894 domain-containing protein;protein_id=WP_011407520.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1294129 1296270 . - . ID=gene-LNP58_RS06195;Name=LNP58_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06195;old_locus_tag=LNP58_06190 NZ_CP086372.1 Protein Homology CDS 1294129 1296270 . - 0 ID=cds-WP_011407519.1;Parent=gene-LNP58_RS06195;Dbxref=Genbank:WP_011407519.1;Name=WP_011407519.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379725.1;locus_tag=LNP58_RS06195;product=TonB-dependent siderophore receptor;protein_id=WP_011407519.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1296360 1297628 . - . ID=gene-LNP58_RS06200;Name=LNP58_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06200;old_locus_tag=LNP58_06195 NZ_CP086372.1 Protein Homology CDS 1296360 1297628 . - 0 ID=cds-WP_011407518.1;Parent=gene-LNP58_RS06200;Dbxref=Genbank:WP_011407518.1;Name=WP_011407518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911318.1;locus_tag=LNP58_RS06200;product=DUF3526 domain-containing protein;protein_id=WP_011407518.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1297628 1299064 . - . ID=gene-LNP58_RS06205;Name=LNP58_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06205;old_locus_tag=LNP58_06200 NZ_CP086372.1 Protein Homology CDS 1297628 1299064 . - 0 ID=cds-WP_027703875.1;Parent=gene-LNP58_RS06205;Dbxref=Genbank:WP_027703875.1;Name=WP_027703875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900947.1;locus_tag=LNP58_RS06205;product=DUF3526 domain-containing protein;protein_id=WP_027703875.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1299075 1299797 . - . ID=gene-LNP58_RS06210;Name=LNP58_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06210;old_locus_tag=LNP58_06205 NZ_CP086372.1 Protein Homology CDS 1299075 1299797 . - 0 ID=cds-WP_011407516.1;Parent=gene-LNP58_RS06210;Dbxref=Genbank:WP_011407516.1;Name=WP_011407516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489275.1;locus_tag=LNP58_RS06210;product=ABC transporter ATP-binding protein;protein_id=WP_011407516.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1300027 1300316 . - . ID=gene-LNP58_RS06215;Name=LNP58_RS06215;end_range=1300316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06215;old_locus_tag=LNP58_06210;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1300027 1300316 . - 0 ID=cds-LNP58_RS06215;Parent=gene-LNP58_RS06215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1300316,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=LNP58_RS06215;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1300412 1300948 . + . ID=gene-LNP58_RS06220;Name=LNP58_RS06220;end_range=1300948,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06220;old_locus_tag=LNP58_06215;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1300412 1300948 . + 0 ID=cds-LNP58_RS06220;Parent=gene-LNP58_RS06220;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1300948,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS06220;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1301036 1302001 . + . ID=gene-LNP58_RS06225;Name=LNP58_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06225;old_locus_tag=LNP58_06220 NZ_CP086372.1 Protein Homology CDS 1301036 1302001 . + 0 ID=cds-WP_109181928.1;Parent=gene-LNP58_RS06225;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS06225;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1302324 1302713 . - . ID=gene-LNP58_RS06230;Name=LNP58_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06230;old_locus_tag=LNP58_06225 NZ_CP086372.1 Protein Homology CDS 1302324 1302713 . - 0 ID=cds-WP_011407513.1;Parent=gene-LNP58_RS06230;Dbxref=Genbank:WP_011407513.1;Name=WP_011407513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503162.1;locus_tag=LNP58_RS06230;product=hypothetical protein;protein_id=WP_011407513.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1302782 1304018 . + . ID=gene-LNP58_RS06235;Name=LNP58_RS06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06235;old_locus_tag=LNP58_06230;pseudo=true NZ_CP086372.1 Protein Homology CDS 1302782 1304018 . + 0 ID=cds-LNP58_RS06235;Parent=gene-LNP58_RS06235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS06235;product=ISL3-like element ISXoo13 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1304199 1304339 . - . ID=gene-LNP58_RS06240;Name=LNP58_RS06240;end_range=1304339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06240;old_locus_tag=LNP58_06235;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1304199 1304339 . - 0 ID=cds-LNP58_RS06240;Parent=gene-LNP58_RS06240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006306,GO:0003677,GO:0008170;end_range=1304339,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=LNP58_RS06240;partial=true;product=DNA methyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1304371 1305471 . - . ID=gene-LNP58_RS06245;Name=LNP58_RS06245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06245;old_locus_tag=LNP58_06240;pseudo=true NZ_CP086372.1 Protein Homology CDS 1304371 1305471 . - 0 ID=cds-LNP58_RS06245;Parent=gene-LNP58_RS06245;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS06245;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1305682 1305810 . + . ID=gene-LNP58_RS06250;Name=LNP58_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06250;old_locus_tag=LNP58_06245 NZ_CP086372.1 GeneMarkS-2+ CDS 1305682 1305810 . + 0 ID=cds-WP_011257523.1;Parent=gene-LNP58_RS06250;Dbxref=Genbank:WP_011257523.1;Name=WP_011257523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS06250;product=AAA family ATPase;protein_id=WP_011257523.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1305954 1306199 . + . ID=gene-LNP58_RS06255;Name=LNP58_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06255;old_locus_tag=LNP58_06250 NZ_CP086372.1 Protein Homology CDS 1305954 1306199 . + 0 ID=cds-WP_011407508.1;Parent=gene-LNP58_RS06255;Dbxref=Genbank:WP_011407508.1;Name=WP_011407508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364111.1;locus_tag=LNP58_RS06255;product=hypothetical protein;protein_id=WP_011407508.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1306196 1306468 . + . ID=gene-LNP58_RS06260;Name=LNP58_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06260;old_locus_tag=LNP58_06255 NZ_CP086372.1 Protein Homology CDS 1306196 1306468 . + 0 ID=cds-WP_011257521.1;Parent=gene-LNP58_RS06260;Dbxref=Genbank:WP_011257521.1;Name=WP_011257521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408131.1;locus_tag=LNP58_RS06260;product=hypothetical protein;protein_id=WP_011257521.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1306465 1306671 . + . ID=gene-LNP58_RS06265;Name=LNP58_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06265;old_locus_tag=LNP58_06260 NZ_CP086372.1 Protein Homology CDS 1306465 1306671 . + 0 ID=cds-WP_011257520.1;Parent=gene-LNP58_RS06265;Dbxref=Genbank:WP_011257520.1;Name=WP_011257520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408130.1;locus_tag=LNP58_RS06265;product=hypothetical protein;protein_id=WP_011257520.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1306668 1306892 . + . ID=gene-LNP58_RS06270;Name=LNP58_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06270;old_locus_tag=LNP58_06265 NZ_CP086372.1 Protein Homology CDS 1306668 1306892 . + 0 ID=cds-WP_024745954.1;Parent=gene-LNP58_RS06270;Dbxref=Genbank:WP_024745954.1;Name=WP_024745954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174376.1;locus_tag=LNP58_RS06270;product=hypothetical protein;protein_id=WP_024745954.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1306892 1308079 . + . ID=gene-LNP58_RS06275;Name=LNP58_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06275;old_locus_tag=LNP58_06270 NZ_CP086372.1 Protein Homology CDS 1306892 1308079 . + 0 ID=cds-WP_011407507.1;Parent=gene-LNP58_RS06275;Dbxref=Genbank:WP_011407507.1;Name=WP_011407507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038129.1;locus_tag=LNP58_RS06275;product=integrase;protein_id=WP_011407507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1308149 1308224 . - . ID=gene-LNP58_RS06280;Name=LNP58_RS06280;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS06280;old_locus_tag=LNP58_06275 NZ_CP086372.1 tRNAscan-SE tRNA 1308149 1308224 . - . ID=rna-LNP58_RS06280;Parent=gene-LNP58_RS06280;anticodon=(pos:complement(1308189..1308191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06280;product=tRNA-Ile NZ_CP086372.1 tRNAscan-SE exon 1308149 1308224 . - . ID=exon-LNP58_RS06280-1;Parent=rna-LNP58_RS06280;anticodon=(pos:complement(1308189..1308191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06280;product=tRNA-Ile NZ_CP086372.1 RefSeq gene 1308708 1309028 . - . ID=gene-LNP58_RS06285;Name=LNP58_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06285;old_locus_tag=LNP58_06280 NZ_CP086372.1 Protein Homology CDS 1308708 1309028 . - 0 ID=cds-WP_011407506.1;Parent=gene-LNP58_RS06285;Dbxref=Genbank:WP_011407506.1;Name=WP_011407506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157070.1;locus_tag=LNP58_RS06285;product=hypothetical protein;protein_id=WP_011407506.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1309221 1311095 . - . ID=gene-LNP58_RS06290;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LNP58_RS06290;old_locus_tag=LNP58_06285 NZ_CP086372.1 Protein Homology CDS 1309221 1311095 . - 0 ID=cds-WP_011407505.1;Parent=gene-LNP58_RS06290;Dbxref=Genbank:WP_011407505.1;Name=WP_011407505.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157069.1;locus_tag=LNP58_RS06290;product=RNA polymerase sigma factor RpoD;protein_id=WP_011407505.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1311204 1311644 . - . ID=gene-LNP58_RS06295;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LNP58_RS06295;old_locus_tag=LNP58_06290 NZ_CP086372.1 Protein Homology CDS 1311204 1311644 . - 0 ID=cds-WP_011257505.1;Parent=gene-LNP58_RS06295;Dbxref=Genbank:WP_011257505.1;Name=WP_011257505.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453176.1;locus_tag=LNP58_RS06295;product=D-aminoacyl-tRNA deacylase;protein_id=WP_011257505.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1311643 1312659 . + . ID=gene-LNP58_RS06300;Name=LNP58_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06300;old_locus_tag=LNP58_06295 NZ_CP086372.1 Protein Homology CDS 1311643 1312659 . + 0 ID=cds-WP_011257504.1;Parent=gene-LNP58_RS06300;Dbxref=Genbank:WP_011257504.1;Name=WP_011257504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348771.1;locus_tag=LNP58_RS06300;product=lauroyl acyltransferase;protein_id=WP_011257504.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1312718 1312797 . - . ID=gene-LNP58_RS06305;Name=LNP58_RS06305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06305;old_locus_tag=LNP58_06300 NZ_CP086372.1 cmsearch ncRNA 1312718 1312797 . - . ID=rna-LNP58_RS06305;Parent=gene-LNP58_RS06305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06305;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1312718 1312797 . - . ID=exon-LNP58_RS06305-1;Parent=rna-LNP58_RS06305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06305;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1312859 1313380 . - . ID=gene-LNP58_RS06310;Name=LNP58_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06310;old_locus_tag=LNP58_06305 NZ_CP086372.1 Protein Homology CDS 1312859 1313380 . - 0 ID=cds-WP_011407503.1;Parent=gene-LNP58_RS06310;Dbxref=Genbank:WP_011407503.1;Name=WP_011407503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484403.1;locus_tag=LNP58_RS06310;product=GNAT family N-acetyltransferase;protein_id=WP_011407503.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1313623 1314759 . + . ID=gene-LNP58_RS06315;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LNP58_RS06315;old_locus_tag=LNP58_06310 NZ_CP086372.1 Protein Homology CDS 1313623 1314759 . + 0 ID=cds-WP_229001921.1;Parent=gene-LNP58_RS06315;Dbxref=Genbank:WP_229001921.1;Name=WP_229001921.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162247.1;locus_tag=LNP58_RS06315;product=GTP cyclohydrolase II RibA;protein_id=WP_229001921.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1314869 1315372 . + . ID=gene-LNP58_RS06320;Name=LNP58_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06320;old_locus_tag=LNP58_06315 NZ_CP086372.1 Protein Homology CDS 1314869 1315372 . + 0 ID=cds-WP_042465436.1;Parent=gene-LNP58_RS06320;Dbxref=Genbank:WP_042465436.1;Name=WP_042465436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504874.1;locus_tag=LNP58_RS06320;product=PH domain-containing protein;protein_id=WP_042465436.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1315369 1316835 . + . ID=gene-LNP58_RS06325;Name=LNP58_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06325;old_locus_tag=LNP58_06320 NZ_CP086372.1 Protein Homology CDS 1315369 1316835 . + 0 ID=cds-WP_011257500.1;Parent=gene-LNP58_RS06325;Dbxref=Genbank:WP_011257500.1;Name=WP_011257500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157062.1;locus_tag=LNP58_RS06325;product=PH domain-containing protein;protein_id=WP_011257500.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1317001 1318059 . - . ID=gene-LNP58_RS06330;Name=LNP58_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06330;old_locus_tag=LNP58_06325 NZ_CP086372.1 Protein Homology CDS 1317001 1318059 . - 0 ID=cds-WP_011257499.1;Parent=gene-LNP58_RS06330;Dbxref=Genbank:WP_011257499.1;Name=WP_011257499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157061.1;locus_tag=LNP58_RS06330;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011257499.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1318060 1318884 . + . ID=gene-LNP58_RS06335;Name=LNP58_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06335;old_locus_tag=LNP58_06330 NZ_CP086372.1 Protein Homology CDS 1318060 1318884 . + 0 ID=cds-WP_011257498.1;Parent=gene-LNP58_RS06335;Dbxref=Genbank:WP_011257498.1;Name=WP_011257498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115138.1;locus_tag=LNP58_RS06335;product=glycosyltransferase family 2 protein;protein_id=WP_011257498.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1319082 1320359 . - . ID=gene-LNP58_RS06340;Name=LNP58_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06340;old_locus_tag=LNP58_06335 NZ_CP086372.1 Protein Homology CDS 1319082 1320359 . - 0 ID=cds-WP_011257497.1;Parent=gene-LNP58_RS06340;Dbxref=Genbank:WP_011257497.1;Name=WP_011257497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504878.1;locus_tag=LNP58_RS06340;product=O-antigen ligase;protein_id=WP_011257497.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1320524 1322245 . - . ID=gene-LNP58_RS06345;Name=LNP58_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06345;old_locus_tag=LNP58_06340 NZ_CP086372.1 Protein Homology CDS 1320524 1322245 . - 0 ID=cds-WP_011257496.1;Parent=gene-LNP58_RS06345;Dbxref=Genbank:WP_011257496.1;Name=WP_011257496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091215.1;locus_tag=LNP58_RS06345;product=glycosyltransferase family 39 protein;protein_id=WP_011257496.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1322296 1323609 . - . ID=gene-LNP58_RS06350;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LNP58_RS06350;old_locus_tag=LNP58_06345 NZ_CP086372.1 Protein Homology CDS 1322296 1323609 . - 0 ID=cds-WP_075242207.1;Parent=gene-LNP58_RS06350;Dbxref=Genbank:WP_075242207.1;Name=WP_075242207.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=LNP58_RS06350;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_075242207.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1323609 1324532 . - . ID=gene-LNP58_RS06355;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LNP58_RS06355;old_locus_tag=LNP58_06350 NZ_CP086372.1 Protein Homology CDS 1323609 1324532 . - 0 ID=cds-WP_011257494.1;Parent=gene-LNP58_RS06355;Dbxref=Genbank:WP_011257494.1;Name=WP_011257494.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921922.1;locus_tag=LNP58_RS06355;product=methionyl-tRNA formyltransferase;protein_id=WP_011257494.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1324926 1325438 . - . ID=gene-LNP58_RS06360;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LNP58_RS06360;old_locus_tag=LNP58_06355 NZ_CP086372.1 Protein Homology CDS 1324926 1325438 . - 0 ID=cds-WP_011257493.1;Parent=gene-LNP58_RS06360;Dbxref=Genbank:WP_011257493.1;Name=WP_011257493.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911379.1;locus_tag=LNP58_RS06360;product=peptide deformylase;protein_id=WP_011257493.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1325571 1326707 . + . ID=gene-LNP58_RS06365;Name=LNP58_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06365;old_locus_tag=LNP58_06360 NZ_CP086372.1 Protein Homology CDS 1325571 1326707 . + 0 ID=cds-WP_011407499.1;Parent=gene-LNP58_RS06365;Dbxref=Genbank:WP_011407499.1;Name=WP_011407499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927359.1;locus_tag=LNP58_RS06365;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_011407499.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1326779 1327921 . + . ID=gene-LNP58_RS06370;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LNP58_RS06370;old_locus_tag=LNP58_06365 NZ_CP086372.1 Protein Homology CDS 1326779 1327921 . + 0 ID=cds-WP_011257491.1;Parent=gene-LNP58_RS06370;Dbxref=Genbank:WP_011257491.1;Name=WP_011257491.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091219.1;locus_tag=LNP58_RS06370;product=DNA-processing protein DprA;protein_id=WP_011257491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1327964 1328437 . + . ID=gene-LNP58_RS06375;Name=LNP58_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06375;old_locus_tag=LNP58_06370 NZ_CP086372.1 Protein Homology CDS 1327964 1328437 . + 0 ID=cds-WP_011257490.1;Parent=gene-LNP58_RS06375;Dbxref=Genbank:WP_011257490.1;Name=WP_011257490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159357.1;locus_tag=LNP58_RS06375;product=DUF494 family protein;protein_id=WP_011257490.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1328478 1329200 . + . ID=gene-LNP58_RS06380;Name=LNP58_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06380;old_locus_tag=LNP58_06375 NZ_CP086372.1 Protein Homology CDS 1328478 1329200 . + 0 ID=cds-WP_069959711.1;Parent=gene-LNP58_RS06380;Dbxref=Genbank:WP_069959711.1;Name=WP_069959711.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348786.1;locus_tag=LNP58_RS06380;product=pilin;protein_id=WP_069959711.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1329242 1330516 . + . ID=gene-LNP58_RS06385;Name=LNP58_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06385;old_locus_tag=LNP58_06380 NZ_CP086372.1 Protein Homology CDS 1329242 1330516 . + 0 ID=cds-WP_011257488.1;Parent=gene-LNP58_RS06385;Dbxref=Genbank:WP_011257488.1;Name=WP_011257488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112322.1;locus_tag=LNP58_RS06385;product=RDD family protein;protein_id=WP_011257488.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1330699 1333191 . + . ID=gene-LNP58_RS06390;Name=LNP58_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06390;old_locus_tag=LNP58_06385 NZ_CP086372.1 Protein Homology CDS 1330699 1333191 . + 0 ID=cds-WP_011257487.1;Parent=gene-LNP58_RS06390;Dbxref=Genbank:WP_011257487.1;Name=WP_011257487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370069.1;locus_tag=LNP58_RS06390;product=DNA topoisomerase I;protein_id=WP_011257487.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1333202 1333765 . + . ID=gene-LNP58_RS06395;Name=LNP58_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06395;old_locus_tag=LNP58_06390 NZ_CP086372.1 Protein Homology CDS 1333202 1333765 . + 0 ID=cds-WP_011257486.1;Parent=gene-LNP58_RS06395;Dbxref=Genbank:WP_011257486.1;Name=WP_011257486.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921907.1;locus_tag=LNP58_RS06395;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_011257486.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1333989 1334762 . + . ID=gene-LNP58_RS06400;Name=LNP58_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06400;old_locus_tag=LNP58_06395 NZ_CP086372.1 Protein Homology CDS 1333989 1334762 . + 0 ID=cds-WP_011407497.1;Parent=gene-LNP58_RS06400;Dbxref=Genbank:WP_011407497.1;Name=WP_011407497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572028.1;locus_tag=LNP58_RS06400;product=hypothetical protein;protein_id=WP_011407497.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1334786 1335433 . + . ID=gene-LNP58_RS06405;Name=LNP58_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06405;old_locus_tag=LNP58_06400 NZ_CP086372.1 Protein Homology CDS 1334786 1335433 . + 0 ID=cds-WP_171970790.1;Parent=gene-LNP58_RS06405;Dbxref=Genbank:WP_171970790.1;Name=WP_171970790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157047.1;locus_tag=LNP58_RS06405;product=DUF4124 domain-containing protein;protein_id=WP_171970790.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1335595 1336371 . - . ID=gene-LNP58_RS06410;Name=LNP58_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06410;old_locus_tag=LNP58_06405 NZ_CP086372.1 Protein Homology CDS 1335595 1336371 . - 0 ID=cds-WP_011407495.1;Parent=gene-LNP58_RS06410;Dbxref=Genbank:WP_011407495.1;Name=WP_011407495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1;locus_tag=LNP58_RS06410;product=SDR family oxidoreductase;protein_id=WP_011407495.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1336478 1336693 . + . ID=gene-LNP58_RS06415;Name=LNP58_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06415;old_locus_tag=LNP58_06410 NZ_CP086372.1 Protein Homology CDS 1336478 1336693 . + 0 ID=cds-WP_011257482.1;Parent=gene-LNP58_RS06415;Dbxref=Genbank:WP_011257482.1;Name=WP_011257482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157045.1;locus_tag=LNP58_RS06415;product=hypothetical protein;protein_id=WP_011257482.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1336879 1338780 . - . ID=gene-LNP58_RS06420;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LNP58_RS06420;old_locus_tag=LNP58_06415 NZ_CP086372.1 Protein Homology CDS 1336879 1338780 . - 0 ID=cds-WP_011407494.1;Parent=gene-LNP58_RS06420;Dbxref=Genbank:WP_011407494.1;Name=WP_011407494.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300058.1;locus_tag=LNP58_RS06420;product=signal peptide peptidase SppA;protein_id=WP_011407494.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1338865 1340241 . - . ID=gene-LNP58_RS06425;Name=LNP58_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06425;old_locus_tag=LNP58_06420 NZ_CP086372.1 Protein Homology CDS 1338865 1340241 . - 0 ID=cds-WP_229001922.1;Parent=gene-LNP58_RS06425;Dbxref=Genbank:WP_229001922.1;Name=WP_229001922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091226.1;locus_tag=LNP58_RS06425;product=MATE family efflux transporter;protein_id=WP_229001922.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1340522 1341704 . + . ID=gene-LNP58_RS06430;Name=LNP58_RS06430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06430;old_locus_tag=LNP58_06425;pseudo=true NZ_CP086372.1 Protein Homology CDS 1340522 1341704 . + 0 ID=cds-LNP58_RS06430;Parent=gene-LNP58_RS06430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969561.1;locus_tag=LNP58_RS06430;product=DUF3667 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1342035 1342637 . - . ID=gene-LNP58_RS06435;Name=LNP58_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06435;old_locus_tag=LNP58_06430 NZ_CP086372.1 Protein Homology CDS 1342035 1342637 . - 0 ID=cds-WP_069959707.1;Parent=gene-LNP58_RS06435;Dbxref=Genbank:WP_069959707.1;Name=WP_069959707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443959.1;locus_tag=LNP58_RS06435;product=DUF3106 domain-containing protein;protein_id=WP_069959707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1342621 1343646 . - . ID=gene-LNP58_RS06440;Name=LNP58_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06440;old_locus_tag=LNP58_06435 NZ_CP086372.1 Protein Homology CDS 1342621 1343646 . - 0 ID=cds-WP_011257477.1;Parent=gene-LNP58_RS06440;Dbxref=Genbank:WP_011257477.1;Name=WP_011257477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157040.1;locus_tag=LNP58_RS06440;product=hypothetical protein;protein_id=WP_011257477.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1344112 1346334 . + . ID=gene-LNP58_RS06445;Name=LNP58_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06445;old_locus_tag=LNP58_06440 NZ_CP086372.1 Protein Homology CDS 1344112 1346334 . + 0 ID=cds-WP_011257476.1;Parent=gene-LNP58_RS06445;Dbxref=Genbank:WP_011257476.1;Name=WP_011257476.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1;locus_tag=LNP58_RS06445;product=primosomal protein N';protein_id=WP_011257476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1346737 1347252 . + . ID=gene-LNP58_RS06450;Name=LNP58_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06450;old_locus_tag=LNP58_06445 NZ_CP086372.1 Protein Homology CDS 1346737 1347252 . + 0 ID=cds-WP_011257475.1;Parent=gene-LNP58_RS06450;Dbxref=Genbank:WP_011257475.1;Name=WP_011257475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510657.1;locus_tag=LNP58_RS06450;product=IS110 family transposase;protein_id=WP_011257475.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1347206 1347532 . - . ID=gene-LNP58_RS06455;Name=LNP58_RS06455;end_range=1347532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06455;old_locus_tag=LNP58_06450;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1347206 1347532 . - 0 ID=cds-LNP58_RS06455;Parent=gene-LNP58_RS06455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1347532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS06455;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1347526 1347711 . + . ID=gene-LNP58_RS06460;Name=LNP58_RS06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06460;old_locus_tag=LNP58_06455;partial=true;pseudo=true;start_range=.,1347526 NZ_CP086372.1 Protein Homology CDS 1347526 1347711 . + 0 ID=cds-LNP58_RS06460;Parent=gene-LNP58_RS06460;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161135.1;locus_tag=LNP58_RS06460;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1347526;transl_table=11 NZ_CP086372.1 RefSeq gene 1347782 1349101 . + . ID=gene-LNP58_RS06465;Name=LNP58_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06465;old_locus_tag=LNP58_06460 NZ_CP086372.1 Protein Homology CDS 1347782 1349101 . + 0 ID=cds-WP_011407489.1;Parent=gene-LNP58_RS06465;Dbxref=Genbank:WP_011407489.1;Name=WP_011407489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS06465;product=IS701-like element ISXo15 family transposase;protein_id=WP_011407489.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1349193 1349268 . - . ID=gene-LNP58_RS06470;Name=LNP58_RS06470;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06470;old_locus_tag=LNP58_06465 NZ_CP086372.1 cmsearch ncRNA 1349193 1349268 . - . ID=rna-LNP58_RS06470;Parent=gene-LNP58_RS06470;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06470;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1349193 1349268 . - . ID=exon-LNP58_RS06470-1;Parent=rna-LNP58_RS06470;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06470;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1349569 1350534 . + . ID=gene-LNP58_RS06475;Name=LNP58_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06475;old_locus_tag=LNP58_06470 NZ_CP086372.1 Protein Homology CDS 1349569 1350534 . + 0 ID=cds-WP_109181928.1-2;Parent=gene-LNP58_RS06475;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS06475;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1350718 1351050 . + . ID=gene-LNP58_RS06480;Name=LNP58_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06480;old_locus_tag=LNP58_06475 NZ_CP086372.1 Protein Homology CDS 1350718 1351050 . + 0 ID=cds-WP_011407487.1;Parent=gene-LNP58_RS06480;Dbxref=Genbank:WP_011407487.1;Name=WP_011407487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368153.1;locus_tag=LNP58_RS06480;product=divalent-cation tolerance protein CutA;protein_id=WP_011407487.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1351056 1353380 . + . ID=gene-LNP58_RS06485;Name=LNP58_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06485;old_locus_tag=LNP58_06480 NZ_CP086372.1 Protein Homology CDS 1351056 1353380 . + 0 ID=cds-WP_011407486.1;Parent=gene-LNP58_RS06485;Dbxref=Genbank:WP_011407486.1;Name=WP_011407486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346209.1;locus_tag=LNP58_RS06485;product=protein-disulfide reductase DsbD;protein_id=WP_011407486.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1354220 1354666 . + . ID=gene-LNP58_RS06490;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LNP58_RS06490;old_locus_tag=LNP58_06485 NZ_CP086372.1 Protein Homology CDS 1354220 1354666 . + 0 ID=cds-WP_011407485.1;Parent=gene-LNP58_RS06490;Dbxref=Genbank:WP_011407485.1;Name=WP_011407485.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169658.1;locus_tag=LNP58_RS06490;product=type II 3-dehydroquinate dehydratase;protein_id=WP_011407485.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1354765 1355250 . + . ID=gene-LNP58_RS06495;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LNP58_RS06495;old_locus_tag=LNP58_06490 NZ_CP086372.1 Protein Homology CDS 1354765 1355250 . + 0 ID=cds-WP_011257470.1;Parent=gene-LNP58_RS06495;Dbxref=Genbank:WP_011257470.1;Name=WP_011257470.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155928.1;locus_tag=LNP58_RS06495;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_011257470.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1355283 1355690 . + . ID=gene-LNP58_RS06500;Name=LNP58_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06500;old_locus_tag=LNP58_06495 NZ_CP086372.1 Protein Homology CDS 1355283 1355690 . + 0 ID=cds-WP_069959706.1;Parent=gene-LNP58_RS06500;Dbxref=Genbank:WP_069959706.1;Name=WP_069959706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407484.1;locus_tag=LNP58_RS06500;product=four helix bundle protein;protein_id=WP_069959706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1355726 1357093 . + . ID=gene-LNP58_RS06505;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LNP58_RS06505;old_locus_tag=LNP58_06500 NZ_CP086372.1 Protein Homology CDS 1355726 1357093 . + 0 ID=cds-WP_010368143.1;Parent=gene-LNP58_RS06505;Dbxref=Genbank:WP_010368143.1;Name=WP_010368143.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660825.1;locus_tag=LNP58_RS06505;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_010368143.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1357232 1357597 . - . ID=gene-LNP58_RS06510;Name=LNP58_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06510;old_locus_tag=LNP58_06505 NZ_CP086372.1 Protein Homology CDS 1357232 1357597 . - 0 ID=cds-WP_011257468.1;Parent=gene-LNP58_RS06510;Dbxref=Genbank:WP_011257468.1;Name=WP_011257468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257468.1;locus_tag=LNP58_RS06510;product=hypothetical protein;protein_id=WP_011257468.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1357594 1358519 . - . ID=gene-LNP58_RS06515;Name=LNP58_RS06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06515;old_locus_tag=LNP58_06510;pseudo=true NZ_CP086372.1 Protein Homology CDS 1357594 1358519 . - 0 ID=cds-LNP58_RS06515;Parent=gene-LNP58_RS06515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301597.1;locus_tag=LNP58_RS06515;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1359465 1360406 . + . ID=gene-LNP58_RS06520;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LNP58_RS06520;old_locus_tag=LNP58_06515 NZ_CP086372.1 Protein Homology CDS 1359465 1360406 . + 0 ID=cds-WP_011257466.1;Parent=gene-LNP58_RS06520;Dbxref=Genbank:WP_011257466.1;Name=WP_011257466.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257466.1;locus_tag=LNP58_RS06520;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_011257466.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1360401 1360475 . - . ID=gene-LNP58_RS06525;Name=LNP58_RS06525;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06525;old_locus_tag=LNP58_06520 NZ_CP086372.1 cmsearch ncRNA 1360401 1360475 . - . ID=rna-LNP58_RS06525;Parent=gene-LNP58_RS06525;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06525;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1360401 1360475 . - . ID=exon-LNP58_RS06525-1;Parent=rna-LNP58_RS06525;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06525;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1360553 1361068 . - . ID=gene-LNP58_RS06530;Name=LNP58_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06530;old_locus_tag=LNP58_06525 NZ_CP086372.1 Protein Homology CDS 1360553 1361068 . - 0 ID=cds-WP_041181944.1;Parent=gene-LNP58_RS06530;Dbxref=Genbank:WP_041181944.1;Name=WP_041181944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571864.1;locus_tag=LNP58_RS06530;product=hypothetical protein;protein_id=WP_041181944.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1361212 1361589 . + . ID=gene-LNP58_RS06535;Name=LNP58_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06535;old_locus_tag=LNP58_06530 NZ_CP086372.1 Protein Homology CDS 1361212 1361589 . + 0 ID=cds-WP_011257464.1;Parent=gene-LNP58_RS06535;Dbxref=Genbank:WP_011257464.1;Name=WP_011257464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997552.1;locus_tag=LNP58_RS06535;product=helix-turn-helix domain-containing protein;protein_id=WP_011257464.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1361913 1363145 . + . ID=gene-LNP58_RS06540;Name=LNP58_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06540;old_locus_tag=LNP58_06535 NZ_CP086372.1 Protein Homology CDS 1361913 1363145 . + 0 ID=cds-WP_011257463.1;Parent=gene-LNP58_RS06540;Dbxref=Genbank:WP_011257463.1;Name=WP_011257463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920136.1;locus_tag=LNP58_RS06540;product=DUF3426 domain-containing protein;protein_id=WP_011257463.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1363252 1363524 . + . ID=gene-LNP58_RS06545;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LNP58_RS06545;old_locus_tag=LNP58_06540 NZ_CP086372.1 Protein Homology CDS 1363252 1363524 . + 0 ID=cds-WP_011257462.1;Parent=gene-LNP58_RS06545;Dbxref=Genbank:WP_011257462.1;Name=WP_011257462.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920134.1;locus_tag=LNP58_RS06545;product=DNA-binding transcriptional regulator Fis;protein_id=WP_011257462.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1363929 1364120 . + . ID=gene-LNP58_RS06550;Name=LNP58_RS06550;end_range=1364120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06550;old_locus_tag=LNP58_06545;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1363929 1364120 . + 0 ID=cds-LNP58_RS06550;Parent=gene-LNP58_RS06550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1364120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS06550;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1364209 1365174 . + . ID=gene-LNP58_RS06555;Name=LNP58_RS06555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06555;old_locus_tag=LNP58_06550;pseudo=true NZ_CP086372.1 Protein Homology CDS 1364209 1365174 . + 0 ID=cds-LNP58_RS06555;Parent=gene-LNP58_RS06555;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS06555;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1365180 1365569 . - . ID=gene-LNP58_RS06560;Name=LNP58_RS06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06560;old_locus_tag=LNP58_06555;partial=true;pseudo=true;start_range=.,1365180 NZ_CP086372.1 Protein Homology CDS 1365180 1365569 . - 0 ID=cds-LNP58_RS06560;Parent=gene-LNP58_RS06560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155940.1;locus_tag=LNP58_RS06560;partial=true;product=serine/threonine protein phosphatase;pseudo=true;start_range=.,1365180;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1365566 1367254 . - . ID=gene-LNP58_RS06565;Name=LNP58_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06565;old_locus_tag=LNP58_06560;pseudo=true NZ_CP086372.1 Protein Homology CDS 1365566 1367254 . - 0 ID=cds-LNP58_RS06565;Parent=gene-LNP58_RS06565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920129.1;locus_tag=LNP58_RS06565;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1367412 1368030 . - . ID=gene-LNP58_RS06570;Name=LNP58_RS06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06570;old_locus_tag=LNP58_06565;pseudo=true NZ_CP086372.1 Protein Homology CDS 1367412 1368030 . - 0 ID=cds-LNP58_RS06570;Parent=gene-LNP58_RS06570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967899.1;locus_tag=LNP58_RS06570;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1368104 1369687 . + . ID=gene-LNP58_RS06575;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LNP58_RS06575;old_locus_tag=LNP58_06570 NZ_CP086372.1 Protein Homology CDS 1368104 1369687 . + 0 ID=cds-WP_011407474.1;Parent=gene-LNP58_RS06575;Dbxref=Genbank:WP_011407474.1;Name=WP_011407474.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302295.1;locus_tag=LNP58_RS06575;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_011407474.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1369737 1370972 . + . ID=gene-LNP58_RS06580;Name=LNP58_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06580;old_locus_tag=LNP58_06575 NZ_CP086372.1 Protein Homology CDS 1369737 1370972 . + 0 ID=cds-WP_011257455.1;Parent=gene-LNP58_RS06580;Dbxref=Genbank:WP_011257455.1;Name=WP_011257455.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257455.1;locus_tag=LNP58_RS06580;product=AAA family ATPase;protein_id=WP_011257455.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1370972 1371586 . + . ID=gene-LNP58_RS06585;Name=LNP58_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06585;old_locus_tag=LNP58_06580 NZ_CP086372.1 Protein Homology CDS 1370972 1371586 . + 0 ID=cds-WP_011407473.1;Parent=gene-LNP58_RS06585;Dbxref=Genbank:WP_011407473.1;Name=WP_011407473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379465.1;locus_tag=LNP58_RS06585;product=DUF4276 family protein;protein_id=WP_011407473.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1371607 1372896 . + . ID=gene-LNP58_RS06590;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LNP58_RS06590;old_locus_tag=LNP58_06585 NZ_CP086372.1 Protein Homology CDS 1371607 1372896 . + 0 ID=cds-WP_011257454.1;Parent=gene-LNP58_RS06590;Dbxref=Genbank:WP_011257454.1;Name=WP_011257454.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257454.1;locus_tag=LNP58_RS06590;product=phosphoribosylamine--glycine ligase;protein_id=WP_011257454.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1373049 1374242 . + . ID=gene-LNP58_RS06595;Name=LNP58_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06595;old_locus_tag=LNP58_06590 NZ_CP086372.1 Protein Homology CDS 1373049 1374242 . + 0 ID=cds-WP_011257453.1;Parent=gene-LNP58_RS06595;Dbxref=Genbank:WP_011257453.1;Name=WP_011257453.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257453.1;locus_tag=LNP58_RS06595;product=AAA family ATPase;protein_id=WP_011257453.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1374311 1374820 . + . ID=gene-LNP58_RS06600;Name=LNP58_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06600;old_locus_tag=LNP58_06595 NZ_CP086372.1 Protein Homology CDS 1374311 1374820 . + 0 ID=cds-WP_229001923.1;Parent=gene-LNP58_RS06600;Dbxref=Genbank:WP_229001923.1;Name=WP_229001923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018055074.1;locus_tag=LNP58_RS06600;product=DUF4276 family protein;protein_id=WP_229001923.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1375046 1377259 . + . ID=gene-LNP58_RS06605;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=LNP58_RS06605;old_locus_tag=LNP58_06600 NZ_CP086372.1 Protein Homology CDS 1375046 1377259 . + 0 ID=cds-WP_011257452.1;Parent=gene-LNP58_RS06605;Dbxref=Genbank:WP_011257452.1;Name=WP_011257452.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155946.1;locus_tag=LNP58_RS06605;product=YccS family putative transporter;protein_id=WP_011257452.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1377390 1378579 . - . ID=gene-LNP58_RS06610;Name=LNP58_RS06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06610;old_locus_tag=LNP58_06605;pseudo=true NZ_CP086372.1 Protein Homology CDS 1377390 1378579 . - 0 ID=cds-LNP58_RS06610;Parent=gene-LNP58_RS06610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155947.1;locus_tag=LNP58_RS06610;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1378677 1379550 . + . ID=gene-LNP58_RS06615;Name=LNP58_RS06615;end_range=1379550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06615;old_locus_tag=LNP58_06610;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1378677 1379550 . + 0 ID=cds-LNP58_RS06615;Parent=gene-LNP58_RS06615;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1379550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155948.1;locus_tag=LNP58_RS06615;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1379651 1381573 . + . ID=gene-LNP58_RS06620;Name=LNP58_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06620;old_locus_tag=LNP58_06615 NZ_CP086372.1 Protein Homology CDS 1379651 1381573 . + 0 ID=cds-WP_011257451.1;Parent=gene-LNP58_RS06620;Dbxref=Genbank:WP_011257451.1;Name=WP_011257451.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504924.1;locus_tag=LNP58_RS06620;product=MFS transporter;protein_id=WP_011257451.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1382034 1382414 . + . ID=gene-LNP58_RS06625;Name=LNP58_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06625;old_locus_tag=LNP58_06620 NZ_CP086372.1 Protein Homology CDS 1382034 1382414 . + 0 ID=cds-WP_011257450.1;Parent=gene-LNP58_RS06625;Dbxref=Genbank:WP_011257450.1;Name=WP_011257450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257450.1;locus_tag=LNP58_RS06625;product=CD225/dispanin family protein;protein_id=WP_011257450.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1382417 1382824 . + . ID=gene-LNP58_RS06630;Name=LNP58_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06630;old_locus_tag=LNP58_06625 NZ_CP086372.1 Protein Homology CDS 1382417 1382824 . + 0 ID=cds-WP_075242191.1;Parent=gene-LNP58_RS06630;Dbxref=Genbank:WP_075242191.1;Name=WP_075242191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407466.1;locus_tag=LNP58_RS06630;product=DUF2752 domain-containing protein;protein_id=WP_075242191.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1383146 1384036 . - . ID=gene-LNP58_RS06635;Name=LNP58_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06635;old_locus_tag=LNP58_06630 NZ_CP086372.1 Protein Homology CDS 1383146 1384036 . - 0 ID=cds-WP_011257449.1;Parent=gene-LNP58_RS06635;Dbxref=Genbank:WP_011257449.1;Name=WP_011257449.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768466.1;locus_tag=LNP58_RS06635;product=cobalamin biosynthesis protein;protein_id=WP_011257449.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1384110 1385000 . - . ID=gene-LNP58_RS06640;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=LNP58_RS06640;old_locus_tag=LNP58_06635 NZ_CP086372.1 Protein Homology CDS 1384110 1385000 . - 0 ID=cds-WP_011257448.1;Parent=gene-LNP58_RS06640;Dbxref=Genbank:WP_011257448.1;Name=WP_011257448.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914180.1;locus_tag=LNP58_RS06640;product=NAD(+) diphosphatase;protein_id=WP_011257448.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1385307 1386587 . - . ID=gene-LNP58_RS06645;Name=LNP58_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06645;old_locus_tag=LNP58_06640 NZ_CP086372.1 Protein Homology CDS 1385307 1386587 . - 0 ID=cds-WP_011407465.1;Parent=gene-LNP58_RS06645;Dbxref=Genbank:WP_011407465.1;Name=WP_011407465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914181.1;locus_tag=LNP58_RS06645;product=lipase;protein_id=WP_011407465.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1387514 1387900 . - . ID=gene-LNP58_RS06650;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LNP58_RS06650;old_locus_tag=LNP58_06645 NZ_CP086372.1 Protein Homology CDS 1387514 1387900 . - 0 ID=cds-WP_011407463.1;Parent=gene-LNP58_RS06650;Dbxref=Genbank:WP_011407463.1;Name=WP_011407463.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1;locus_tag=LNP58_RS06650;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_011407463.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1387979 1388742 . - . ID=gene-LNP58_RS06655;Name=LNP58_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06655;old_locus_tag=LNP58_06650 NZ_CP086372.1 Protein Homology CDS 1388427 1388742 . - 0 ID=cds-WP_094187715.1-2;Parent=gene-LNP58_RS06655;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS06655;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1387979 1388427 . - 2 ID=cds-WP_094187715.1-2;Parent=gene-LNP58_RS06655;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS06655;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1388789 1389238 . - . ID=gene-LNP58_RS06660;Name=LNP58_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06660;old_locus_tag=LNP58_06655;pseudo=true NZ_CP086372.1 Protein Homology CDS 1388789 1389238 . - 0 ID=cds-LNP58_RS06660;Parent=gene-LNP58_RS06660;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379445.1;locus_tag=LNP58_RS06660;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1389225 1390013 . - . ID=gene-LNP58_RS06665;Name=LNP58_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06665;old_locus_tag=LNP58_06660 NZ_CP086372.1 Protein Homology CDS 1389225 1390013 . - 0 ID=cds-WP_052285780.1;Parent=gene-LNP58_RS06665;Dbxref=Genbank:WP_052285780.1;Name=WP_052285780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808222.1;locus_tag=LNP58_RS06665;product=hypothetical protein;protein_id=WP_052285780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1390121 1390747 . + . ID=gene-LNP58_RS06670;Name=LNP58_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06670;old_locus_tag=LNP58_06665 NZ_CP086372.1 Protein Homology CDS 1390121 1390747 . + 0 ID=cds-WP_011407461.1;Parent=gene-LNP58_RS06670;Dbxref=Genbank:WP_011407461.1;Name=WP_011407461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808223.1;locus_tag=LNP58_RS06670;product=DUF4126 domain-containing protein;protein_id=WP_011407461.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1390786 1392756 . + . ID=gene-LNP58_RS06675;Name=LNP58_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06675;old_locus_tag=LNP58_06670 NZ_CP086372.1 Protein Homology CDS 1390786 1392756 . + 0 ID=cds-WP_075242157.1;Parent=gene-LNP58_RS06675;Dbxref=Genbank:WP_075242157.1;Name=WP_075242157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462808.1;locus_tag=LNP58_RS06675;product=EAL domain-containing response regulator;protein_id=WP_075242157.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1392757 1395066 . + . ID=gene-LNP58_RS06680;Name=LNP58_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06680;old_locus_tag=LNP58_06675 NZ_CP086372.1 Protein Homology CDS 1392757 1395066 . + 0 ID=cds-WP_011257440.1;Parent=gene-LNP58_RS06680;Dbxref=Genbank:WP_011257440.1;Name=WP_011257440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368087.1;locus_tag=LNP58_RS06680;product=ATP-binding protein;protein_id=WP_011257440.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1395621 1396663 . + . ID=gene-LNP58_RS06685;Name=LNP58_RS06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06685;old_locus_tag=LNP58_06680;pseudo=true NZ_CP086372.1 Protein Homology CDS 1395621 1396663 . + 0 ID=cds-LNP58_RS06685;Parent=gene-LNP58_RS06685;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS06685;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1396760 1396874 . - . ID=gene-LNP58_RS06690;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LNP58_RS06690;old_locus_tag=LNP58_06685 NZ_CP086372.1 cmsearch rRNA 1396760 1396874 . - . ID=rna-LNP58_RS06690;Parent=gene-LNP58_RS06690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06690;product=5S ribosomal RNA NZ_CP086372.1 cmsearch exon 1396760 1396874 . - . ID=exon-LNP58_RS06690-1;Parent=rna-LNP58_RS06690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06690;product=5S ribosomal RNA NZ_CP086372.1 RefSeq gene 1397048 1399930 . - . ID=gene-LNP58_RS06695;Name=LNP58_RS06695;gbkey=Gene;gene_biotype=rRNA;locus_tag=LNP58_RS06695;old_locus_tag=LNP58_06690 NZ_CP086372.1 cmsearch rRNA 1397048 1399930 . - . ID=rna-LNP58_RS06695;Parent=gene-LNP58_RS06695;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06695;product=23S ribosomal RNA NZ_CP086372.1 cmsearch exon 1397048 1399930 . - . ID=exon-LNP58_RS06695-1;Parent=rna-LNP58_RS06695;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06695;product=23S ribosomal RNA NZ_CP086372.1 RefSeq gene 1400158 1400234 . - . ID=gene-LNP58_RS06700;Name=LNP58_RS06700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS06700;old_locus_tag=LNP58_06695 NZ_CP086372.1 tRNAscan-SE tRNA 1400158 1400234 . - . ID=rna-LNP58_RS06700;Parent=gene-LNP58_RS06700;anticodon=(pos:complement(1400198..1400200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06700;product=tRNA-Ile NZ_CP086372.1 tRNAscan-SE exon 1400158 1400234 . - . ID=exon-LNP58_RS06700-1;Parent=rna-LNP58_RS06700;anticodon=(pos:complement(1400198..1400200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06700;product=tRNA-Ile NZ_CP086372.1 RefSeq gene 1400254 1400329 . - . ID=gene-LNP58_RS06705;Name=LNP58_RS06705;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS06705;old_locus_tag=LNP58_06700 NZ_CP086372.1 tRNAscan-SE tRNA 1400254 1400329 . - . ID=rna-LNP58_RS06705;Parent=gene-LNP58_RS06705;anticodon=(pos:complement(1400294..1400296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06705;product=tRNA-Ala NZ_CP086372.1 tRNAscan-SE exon 1400254 1400329 . - . ID=exon-LNP58_RS06705-1;Parent=rna-LNP58_RS06705;anticodon=(pos:complement(1400294..1400296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS06705;product=tRNA-Ala NZ_CP086372.1 RefSeq gene 1400423 1401969 . - . ID=gene-LNP58_RS06710;Name=LNP58_RS06710;gbkey=Gene;gene_biotype=rRNA;locus_tag=LNP58_RS06710;old_locus_tag=LNP58_06705 NZ_CP086372.1 cmsearch rRNA 1400423 1401969 . - . ID=rna-LNP58_RS06710;Parent=gene-LNP58_RS06710;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06710;product=16S ribosomal RNA NZ_CP086372.1 cmsearch exon 1400423 1401969 . - . ID=exon-LNP58_RS06710-1;Parent=rna-LNP58_RS06710;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06710;product=16S ribosomal RNA NZ_CP086372.1 RefSeq gene 1402693 1403904 . - . ID=gene-LNP58_RS06715;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LNP58_RS06715;old_locus_tag=LNP58_06710 NZ_CP086372.1 Protein Homology CDS 1402693 1403904 . - 0 ID=cds-WP_011407458.1;Parent=gene-LNP58_RS06715;Dbxref=Genbank:WP_011407458.1;Name=WP_011407458.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407458.1;locus_tag=LNP58_RS06715;product=tyrosine--tRNA ligase;protein_id=WP_011407458.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1404076 1405494 . + . ID=gene-LNP58_RS06720;Name=LNP58_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06720;old_locus_tag=LNP58_06715 NZ_CP086372.1 Protein Homology CDS 1404076 1405494 . + 0 ID=cds-WP_011257439.1;Parent=gene-LNP58_RS06720;Dbxref=Genbank:WP_011257439.1;Name=WP_011257439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115461.1;locus_tag=LNP58_RS06720;product=M23 family metallopeptidase;protein_id=WP_011257439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1405865 1406998 . + . ID=gene-LNP58_RS06725;Name=LNP58_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06725;old_locus_tag=LNP58_06720 NZ_CP086372.1 Protein Homology CDS 1405865 1406998 . + 0 ID=cds-WP_011257438.1;Parent=gene-LNP58_RS06725;Dbxref=Genbank:WP_011257438.1;Name=WP_011257438.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1;locus_tag=LNP58_RS06725;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_011257438.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1407036 1407263 . - . ID=gene-LNP58_RS06730;Name=LNP58_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06730;old_locus_tag=LNP58_06725 NZ_CP086372.1 Protein Homology CDS 1407036 1407263 . - 0 ID=cds-WP_011257437.1;Parent=gene-LNP58_RS06730;Dbxref=Genbank:WP_011257437.1;Name=WP_011257437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489057.1;locus_tag=LNP58_RS06730;product=hypothetical protein;protein_id=WP_011257437.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1407322 1408617 . - . ID=gene-LNP58_RS06735;Name=LNP58_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06735;old_locus_tag=LNP58_06730 NZ_CP086372.1 Protein Homology CDS 1407322 1408617 . - 0 ID=cds-WP_011257436.1;Parent=gene-LNP58_RS06735;Dbxref=Genbank:WP_011257436.1;Name=WP_011257436.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930858.1;locus_tag=LNP58_RS06735;product=MFS transporter;protein_id=WP_011257436.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1408937 1409020 . - . ID=gene-LNP58_RS06740;Name=LNP58_RS06740;end_range=1409020,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06740;old_locus_tag=LNP58_06735;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1408937 1409020 . - 0 ID=cds-LNP58_RS06740;Parent=gene-LNP58_RS06740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1409020,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930855.1;locus_tag=LNP58_RS06740;partial=true;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1409098 1409898 . - . ID=gene-LNP58_RS06745;Name=LNP58_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06745;old_locus_tag=LNP58_06740 NZ_CP086372.1 Protein Homology CDS 1409098 1409898 . - 0 ID=cds-WP_012446253.1;Parent=gene-LNP58_RS06745;Dbxref=Genbank:WP_012446253.1;Name=WP_012446253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930855.1;locus_tag=LNP58_RS06745;product=exodeoxyribonuclease III;protein_id=WP_012446253.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1410026 1410685 . + . ID=gene-LNP58_RS06750;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LNP58_RS06750;old_locus_tag=LNP58_06745 NZ_CP086372.1 Protein Homology CDS 1410026 1410685 . + 0 ID=cds-WP_011257434.1;Parent=gene-LNP58_RS06750;Dbxref=Genbank:WP_011257434.1;Name=WP_011257434.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1;locus_tag=LNP58_RS06750;product=orotate phosphoribosyltransferase;protein_id=WP_011257434.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1410708 1411388 . + . ID=gene-LNP58_RS06755;Name=LNP58_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06755;old_locus_tag=LNP58_06750 NZ_CP086372.1 Protein Homology CDS 1410708 1411388 . + 0 ID=cds-WP_178383654.1;Parent=gene-LNP58_RS06755;Dbxref=Genbank:WP_178383654.1;Name=WP_178383654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407455.1;locus_tag=LNP58_RS06755;product=hypothetical protein;protein_id=WP_178383654.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1411502 1412299 . + . ID=gene-LNP58_RS06760;Name=LNP58_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06760;old_locus_tag=LNP58_06755 NZ_CP086372.1 Protein Homology CDS 1411502 1412299 . + 0 ID=cds-WP_011257432.1;Parent=gene-LNP58_RS06760;Dbxref=Genbank:WP_011257432.1;Name=WP_011257432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914407.1;locus_tag=LNP58_RS06760;product=AAA family ATPase;protein_id=WP_011257432.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1412299 1413228 . + . ID=gene-LNP58_RS06765;Name=LNP58_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06765;old_locus_tag=LNP58_06760 NZ_CP086372.1 Protein Homology CDS 1412299 1413228 . + 0 ID=cds-WP_011257431.1;Parent=gene-LNP58_RS06765;Dbxref=Genbank:WP_011257431.1;Name=WP_011257431.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163137.1;locus_tag=LNP58_RS06765;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_011257431.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1413264 1413572 . + . ID=gene-LNP58_RS06770;Name=LNP58_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06770;old_locus_tag=LNP58_06765 NZ_CP086372.1 Protein Homology CDS 1413264 1413572 . + 0 ID=cds-WP_011407454.1;Parent=gene-LNP58_RS06770;Dbxref=Genbank:WP_011407454.1;Name=WP_011407454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300778.1;locus_tag=LNP58_RS06770;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011407454.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1413777 1414742 . + . ID=gene-LNP58_RS06775;Name=LNP58_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06775;old_locus_tag=LNP58_06770 NZ_CP086372.1 Protein Homology CDS 1413777 1414742 . + 0 ID=cds-WP_044757178.1;Parent=gene-LNP58_RS06775;Dbxref=Genbank:WP_044757178.1;Name=WP_044757178.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169566.1;locus_tag=LNP58_RS06775;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_044757178.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1415097 1415819 . + . ID=gene-LNP58_RS06780;Name=LNP58_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06780;old_locus_tag=LNP58_06775 NZ_CP086372.1 Protein Homology CDS 1415097 1415819 . + 0 ID=cds-WP_011407452.1;Parent=gene-LNP58_RS06780;Dbxref=Genbank:WP_011407452.1;Name=WP_011407452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038929.1;locus_tag=LNP58_RS06780;product=glycosyltransferase family 2 protein;protein_id=WP_011407452.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1415819 1416160 . + . ID=gene-LNP58_RS06785;Name=LNP58_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06785;old_locus_tag=LNP58_06780 NZ_CP086372.1 Protein Homology CDS 1415819 1416160 . + 0 ID=cds-WP_010374733.1;Parent=gene-LNP58_RS06785;Dbxref=Genbank:WP_010374733.1;Name=WP_010374733.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1;locus_tag=LNP58_RS06785;product=lipid-A-disaccharide synthase N-terminal domain-containing protein;protein_id=WP_010374733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1416584 1417126 . + . ID=gene-LNP58_RS06790;Name=LNP58_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06790;old_locus_tag=LNP58_06785 NZ_CP086372.1 Protein Homology CDS 1416584 1417126 . + 0 ID=cds-WP_171970783.1;Parent=gene-LNP58_RS06790;Dbxref=Genbank:WP_171970783.1;Name=WP_171970783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300782.1;locus_tag=LNP58_RS06790;product=hypothetical protein;protein_id=WP_171970783.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1417234 1419582 . - . ID=gene-LNP58_RS06795;Name=LNP58_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06795;old_locus_tag=LNP58_06790 NZ_CP086372.1 Protein Homology CDS 1417234 1419582 . - 0 ID=cds-WP_069960143.1;Parent=gene-LNP58_RS06795;Dbxref=Genbank:WP_069960143.1;Name=WP_069960143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161151.1;locus_tag=LNP58_RS06795;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_069960143.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1419596 1420063 . - . ID=gene-LNP58_RS06800;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LNP58_RS06800;old_locus_tag=LNP58_06795 NZ_CP086372.1 Protein Homology CDS 1419596 1420063 . - 0 ID=cds-WP_011407449.1;Parent=gene-LNP58_RS06800;Dbxref=Genbank:WP_011407449.1;Name=WP_011407449.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091285.1;locus_tag=LNP58_RS06800;product=dUTP diphosphatase;protein_id=WP_011407449.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1420060 1421334 . - . ID=gene-LNP58_RS06805;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LNP58_RS06805;old_locus_tag=LNP58_06800 NZ_CP086372.1 Protein Homology CDS 1420060 1421334 . - 0 ID=cds-WP_011257424.1;Parent=gene-LNP58_RS06805;Dbxref=Genbank:WP_011257424.1;Name=WP_011257424.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1;locus_tag=LNP58_RS06805;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_011257424.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1421395 1422108 . + . ID=gene-LNP58_RS06810;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LNP58_RS06810;old_locus_tag=LNP58_06805 NZ_CP086372.1 Protein Homology CDS 1421395 1422108 . + 0 ID=cds-WP_027703569.1;Parent=gene-LNP58_RS06810;Dbxref=Genbank:WP_027703569.1;Name=WP_027703569.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300786.1;locus_tag=LNP58_RS06810;product=DNA repair protein RadC;protein_id=WP_027703569.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1422196 1423884 . + . ID=gene-LNP58_RS06815;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LNP58_RS06815;old_locus_tag=LNP58_06810 NZ_CP086372.1 Protein Homology CDS 1422196 1423884 . + 0 ID=cds-WP_012446263.1;Parent=gene-LNP58_RS06815;Dbxref=Genbank:WP_012446263.1;Name=WP_012446263.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1;locus_tag=LNP58_RS06815;product=arginine--tRNA ligase;protein_id=WP_012446263.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1424064 1424945 . + . ID=gene-LNP58_RS06820;Name=LNP58_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06820;old_locus_tag=LNP58_06815 NZ_CP086372.1 Protein Homology CDS 1424064 1424945 . + 0 ID=cds-WP_011257421.1;Parent=gene-LNP58_RS06820;Dbxref=Genbank:WP_011257421.1;Name=WP_011257421.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091287.1;locus_tag=LNP58_RS06820;product=SPOR domain-containing protein;protein_id=WP_011257421.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1424952 1425416 . + . ID=gene-LNP58_RS06825;Name=LNP58_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06825;old_locus_tag=LNP58_06820 NZ_CP086372.1 Protein Homology CDS 1424952 1425416 . + 0 ID=cds-WP_011257420.1;Parent=gene-LNP58_RS06825;Dbxref=Genbank:WP_011257420.1;Name=WP_011257420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407444.1;locus_tag=LNP58_RS06825;product=hypothetical protein;protein_id=WP_011257420.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1425511 1426266 . + . ID=gene-LNP58_RS06830;Name=LNP58_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06830;old_locus_tag=LNP58_06825 NZ_CP086372.1 Protein Homology CDS 1425511 1426266 . + 0 ID=cds-WP_011407443.1;Parent=gene-LNP58_RS06830;Dbxref=Genbank:WP_011407443.1;Name=WP_011407443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1;locus_tag=LNP58_RS06830;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011407443.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1426558 1426992 . - . ID=gene-LNP58_RS06835;Name=LNP58_RS06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06835;old_locus_tag=LNP58_06830;partial=true;pseudo=true;start_range=.,1426558 NZ_CP086372.1 Protein Homology CDS 1426558 1426992 . - 0 ID=cds-LNP58_RS06835;Parent=gene-LNP58_RS06835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS06835;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1426558;transl_table=11 NZ_CP086372.1 RefSeq gene 1427234 1428094 . - . ID=gene-LNP58_RS06840;Name=LNP58_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06840;old_locus_tag=LNP58_06835 NZ_CP086372.1 Protein Homology CDS 1427234 1428094 . - 0 ID=cds-WP_011257417.1;Parent=gene-LNP58_RS06840;Dbxref=Genbank:WP_011257417.1;Name=WP_011257417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968468.1;locus_tag=LNP58_RS06840;product=serine protein kinase RIO;protein_id=WP_011257417.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1428242 1429103 . + . ID=gene-LNP58_RS06845;Name=LNP58_RS06845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06845;old_locus_tag=LNP58_06840;pseudo=true NZ_CP086372.1 Protein Homology CDS 1428242 1429103 . + 0 ID=cds-LNP58_RS06845;Parent=gene-LNP58_RS06845;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368966.1;locus_tag=LNP58_RS06845;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1429451 1430260 . - . ID=gene-LNP58_RS06850;Name=LNP58_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06850;old_locus_tag=LNP58_06845 NZ_CP086372.1 Protein Homology CDS 1429451 1430260 . - 0 ID=cds-WP_228329732.1;Parent=gene-LNP58_RS06850;Dbxref=Genbank:WP_228329732.1;Name=WP_228329732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089114.1;locus_tag=LNP58_RS06850;product=alpha/beta fold hydrolase;protein_id=WP_228329732.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1430561 1430974 . - . ID=gene-LNP58_RS06855;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LNP58_RS06855;old_locus_tag=LNP58_06850 NZ_CP086372.1 Protein Homology CDS 1430561 1430974 . - 0 ID=cds-WP_011407440.1;Parent=gene-LNP58_RS06855;Dbxref=Genbank:WP_011407440.1;Name=WP_011407440.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485683.1;locus_tag=LNP58_RS06855;product=4-carboxymuconolactone decarboxylase;protein_id=WP_011407440.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1431000 1431782 . - . ID=gene-LNP58_RS06860;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LNP58_RS06860;old_locus_tag=LNP58_06855 NZ_CP086372.1 Protein Homology CDS 1431000 1431782 . - 0 ID=cds-WP_011257413.1;Parent=gene-LNP58_RS06860;Dbxref=Genbank:WP_011257413.1;Name=WP_011257413.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118367.1;locus_tag=LNP58_RS06860;product=3-oxoadipate enol-lactonase;protein_id=WP_011257413.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1431793 1433145 . - . ID=gene-LNP58_RS06865;Name=LNP58_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06865;old_locus_tag=LNP58_06860 NZ_CP086372.1 Protein Homology CDS 1431793 1433145 . - 0 ID=cds-WP_044757184.1;Parent=gene-LNP58_RS06865;Dbxref=Genbank:WP_044757184.1;Name=WP_044757184.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113350.1;locus_tag=LNP58_RS06865;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_044757184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1433296 1433373 . - . ID=gene-LNP58_RS06870;Name=LNP58_RS06870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS06870;old_locus_tag=LNP58_06865 NZ_CP086372.1 cmsearch ncRNA 1433296 1433373 . - . ID=rna-LNP58_RS06870;Parent=gene-LNP58_RS06870;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06870;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1433296 1433373 . - . ID=exon-LNP58_RS06870-1;Parent=rna-LNP58_RS06870;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS06870;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1433646 1434188 . - . ID=gene-LNP58_RS06875;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LNP58_RS06875;old_locus_tag=LNP58_06870 NZ_CP086372.1 Protein Homology CDS 1433646 1434188 . - 0 ID=cds-WP_044757185.1;Parent=gene-LNP58_RS06875;Dbxref=Genbank:WP_044757185.1;Name=WP_044757185.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912759.1;locus_tag=LNP58_RS06875;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_044757185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1434193 1434930 . - . ID=gene-LNP58_RS06880;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=LNP58_RS06880;old_locus_tag=LNP58_06875 NZ_CP086372.1 Protein Homology CDS 1434193 1434930 . - 0 ID=cds-WP_044757187.1;Parent=gene-LNP58_RS06880;Dbxref=Genbank:WP_044757187.1;Name=WP_044757187.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118364.1;locus_tag=LNP58_RS06880;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_044757187.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1435009 1436217 . - . ID=gene-LNP58_RS06885;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LNP58_RS06885;old_locus_tag=LNP58_06880 NZ_CP086372.1 Protein Homology CDS 1435009 1436217 . - 0 ID=cds-WP_011257409.1;Parent=gene-LNP58_RS06885;Dbxref=Genbank:WP_011257409.1;Name=WP_011257409.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577959.1;locus_tag=LNP58_RS06885;product=3-oxoadipyl-CoA thiolase;protein_id=WP_011257409.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1436214 1436699 . - . ID=gene-LNP58_RS06890;Name=LNP58_RS06890;end_range=1436699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06890;old_locus_tag=LNP58_06885;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1436214 1436699 . - 0 ID=cds-LNP58_RS06890;Parent=gene-LNP58_RS06890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1436699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089108.1;locus_tag=LNP58_RS06890;partial=true;product=CoA-transferase subunit beta;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1436729 1437832 . - . ID=gene-LNP58_RS06895;Name=LNP58_RS06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS06895;old_locus_tag=LNP58_06890;pseudo=true NZ_CP086372.1 Protein Homology CDS 1436729 1437832 . - 0 ID=cds-LNP58_RS06895;Parent=gene-LNP58_RS06895;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS06895;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1438046 1438372 . - . ID=gene-LNP58_RS06900;Name=LNP58_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06900;old_locus_tag=LNP58_06895 NZ_CP086372.1 Protein Homology CDS 1438046 1438372 . - 0 ID=cds-WP_011257407.1;Parent=gene-LNP58_RS06900;Dbxref=Genbank:WP_011257407.1;Name=WP_011257407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156291.1;locus_tag=LNP58_RS06900;product=thioredoxin family protein;protein_id=WP_011257407.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1438344 1438838 . - . ID=gene-LNP58_RS06905;Name=LNP58_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06905;old_locus_tag=LNP58_06900 NZ_CP086372.1 Protein Homology CDS 1438344 1438838 . - 0 ID=cds-WP_011407435.1;Parent=gene-LNP58_RS06905;Dbxref=Genbank:WP_011407435.1;Name=WP_011407435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989848.1;locus_tag=LNP58_RS06905;product=flavodoxin;protein_id=WP_011407435.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1438852 1439625 . - . ID=gene-LNP58_RS06910;Name=LNP58_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06910;old_locus_tag=LNP58_06905 NZ_CP086372.1 Protein Homology CDS 1438852 1439625 . - 0 ID=cds-WP_229001924.1;Parent=gene-LNP58_RS06910;Dbxref=Genbank:WP_229001924.1;Name=WP_229001924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989846.1;locus_tag=LNP58_RS06910;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_229001924.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1439742 1440785 . - . ID=gene-LNP58_RS06915;Name=LNP58_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06915;old_locus_tag=LNP58_06910 NZ_CP086372.1 Protein Homology CDS 1439742 1440785 . - 0 ID=cds-WP_011257405.1;Parent=gene-LNP58_RS06915;Dbxref=Genbank:WP_011257405.1;Name=WP_011257405.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809721.1;locus_tag=LNP58_RS06915;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_011257405.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1440962 1443460 . - . ID=gene-LNP58_RS06920;Name=LNP58_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06920;old_locus_tag=LNP58_06915 NZ_CP086372.1 Protein Homology CDS 1440962 1443460 . - 0 ID=cds-WP_011257404.1;Parent=gene-LNP58_RS06920;Dbxref=Genbank:WP_011257404.1;Name=WP_011257404.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501652.1;locus_tag=LNP58_RS06920;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_011257404.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1444015 1445058 . - . ID=gene-LNP58_RS06925;Name=LNP58_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06925;old_locus_tag=LNP58_06920 NZ_CP086372.1 Protein Homology CDS 1444015 1445058 . - 0 ID=cds-WP_011407433.1;Parent=gene-LNP58_RS06925;Dbxref=Genbank:WP_011407433.1;Name=WP_011407433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487316.1;locus_tag=LNP58_RS06925;product=DUF475 domain-containing protein;protein_id=WP_011407433.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1445165 1447873 . - . ID=gene-LNP58_RS06930;Name=LNP58_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06930;old_locus_tag=LNP58_06925 NZ_CP086372.1 Protein Homology CDS 1445165 1447873 . - 0 ID=cds-WP_069959704.1;Parent=gene-LNP58_RS06930;Dbxref=Genbank:WP_069959704.1;Name=WP_069959704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506173.1;locus_tag=LNP58_RS06930;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_069959704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1448160 1448774 . - . ID=gene-LNP58_RS06935;Name=LNP58_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06935;old_locus_tag=LNP58_06930 NZ_CP086372.1 Protein Homology CDS 1448160 1448774 . - 0 ID=cds-WP_069959703.1;Parent=gene-LNP58_RS06935;Dbxref=Genbank:WP_069959703.1;Name=WP_069959703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116272.1;locus_tag=LNP58_RS06935;product=hypothetical protein;protein_id=WP_069959703.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1448846 1450213 . - . ID=gene-LNP58_RS06940;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LNP58_RS06940;old_locus_tag=LNP58_06935 NZ_CP086372.1 Protein Homology CDS 1448846 1450213 . - 0 ID=cds-WP_011257400.1;Parent=gene-LNP58_RS06940;Dbxref=Genbank:WP_011257400.1;Name=WP_011257400.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174334.1;locus_tag=LNP58_RS06940;product=magnesium transporter;protein_id=WP_011257400.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1450903 1452720 . + . ID=gene-LNP58_RS06945;Name=LNP58_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06945;old_locus_tag=LNP58_06940 NZ_CP086372.1 Protein Homology CDS 1450903 1452720 . + 0 ID=cds-WP_069959702.1;Parent=gene-LNP58_RS06945;Dbxref=Genbank:WP_069959702.1;Name=WP_069959702.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257399.1;locus_tag=LNP58_RS06945;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_069959702.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1452820 1454139 . - . ID=gene-LNP58_RS06950;Name=LNP58_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06950;old_locus_tag=LNP58_06945 NZ_CP086372.1 Protein Homology CDS 1452820 1454139 . - 0 ID=cds-WP_117231491.1;Parent=gene-LNP58_RS06950;Dbxref=Genbank:WP_117231491.1;Name=WP_117231491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS06950;product=IS701-like element ISXo15 family transposase;protein_id=WP_117231491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1454620 1456416 . - . ID=gene-LNP58_RS06955;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LNP58_RS06955;old_locus_tag=LNP58_06950 NZ_CP086372.1 Protein Homology CDS 1454620 1456416 . - 0 ID=cds-WP_011407429.1;Parent=gene-LNP58_RS06955;Dbxref=Genbank:WP_011407429.1;Name=WP_011407429.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501642.1;locus_tag=LNP58_RS06955;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011407429.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1456413 1458212 . - . ID=gene-LNP58_RS06960;Name=LNP58_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06960;old_locus_tag=LNP58_06955 NZ_CP086372.1 Protein Homology CDS 1456413 1458212 . - 0 ID=cds-WP_012446285.1;Parent=gene-LNP58_RS06960;Dbxref=Genbank:WP_012446285.1;Name=WP_012446285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158573.1;locus_tag=LNP58_RS06960;product=glycoside hydrolase family 15 protein;protein_id=WP_012446285.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1458276 1458605 . - . ID=gene-LNP58_RS06965;Name=LNP58_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06965;old_locus_tag=LNP58_06960 NZ_CP086372.1 Protein Homology CDS 1458276 1458605 . - 0 ID=cds-WP_041181939.1;Parent=gene-LNP58_RS06965;Dbxref=Genbank:WP_041181939.1;Name=WP_041181939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052720.1;locus_tag=LNP58_RS06965;product=phosphotyrosine protein phosphatase;protein_id=WP_041181939.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1458632 1461952 . - . ID=gene-LNP58_RS06970;Name=LNP58_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06970;old_locus_tag=LNP58_06965 NZ_CP086372.1 Protein Homology CDS 1458632 1461952 . - 0 ID=cds-WP_069959701.1;Parent=gene-LNP58_RS06970;Dbxref=Genbank:WP_069959701.1;Name=WP_069959701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471441.1;locus_tag=LNP58_RS06970;product=ankyrin repeat domain-containing protein;protein_id=WP_069959701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1461945 1462205 . - . ID=gene-LNP58_RS06975;Name=LNP58_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06975;old_locus_tag=LNP58_06970 NZ_CP086372.1 Protein Homology CDS 1461945 1462205 . - 0 ID=cds-WP_011407425.1;Parent=gene-LNP58_RS06975;Dbxref=Genbank:WP_011407425.1;Name=WP_011407425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156303.1;locus_tag=LNP58_RS06975;product=YcgL domain-containing protein;protein_id=WP_011407425.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1462424 1463623 . + . ID=gene-LNP58_RS06980;Name=LNP58_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06980;old_locus_tag=LNP58_06975 NZ_CP086372.1 Protein Homology CDS 1462424 1463623 . + 0 ID=cds-WP_011407424.1;Parent=gene-LNP58_RS06980;Dbxref=Genbank:WP_011407424.1;Name=WP_011407424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117713.1;locus_tag=LNP58_RS06980;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_011407424.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1463623 1464396 . + . ID=gene-LNP58_RS06985;Name=LNP58_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06985;old_locus_tag=LNP58_06980 NZ_CP086372.1 Protein Homology CDS 1463623 1464396 . + 0 ID=cds-WP_011257393.1;Parent=gene-LNP58_RS06985;Dbxref=Genbank:WP_011257393.1;Name=WP_011257393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=LNP58_RS06985;product=beta-ketoacyl synthase chain length factor;protein_id=WP_011257393.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1464393 1465214 . + . ID=gene-LNP58_RS06990;Name=LNP58_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06990;old_locus_tag=LNP58_06985 NZ_CP086372.1 Protein Homology CDS 1464393 1465214 . + 0 ID=cds-WP_011257392.1;Parent=gene-LNP58_RS06990;Dbxref=Genbank:WP_011257392.1;Name=WP_011257392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369782.1;locus_tag=LNP58_RS06990;product=glycosyltransferase family 2 protein;protein_id=WP_011257392.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1465211 1466833 . + . ID=gene-LNP58_RS06995;Name=LNP58_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS06995;old_locus_tag=LNP58_06990 NZ_CP086372.1 Protein Homology CDS 1465211 1466833 . + 0 ID=cds-WP_012446289.1;Parent=gene-LNP58_RS06995;Dbxref=Genbank:WP_012446289.1;Name=WP_012446289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972221.1;locus_tag=LNP58_RS06995;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_012446289.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1466923 1467258 . + . ID=gene-LNP58_RS07000;Name=LNP58_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07000;old_locus_tag=LNP58_06995 NZ_CP086372.1 Protein Homology CDS 1466923 1467258 . + 0 ID=cds-WP_011407422.1;Parent=gene-LNP58_RS07000;Dbxref=Genbank:WP_011407422.1;Name=WP_011407422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116619.1;locus_tag=LNP58_RS07000;product=hypothetical protein;protein_id=WP_011407422.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1467362 1468099 . - . ID=gene-LNP58_RS07005;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LNP58_RS07005;old_locus_tag=LNP58_07000 NZ_CP086372.1 Protein Homology CDS 1467362 1468099 . - 0 ID=cds-WP_027704265.1;Parent=gene-LNP58_RS07005;Dbxref=Genbank:WP_027704265.1;Name=WP_027704265.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506159.1;locus_tag=LNP58_RS07005;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_027704265.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1468278 1469337 . - . ID=gene-LNP58_RS07010;Name=LNP58_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07010;old_locus_tag=LNP58_07005 NZ_CP086372.1 Protein Homology CDS 1468447 1469337 . - 0 ID=cds-WP_113336210.1;Parent=gene-LNP58_RS07010;Dbxref=Genbank:WP_113336210.1;Name=WP_113336210.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS07010;product=IS630 family transposase;protein_id=WP_113336210.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1468278 1468445 . - 0 ID=cds-WP_113336210.1;Parent=gene-LNP58_RS07010;Dbxref=Genbank:WP_113336210.1;Name=WP_113336210.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS07010;product=IS630 family transposase;protein_id=WP_113336210.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1469762 1471135 . - . ID=gene-LNP58_RS07015;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LNP58_RS07015;old_locus_tag=LNP58_07010 NZ_CP086372.1 Protein Homology CDS 1469762 1471135 . - 0 ID=cds-WP_027704113.1;Parent=gene-LNP58_RS07015;Dbxref=Genbank:WP_027704113.1;Name=WP_027704113.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158481.1;locus_tag=LNP58_RS07015;product=8-amino-7-oxononanoate synthase;protein_id=WP_027704113.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1471059 1472093 . - . ID=gene-LNP58_RS07020;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LNP58_RS07020;old_locus_tag=LNP58_07015 NZ_CP086372.1 Protein Homology CDS 1471059 1472093 . - 0 ID=cds-WP_011257387.1;Parent=gene-LNP58_RS07020;Dbxref=Genbank:WP_011257387.1;Name=WP_011257387.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368929.1;locus_tag=LNP58_RS07020;product=biotin synthase BioB;protein_id=WP_011257387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1472143 1472868 . + . ID=gene-LNP58_RS07025;Name=LNP58_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07025;old_locus_tag=LNP58_07020 NZ_CP086372.1 Protein Homology CDS 1472143 1472868 . + 0 ID=cds-WP_042465430.1;Parent=gene-LNP58_RS07025;Dbxref=Genbank:WP_042465430.1;Name=WP_042465430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115760.1;locus_tag=LNP58_RS07025;product=ComF family protein;protein_id=WP_042465430.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1473124 1474023 . - . ID=gene-LNP58_RS07030;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LNP58_RS07030;old_locus_tag=LNP58_07025 NZ_CP086372.1 Protein Homology CDS 1473124 1474023 . - 0 ID=cds-WP_011257385.1;Parent=gene-LNP58_RS07030;Dbxref=Genbank:WP_011257385.1;Name=WP_011257385.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050286.1;locus_tag=LNP58_RS07030;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_011257385.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1474478 1474554 . + . ID=gene-LNP58_RS07035;Name=LNP58_RS07035;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS07035;old_locus_tag=LNP58_07030 NZ_CP086372.1 tRNAscan-SE tRNA 1474478 1474554 . + . ID=rna-LNP58_RS07035;Parent=gene-LNP58_RS07035;anticodon=(pos:1474512..1474514);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07035;product=tRNA-Arg NZ_CP086372.1 tRNAscan-SE exon 1474478 1474554 . + . ID=exon-LNP58_RS07035-1;Parent=rna-LNP58_RS07035;anticodon=(pos:1474512..1474514);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07035;product=tRNA-Arg NZ_CP086372.1 RefSeq gene 1475159 1476265 . + . ID=gene-LNP58_RS07040;Name=LNP58_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07040;old_locus_tag=LNP58_07035 NZ_CP086372.1 Protein Homology CDS 1475159 1476265 . + 0 ID=cds-WP_011407418.1;Parent=gene-LNP58_RS07040;Dbxref=Genbank:WP_011407418.1;Name=WP_011407418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809543.1;locus_tag=LNP58_RS07040;product=AI-2E family transporter;protein_id=WP_011407418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1476397 1477134 . + . ID=gene-LNP58_RS07045;Name=LNP58_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07045;old_locus_tag=LNP58_07040 NZ_CP086372.1 Protein Homology CDS 1476397 1477134 . + 0 ID=cds-WP_011257383.1;Parent=gene-LNP58_RS07045;Dbxref=Genbank:WP_011257383.1;Name=WP_011257383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257383.1;locus_tag=LNP58_RS07045;product=HAD family hydrolase;protein_id=WP_011257383.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1477175 1478545 . + . ID=gene-LNP58_RS07050;Name=LNP58_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07050;old_locus_tag=LNP58_07045 NZ_CP086372.1 Protein Homology CDS 1477175 1478545 . + 0 ID=cds-WP_011257382.1;Parent=gene-LNP58_RS07050;Dbxref=Genbank:WP_011257382.1;Name=WP_011257382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989294.1;locus_tag=LNP58_RS07050;product=leucyl aminopeptidase family protein;protein_id=WP_011257382.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1478599 1479351 . - . ID=gene-LNP58_RS07055;Name=LNP58_RS07055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07055;old_locus_tag=LNP58_07050;pseudo=true NZ_CP086372.1 Protein Homology CDS 1478599 1479351 . - 0 ID=cds-LNP58_RS07055;Parent=gene-LNP58_RS07055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914350.1;locus_tag=LNP58_RS07055;product=anti-sigma factor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1479348 1479863 . - . ID=gene-LNP58_RS07060;Name=LNP58_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07060;old_locus_tag=LNP58_07055 NZ_CP086372.1 Protein Homology CDS 1479348 1479863 . - 0 ID=cds-WP_011257380.1;Parent=gene-LNP58_RS07060;Dbxref=Genbank:WP_011257380.1;Name=WP_011257380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446300.1;locus_tag=LNP58_RS07060;product=RNA polymerase sigma factor;protein_id=WP_011257380.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1480028 1481119 . + . ID=gene-LNP58_RS07065;Name=LNP58_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07065;old_locus_tag=LNP58_07060 NZ_CP086372.1 Protein Homology CDS 1480028 1481119 . + 0 ID=cds-WP_011257379.1;Parent=gene-LNP58_RS07065;Dbxref=Genbank:WP_011257379.1;Name=WP_011257379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914346.1;locus_tag=LNP58_RS07065;product=catalase family peroxidase;protein_id=WP_011257379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1481116 1481649 . + . ID=gene-LNP58_RS07070;Name=LNP58_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07070;old_locus_tag=LNP58_07065 NZ_CP086372.1 Protein Homology CDS 1481116 1481649 . + 0 ID=cds-WP_011257378.1;Parent=gene-LNP58_RS07070;Dbxref=Genbank:WP_011257378.1;Name=WP_011257378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305394.1;locus_tag=LNP58_RS07070;product=cytochrome b;protein_id=WP_011257378.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1481824 1482123 . + . ID=gene-LNP58_RS07075;Name=LNP58_RS07075;end_range=1482123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07075;old_locus_tag=LNP58_07070;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1481824 1482123 . + 0 ID=cds-LNP58_RS07075;Parent=gene-LNP58_RS07075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1482123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS07075;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1482350 1483465 . + . ID=gene-LNP58_RS07080;Name=LNP58_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07080;old_locus_tag=LNP58_07075 NZ_CP086372.1 Protein Homology CDS 1482350 1483465 . + 0 ID=cds-WP_011407417.1;Parent=gene-LNP58_RS07080;Dbxref=Genbank:WP_011407417.1;Name=WP_011407417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158228.1;locus_tag=LNP58_RS07080;product=alpha/beta hydrolase;protein_id=WP_011407417.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1483545 1484453 . - . ID=gene-LNP58_RS07085;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LNP58_RS07085;old_locus_tag=LNP58_07080 NZ_CP086372.1 Protein Homology CDS 1483545 1484453 . - 0 ID=cds-WP_011257375.1;Parent=gene-LNP58_RS07085;Dbxref=Genbank:WP_011257375.1;Name=WP_011257375.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850770.1;locus_tag=LNP58_RS07085;product=EamA family transporter RarD;protein_id=WP_011257375.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1484450 1485372 . - . ID=gene-LNP58_RS07090;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=LNP58_RS07090;old_locus_tag=LNP58_07085;pseudo=true NZ_CP086372.1 Protein Homology CDS 1484450 1485372 . - 0 ID=cds-LNP58_RS07090;Parent=gene-LNP58_RS07090;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158230.1;locus_tag=LNP58_RS07090;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1485417 1485869 . + . ID=gene-LNP58_RS07095;Name=LNP58_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07095;old_locus_tag=LNP58_07090 NZ_CP086372.1 Protein Homology CDS 1485417 1485869 . + 0 ID=cds-WP_069959697.1;Parent=gene-LNP58_RS07095;Dbxref=Genbank:WP_069959697.1;Name=WP_069959697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304468.1;locus_tag=LNP58_RS07095;product=Rap1a/Tai family immunity protein;protein_id=WP_069959697.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1486289 1486365 . + . ID=gene-LNP58_RS07100;Name=LNP58_RS07100;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07100;old_locus_tag=LNP58_07095 NZ_CP086372.1 cmsearch ncRNA 1486289 1486365 . + . ID=rna-LNP58_RS07100;Parent=gene-LNP58_RS07100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07100;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1486289 1486365 . + . ID=exon-LNP58_RS07100-1;Parent=rna-LNP58_RS07100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07100;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1486370 1488022 . - . ID=gene-LNP58_RS07105;Name=LNP58_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07105;old_locus_tag=LNP58_07100 NZ_CP086372.1 Protein Homology CDS 1486370 1488022 . - 0 ID=cds-WP_027704117.1;Parent=gene-LNP58_RS07105;Dbxref=Genbank:WP_027704117.1;Name=WP_027704117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486594.1;locus_tag=LNP58_RS07105;product=M28 family metallopeptidase;protein_id=WP_027704117.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1488485 1489429 . - . ID=gene-LNP58_RS07110;Name=LNP58_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07110;old_locus_tag=LNP58_07105 NZ_CP086372.1 Protein Homology CDS 1488485 1489429 . - 0 ID=cds-WP_027704118.1;Parent=gene-LNP58_RS07110;Dbxref=Genbank:WP_027704118.1;Name=WP_027704118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505028.1;locus_tag=LNP58_RS07110;product=MBL fold metallo-hydrolase;protein_id=WP_027704118.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1489560 1490849 . - . ID=gene-LNP58_RS07115;Name=LNP58_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07115;old_locus_tag=LNP58_07110 NZ_CP086372.1 Protein Homology CDS 1489560 1490849 . - 0 ID=cds-WP_075242213.1;Parent=gene-LNP58_RS07115;Dbxref=Genbank:WP_075242213.1;Name=WP_075242213.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966942.1;locus_tag=LNP58_RS07115;product=tryptophan--tRNA ligase;protein_id=WP_075242213.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1491018 1491227 . - . ID=gene-LNP58_RS07120;Name=LNP58_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07120;old_locus_tag=LNP58_07115 NZ_CP086372.1 Protein Homology CDS 1491018 1491227 . - 0 ID=cds-WP_011407411.1;Parent=gene-LNP58_RS07120;Dbxref=Genbank:WP_011407411.1;Name=WP_011407411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486601.1;locus_tag=LNP58_RS07120;product=CsbD family protein;protein_id=WP_011407411.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1491468 1491602 . - . ID=gene-LNP58_RS07125;Name=LNP58_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07125;old_locus_tag=LNP58_07120 NZ_CP086372.1 Protein Homology CDS 1491468 1491602 . - 0 ID=cds-WP_011257368.1;Parent=gene-LNP58_RS07125;Dbxref=Genbank:WP_011257368.1;Name=WP_011257368.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904515.1;locus_tag=LNP58_RS07125;product=entericidin A/B family lipoprotein;protein_id=WP_011257368.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1491666 1491818 . - . ID=gene-LNP58_RS07130;Name=LNP58_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07130;old_locus_tag=LNP58_07125 NZ_CP086372.1 Protein Homology CDS 1491666 1491818 . - 0 ID=cds-WP_011407410.1;Parent=gene-LNP58_RS07130;Dbxref=Genbank:WP_011407410.1;Name=WP_011407410.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374875.1;locus_tag=LNP58_RS07130;product=entericidin A/B family lipoprotein;protein_id=WP_011407410.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1491926 1492849 . - . ID=gene-LNP58_RS07135;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=LNP58_RS07135;old_locus_tag=LNP58_07130 NZ_CP086372.1 Protein Homology CDS 1491926 1492849 . - 0 ID=cds-WP_011407409.1;Parent=gene-LNP58_RS07135;Dbxref=Genbank:WP_011407409.1;Name=WP_011407409.1;Ontology_term=GO:0019547,GO:0004053;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA;go_process=arginine catabolic process to ornithine|0019547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989327.1;locus_tag=LNP58_RS07135;product=arginase;protein_id=WP_011407409.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1493171 1493389 . + . ID=gene-LNP58_RS07140;Name=LNP58_RS07140;end_range=1493389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07140;old_locus_tag=LNP58_07135;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1493171 1493389 . + 0 ID=cds-LNP58_RS07140;Parent=gene-LNP58_RS07140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1493389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158238.1;locus_tag=LNP58_RS07140;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1493381 1493836 . + . ID=gene-LNP58_RS07145;Name=LNP58_RS07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07145;old_locus_tag=LNP58_07140;partial=true;pseudo=true;start_range=.,1493381 NZ_CP086372.1 Protein Homology CDS 1493381 1493836 . + 0 ID=cds-LNP58_RS07145;Parent=gene-LNP58_RS07145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374883.1;locus_tag=LNP58_RS07145;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1493381;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1493833 1494375 . + . ID=gene-LNP58_RS07150;Name=LNP58_RS07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07150;old_locus_tag=LNP58_07145;pseudo=true NZ_CP086372.1 Protein Homology CDS 1493833 1494375 . + 0 ID=cds-LNP58_RS07150;Parent=gene-LNP58_RS07150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159094.1;locus_tag=LNP58_RS07150;product=GTPase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1494855 1495538 . + . ID=gene-LNP58_RS07155;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LNP58_RS07155;old_locus_tag=LNP58_07150 NZ_CP086372.1 Protein Homology CDS 1494855 1495538 . + 0 ID=cds-WP_011257363.1;Parent=gene-LNP58_RS07155;Dbxref=Genbank:WP_011257363.1;Name=WP_011257363.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486617.1;locus_tag=LNP58_RS07155;product=dTMP kinase;protein_id=WP_011257363.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1496239 1496314 . - . ID=gene-LNP58_RS07160;Name=LNP58_RS07160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS07160;old_locus_tag=LNP58_07155 NZ_CP086372.1 tRNAscan-SE tRNA 1496239 1496314 . - . ID=rna-LNP58_RS07160;Parent=gene-LNP58_RS07160;anticodon=(pos:complement(1496279..1496281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07160;product=tRNA-Thr NZ_CP086372.1 tRNAscan-SE exon 1496239 1496314 . - . ID=exon-LNP58_RS07160-1;Parent=rna-LNP58_RS07160;anticodon=(pos:complement(1496279..1496281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07160;product=tRNA-Thr NZ_CP086372.1 RefSeq gene 1496347 1497267 . - . ID=gene-LNP58_RS07165;Name=LNP58_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07165;old_locus_tag=LNP58_07160 NZ_CP086372.1 Protein Homology CDS 1496347 1497267 . - 0 ID=cds-WP_011407408.1;Parent=gene-LNP58_RS07165;Dbxref=Genbank:WP_011407408.1;Name=WP_011407408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112291.1;locus_tag=LNP58_RS07165;product=SPOR domain-containing protein;protein_id=WP_011407408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1497277 1498005 . - . ID=gene-LNP58_RS07170;Name=LNP58_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07170;old_locus_tag=LNP58_07165 NZ_CP086372.1 Protein Homology CDS 1497277 1498005 . - 0 ID=cds-WP_011257361.1;Parent=gene-LNP58_RS07170;Dbxref=Genbank:WP_011257361.1;Name=WP_011257361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154906.1;locus_tag=LNP58_RS07170;product=type III pantothenate kinase;protein_id=WP_011257361.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1498002 1499018 . - . ID=gene-LNP58_RS07175;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LNP58_RS07175;old_locus_tag=LNP58_07170 NZ_CP086372.1 Protein Homology CDS 1498002 1499018 . - 0 ID=cds-WP_012446310.1;Parent=gene-LNP58_RS07175;Dbxref=Genbank:WP_012446310.1;Name=WP_012446310.1;Ontology_term=GO:0006355,GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505037.1;locus_tag=LNP58_RS07175;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_012446310.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1499325 1499636 . + . ID=gene-LNP58_RS07180;Name=LNP58_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07180;old_locus_tag=LNP58_07175 NZ_CP086372.1 Protein Homology CDS 1499325 1499636 . + 0 ID=cds-WP_012446311.1;Parent=gene-LNP58_RS07180;Dbxref=Genbank:WP_012446311.1;Name=WP_012446311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154908.1;locus_tag=LNP58_RS07180;product=hypothetical protein;protein_id=WP_012446311.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1499657 1500400 . + . ID=gene-LNP58_RS07185;Name=LNP58_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07185;old_locus_tag=LNP58_07180 NZ_CP086372.1 Protein Homology CDS 1499657 1500400 . + 0 ID=cds-WP_075239894.1;Parent=gene-LNP58_RS07185;Dbxref=Genbank:WP_075239894.1;Name=WP_075239894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576450.1;locus_tag=LNP58_RS07185;product=zinc-dependent peptidase;protein_id=WP_075239894.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1500553 1501737 . - . ID=gene-LNP58_RS07190;Name=LNP58_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07190;old_locus_tag=LNP58_07185 NZ_CP086372.1 Protein Homology CDS 1500553 1501737 . - 0 ID=cds-WP_027704119.1;Parent=gene-LNP58_RS07190;Dbxref=Genbank:WP_027704119.1;Name=WP_027704119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304202.1;locus_tag=LNP58_RS07190;product=DUF1501 domain-containing protein;protein_id=WP_027704119.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1501857 1503446 . - . ID=gene-LNP58_RS07195;Name=LNP58_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07195;old_locus_tag=LNP58_07190 NZ_CP086372.1 Protein Homology CDS 1501857 1503446 . - 0 ID=cds-WP_012446313.1;Parent=gene-LNP58_RS07195;Dbxref=Genbank:WP_012446313.1;Name=WP_012446313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154911.1;locus_tag=LNP58_RS07195;product=DUF1800 domain-containing protein;protein_id=WP_012446313.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1503567 1504937 . - . ID=gene-LNP58_RS07200;Name=LNP58_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07200;old_locus_tag=LNP58_07195 NZ_CP086372.1 Protein Homology CDS 1503567 1504937 . - 0 ID=cds-WP_012446314.1;Parent=gene-LNP58_RS07200;Dbxref=Genbank:WP_012446314.1;Name=WP_012446314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171995.1;locus_tag=LNP58_RS07200;product=ATP-binding protein;protein_id=WP_012446314.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1505012 1505695 . - . ID=gene-LNP58_RS07205;Name=LNP58_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07205;old_locus_tag=LNP58_07200 NZ_CP086372.1 Protein Homology CDS 1505012 1505695 . - 0 ID=cds-WP_002808458.1;Parent=gene-LNP58_RS07205;Dbxref=Genbank:WP_002808458.1;Name=WP_002808458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1;locus_tag=LNP58_RS07205;product=response regulator transcription factor;protein_id=WP_002808458.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1505767 1506069 . - . ID=gene-LNP58_RS07210;Name=LNP58_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07210;old_locus_tag=LNP58_07205 NZ_CP086372.1 Protein Homology CDS 1505767 1506069 . - 0 ID=cds-WP_033013584.1;Parent=gene-LNP58_RS07210;Dbxref=Genbank:WP_033013584.1;Name=WP_033013584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446315.1;locus_tag=LNP58_RS07210;product=hypothetical protein;protein_id=WP_033013584.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1506406 1507410 . - . ID=gene-LNP58_RS07215;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LNP58_RS07215;old_locus_tag=LNP58_07210 NZ_CP086372.1 Protein Homology CDS 1506406 1507410 . - 0 ID=cds-WP_011257354.1;Parent=gene-LNP58_RS07215;Dbxref=Genbank:WP_011257354.1;Name=WP_011257354.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916500.1;locus_tag=LNP58_RS07215;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_011257354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1507873 1508097 . - . ID=gene-LNP58_RS07220;Name=LNP58_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07220;old_locus_tag=LNP58_07215 NZ_CP086372.1 Protein Homology CDS 1507873 1508097 . - 0 ID=cds-WP_012446316.1;Parent=gene-LNP58_RS07220;Dbxref=Genbank:WP_012446316.1;Name=WP_012446316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154914.1;locus_tag=LNP58_RS07220;product=hypothetical protein;protein_id=WP_012446316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1508348 1508533 . + . ID=gene-LNP58_RS07225;Name=LNP58_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07225;old_locus_tag=LNP58_07220 NZ_CP086372.1 GeneMarkS-2+ CDS 1508348 1508533 . + 0 ID=cds-WP_113160272.1;Parent=gene-LNP58_RS07225;Dbxref=Genbank:WP_113160272.1;Name=WP_113160272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS07225;product=hypothetical protein;protein_id=WP_113160272.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1508818 1509393 . - . ID=gene-LNP58_RS07230;Name=LNP58_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07230;old_locus_tag=LNP58_07225 NZ_CP086372.1 Protein Homology CDS 1508818 1509393 . - 0 ID=cds-WP_011257351.1;Parent=gene-LNP58_RS07230;Dbxref=Genbank:WP_011257351.1;Name=WP_011257351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374921.1;locus_tag=LNP58_RS07230;product=ankyrin repeat domain-containing protein;protein_id=WP_011257351.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1509452 1510957 . - . ID=gene-LNP58_RS07235;Name=katB;gbkey=Gene;gene=katB;gene_biotype=protein_coding;locus_tag=LNP58_RS07235;old_locus_tag=LNP58_07230 NZ_CP086372.1 Protein Homology CDS 1509452 1510957 . - 0 ID=cds-WP_027704120.1;Parent=gene-LNP58_RS07235;Dbxref=Genbank:WP_027704120.1;Name=WP_027704120.1;gbkey=CDS;gene=katB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902786.1;locus_tag=LNP58_RS07235;product=catalase KatB;protein_id=WP_027704120.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1511538 1511759 . - . ID=gene-LNP58_RS23410;Name=LNP58_RS23410;end_range=1511759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23410;partial=true;pseudo=true;start_range=.,1511538 NZ_CP086372.1 Protein Homology CDS 1511538 1511759 . - 0 ID=cds-LNP58_RS23410;Parent=gene-LNP58_RS23410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1511759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154917.1;locus_tag=LNP58_RS23410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1511538;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1511768 1511863 . - . ID=gene-LNP58_RS23415;Name=LNP58_RS23415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23415;partial=true;pseudo=true;start_range=.,1511768 NZ_CP086372.1 Protein Homology CDS 1511768 1511863 . - 0 ID=cds-LNP58_RS23415;Parent=gene-LNP58_RS23415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.2;locus_tag=LNP58_RS23415;partial=true;product=hemolysin D;pseudo=true;start_range=.,1511768;transl_table=11 NZ_CP086372.1 RefSeq gene 1512299 1513264 . - . ID=gene-LNP58_RS07245;Name=LNP58_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07245;old_locus_tag=LNP58_07240 NZ_CP086372.1 Protein Homology CDS 1512299 1513264 . - 0 ID=cds-WP_109182029.1;Parent=gene-LNP58_RS07245;Dbxref=Genbank:WP_109182029.1;Name=WP_109182029.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS07245;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182029.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1513347 1513679 . - . ID=gene-LNP58_RS07250;Name=LNP58_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07250;old_locus_tag=LNP58_07245 NZ_CP086372.1 Protein Homology CDS 1513347 1513679 . - 0 ID=cds-WP_011257346.1;Parent=gene-LNP58_RS07250;Dbxref=Genbank:WP_011257346.1;Name=WP_011257346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407399.1;locus_tag=LNP58_RS07250;product=hypothetical protein;protein_id=WP_011257346.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1513887 1516019 . - . ID=gene-LNP58_RS07255;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=LNP58_RS07255;old_locus_tag=LNP58_07250 NZ_CP086372.1 Protein Homology CDS 1513887 1516019 . - 0 ID=cds-WP_011257345.1;Parent=gene-LNP58_RS07255;Dbxref=Genbank:WP_011257345.1;Name=WP_011257345.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505052.1;locus_tag=LNP58_RS07255;product=ATP-dependent DNA helicase DinG;protein_id=WP_011257345.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1516297 1516505 . - . ID=gene-LNP58_RS07260;Name=LNP58_RS07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07260;old_locus_tag=LNP58_07255;pseudo=true NZ_CP086372.1 Protein Homology CDS 1516297 1516505 . - 0 ID=cds-LNP58_RS07260;Parent=gene-LNP58_RS07260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156258.1;locus_tag=LNP58_RS07260;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1516481 1516879 . - . ID=gene-LNP58_RS07265;Name=LNP58_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07265;old_locus_tag=LNP58_07260 NZ_CP086372.1 Protein Homology CDS 1516481 1516879 . - 0 ID=cds-WP_011257343.1;Parent=gene-LNP58_RS07265;Dbxref=Genbank:WP_011257343.1;Name=WP_011257343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505055.1;locus_tag=LNP58_RS07265;product=hypothetical protein;protein_id=WP_011257343.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1516869 1517720 . - . ID=gene-LNP58_RS07270;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LNP58_RS07270;old_locus_tag=LNP58_07265 NZ_CP086372.1 Protein Homology CDS 1516869 1517720 . - 0 ID=cds-WP_011257342.1;Parent=gene-LNP58_RS07270;Dbxref=Genbank:WP_011257342.1;Name=WP_011257342.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257342.1;locus_tag=LNP58_RS07270;product=shikimate dehydrogenase;protein_id=WP_011257342.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1517773 1518654 . + . ID=gene-LNP58_RS07275;Name=LNP58_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07275;old_locus_tag=LNP58_07270 NZ_CP086372.1 Protein Homology CDS 1517773 1518654 . + 0 ID=cds-WP_041181934.1;Parent=gene-LNP58_RS07275;Dbxref=Genbank:WP_041181934.1;Name=WP_041181934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156261.1;locus_tag=LNP58_RS07275;product=PD40 domain-containing protein;protein_id=WP_041181934.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1519092 1519168 . - . ID=gene-LNP58_RS07280;Name=LNP58_RS07280;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07280;old_locus_tag=LNP58_07275 NZ_CP086372.1 cmsearch ncRNA 1519092 1519168 . - . ID=rna-LNP58_RS07280;Parent=gene-LNP58_RS07280;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07280;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1519092 1519168 . - . ID=exon-LNP58_RS07280-1;Parent=rna-LNP58_RS07280;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07280;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1519277 1521811 . - . ID=gene-LNP58_RS07285;Name=LNP58_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07285;old_locus_tag=LNP58_07280 NZ_CP086372.1 Protein Homology CDS 1519277 1521811 . - 0 ID=cds-WP_011257339.1;Parent=gene-LNP58_RS07285;Dbxref=Genbank:WP_011257339.1;Name=WP_011257339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916508.1;locus_tag=LNP58_RS07285;product=sulfite reductase flavoprotein subunit alpha;protein_id=WP_011257339.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1522045 1522797 . + . ID=gene-LNP58_RS07290;Name=LNP58_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07290;old_locus_tag=LNP58_07285 NZ_CP086372.1 Protein Homology CDS 1522045 1522797 . + 0 ID=cds-WP_011407395.1;Parent=gene-LNP58_RS07290;Dbxref=Genbank:WP_011407395.1;Name=WP_011407395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407395.1;locus_tag=LNP58_RS07290;product=DNA/RNA non-specific endonuclease;protein_id=WP_011407395.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1522925 1523839 . - . ID=gene-LNP58_RS07295;Name=LNP58_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07295;old_locus_tag=LNP58_07290 NZ_CP086372.1 Protein Homology CDS 1522925 1523839 . - 0 ID=cds-WP_011407394.1;Parent=gene-LNP58_RS07295;Dbxref=Genbank:WP_011407394.1;Name=WP_011407394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369930.1;locus_tag=LNP58_RS07295;product=LysR family transcriptional regulator;protein_id=WP_011407394.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1523932 1524924 . + . ID=gene-LNP58_RS07300;Name=LNP58_RS07300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07300;old_locus_tag=LNP58_07295;pseudo=true NZ_CP086372.1 Protein Homology CDS 1523932 1524924 . + 0 ID=cds-LNP58_RS07300;Parent=gene-LNP58_RS07300;Note=internal stop;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117813.1;locus_tag=LNP58_RS07300;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1524991 1525067 . + . ID=gene-LNP58_RS07305;Name=LNP58_RS07305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07305;old_locus_tag=LNP58_07300 NZ_CP086372.1 cmsearch ncRNA 1524991 1525067 . + . ID=rna-LNP58_RS07305;Parent=gene-LNP58_RS07305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07305;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1524991 1525067 . + . ID=exon-LNP58_RS07305-1;Parent=rna-LNP58_RS07305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07305;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1525112 1526104 . - . ID=gene-LNP58_RS07310;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LNP58_RS07310;old_locus_tag=LNP58_07305 NZ_CP086372.1 Protein Homology CDS 1525112 1526104 . - 0 ID=cds-WP_011257334.1;Parent=gene-LNP58_RS07310;Dbxref=Genbank:WP_011257334.1;Name=WP_011257334.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303747.1;locus_tag=LNP58_RS07310;product=porphobilinogen synthase;protein_id=WP_011257334.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1526328 1526567 . - . ID=gene-LNP58_RS07315;Name=LNP58_RS07315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07315;old_locus_tag=LNP58_07310;partial=true;pseudo=true;start_range=.,1526328 NZ_CP086372.1 Protein Homology CDS 1526328 1526567 . - 0 ID=cds-LNP58_RS07315;Parent=gene-LNP58_RS07315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916515.1;locus_tag=LNP58_RS07315;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1526328;transl_table=11 NZ_CP086372.1 RefSeq gene 1526769 1527227 . + . ID=gene-LNP58_RS07320;Name=LNP58_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07320;old_locus_tag=LNP58_07315 NZ_CP086372.1 Protein Homology CDS 1526769 1527227 . + 0 ID=cds-WP_069959692.1;Parent=gene-LNP58_RS07320;Dbxref=Genbank:WP_069959692.1;Name=WP_069959692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171777.1;locus_tag=LNP58_RS07320;product=hypothetical protein;protein_id=WP_069959692.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1527327 1529117 . - . ID=gene-LNP58_RS07325;Name=LNP58_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07325;old_locus_tag=LNP58_07320 NZ_CP086372.1 Protein Homology CDS 1527327 1529117 . - 0 ID=cds-WP_069959691.1;Parent=gene-LNP58_RS07325;Dbxref=Genbank:WP_069959691.1;Name=WP_069959691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158571.1;locus_tag=LNP58_RS07325;product=DUF885 domain-containing protein;protein_id=WP_069959691.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1529245 1529321 . + . ID=gene-LNP58_RS07330;Name=LNP58_RS07330;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07330;old_locus_tag=LNP58_07325 NZ_CP086372.1 cmsearch ncRNA 1529245 1529321 . + . ID=rna-LNP58_RS07330;Parent=gene-LNP58_RS07330;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07330;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1529245 1529321 . + . ID=exon-LNP58_RS07330-1;Parent=rna-LNP58_RS07330;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07330;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1529326 1531563 . - . ID=gene-LNP58_RS07335;Name=LNP58_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07335;old_locus_tag=LNP58_07330 NZ_CP086372.1 Protein Homology CDS 1529326 1531563 . - 0 ID=cds-WP_069959690.1;Parent=gene-LNP58_RS07335;Dbxref=Genbank:WP_069959690.1;Name=WP_069959690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257331.1;locus_tag=LNP58_RS07335;product=S9 family peptidase;protein_id=WP_069959690.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1531988 1532677 . - . ID=gene-LNP58_RS07340;Name=LNP58_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07340;old_locus_tag=LNP58_07335 NZ_CP086372.1 Protein Homology CDS 1531988 1532677 . - 0 ID=cds-WP_011257330.1;Parent=gene-LNP58_RS07340;Dbxref=Genbank:WP_011257330.1;Name=WP_011257330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804208.1;locus_tag=LNP58_RS07340;product=glutathione binding-like protein;protein_id=WP_011257330.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1533067 1536081 . + . ID=gene-LNP58_RS07345;Name=LNP58_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07345;old_locus_tag=LNP58_07340 NZ_CP086372.1 Protein Homology CDS 1533067 1536081 . + 0 ID=cds-WP_011407389.1;Parent=gene-LNP58_RS07345;Dbxref=Genbank:WP_011407389.1;Name=WP_011407389.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158727.1;locus_tag=LNP58_RS07345;product=TonB-dependent receptor;protein_id=WP_011407389.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1536265 1536966 . + . ID=gene-LNP58_RS07350;Name=LNP58_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07350;old_locus_tag=LNP58_07345 NZ_CP086372.1 Protein Homology CDS 1536265 1536966 . + 0 ID=cds-WP_011407388.1;Parent=gene-LNP58_RS07350;Dbxref=Genbank:WP_011407388.1;Name=WP_011407388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407388.1;locus_tag=LNP58_RS07350;product=SapC family protein;protein_id=WP_011407388.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1536956 1537969 . + . ID=gene-LNP58_RS07355;Name=LNP58_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07355;old_locus_tag=LNP58_07350 NZ_CP086372.1 Protein Homology CDS 1536956 1537969 . + 0 ID=cds-WP_011257326.1;Parent=gene-LNP58_RS07355;Dbxref=Genbank:WP_011257326.1;Name=WP_011257326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156274.1;locus_tag=LNP58_RS07355;product=cupin-like domain-containing protein;protein_id=WP_011257326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1537980 1539545 . + . ID=gene-LNP58_RS07360;Name=LNP58_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07360;old_locus_tag=LNP58_07355 NZ_CP086372.1 Protein Homology CDS 1537980 1539545 . + 0 ID=cds-WP_041181930.1;Parent=gene-LNP58_RS07360;Dbxref=Genbank:WP_041181930.1;Name=WP_041181930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965065.1;locus_tag=LNP58_RS07360;product=tryptophan 7-halogenase;protein_id=WP_041181930.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1539685 1540707 . + . ID=gene-LNP58_RS07365;Name=LNP58_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07365;old_locus_tag=LNP58_07360 NZ_CP086372.1 Protein Homology CDS 1539685 1540707 . + 0 ID=cds-WP_011407386.1;Parent=gene-LNP58_RS07365;Dbxref=Genbank:WP_011407386.1;Name=WP_011407386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156276.1;locus_tag=LNP58_RS07365;product=energy transducer TonB;protein_id=WP_011407386.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1541117 1542310 . - . ID=gene-LNP58_RS07370;Name=LNP58_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07370;old_locus_tag=LNP58_07365 NZ_CP086372.1 Protein Homology CDS 1541117 1542310 . - 0 ID=cds-WP_011407385.1;Parent=gene-LNP58_RS07370;Dbxref=Genbank:WP_011407385.1;Name=WP_011407385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168416.1;locus_tag=LNP58_RS07370;product=ABC transporter permease;protein_id=WP_011407385.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1542307 1543053 . - . ID=gene-LNP58_RS07375;Name=LNP58_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07375;old_locus_tag=LNP58_07370 NZ_CP086372.1 Protein Homology CDS 1542307 1543053 . - 0 ID=cds-WP_024712051.1;Parent=gene-LNP58_RS07375;Dbxref=Genbank:WP_024712051.1;Name=WP_024712051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=LNP58_RS07375;product=ATP-binding cassette domain-containing protein;protein_id=WP_024712051.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1543085 1544686 . - . ID=gene-LNP58_RS07380;Name=LNP58_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07380;old_locus_tag=LNP58_07375 NZ_CP086372.1 Protein Homology CDS 1543085 1544686 . - 0 ID=cds-WP_011407383.1;Parent=gene-LNP58_RS07380;Dbxref=Genbank:WP_011407383.1;Name=WP_011407383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849961.1;locus_tag=LNP58_RS07380;product=alpha/beta hydrolase;protein_id=WP_011407383.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1544747 1544947 . - . ID=gene-LNP58_RS07385;Name=LNP58_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07385;old_locus_tag=LNP58_07380 NZ_CP086372.1 Protein Homology CDS 1544747 1544947 . - 0 ID=cds-WP_011257320.1;Parent=gene-LNP58_RS07385;Dbxref=Genbank:WP_011257320.1;Name=WP_011257320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903655.1;locus_tag=LNP58_RS07385;product=helix-turn-helix transcriptional regulator;protein_id=WP_011257320.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1544944 1545531 . - . ID=gene-LNP58_RS07390;Name=LNP58_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07390;old_locus_tag=LNP58_07385 NZ_CP086372.1 Protein Homology CDS 1544944 1545531 . - 0 ID=cds-WP_042465424.1;Parent=gene-LNP58_RS07390;Dbxref=Genbank:WP_042465424.1;Name=WP_042465424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156281.1;locus_tag=LNP58_RS07390;product=hypothetical protein;protein_id=WP_042465424.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1545735 1545896 . - . ID=gene-LNP58_RS07395;Name=LNP58_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07395;old_locus_tag=LNP58_07390 NZ_CP086372.1 GeneMarkS-2+ CDS 1545735 1545896 . - 0 ID=cds-WP_153296754.1;Parent=gene-LNP58_RS07395;Dbxref=Genbank:WP_153296754.1;Name=WP_153296754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS07395;product=hypothetical protein;protein_id=WP_153296754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1546017 1546289 . - . ID=gene-LNP58_RS07400;Name=LNP58_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07400;old_locus_tag=LNP58_07395 NZ_CP086372.1 Protein Homology CDS 1546017 1546289 . - 0 ID=cds-WP_011407380.1;Parent=gene-LNP58_RS07400;Dbxref=Genbank:WP_011407380.1;Name=WP_011407380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487297.1;locus_tag=LNP58_RS07400;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011407380.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1546355 1547356 . + . ID=gene-LNP58_RS07405;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=LNP58_RS07405;old_locus_tag=LNP58_07400 NZ_CP086372.1 Protein Homology CDS 1546355 1547356 . + 0 ID=cds-WP_011407379.1;Parent=gene-LNP58_RS07405;Dbxref=Genbank:WP_011407379.1;Name=WP_011407379.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162807.1;locus_tag=LNP58_RS07405;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_011407379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1547441 1548268 . - . ID=gene-LNP58_RS07410;Name=LNP58_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07410;old_locus_tag=LNP58_07405 NZ_CP086372.1 Protein Homology CDS 1547441 1548268 . - 0 ID=cds-WP_075242284.1;Parent=gene-LNP58_RS07410;Dbxref=Genbank:WP_075242284.1;Name=WP_075242284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091363.1;locus_tag=LNP58_RS07410;product=ferredoxin--NADP reductase;protein_id=WP_075242284.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1548305 1549300 . + . ID=gene-LNP58_RS07415;Name=LNP58_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07415;old_locus_tag=LNP58_07410 NZ_CP086372.1 Protein Homology CDS 1548305 1549300 . + 0 ID=cds-WP_011257314.1;Parent=gene-LNP58_RS07415;Dbxref=Genbank:WP_011257314.1;Name=WP_011257314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348950.1;locus_tag=LNP58_RS07415;product=ABC transporter ATP-binding protein;protein_id=WP_011257314.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1549297 1550109 . + . ID=gene-LNP58_RS07420;Name=LNP58_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07420;old_locus_tag=LNP58_07415 NZ_CP086372.1 Protein Homology CDS 1549297 1550109 . + 0 ID=cds-WP_011257313.1;Parent=gene-LNP58_RS07420;Dbxref=Genbank:WP_011257313.1;Name=WP_011257313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156287.1;locus_tag=LNP58_RS07420;product=ABC transporter permease;protein_id=WP_011257313.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1550073 1550861 . + . ID=gene-LNP58_RS07425;Name=LNP58_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07425;old_locus_tag=LNP58_07420 NZ_CP086372.1 Protein Homology CDS 1550073 1550861 . + 0 ID=cds-WP_080493948.1;Parent=gene-LNP58_RS07425;Dbxref=Genbank:WP_080493948.1;Name=WP_080493948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304284.1;locus_tag=LNP58_RS07425;product=DUF3800 domain-containing protein;protein_id=WP_080493948.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1550980 1551918 . + . ID=gene-LNP58_RS07430;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LNP58_RS07430;old_locus_tag=LNP58_07425 NZ_CP086372.1 Protein Homology CDS 1550980 1551918 . + 0 ID=cds-WP_042465421.1;Parent=gene-LNP58_RS07430;Dbxref=Genbank:WP_042465421.1;Name=WP_042465421.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091365.1;locus_tag=LNP58_RS07430;product=2-dehydropantoate 2-reductase;protein_id=WP_042465421.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1552032 1552178 . - . ID=gene-LNP58_RS07435;Name=LNP58_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07435;old_locus_tag=LNP58_07430 NZ_CP086372.1 GeneMarkS-2+ CDS 1552032 1552178 . - 0 ID=cds-WP_178383653.1;Parent=gene-LNP58_RS07435;Dbxref=Genbank:WP_178383653.1;Name=WP_178383653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS07435;product=hypothetical protein;protein_id=WP_178383653.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1552345 1553580 . - . ID=gene-LNP58_RS07440;Name=LNP58_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07440;old_locus_tag=LNP58_07435 NZ_CP086372.1 Protein Homology CDS 1552345 1553580 . - 0 ID=cds-WP_069959761.1-3;Parent=gene-LNP58_RS07440;Dbxref=Genbank:WP_069959761.1;Name=WP_069959761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS07440;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_069959761.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1553633 1554829 . - . ID=gene-LNP58_RS07445;Name=LNP58_RS07445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07445;old_locus_tag=LNP58_07440;pseudo=true NZ_CP086372.1 Protein Homology CDS 1553633 1554829 . - 0 ID=cds-LNP58_RS07445;Parent=gene-LNP58_RS07445;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS07445;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1554964 1555803 . + . ID=gene-LNP58_RS07450;Name=LNP58_RS07450;end_range=1555803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07450;old_locus_tag=LNP58_07445;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1554964 1555803 . + 0 ID=cds-LNP58_RS07450;Parent=gene-LNP58_RS07450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1555803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS07450;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1555890 1556855 . + . ID=gene-LNP58_RS07455;Name=LNP58_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07455;old_locus_tag=LNP58_07450 NZ_CP086372.1 Protein Homology CDS 1555890 1556855 . + 0 ID=cds-WP_109182067.1-2;Parent=gene-LNP58_RS07455;Dbxref=Genbank:WP_109182067.1;Name=WP_109182067.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS07455;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182067.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1556939 1558257 . - . ID=gene-LNP58_RS07460;Name=LNP58_RS07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07460;old_locus_tag=LNP58_07455;pseudo=true NZ_CP086372.1 Protein Homology CDS 1556939 1558257 . - 0 ID=cds-LNP58_RS07460;Parent=gene-LNP58_RS07460;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS07460;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1558382 1558864 . + . ID=gene-LNP58_RS07465;Name=LNP58_RS07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07465;old_locus_tag=LNP58_07460;partial=true;pseudo=true;start_range=.,1558382 NZ_CP086372.1 Protein Homology CDS 1558382 1558864 . + 0 ID=cds-LNP58_RS07465;Parent=gene-LNP58_RS07465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS07465;partial=true;product=transposase;pseudo=true;start_range=.,1558382;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1558948 1560048 . - . ID=gene-LNP58_RS07470;Name=LNP58_RS07470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07470;old_locus_tag=LNP58_07465;pseudo=true NZ_CP086372.1 Protein Homology CDS 1558948 1560048 . - 0 ID=cds-LNP58_RS07470;Parent=gene-LNP58_RS07470;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS07470;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1560809 1561572 . + . ID=gene-LNP58_RS07475;Name=LNP58_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07475;old_locus_tag=LNP58_07470 NZ_CP086372.1 Protein Homology CDS 1560809 1561124 . + 0 ID=cds-WP_094187710.1;Parent=gene-LNP58_RS07475;Dbxref=Genbank:WP_094187710.1;Name=WP_094187710.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07475;product=IS5 family transposase;protein_id=WP_094187710.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1561124 1561572 . + 2 ID=cds-WP_094187710.1;Parent=gene-LNP58_RS07475;Dbxref=Genbank:WP_094187710.1;Name=WP_094187710.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07475;product=IS5 family transposase;protein_id=WP_094187710.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1561632 1562430 . + . ID=gene-LNP58_RS07480;Name=LNP58_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07480;old_locus_tag=LNP58_07475 NZ_CP086372.1 Protein Homology CDS 1561632 1561903 . + 0 ID=cds-WP_115801865.1;Parent=gene-LNP58_RS07480;Dbxref=Genbank:WP_115801865.1;Name=WP_115801865.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07480;product=IS5 family transposase;protein_id=WP_115801865.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1561902 1562430 . + 1 ID=cds-WP_115801865.1;Parent=gene-LNP58_RS07480;Dbxref=Genbank:WP_115801865.1;Name=WP_115801865.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07480;product=IS5 family transposase;protein_id=WP_115801865.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1562503 1562579 . + . ID=gene-LNP58_RS07485;Name=LNP58_RS07485;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07485;old_locus_tag=LNP58_07480 NZ_CP086372.1 cmsearch ncRNA 1562503 1562579 . + . ID=rna-LNP58_RS07485;Parent=gene-LNP58_RS07485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07485;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1562503 1562579 . + . ID=exon-LNP58_RS07485-1;Parent=rna-LNP58_RS07485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07485;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1562782 1563066 . - . ID=gene-LNP58_RS07490;Name=LNP58_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07490;old_locus_tag=LNP58_07485 NZ_CP086372.1 Protein Homology CDS 1562782 1563066 . - 0 ID=cds-WP_011407366.1;Parent=gene-LNP58_RS07490;Dbxref=Genbank:WP_011407366.1;Name=WP_011407366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=LNP58_RS07490;product=hypothetical protein;protein_id=WP_011407366.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1563565 1564919 . + . ID=gene-LNP58_RS07495;Name=LNP58_RS07495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07495;old_locus_tag=LNP58_07490;pseudo=true NZ_CP086372.1 Protein Homology CDS 1563565 1564919 . + 0 ID=cds-LNP58_RS07495;Parent=gene-LNP58_RS07495;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS07495;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1565416 1566516 . - . ID=gene-LNP58_RS07500;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=pseudogene;locus_tag=LNP58_RS07500;old_locus_tag=LNP58_07495;partial=true;pseudo=true;start_range=.,1565416 NZ_CP086372.1 Protein Homology CDS 1565416 1566516 . - 0 ID=cds-LNP58_RS07500;Parent=gene-LNP58_RS07500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379859.1;locus_tag=LNP58_RS07500;partial=true;product=D-alanine--D-alanine ligase;pseudo=true;start_range=.,1565416;transl_table=11 NZ_CP086372.1 RefSeq gene 1566751 1567395 . + . ID=gene-LNP58_RS07505;Name=LNP58_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07505;old_locus_tag=LNP58_07500 NZ_CP086372.1 Protein Homology CDS 1566751 1567395 . + 0 ID=cds-WP_044757204.1;Parent=gene-LNP58_RS07505;Dbxref=Genbank:WP_044757204.1;Name=WP_044757204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156427.1;locus_tag=LNP58_RS07505;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_044757204.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1567392 1569065 . + . ID=gene-LNP58_RS07510;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LNP58_RS07510;old_locus_tag=LNP58_07505 NZ_CP086372.1 Protein Homology CDS 1567392 1569065 . + 0 ID=cds-WP_011257293.1;Parent=gene-LNP58_RS07510;Dbxref=Genbank:WP_011257293.1;Name=WP_011257293.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304665.1;locus_tag=LNP58_RS07510;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_011257293.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1569075 1569568 . + . ID=gene-LNP58_RS07515;Name=LNP58_RS07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07515;old_locus_tag=LNP58_07510;pseudo=true NZ_CP086372.1 Protein Homology CDS 1569075 1569568 . + 0 ID=cds-LNP58_RS07515;Parent=gene-LNP58_RS07515;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156429.1;locus_tag=LNP58_RS07515;product=cupin domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1569793 1570545 . + . ID=gene-LNP58_RS07520;Name=LNP58_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07520;old_locus_tag=LNP58_07515 NZ_CP086372.1 Protein Homology CDS 1569793 1570545 . + 0 ID=cds-WP_027703865.1;Parent=gene-LNP58_RS07520;Dbxref=Genbank:WP_027703865.1;Name=WP_027703865.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301087.1;locus_tag=LNP58_RS07520;product=pseudouridine synthase;protein_id=WP_027703865.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1570641 1571219 . - . ID=gene-LNP58_RS07525;Name=LNP58_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07525;old_locus_tag=LNP58_07520 NZ_CP086372.1 Protein Homology CDS 1570641 1571219 . - 0 ID=cds-WP_011407361.1;Parent=gene-LNP58_RS07525;Dbxref=Genbank:WP_011407361.1;Name=WP_011407361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966404.1;locus_tag=LNP58_RS07525;product=DUF2059 domain-containing protein;protein_id=WP_011407361.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1571276 1571707 . + . ID=gene-LNP58_RS07530;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LNP58_RS07530;old_locus_tag=LNP58_07525 NZ_CP086372.1 Protein Homology CDS 1571276 1571707 . + 0 ID=cds-WP_011257289.1;Parent=gene-LNP58_RS07530;Dbxref=Genbank:WP_011257289.1;Name=WP_011257289.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257289.1;locus_tag=LNP58_RS07530;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_011257289.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1571710 1572339 . + . ID=gene-LNP58_RS07535;Name=LNP58_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07535;old_locus_tag=LNP58_07530 NZ_CP086372.1 Protein Homology CDS 1571710 1572339 . + 0 ID=cds-WP_011257288.1;Parent=gene-LNP58_RS07535;Dbxref=Genbank:WP_011257288.1;Name=WP_011257288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301090.1;locus_tag=LNP58_RS07535;product=lysophosphatidylcholine acyltransferase;protein_id=WP_011257288.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1572418 1572603 . + . ID=gene-LNP58_RS07540;Name=LNP58_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07540;old_locus_tag=LNP58_07535 NZ_CP086372.1 GeneMarkS-2+ CDS 1572418 1572603 . + 0 ID=cds-WP_012446356.1;Parent=gene-LNP58_RS07540;Dbxref=Genbank:WP_012446356.1;Name=WP_012446356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS07540;product=hypothetical protein;protein_id=WP_012446356.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1572709 1572868 . + . ID=gene-LNP58_RS07545;Name=LNP58_RS07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07545;old_locus_tag=LNP58_07540;partial=true;pseudo=true;start_range=.,1572709 NZ_CP086372.1 Protein Homology CDS 1572709 1572868 . + 0 ID=cds-LNP58_RS07545;Parent=gene-LNP58_RS07545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117620.1;locus_tag=LNP58_RS07545;partial=true;product=isoaspartyl peptidase/L-asparaginase;pseudo=true;start_range=.,1572709;transl_table=11 NZ_CP086372.1 RefSeq gene 1572977 1575145 . + . ID=gene-LNP58_RS07550;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=LNP58_RS07550;old_locus_tag=LNP58_07545 NZ_CP086372.1 Protein Homology CDS 1572977 1575145 . + 0 ID=cds-WP_069959687.1;Parent=gene-LNP58_RS07550;Dbxref=Genbank:WP_069959687.1;Name=WP_069959687.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115821.1;locus_tag=LNP58_RS07550;product=peptidyl-dipeptidase Dcp;protein_id=WP_069959687.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1575272 1577434 . - . ID=gene-LNP58_RS07555;Name=xopN;gbkey=Gene;gene=xopN;gene_biotype=protein_coding;locus_tag=LNP58_RS07555;old_locus_tag=LNP58_07550 NZ_CP086372.1 Protein Homology CDS 1575272 1577434 . - 0 ID=cds-WP_011407357.1;Parent=gene-LNP58_RS07555;Dbxref=Genbank:WP_011407357.1;Name=WP_011407357.1;Ontology_term=GO:0030254;gbkey=CDS;gene=xopN;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115822.1;locus_tag=LNP58_RS07555;product=type III secretion system effector protein XopN;protein_id=WP_011407357.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1578004 1578255 . + . ID=gene-LNP58_RS07565;Name=tnpA;end_range=1578255,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LNP58_RS07565;old_locus_tag=LNP58_07560;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1578004 1578255 . + 0 ID=cds-LNP58_RS07565;Parent=gene-LNP58_RS07565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1578255,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043768368.1;locus_tag=LNP58_RS07565;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1578261 1579226 . - . ID=gene-LNP58_RS07570;Name=LNP58_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07570;old_locus_tag=LNP58_07565 NZ_CP086372.1 Protein Homology CDS 1578261 1579226 . - 0 ID=cds-WP_109182027.1;Parent=gene-LNP58_RS07570;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS07570;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1579316 1579408 . + . ID=gene-LNP58_RS07575;Name=LNP58_RS07575;end_range=1579408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07575;old_locus_tag=LNP58_07570;partial=true;pseudo=true;start_range=.,1579316 NZ_CP086372.1 Protein Homology CDS 1579316 1579408 . + 0 ID=cds-LNP58_RS07575;Parent=gene-LNP58_RS07575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1579408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043768368.1;locus_tag=LNP58_RS07575;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1579316;transl_table=11 NZ_CP086372.1 RefSeq gene 1579419 1580906 . - . ID=gene-LNP58_RS07580;Name=LNP58_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07580;old_locus_tag=LNP58_07575 NZ_CP086372.1 Protein Homology CDS 1579419 1580906 . - 0 ID=cds-WP_228329677.1;Parent=gene-LNP58_RS07580;Dbxref=Genbank:WP_228329677.1;Name=WP_228329677.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS07580;product=IS5-like element ISXoo5 family transposase;protein_id=WP_228329677.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1581343 1581702 . - . ID=gene-LNP58_RS07585;Name=LNP58_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07585;old_locus_tag=LNP58_07580 NZ_CP086372.1 Protein Homology CDS 1581343 1581702 . - 0 ID=cds-WP_011257283.1;Parent=gene-LNP58_RS07585;Dbxref=Genbank:WP_011257283.1;Name=WP_011257283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349049.1;locus_tag=LNP58_RS07585;product=L-fucose mutarotase;protein_id=WP_011257283.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1581705 1583006 . - . ID=gene-LNP58_RS07590;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LNP58_RS07590;old_locus_tag=LNP58_07585 NZ_CP086372.1 Protein Homology CDS 1581705 1583006 . - 0 ID=cds-WP_069959686.1;Parent=gene-LNP58_RS07590;Dbxref=Genbank:WP_069959686.1;Name=WP_069959686.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161920.1;locus_tag=LNP58_RS07590;product=L-fucose:H+ symporter permease;protein_id=WP_069959686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1583187 1583963 . + . ID=gene-LNP58_RS07595;Name=LNP58_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07595;old_locus_tag=LNP58_07590 NZ_CP086372.1 Protein Homology CDS 1583187 1583963 . + 0 ID=cds-WP_011407354.1;Parent=gene-LNP58_RS07595;Dbxref=Genbank:WP_011407354.1;Name=WP_011407354.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407354.1;locus_tag=LNP58_RS07595;product=helix-turn-helix domain-containing protein;protein_id=WP_011407354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1584440 1585024 . + . ID=gene-LNP58_RS07600;Name=LNP58_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07600;old_locus_tag=LNP58_07595 NZ_CP086372.1 Protein Homology CDS 1584440 1585024 . + 0 ID=cds-WP_011407353.1;Parent=gene-LNP58_RS07600;Dbxref=Genbank:WP_011407353.1;Name=WP_011407353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407353.1;locus_tag=LNP58_RS07600;product=manganese efflux pump MntP family protein;protein_id=WP_011407353.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1585217 1588669 . - . ID=gene-LNP58_RS07605;Name=LNP58_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07605;old_locus_tag=LNP58_07600 NZ_CP086372.1 Protein Homology CDS 1585217 1588669 . - 0 ID=cds-WP_011407352.1;Parent=gene-LNP58_RS07605;Dbxref=Genbank:WP_011407352.1;Name=WP_011407352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446364.1;locus_tag=LNP58_RS07605;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_011407352.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1589414 1592056 . + . ID=gene-LNP58_RS07610;Name=LNP58_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07610;old_locus_tag=LNP58_07605 NZ_CP086372.1 Protein Homology CDS 1589414 1592056 . + 0 ID=cds-WP_075242185.1;Parent=gene-LNP58_RS07610;Dbxref=Genbank:WP_075242185.1;Name=WP_075242185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966495.1;locus_tag=LNP58_RS07610;product=glycosyl hydrolase 115 family protein;protein_id=WP_075242185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1592160 1594559 . - . ID=gene-LNP58_RS07615;Name=LNP58_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07615;old_locus_tag=LNP58_07610 NZ_CP086372.1 Protein Homology CDS 1592160 1594559 . - 0 ID=cds-WP_044757567.1;Parent=gene-LNP58_RS07615;Dbxref=Genbank:WP_044757567.1;Name=WP_044757567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487634.1;locus_tag=LNP58_RS07615;product=NdvB protein;protein_id=WP_044757567.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1594562 1595944 . - . ID=gene-LNP58_RS07620;Name=LNP58_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07620;old_locus_tag=LNP58_07615 NZ_CP086372.1 Protein Homology CDS 1594562 1595944 . - 0 ID=cds-WP_011407349.1;Parent=gene-LNP58_RS07620;Dbxref=Genbank:WP_011407349.1;Name=WP_011407349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302349.1;locus_tag=LNP58_RS07620;product=MFS transporter;protein_id=WP_011407349.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1596102 1596686 . + . ID=gene-LNP58_RS07625;Name=LNP58_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07625;old_locus_tag=LNP58_07620 NZ_CP086372.1 Protein Homology CDS 1596102 1596686 . + 0 ID=cds-WP_027703800.1;Parent=gene-LNP58_RS07625;Dbxref=Genbank:WP_027703800.1;Name=WP_027703800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571736.1;locus_tag=LNP58_RS07625;product=gluconokinase;protein_id=WP_027703800.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1596739 1597502 . - . ID=gene-LNP58_RS07630;Name=LNP58_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07630;old_locus_tag=LNP58_07625 NZ_CP086372.1 Protein Homology CDS 1597187 1597502 . - 0 ID=cds-WP_109182012.1-2;Parent=gene-LNP58_RS07630;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07630;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1596739 1597187 . - 2 ID=cds-WP_109182012.1-2;Parent=gene-LNP58_RS07630;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07630;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1598425 1600179 . + . ID=gene-LNP58_RS07635;Name=LNP58_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07635;old_locus_tag=LNP58_07630 NZ_CP086372.1 Protein Homology CDS 1598425 1600179 . + 0 ID=cds-WP_011407346.1;Parent=gene-LNP58_RS07635;Dbxref=Genbank:WP_011407346.1;Name=WP_011407346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923088.1;locus_tag=LNP58_RS07635;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_011407346.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1600487 1600714 . - . ID=gene-LNP58_RS07640;Name=LNP58_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07640;old_locus_tag=LNP58_07635 NZ_CP086372.1 Protein Homology CDS 1600487 1600714 . - 0 ID=cds-WP_011257273.1;Parent=gene-LNP58_RS07640;Dbxref=Genbank:WP_011257273.1;Name=WP_011257273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849816.1;locus_tag=LNP58_RS07640;product=hypothetical protein;protein_id=WP_011257273.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1600695 1601144 . - . ID=gene-LNP58_RS07645;Name=LNP58_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07645;old_locus_tag=LNP58_07640 NZ_CP086372.1 Protein Homology CDS 1600695 1601144 . - 0 ID=cds-WP_011407344.1;Parent=gene-LNP58_RS07645;Dbxref=Genbank:WP_011407344.1;Name=WP_011407344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966506.1;locus_tag=LNP58_RS07645;product=3-dehydroquinate dehydratase;protein_id=WP_011407344.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1601155 1601583 . - . ID=gene-LNP58_RS07650;Name=LNP58_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07650;old_locus_tag=LNP58_07645 NZ_CP086372.1 Protein Homology CDS 1601155 1601583 . - 0 ID=cds-WP_011257271.1;Parent=gene-LNP58_RS07650;Dbxref=Genbank:WP_011257271.1;Name=WP_011257271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303396.1;locus_tag=LNP58_RS07650;product=hypothetical protein;protein_id=WP_011257271.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1601903 1602929 . + . ID=gene-LNP58_RS07655;Name=LNP58_RS07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07655;old_locus_tag=LNP58_07650;pseudo=true NZ_CP086372.1 Protein Homology CDS 1601903 1602929 . + 0 ID=cds-LNP58_RS07655;Parent=gene-LNP58_RS07655;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS07655;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1602982 1604217 . + . ID=gene-LNP58_RS07660;Name=LNP58_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07660;old_locus_tag=LNP58_07655 NZ_CP086372.1 Protein Homology CDS 1602982 1604217 . + 0 ID=cds-WP_011257269.1;Parent=gene-LNP58_RS07660;Dbxref=Genbank:WP_011257269.1;Name=WP_011257269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS07660;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1604379 1605210 . - . ID=gene-LNP58_RS07665;Name=LNP58_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07665;old_locus_tag=LNP58_07660 NZ_CP086372.1 Protein Homology CDS 1604939 1605210 . - 0 ID=cds-WP_109182063.1;Parent=gene-LNP58_RS07665;Dbxref=Genbank:WP_109182063.1;Name=WP_109182063.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07665;product=IS5 family transposase;protein_id=WP_109182063.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1604379 1604940 . - 1 ID=cds-WP_109182063.1;Parent=gene-LNP58_RS07665;Dbxref=Genbank:WP_109182063.1;Name=WP_109182063.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07665;product=IS5 family transposase;protein_id=WP_109182063.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1605270 1606484 . - . ID=gene-LNP58_RS07670;Name=LNP58_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07670;old_locus_tag=LNP58_07665 NZ_CP086372.1 Protein Homology CDS 1605270 1606484 . - 0 ID=cds-WP_011407338.1;Parent=gene-LNP58_RS07670;Dbxref=Genbank:WP_011407338.1;Name=WP_011407338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS07670;product=IS4-like element ISXo14 family transposase;protein_id=WP_011407338.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1606616 1607414 . + . ID=gene-LNP58_RS07675;Name=LNP58_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07675;old_locus_tag=LNP58_07670 NZ_CP086372.1 Protein Homology CDS 1606616 1606887 . + 0 ID=cds-WP_109182062.1;Parent=gene-LNP58_RS07675;Dbxref=Genbank:WP_109182062.1;Name=WP_109182062.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07675;product=IS5 family transposase;protein_id=WP_109182062.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1606886 1607414 . + 1 ID=cds-WP_109182062.1;Parent=gene-LNP58_RS07675;Dbxref=Genbank:WP_109182062.1;Name=WP_109182062.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07675;product=IS5 family transposase;protein_id=WP_109182062.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1607453 1608216 . - . ID=gene-LNP58_RS07680;Name=LNP58_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07680;old_locus_tag=LNP58_07675 NZ_CP086372.1 Protein Homology CDS 1607901 1608216 . - 0 ID=cds-WP_109182012.1-3;Parent=gene-LNP58_RS07680;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07680;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1607453 1607901 . - 2 ID=cds-WP_109182012.1-3;Parent=gene-LNP58_RS07680;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07680;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1608288 1609244 . - . ID=gene-LNP58_RS07685;Name=LNP58_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07685;old_locus_tag=LNP58_07680 NZ_CP086372.1 Protein Homology CDS 1608288 1609244 . - 0 ID=cds-WP_069959685.1;Parent=gene-LNP58_RS07685;Dbxref=Genbank:WP_069959685.1;Name=WP_069959685.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS07685;product=IS30-like element IS1112 family transposase;protein_id=WP_069959685.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1609332 1610000 . + . ID=gene-LNP58_RS07690;Name=LNP58_RS07690;end_range=1610000,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07690;old_locus_tag=LNP58_07685;partial=true;pseudo=true;start_range=.,1609332 NZ_CP086372.1 Protein Homology CDS 1609332 1610000 . + 0 ID=cds-LNP58_RS07690;Parent=gene-LNP58_RS07690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1610000,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=LNP58_RS07690;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1609332;transl_table=11 NZ_CP086372.1 RefSeq gene 1610089 1611054 . + . ID=gene-LNP58_RS07695;Name=LNP58_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07695;old_locus_tag=LNP58_07690 NZ_CP086372.1 Protein Homology CDS 1610089 1611054 . + 0 ID=cds-WP_109182061.1;Parent=gene-LNP58_RS07695;Dbxref=Genbank:WP_109182061.1;Name=WP_109182061.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS07695;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182061.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1611072 1611629 . + . ID=gene-LNP58_RS07700;Name=LNP58_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07700;old_locus_tag=LNP58_07695 NZ_CP086372.1 Protein Homology CDS 1611072 1611629 . + 0 ID=cds-WP_027703982.1;Parent=gene-LNP58_RS07700;Dbxref=Genbank:WP_027703982.1;Name=WP_027703982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112941.1;locus_tag=LNP58_RS07700;product=GNAT family N-acetyltransferase;protein_id=WP_027703982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1611648 1611935 . - . ID=gene-LNP58_RS07705;Name=LNP58_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07705;old_locus_tag=LNP58_07700 NZ_CP086372.1 Protein Homology CDS 1611648 1611935 . - 0 ID=cds-WP_011257259.1;Parent=gene-LNP58_RS07705;Dbxref=Genbank:WP_011257259.1;Name=WP_011257259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364918.1;locus_tag=LNP58_RS07705;product=hypothetical protein;protein_id=WP_011257259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1612320 1613114 . + . ID=gene-LNP58_RS07710;Name=LNP58_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07710;old_locus_tag=LNP58_07705 NZ_CP086372.1 Protein Homology CDS 1612320 1613114 . + 0 ID=cds-WP_011407332.1;Parent=gene-LNP58_RS07710;Dbxref=Genbank:WP_011407332.1;Name=WP_011407332.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451570.1;locus_tag=LNP58_RS07710;product=ATP-binding cassette domain-containing protein;protein_id=WP_011407332.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1613114 1613863 . + . ID=gene-LNP58_RS07715;Name=LNP58_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07715;old_locus_tag=LNP58_07710 NZ_CP086372.1 Protein Homology CDS 1613114 1613863 . + 0 ID=cds-WP_011257257.1;Parent=gene-LNP58_RS07715;Dbxref=Genbank:WP_011257257.1;Name=WP_011257257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302478.1;locus_tag=LNP58_RS07715;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_011257257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1613875 1614426 . + . ID=gene-LNP58_RS07720;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LNP58_RS07720;old_locus_tag=LNP58_07715 NZ_CP086372.1 Protein Homology CDS 1613875 1614426 . + 0 ID=cds-WP_012446379.1;Parent=gene-LNP58_RS07720;Dbxref=Genbank:WP_012446379.1;Name=WP_012446379.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575276.1;locus_tag=LNP58_RS07720;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_012446379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1614423 1615085 . + . ID=gene-LNP58_RS07725;Name=LNP58_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07725;old_locus_tag=LNP58_07720 NZ_CP086372.1 Protein Homology CDS 1614423 1615085 . + 0 ID=cds-WP_011257255.1;Parent=gene-LNP58_RS07725;Dbxref=Genbank:WP_011257255.1;Name=WP_011257255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482305.1;locus_tag=LNP58_RS07725;product=ABC transporter substrate-binding protein;protein_id=WP_011257255.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1615075 1615365 . + . ID=gene-LNP58_RS07730;Name=LNP58_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07730;old_locus_tag=LNP58_07725 NZ_CP086372.1 Protein Homology CDS 1615075 1615365 . + 0 ID=cds-WP_011257254.1;Parent=gene-LNP58_RS07730;Dbxref=Genbank:WP_011257254.1;Name=WP_011257254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257254.1;locus_tag=LNP58_RS07730;product=STAS domain-containing protein;protein_id=WP_011257254.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1615376 1616434 . + . ID=gene-LNP58_RS07735;Name=LNP58_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07735;old_locus_tag=LNP58_07730 NZ_CP086372.1 Protein Homology CDS 1615376 1616434 . + 0 ID=cds-WP_011257253.1;Parent=gene-LNP58_RS07735;Dbxref=Genbank:WP_011257253.1;Name=WP_011257253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163758.1;locus_tag=LNP58_RS07735;product=VacJ family lipoprotein;protein_id=WP_011257253.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1616727 1618103 . - . ID=gene-LNP58_RS07740;Name=LNP58_RS07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07740;old_locus_tag=LNP58_07735;pseudo=true NZ_CP086372.1 Protein Homology CDS 1616727 1618103 . - 0 ID=cds-LNP58_RS07740;Parent=gene-LNP58_RS07740;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS07740;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1618233 1618996 . - . ID=gene-LNP58_RS07745;Name=LNP58_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07745;old_locus_tag=LNP58_07740 NZ_CP086372.1 Protein Homology CDS 1618681 1618996 . - 0 ID=cds-WP_109182012.1-4;Parent=gene-LNP58_RS07745;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07745;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1618233 1618681 . - 2 ID=cds-WP_109182012.1-4;Parent=gene-LNP58_RS07745;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS07745;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1619101 1620063 . + . ID=gene-LNP58_RS07750;Name=LNP58_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07750;old_locus_tag=LNP58_07745 NZ_CP086372.1 Protein Homology CDS 1619101 1620063 . + 0 ID=cds-WP_041182297.1;Parent=gene-LNP58_RS07750;Dbxref=Genbank:WP_041182297.1;Name=WP_041182297.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS07750;product=IS1595-like element ISXo2 family transposase;protein_id=WP_041182297.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1620410 1621225 . - . ID=gene-LNP58_RS07755;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LNP58_RS07755;old_locus_tag=LNP58_07750 NZ_CP086372.1 Protein Homology CDS 1620410 1621225 . - 0 ID=cds-WP_011407325.1;Parent=gene-LNP58_RS07755;Dbxref=Genbank:WP_011407325.1;Name=WP_011407325.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439681.1;locus_tag=LNP58_RS07755;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_011407325.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1621469 1621663 . + . ID=gene-LNP58_RS07760;Name=LNP58_RS07760;end_range=1621663,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07760;old_locus_tag=LNP58_07755;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1621469 1621663 . + 0 ID=cds-LNP58_RS07760;Parent=gene-LNP58_RS07760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1621663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS07760;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1621749 1622039 . + . ID=gene-LNP58_RS07765;Name=LNP58_RS07765;end_range=1622039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07765;old_locus_tag=LNP58_07760;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1621749 1622039 . + 0 ID=cds-LNP58_RS07765;Parent=gene-LNP58_RS07765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1622039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS07765;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1622166 1623208 . + . ID=gene-LNP58_RS07770;Name=LNP58_RS07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07770;old_locus_tag=LNP58_07765;pseudo=true NZ_CP086372.1 Protein Homology CDS 1622166 1623208 . + 0 ID=cds-LNP58_RS07770;Parent=gene-LNP58_RS07770;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS07770;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1623305 1623419 . - . ID=gene-LNP58_RS07775;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LNP58_RS07775;old_locus_tag=LNP58_07770 NZ_CP086372.1 cmsearch rRNA 1623305 1623419 . - . ID=rna-LNP58_RS07775;Parent=gene-LNP58_RS07775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07775;product=5S ribosomal RNA NZ_CP086372.1 cmsearch exon 1623305 1623419 . - . ID=exon-LNP58_RS07775-1;Parent=rna-LNP58_RS07775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07775;product=5S ribosomal RNA NZ_CP086372.1 RefSeq gene 1623593 1626475 . - . ID=gene-LNP58_RS07780;Name=LNP58_RS07780;gbkey=Gene;gene_biotype=rRNA;locus_tag=LNP58_RS07780;old_locus_tag=LNP58_07775 NZ_CP086372.1 cmsearch rRNA 1623593 1626475 . - . ID=rna-LNP58_RS07780;Parent=gene-LNP58_RS07780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07780;product=23S ribosomal RNA NZ_CP086372.1 cmsearch exon 1623593 1626475 . - . ID=exon-LNP58_RS07780-1;Parent=rna-LNP58_RS07780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07780;product=23S ribosomal RNA NZ_CP086372.1 RefSeq gene 1626703 1626779 . - . ID=gene-LNP58_RS07785;Name=LNP58_RS07785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS07785;old_locus_tag=LNP58_07780 NZ_CP086372.1 tRNAscan-SE tRNA 1626703 1626779 . - . ID=rna-LNP58_RS07785;Parent=gene-LNP58_RS07785;anticodon=(pos:complement(1626743..1626745));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07785;product=tRNA-Ile NZ_CP086372.1 tRNAscan-SE exon 1626703 1626779 . - . ID=exon-LNP58_RS07785-1;Parent=rna-LNP58_RS07785;anticodon=(pos:complement(1626743..1626745));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07785;product=tRNA-Ile NZ_CP086372.1 RefSeq gene 1626799 1626874 . - . ID=gene-LNP58_RS07790;Name=LNP58_RS07790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS07790;old_locus_tag=LNP58_07785 NZ_CP086372.1 tRNAscan-SE tRNA 1626799 1626874 . - . ID=rna-LNP58_RS07790;Parent=gene-LNP58_RS07790;anticodon=(pos:complement(1626839..1626841));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07790;product=tRNA-Ala NZ_CP086372.1 tRNAscan-SE exon 1626799 1626874 . - . ID=exon-LNP58_RS07790-1;Parent=rna-LNP58_RS07790;anticodon=(pos:complement(1626839..1626841));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS07790;product=tRNA-Ala NZ_CP086372.1 RefSeq gene 1626968 1628514 . - . ID=gene-LNP58_RS07795;Name=LNP58_RS07795;gbkey=Gene;gene_biotype=rRNA;locus_tag=LNP58_RS07795;old_locus_tag=LNP58_07790 NZ_CP086372.1 cmsearch rRNA 1626968 1628514 . - . ID=rna-LNP58_RS07795;Parent=gene-LNP58_RS07795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07795;product=16S ribosomal RNA NZ_CP086372.1 cmsearch exon 1626968 1628514 . - . ID=exon-LNP58_RS07795-1;Parent=rna-LNP58_RS07795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07795;product=16S ribosomal RNA NZ_CP086372.1 RefSeq pseudogene 1629266 1630436 . + . ID=gene-LNP58_RS07800;Name=LNP58_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07800;old_locus_tag=LNP58_07795;pseudo=true NZ_CP086372.1 Protein Homology CDS 1629266 1630436 . + 0 ID=cds-LNP58_RS07800;Parent=gene-LNP58_RS07800;Note=frameshifted;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916614.1;locus_tag=LNP58_RS07800;product=benzoate/H(+) symporter BenE family transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1630545 1632449 . - . ID=gene-LNP58_RS07805;Name=LNP58_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07805;old_locus_tag=LNP58_07800 NZ_CP086372.1 Protein Homology CDS 1630545 1632449 . - 0 ID=cds-WP_011257245.1;Parent=gene-LNP58_RS07805;Dbxref=Genbank:WP_011257245.1;Name=WP_011257245.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501448.1;locus_tag=LNP58_RS07805;product=GAF domain-containing protein;protein_id=WP_011257245.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1632446 1633048 . - . ID=gene-LNP58_RS07810;Name=LNP58_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07810;old_locus_tag=LNP58_07805 NZ_CP086372.1 Protein Homology CDS 1632446 1633048 . - 0 ID=cds-WP_011407319.1;Parent=gene-LNP58_RS07810;Dbxref=Genbank:WP_011407319.1;Name=WP_011407319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501447.1;locus_tag=LNP58_RS07810;product=biliverdin-producing heme oxygenase;protein_id=WP_011407319.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1633149 1634412 . - . ID=gene-LNP58_RS07815;Name=LNP58_RS07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07815;old_locus_tag=LNP58_07810;pseudo=true NZ_CP086372.1 Protein Homology CDS 1633149 1634412 . - 0 ID=cds-LNP58_RS07815;Parent=gene-LNP58_RS07815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302308.1;locus_tag=LNP58_RS07815;product=TCR/Tet family MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1634960 1637122 . - . ID=gene-LNP58_RS07820;Name=LNP58_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07820;old_locus_tag=LNP58_07815 NZ_CP086372.1 Protein Homology CDS 1634960 1637122 . - 0 ID=cds-WP_011257243.1;Parent=gene-LNP58_RS07820;Dbxref=Genbank:WP_011257243.1;Name=WP_011257243.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574667.1;locus_tag=LNP58_RS07820;product=lytic murein transglycosylase;protein_id=WP_011257243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1637376 1638344 . - . ID=gene-LNP58_RS07825;Name=LNP58_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07825;old_locus_tag=LNP58_07820 NZ_CP086372.1 Protein Homology CDS 1637376 1638344 . - 0 ID=cds-WP_011257031.1;Parent=gene-LNP58_RS07825;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS07825;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1638459 1638533 . + . ID=gene-LNP58_RS07830;Name=LNP58_RS07830;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07830;old_locus_tag=LNP58_07825 NZ_CP086372.1 cmsearch ncRNA 1638459 1638533 . + . ID=rna-LNP58_RS07830;Parent=gene-LNP58_RS07830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07830;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1638459 1638533 . + . ID=exon-LNP58_RS07830-1;Parent=rna-LNP58_RS07830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07830;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1638576 1638782 . - . ID=gene-LNP58_RS07835;Name=LNP58_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07835;old_locus_tag=LNP58_07830 NZ_CP086372.1 Protein Homology CDS 1638576 1638782 . - 0 ID=cds-WP_011407316.1;Parent=gene-LNP58_RS07835;Dbxref=Genbank:WP_011407316.1;Name=WP_011407316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154992.1;locus_tag=LNP58_RS07835;product=hypothetical protein;protein_id=WP_011407316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1638990 1639379 . - . ID=gene-LNP58_RS07840;Name=LNP58_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07840;old_locus_tag=LNP58_07835 NZ_CP086372.1 Protein Homology CDS 1638990 1639379 . - 0 ID=cds-WP_011257241.1;Parent=gene-LNP58_RS07840;Dbxref=Genbank:WP_011257241.1;Name=WP_011257241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571430.1;locus_tag=LNP58_RS07840;product=YchJ family protein;protein_id=WP_011257241.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1639494 1640448 . - . ID=gene-LNP58_RS07845;Name=LNP58_RS07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07845;old_locus_tag=LNP58_07840;pseudo=true NZ_CP086372.1 Protein Homology CDS 1639494 1640448 . - 0 ID=cds-LNP58_RS07845;Parent=gene-LNP58_RS07845;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS07845;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1640726 1641694 . - . ID=gene-LNP58_RS07850;Name=LNP58_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07850;old_locus_tag=LNP58_07845 NZ_CP086372.1 Protein Homology CDS 1640726 1641694 . - 0 ID=cds-WP_011258529.1-2;Parent=gene-LNP58_RS07850;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS07850;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1641863 1642993 . - . ID=gene-LNP58_RS07855;Name=LNP58_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07855;old_locus_tag=LNP58_07850 NZ_CP086372.1 Protein Homology CDS 1641863 1642993 . - 0 ID=cds-WP_011257239.1;Parent=gene-LNP58_RS07855;Dbxref=Genbank:WP_011257239.1;Name=WP_011257239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163756.1;locus_tag=LNP58_RS07855;product=glycoside hydrolase family 5 protein;protein_id=WP_011257239.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1643560 1643636 . + . ID=gene-LNP58_RS07860;Name=LNP58_RS07860;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS07860;old_locus_tag=LNP58_07855 NZ_CP086372.1 cmsearch ncRNA 1643560 1643636 . + . ID=rna-LNP58_RS07860;Parent=gene-LNP58_RS07860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07860;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1643560 1643636 . + . ID=exon-LNP58_RS07860-1;Parent=rna-LNP58_RS07860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS07860;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1643641 1644693 . - . ID=gene-LNP58_RS07865;Name=LNP58_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07865;old_locus_tag=LNP58_07860 NZ_CP086372.1 Protein Homology CDS 1643641 1644693 . - 0 ID=cds-WP_011257238.1;Parent=gene-LNP58_RS07865;Dbxref=Genbank:WP_011257238.1;Name=WP_011257238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375107.1;locus_tag=LNP58_RS07865;product=glycoside hydrolase family 5 protein;protein_id=WP_011257238.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1644813 1645006 . - . ID=gene-LNP58_RS07870;Name=LNP58_RS07870;end_range=1645006,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07870;old_locus_tag=LNP58_07865;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1644813 1645006 . - 0 ID=cds-LNP58_RS07870;Parent=gene-LNP58_RS07870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1645006,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154987.1;locus_tag=LNP58_RS07870;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1645456 1646529 . - . ID=gene-LNP58_RS07875;Name=LNP58_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07875;old_locus_tag=LNP58_07870 NZ_CP086372.1 Protein Homology CDS 1645456 1646529 . - 0 ID=cds-WP_011257237.1;Parent=gene-LNP58_RS07875;Dbxref=Genbank:WP_011257237.1;Name=WP_011257237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345792.1;locus_tag=LNP58_RS07875;product=glycoside hydrolase family 5 protein;protein_id=WP_011257237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1646837 1647895 . + . ID=gene-LNP58_RS07880;Name=LNP58_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07880;old_locus_tag=LNP58_07875 NZ_CP086372.1 Protein Homology CDS 1646837 1647895 . + 0 ID=cds-WP_011407313.1;Parent=gene-LNP58_RS07880;Dbxref=Genbank:WP_011407313.1;Name=WP_011407313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851500.1;locus_tag=LNP58_RS07880;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_011407313.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1648064 1649024 . - . ID=gene-LNP58_RS07885;Name=LNP58_RS07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07885;old_locus_tag=LNP58_07880;pseudo=true NZ_CP086372.1 Protein Homology CDS 1648064 1649024 . - 0 ID=cds-LNP58_RS07885;Parent=gene-LNP58_RS07885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS07885;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1649149 1649316 . + . ID=gene-LNP58_RS07890;Name=LNP58_RS07890;end_range=1649316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07890;old_locus_tag=LNP58_07885;partial=true;pseudo=true;start_range=.,1649149 NZ_CP086372.1 Protein Homology CDS 1649149 1649316 . + 0 ID=cds-LNP58_RS07890;Parent=gene-LNP58_RS07890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1649316,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS07890;partial=true;product=transposase;pseudo=true;start_range=.,1649149;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1649378 1650563 . - . ID=gene-LNP58_RS07895;Name=LNP58_RS07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07895;old_locus_tag=LNP58_07890;pseudo=true NZ_CP086372.1 Protein Homology CDS 1649378 1650563 . - 0 ID=cds-LNP58_RS07895;Parent=gene-LNP58_RS07895;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS07895;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1650711 1651244 . + . ID=gene-LNP58_RS07900;Name=LNP58_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07900;old_locus_tag=LNP58_07895 NZ_CP086372.1 Protein Homology CDS 1650711 1651244 . + 0 ID=cds-WP_011257232.1;Parent=gene-LNP58_RS07900;Dbxref=Genbank:WP_011257232.1;Name=WP_011257232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155196.1;locus_tag=LNP58_RS07900;product=lipocalin family protein;protein_id=WP_011257232.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1651302 1651468 . - . ID=gene-LNP58_RS07905;Name=LNP58_RS07905;end_range=1651468,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07905;old_locus_tag=LNP58_07900;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1651302 1651468 . - 0 ID=cds-LNP58_RS07905;Parent=gene-LNP58_RS07905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1651468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155195.1;locus_tag=LNP58_RS07905;partial=true;product=ribonuclease E inhibitor RraB;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1651586 1652182 . + . ID=gene-LNP58_RS07910;Name=LNP58_RS07910;end_range=1652182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07910;old_locus_tag=LNP58_07905;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1651586 1652182 . + 0 ID=cds-LNP58_RS07910;Parent=gene-LNP58_RS07910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1652182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS07910;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1652181 1652387 . + . ID=gene-LNP58_RS07915;Name=LNP58_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07915;old_locus_tag=LNP58_07910;partial=true;pseudo=true;start_range=.,1652181 NZ_CP086372.1 Protein Homology CDS 1652181 1652387 . + 0 ID=cds-LNP58_RS07915;Parent=gene-LNP58_RS07915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS07915;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1652181;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1652393 1653989 . - . ID=gene-LNP58_RS07920;Name=LNP58_RS07920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07920;old_locus_tag=LNP58_07915;partial=true;pseudo=true;start_range=.,1652393 NZ_CP086372.1 Protein Homology CDS 1652393 1653989 . - 0 ID=cds-LNP58_RS07920;Parent=gene-LNP58_RS07920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157370.1;locus_tag=LNP58_RS07920;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,1652393;transl_table=11 NZ_CP086372.1 RefSeq gene 1654280 1654762 . - . ID=gene-LNP58_RS07925;Name=LNP58_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07925;old_locus_tag=LNP58_07920 NZ_CP086372.1 Protein Homology CDS 1654280 1654762 . - 0 ID=cds-WP_011407307.1;Parent=gene-LNP58_RS07925;Dbxref=Genbank:WP_011407307.1;Name=WP_011407307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912138.1;locus_tag=LNP58_RS07925;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011407307.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1654890 1655780 . + . ID=gene-LNP58_RS07930;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=LNP58_RS07930;old_locus_tag=LNP58_07925 NZ_CP086372.1 Protein Homology CDS 1654890 1655780 . + 0 ID=cds-WP_011257227.1;Parent=gene-LNP58_RS07930;Dbxref=Genbank:WP_011257227.1;Name=WP_011257227.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158567.1;locus_tag=LNP58_RS07930;product=phenylalanine 4-monooxygenase;protein_id=WP_011257227.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1655921 1656565 . + . ID=gene-LNP58_RS07935;Name=LNP58_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07935;old_locus_tag=LNP58_07930 NZ_CP086372.1 Protein Homology CDS 1655921 1656565 . + 0 ID=cds-WP_011257226.1;Parent=gene-LNP58_RS07935;Dbxref=Genbank:WP_011257226.1;Name=WP_011257226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=LNP58_RS07935;product=DUF4375 domain-containing protein;protein_id=WP_011257226.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1656787 1657630 . - . ID=gene-LNP58_RS07940;Name=LNP58_RS07940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07940;old_locus_tag=LNP58_07935;pseudo=true NZ_CP086372.1 Protein Homology CDS 1656787 1657630 . - 0 ID=cds-LNP58_RS07940;Parent=gene-LNP58_RS07940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345892.1;locus_tag=LNP58_RS07940;product=GDSL-type esterase/lipase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1657995 1658537 . - . ID=gene-LNP58_RS07945;Name=LNP58_RS07945;end_range=1658537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07945;old_locus_tag=LNP58_07940;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1657995 1658537 . - 0 ID=cds-LNP58_RS07945;Parent=gene-LNP58_RS07945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1658537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436974.1;locus_tag=LNP58_RS07945;partial=true;product=RpiB/LacA/LacB family sugar-phosphate isomerase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1658571 1659613 . - . ID=gene-LNP58_RS07950;Name=LNP58_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07950;old_locus_tag=LNP58_07945;pseudo=true NZ_CP086372.1 Protein Homology CDS 1658571 1659613 . - 0 ID=cds-LNP58_RS07950;Parent=gene-LNP58_RS07950;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS07950;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1659740 1660054 . - . ID=gene-LNP58_RS07955;Name=LNP58_RS07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07955;old_locus_tag=LNP58_07950;partial=true;pseudo=true;start_range=.,1659740 NZ_CP086372.1 Protein Homology CDS 1659740 1660054 . - 0 ID=cds-LNP58_RS07955;Parent=gene-LNP58_RS07955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573822.1;locus_tag=LNP58_RS07955;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1659740;transl_table=11 NZ_CP086372.1 RefSeq gene 1660207 1660410 . + . ID=gene-LNP58_RS07960;Name=LNP58_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07960;old_locus_tag=LNP58_07955 NZ_CP086372.1 Protein Homology CDS 1660207 1660410 . + 0 ID=cds-WP_008573820.1;Parent=gene-LNP58_RS07960;Dbxref=Genbank:WP_008573820.1;Name=WP_008573820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573820.1;locus_tag=LNP58_RS07960;product=YdcH family protein;protein_id=WP_008573820.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1661049 1662029 . - . ID=gene-LNP58_RS07965;Name=LNP58_RS07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS07965;old_locus_tag=LNP58_07960;pseudo=true NZ_CP086372.1 Protein Homology CDS 1661049 1662029 . - 0 ID=cds-LNP58_RS07965;Parent=gene-LNP58_RS07965;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932469.1;locus_tag=LNP58_RS07965;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1662229 1664889 . - . ID=gene-LNP58_RS07970;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LNP58_RS07970;old_locus_tag=LNP58_07965 NZ_CP086372.1 Protein Homology CDS 1662229 1664889 . - 0 ID=cds-WP_011257221.1;Parent=gene-LNP58_RS07970;Dbxref=Genbank:WP_011257221.1;Name=WP_011257221.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257221.1;locus_tag=LNP58_RS07970;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_011257221.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1664889 1665854 . - . ID=gene-LNP58_RS07975;Name=LNP58_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07975;old_locus_tag=LNP58_07970 NZ_CP086372.1 Protein Homology CDS 1664889 1665854 . - 0 ID=cds-WP_011407301.1;Parent=gene-LNP58_RS07975;Dbxref=Genbank:WP_011407301.1;Name=WP_011407301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377011.1;locus_tag=LNP58_RS07975;product=hypothetical protein;protein_id=WP_011407301.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1665853 1666098 . + . ID=gene-LNP58_RS07980;Name=LNP58_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07980;old_locus_tag=LNP58_07975 NZ_CP086372.1 GeneMarkS-2+ CDS 1665853 1666098 . + 0 ID=cds-WP_075240491.1;Parent=gene-LNP58_RS07980;Dbxref=Genbank:WP_075240491.1;Name=WP_075240491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS07980;product=hypothetical protein;protein_id=WP_075240491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1666267 1667319 . + . ID=gene-LNP58_RS07985;Name=LNP58_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07985;old_locus_tag=LNP58_07980 NZ_CP086372.1 Protein Homology CDS 1666267 1667319 . + 0 ID=cds-WP_011257219.1;Parent=gene-LNP58_RS07985;Dbxref=Genbank:WP_011257219.1;Name=WP_011257219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505331.1;locus_tag=LNP58_RS07985;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011257219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1667484 1670522 . + . ID=gene-LNP58_RS07990;Name=LNP58_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07990;old_locus_tag=LNP58_07985 NZ_CP086372.1 Protein Homology CDS 1667484 1670522 . + 0 ID=cds-WP_011257218.1;Parent=gene-LNP58_RS07990;Dbxref=Genbank:WP_011257218.1;Name=WP_011257218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171975.1;locus_tag=LNP58_RS07990;product=TonB-dependent receptor;protein_id=WP_011257218.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1670821 1673853 . + . ID=gene-LNP58_RS07995;Name=LNP58_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS07995;old_locus_tag=LNP58_07990 NZ_CP086372.1 Protein Homology CDS 1670821 1673853 . + 0 ID=cds-WP_011407300.1;Parent=gene-LNP58_RS07995;Dbxref=Genbank:WP_011407300.1;Name=WP_011407300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171731.1;locus_tag=LNP58_RS07995;product=TonB-dependent receptor;protein_id=WP_011407300.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1673963 1675492 . + . ID=gene-LNP58_RS08000;Name=LNP58_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08000;old_locus_tag=LNP58_07995 NZ_CP086372.1 Protein Homology CDS 1673963 1675492 . + 0 ID=cds-WP_011257216.1;Parent=gene-LNP58_RS08000;Dbxref=Genbank:WP_011257216.1;Name=WP_011257216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443718.1;locus_tag=LNP58_RS08000;product=tryptophan 7-halogenase;protein_id=WP_011257216.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1675846 1676577 . - . ID=gene-LNP58_RS08005;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LNP58_RS08005;old_locus_tag=LNP58_08000 NZ_CP086372.1 Protein Homology CDS 1675846 1676577 . - 0 ID=cds-WP_011257215.1;Parent=gene-LNP58_RS08005;Dbxref=Genbank:WP_011257215.1;Name=WP_011257215.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505335.1;locus_tag=LNP58_RS08005;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_011257215.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1676574 1677533 . - . ID=gene-LNP58_RS08010;Name=LNP58_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08010;old_locus_tag=LNP58_08005 NZ_CP086372.1 Protein Homology CDS 1676574 1677533 . - 0 ID=cds-WP_205412093.1;Parent=gene-LNP58_RS08010;Dbxref=Genbank:WP_205412093.1;Name=WP_205412093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159717.1;locus_tag=LNP58_RS08010;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_205412093.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1677871 1678536 . + . ID=gene-LNP58_RS08015;Name=LNP58_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08015;old_locus_tag=LNP58_08010 NZ_CP086372.1 Protein Homology CDS 1677871 1678536 . + 0 ID=cds-WP_011407298.1;Parent=gene-LNP58_RS08015;Dbxref=Genbank:WP_011407298.1;Name=WP_011407298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374589.1;locus_tag=LNP58_RS08015;product=YceH family protein;protein_id=WP_011407298.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1678839 1679423 . - . ID=gene-LNP58_RS08020;Name=LNP58_RS08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08020;old_locus_tag=LNP58_08015;partial=true;pseudo=true;start_range=.,1678839 NZ_CP086372.1 Protein Homology CDS 1678839 1679423 . - 0 ID=cds-LNP58_RS08020;Parent=gene-LNP58_RS08020;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155171.1;locus_tag=LNP58_RS08020;partial=true;product=DUF4272 domain-containing protein;pseudo=true;start_range=.,1678839;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1679544 1679845 . - . ID=gene-LNP58_RS08025;Name=LNP58_RS08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08025;old_locus_tag=LNP58_08020;partial=true;pseudo=true;start_range=.,1679544 NZ_CP086372.1 Protein Homology CDS 1679544 1679845 . - 0 ID=cds-LNP58_RS08025;Parent=gene-LNP58_RS08025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374593.1;locus_tag=LNP58_RS08025;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1679544;transl_table=11 NZ_CP086372.1 RefSeq gene 1679923 1681899 . - . ID=gene-LNP58_RS08030;Name=LNP58_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08030;old_locus_tag=LNP58_08025 NZ_CP086372.1 Protein Homology CDS 1679923 1681899 . - 0 ID=cds-WP_011257211.1;Parent=gene-LNP58_RS08030;Dbxref=Genbank:WP_011257211.1;Name=WP_011257211.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1;locus_tag=LNP58_RS08030;product=UvrD-helicase domain-containing protein;protein_id=WP_011257211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1682106 1682735 . + . ID=gene-LNP58_RS08035;Name=LNP58_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08035;old_locus_tag=LNP58_08030 NZ_CP086372.1 Protein Homology CDS 1682106 1682735 . + 0 ID=cds-WP_011257210.1;Parent=gene-LNP58_RS08035;Dbxref=Genbank:WP_011257210.1;Name=WP_011257210.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374599.1;locus_tag=LNP58_RS08035;product=thymidine kinase;protein_id=WP_011257210.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1683187 1684431 . + . ID=gene-LNP58_RS08040;Name=LNP58_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08040;old_locus_tag=LNP58_08035 NZ_CP086372.1 Protein Homology CDS 1683187 1684431 . + 0 ID=cds-WP_011407295.1;Parent=gene-LNP58_RS08040;Dbxref=Genbank:WP_011407295.1;Name=WP_011407295.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155166.1;locus_tag=LNP58_RS08040;product=GAF domain-containing protein;protein_id=WP_011407295.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1684596 1686194 . - . ID=gene-LNP58_RS08045;Name=LNP58_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08045;old_locus_tag=LNP58_08040 NZ_CP086372.1 Protein Homology CDS 1684596 1686194 . - 0 ID=cds-WP_075242275.1;Parent=gene-LNP58_RS08045;Dbxref=Genbank:WP_075242275.1;Name=WP_075242275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407294.1;locus_tag=LNP58_RS08045;product=glucan biosynthesis protein D;protein_id=WP_075242275.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1686263 1687354 . - . ID=gene-LNP58_RS08050;Name=LNP58_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08050;old_locus_tag=LNP58_08045 NZ_CP086372.1 Protein Homology CDS 1686263 1687354 . - 0 ID=cds-WP_011407293.1;Parent=gene-LNP58_RS08050;Dbxref=Genbank:WP_011407293.1;Name=WP_011407293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112451.1;locus_tag=LNP58_RS08050;product=DUF4380 domain-containing protein;protein_id=WP_011407293.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1687431 1687631 . - . ID=gene-LNP58_RS08055;Name=LNP58_RS08055;end_range=1687631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08055;old_locus_tag=LNP58_08050;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1687431 1687631 . - 0 ID=cds-LNP58_RS08055;Parent=gene-LNP58_RS08055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1687631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=LNP58_RS08055;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1687625 1688002 . + . ID=gene-LNP58_RS08060;Name=LNP58_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08060;old_locus_tag=LNP58_08055 NZ_CP086372.1 Protein Homology CDS 1687625 1688002 . + 0 ID=cds-WP_027703523.1;Parent=gene-LNP58_RS08060;Dbxref=Genbank:WP_027703523.1;Name=WP_027703523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912732.1;locus_tag=LNP58_RS08060;product=hypothetical protein;protein_id=WP_027703523.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1688166 1688927 . + . ID=gene-LNP58_RS08065;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LNP58_RS08065;old_locus_tag=LNP58_08060 NZ_CP086372.1 Protein Homology CDS 1688166 1688927 . + 0 ID=cds-WP_011407292.1;Parent=gene-LNP58_RS08065;Dbxref=Genbank:WP_011407292.1;Name=WP_011407292.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=LNP58_RS08065;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_011407292.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1688972 1689754 . + . ID=gene-LNP58_RS08070;Name=LNP58_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08070;old_locus_tag=LNP58_08065 NZ_CP086372.1 Protein Homology CDS 1688972 1689754 . + 0 ID=cds-WP_011257203.1;Parent=gene-LNP58_RS08070;Dbxref=Genbank:WP_011257203.1;Name=WP_011257203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509285.1;locus_tag=LNP58_RS08070;product=SDR family oxidoreductase;protein_id=WP_011257203.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1689818 1690702 . + . ID=gene-LNP58_RS08075;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LNP58_RS08075;old_locus_tag=LNP58_08070 NZ_CP086372.1 Protein Homology CDS 1689818 1690702 . + 0 ID=cds-WP_011257202.1;Parent=gene-LNP58_RS08075;Dbxref=Genbank:WP_011257202.1;Name=WP_011257202.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485708.1;locus_tag=LNP58_RS08075;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_011257202.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1690951 1691856 . + . ID=gene-LNP58_RS08080;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=LNP58_RS08080;old_locus_tag=LNP58_08075 NZ_CP086372.1 Protein Homology CDS 1690951 1691856 . + 0 ID=cds-WP_012443706.1;Parent=gene-LNP58_RS08080;Dbxref=Genbank:WP_012443706.1;Name=WP_012443706.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443706.1;locus_tag=LNP58_RS08080;product=lipid A hydroxylase LpxO;protein_id=WP_012443706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1692109 1692528 . - . ID=gene-LNP58_RS08085;Name=LNP58_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08085;old_locus_tag=LNP58_08080 NZ_CP086372.1 Protein Homology CDS 1692109 1692528 . - 0 ID=cds-WP_011257200.1;Parent=gene-LNP58_RS08085;Dbxref=Genbank:WP_011257200.1;Name=WP_011257200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903249.1;locus_tag=LNP58_RS08085;product=nuclear transport factor 2 family protein;protein_id=WP_011257200.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1692571 1693188 . - . ID=gene-LNP58_RS08090;Name=LNP58_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08090;old_locus_tag=LNP58_08085 NZ_CP086372.1 Protein Homology CDS 1692571 1693188 . - 0 ID=cds-WP_044756223.1;Parent=gene-LNP58_RS08090;Dbxref=Genbank:WP_044756223.1;Name=WP_044756223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912742.1;locus_tag=LNP58_RS08090;product=YdcF family protein;protein_id=WP_044756223.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1693173 1694132 . - . ID=gene-LNP58_RS08095;Name=LNP58_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08095;old_locus_tag=LNP58_08090 NZ_CP086372.1 Protein Homology CDS 1693173 1694132 . - 0 ID=cds-WP_011257199.1;Parent=gene-LNP58_RS08095;Dbxref=Genbank:WP_011257199.1;Name=WP_011257199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920032.1;locus_tag=LNP58_RS08095;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_011257199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1694290 1694757 . + . ID=gene-LNP58_RS08100;Name=LNP58_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08100;old_locus_tag=LNP58_08095 NZ_CP086372.1 Protein Homology CDS 1694290 1694757 . + 0 ID=cds-WP_044756221.1;Parent=gene-LNP58_RS08100;Dbxref=Genbank:WP_044756221.1;Name=WP_044756221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171656.1;locus_tag=LNP58_RS08100;product=hypothetical protein;protein_id=WP_044756221.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1694891 1695070 . + . ID=gene-LNP58_RS08105;Name=LNP58_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08105;old_locus_tag=LNP58_08100 NZ_CP086372.1 Protein Homology CDS 1694891 1695070 . + 0 ID=cds-WP_075239321.1;Parent=gene-LNP58_RS08105;Dbxref=Genbank:WP_075239321.1;Name=WP_075239321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485698.1;locus_tag=LNP58_RS08105;product=hypothetical protein;protein_id=WP_075239321.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1695331 1697235 . + . ID=gene-LNP58_RS08110;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LNP58_RS08110;old_locus_tag=LNP58_08105 NZ_CP086372.1 Protein Homology CDS 1695331 1697235 . + 0 ID=cds-WP_012443704.1;Parent=gene-LNP58_RS08110;Dbxref=Genbank:WP_012443704.1;Name=WP_012443704.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1;locus_tag=LNP58_RS08110;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_012443704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1697355 1697636 . - . ID=gene-LNP58_RS08115;Name=LNP58_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08115;old_locus_tag=LNP58_08110 NZ_CP086372.1 Protein Homology CDS 1697355 1697636 . - 0 ID=cds-WP_229001926.1;Parent=gene-LNP58_RS08115;Dbxref=Genbank:WP_229001926.1;Name=WP_229001926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=LNP58_RS08115;product=hypothetical protein;protein_id=WP_229001926.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1697626 1697772 . - . ID=gene-LNP58_RS08120;Name=LNP58_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08120;old_locus_tag=LNP58_08115 NZ_CP086372.1 Protein Homology CDS 1697626 1697772 . - 0 ID=cds-WP_012443701.1;Parent=gene-LNP58_RS08120;Dbxref=Genbank:WP_012443701.1;Name=WP_012443701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504125.1;locus_tag=LNP58_RS08120;product=membrane protein;protein_id=WP_012443701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1697769 1699457 . - . ID=gene-LNP58_RS08125;Name=LNP58_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08125;old_locus_tag=LNP58_08120 NZ_CP086372.1 Protein Homology CDS 1697769 1699457 . - 0 ID=cds-WP_011257197.1;Parent=gene-LNP58_RS08125;Dbxref=Genbank:WP_011257197.1;Name=WP_011257197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257197.1;locus_tag=LNP58_RS08125;product=DUF2875 family protein;protein_id=WP_011257197.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1699454 1701655 . - . ID=gene-LNP58_RS08130;Name=LNP58_RS08130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08130;old_locus_tag=LNP58_08125;pseudo=true NZ_CP086372.1 Protein Homology CDS 1699454 1701655 . - 0 ID=cds-LNP58_RS08130;Parent=gene-LNP58_RS08130;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257196.1;locus_tag=LNP58_RS08130;product=DUF3274 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1701717 1701980 . - . ID=gene-LNP58_RS08135;Name=LNP58_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08135;old_locus_tag=LNP58_08130 NZ_CP086372.1 Protein Homology CDS 1701717 1701980 . - 0 ID=cds-WP_041181914.1;Parent=gene-LNP58_RS08135;Dbxref=Genbank:WP_041181914.1;Name=WP_041181914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303179.1;locus_tag=LNP58_RS08135;product=PAAR domain-containing protein;protein_id=WP_041181914.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1701977 1703668 . - . ID=gene-LNP58_RS08140;Name=LNP58_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08140;old_locus_tag=LNP58_08135 NZ_CP086372.1 Protein Homology CDS 1701977 1703668 . - 0 ID=cds-WP_011257195.1;Parent=gene-LNP58_RS08140;Dbxref=Genbank:WP_011257195.1;Name=WP_011257195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257195.1;locus_tag=LNP58_RS08140;product=DUF2875 family protein;protein_id=WP_011257195.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1703665 1705818 . - . ID=gene-LNP58_RS08145;Name=LNP58_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08145;old_locus_tag=LNP58_08140 NZ_CP086372.1 Protein Homology CDS 1703665 1705818 . - 0 ID=cds-WP_041182356.1;Parent=gene-LNP58_RS08145;Dbxref=Genbank:WP_041182356.1;Name=WP_041182356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407286.1;locus_tag=LNP58_RS08145;product=DUF3274 domain-containing protein;protein_id=WP_041182356.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1705886 1708609 . - . ID=gene-LNP58_RS08150;Name=LNP58_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08150;old_locus_tag=LNP58_08145 NZ_CP086372.1 Protein Homology CDS 1705886 1708609 . - 0 ID=cds-WP_011257193.1;Parent=gene-LNP58_RS08150;Dbxref=Genbank:WP_011257193.1;Name=WP_011257193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=LNP58_RS08150;product=type VI secretion system Vgr family protein;protein_id=WP_011257193.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1709014 1710390 . - . ID=gene-LNP58_RS08155;Name=LNP58_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08155;old_locus_tag=LNP58_08150 NZ_CP086372.1 Protein Homology CDS 1709014 1710390 . - 0 ID=cds-WP_069963816.1;Parent=gene-LNP58_RS08155;Dbxref=Genbank:WP_069963816.1;Name=WP_069963816.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS08155;product=IS5-like element ISXoo4 family transposase;protein_id=WP_069963816.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1710963 1712849 . - . ID=gene-LNP58_RS08160;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LNP58_RS08160;old_locus_tag=LNP58_08155 NZ_CP086372.1 Protein Homology CDS 1710963 1712849 . - 0 ID=cds-WP_011257191.1;Parent=gene-LNP58_RS08160;Dbxref=Genbank:WP_011257191.1;Name=WP_011257191.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038943.1;locus_tag=LNP58_RS08160;product=arginine decarboxylase;protein_id=WP_011257191.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1713087 1713944 . + . ID=gene-LNP58_RS08165;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LNP58_RS08165;old_locus_tag=LNP58_08160 NZ_CP086372.1 Protein Homology CDS 1713087 1713944 . + 0 ID=cds-WP_011257190.1;Parent=gene-LNP58_RS08165;Dbxref=Genbank:WP_011257190.1;Name=WP_011257190.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305070.1;locus_tag=LNP58_RS08165;product=polyamine aminopropyltransferase;protein_id=WP_011257190.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1714361 1714972 . - . ID=gene-LNP58_RS08170;Name=LNP58_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08170;old_locus_tag=LNP58_08165 NZ_CP086372.1 Protein Homology CDS 1714361 1714972 . - 0 ID=cds-WP_011257189.1;Parent=gene-LNP58_RS08170;Dbxref=Genbank:WP_011257189.1;Name=WP_011257189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305069.1;locus_tag=LNP58_RS08170;product=PH domain-containing protein;protein_id=WP_011257189.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1715165 1715977 . - . ID=gene-LNP58_RS08175;Name=LNP58_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08175;old_locus_tag=LNP58_08170 NZ_CP086372.1 Protein Homology CDS 1715165 1715977 . - 0 ID=cds-WP_075242268.1;Parent=gene-LNP58_RS08175;Dbxref=Genbank:WP_075242268.1;Name=WP_075242268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171970.1;locus_tag=LNP58_RS08175;product=outer membrane beta-barrel protein;protein_id=WP_075242268.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1716535 1716771 . + . ID=gene-LNP58_RS08180;Name=LNP58_RS08180;end_range=1716771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08180;old_locus_tag=LNP58_08175;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1716535 1716771 . + 0 ID=cds-LNP58_RS08180;Parent=gene-LNP58_RS08180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1716771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156740.1;locus_tag=LNP58_RS08180;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1716764 1716840 . + . ID=gene-LNP58_RS08185;Name=LNP58_RS08185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS08185;old_locus_tag=LNP58_08180 NZ_CP086372.1 cmsearch ncRNA 1716764 1716840 . + . ID=rna-LNP58_RS08185;Parent=gene-LNP58_RS08185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08185;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1716764 1716840 . + . ID=exon-LNP58_RS08185-1;Parent=rna-LNP58_RS08185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08185;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1716897 1718882 . - . ID=gene-LNP58_RS08190;Name=LNP58_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08190;old_locus_tag=LNP58_08185 NZ_CP086372.1 Protein Homology CDS 1716897 1718882 . - 0 ID=cds-WP_011407279.1;Parent=gene-LNP58_RS08190;Dbxref=Genbank:WP_011407279.1;Name=WP_011407279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471473.1;locus_tag=LNP58_RS08190;product=beta-N-acetylglucosaminidase domain-containing protein;protein_id=WP_011407279.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1719495 1719833 . - . ID=gene-LNP58_RS08195;Name=LNP58_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08195;old_locus_tag=LNP58_08190 NZ_CP086372.1 Protein Homology CDS 1719495 1719833 . - 0 ID=cds-WP_011257186.1;Parent=gene-LNP58_RS08195;Dbxref=Genbank:WP_011257186.1;Name=WP_011257186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1;locus_tag=LNP58_RS08195;product=P-II family nitrogen regulator;protein_id=WP_011257186.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1720023 1720301 . + . ID=gene-LNP58_RS08200;Name=LNP58_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08200;old_locus_tag=LNP58_08195 NZ_CP086372.1 Protein Homology CDS 1720023 1720301 . + 0 ID=cds-WP_011257185.1;Parent=gene-LNP58_RS08200;Dbxref=Genbank:WP_011257185.1;Name=WP_011257185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156738.1;locus_tag=LNP58_RS08200;product=accessory factor UbiK family protein;protein_id=WP_011257185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1720318 1721838 . + . ID=gene-LNP58_RS08205;Name=LNP58_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08205;old_locus_tag=LNP58_08200 NZ_CP086372.1 Protein Homology CDS 1720318 1721838 . + 0 ID=cds-WP_011257184.1;Parent=gene-LNP58_RS08205;Dbxref=Genbank:WP_011257184.1;Name=WP_011257184.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989245.1;locus_tag=LNP58_RS08205;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_011257184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1721995 1723314 . - . ID=gene-LNP58_RS08210;Name=LNP58_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08210;old_locus_tag=LNP58_08205 NZ_CP086372.1 Protein Homology CDS 1721995 1723314 . - 0 ID=cds-WP_011407278.1;Parent=gene-LNP58_RS08210;Dbxref=Genbank:WP_011407278.1;Name=WP_011407278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08210;product=IS701-like element ISXo15 family transposase;protein_id=WP_011407278.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1723409 1724785 . - . ID=gene-LNP58_RS08215;Name=LNP58_RS08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08215;old_locus_tag=LNP58_08210;pseudo=true NZ_CP086372.1 Protein Homology CDS 1723409 1724785 . - 0 ID=cds-LNP58_RS08215;Parent=gene-LNP58_RS08215;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS08215;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1724924 1725964 . - . ID=gene-LNP58_RS08220;Name=LNP58_RS08220;end_range=1725964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08220;old_locus_tag=LNP58_08215;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1724924 1725964 . - 0 ID=cds-LNP58_RS08220;Parent=gene-LNP58_RS08220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1725964,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS08220;partial=true;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1726053 1726502 . + . ID=gene-LNP58_RS08225;Name=LNP58_RS08225;end_range=1726502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08225;old_locus_tag=LNP58_08220;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1726053 1726502 . + 0 ID=cds-LNP58_RS08225;Parent=gene-LNP58_RS08225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1726502,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043745823.1;locus_tag=LNP58_RS08225;partial=true;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1726532 1727533 . - . ID=gene-LNP58_RS08230;Name=LNP58_RS08230;end_range=1727533,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08230;old_locus_tag=LNP58_08225;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1726532 1727533 . - 0 ID=cds-LNP58_RS08230;Parent=gene-LNP58_RS08230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1727533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS08230;partial=true;product=IS256-like element IS1113 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1727540 1728506 . - . ID=gene-LNP58_RS08235;Name=LNP58_RS08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08235;old_locus_tag=LNP58_08230;pseudo=true NZ_CP086372.1 Protein Homology CDS 1727540 1728506 . - 0 ID=cds-LNP58_RS08235;Parent=gene-LNP58_RS08235;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08235;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1728595 1728783 . - . ID=gene-LNP58_RS08240;Name=LNP58_RS08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08240;old_locus_tag=LNP58_08235;partial=true;pseudo=true;start_range=.,1728595 NZ_CP086372.1 Protein Homology CDS 1728595 1728783 . - 0 ID=cds-LNP58_RS08240;Parent=gene-LNP58_RS08240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS08240;partial=true;product=transposase;pseudo=true;start_range=.,1728595;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1728872 1729699 . + . ID=gene-LNP58_RS08245;Name=LNP58_RS08245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08245;old_locus_tag=LNP58_08240;partial=true;pseudo=true;start_range=.,1728872 NZ_CP086372.1 Protein Homology CDS 1728872 1729699 . + 0 ID=cds-LNP58_RS08245;Parent=gene-LNP58_RS08245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS08245;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1728872;transl_table=11 NZ_CP086372.1 RefSeq gene 1730459 1733575 . + . ID=gene-LNP58_RS08250;Name=LNP58_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08250;old_locus_tag=LNP58_08245 NZ_CP086372.1 Protein Homology CDS 1730459 1733575 . + 0 ID=cds-WP_011407268.1;Parent=gene-LNP58_RS08250;Dbxref=Genbank:WP_011407268.1;Name=WP_011407268.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574465.1;locus_tag=LNP58_RS08250;product=DUF3416 domain-containing protein;protein_id=WP_011407268.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1733572 1736922 . + . ID=gene-LNP58_RS08255;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LNP58_RS08255;old_locus_tag=LNP58_08250 NZ_CP086372.1 Protein Homology CDS 1733572 1736922 . + 0 ID=cds-WP_011407267.1;Parent=gene-LNP58_RS08255;Dbxref=Genbank:WP_011407267.1;Name=WP_011407267.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501461.1;locus_tag=LNP58_RS08255;product=maltose alpha-D-glucosyltransferase;protein_id=WP_011407267.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1736934 1739117 . + . ID=gene-LNP58_RS08260;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LNP58_RS08260;old_locus_tag=LNP58_08255 NZ_CP086372.1 Protein Homology CDS 1736934 1739117 . + 0 ID=cds-WP_042464354.1;Parent=gene-LNP58_RS08260;Dbxref=Genbank:WP_042464354.1;Name=WP_042464354.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302960.1;locus_tag=LNP58_RS08260;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_042464354.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1739321 1739763 . + . ID=gene-LNP58_RS08265;Name=LNP58_RS08265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08265;old_locus_tag=LNP58_08260;pseudo=true NZ_CP086372.1 Protein Homology CDS 1739321 1739763 . + 0 ID=cds-LNP58_RS08265;Parent=gene-LNP58_RS08265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=LNP58_RS08265;product=metallophosphoesterase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1739870 1740001 . - . ID=gene-LNP58_RS08270;Name=LNP58_RS08270;end_range=1740001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08270;old_locus_tag=LNP58_08265;partial=true;pseudo=true;start_range=.,1739870 NZ_CP086372.1 Protein Homology CDS 1739870 1740001 . - 0 ID=cds-LNP58_RS08270;Parent=gene-LNP58_RS08270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1740001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912119.1;locus_tag=LNP58_RS08270;partial=true;product=carboxylesterase family protein;pseudo=true;start_range=.,1739870;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1740000 1740538 . + . ID=gene-LNP58_RS08275;Name=LNP58_RS08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08275;old_locus_tag=LNP58_08270;partial=true;pseudo=true;start_range=.,1740000 NZ_CP086372.1 Protein Homology CDS 1740000 1740538 . + 0 ID=cds-LNP58_RS08275;Parent=gene-LNP58_RS08275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345889.1;locus_tag=LNP58_RS08275;partial=true;product=xylosidase;pseudo=true;start_range=.,1740000;transl_table=11 NZ_CP086372.1 RefSeq gene 1740682 1741740 . + . ID=gene-LNP58_RS08280;Name=LNP58_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08280;old_locus_tag=LNP58_08275 NZ_CP086372.1 Protein Homology CDS 1740682 1741740 . + 0 ID=cds-WP_027703863.1;Parent=gene-LNP58_RS08280;Dbxref=Genbank:WP_027703863.1;Name=WP_027703863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158097.1;locus_tag=LNP58_RS08280;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_027703863.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1742142 1742815 . + . ID=gene-LNP58_RS08285;Name=kduI;end_range=1742815,.;gbkey=Gene;gene=kduI;gene_biotype=pseudogene;locus_tag=LNP58_RS08285;old_locus_tag=LNP58_08280;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1742142 1742815 . + 0 ID=cds-LNP58_RS08285;Parent=gene-LNP58_RS08285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0045490,GO:0008697;end_range=1742815,.;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991266.1;locus_tag=LNP58_RS08285;partial=true;product=5-dehydro-4-deoxy-D-glucuronate isomerase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1743142 1744524 . + . ID=gene-LNP58_RS08290;Name=LNP58_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08290;old_locus_tag=LNP58_08285 NZ_CP086372.1 Protein Homology CDS 1743142 1744524 . + 0 ID=cds-WP_069963815.1;Parent=gene-LNP58_RS08290;Dbxref=Genbank:WP_069963815.1;Name=WP_069963815.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS08290;product=IS5 family transposase;protein_id=WP_069963815.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1744571 1744714 . + . ID=gene-LNP58_RS08295;Name=LNP58_RS08295;end_range=1744714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08295;old_locus_tag=LNP58_08290;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1744571 1744714 . + 0 ID=cds-LNP58_RS08295;Parent=gene-LNP58_RS08295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1744714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502513.1;locus_tag=LNP58_RS08295;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1744763 1745561 . + . ID=gene-LNP58_RS08300;Name=LNP58_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08300;old_locus_tag=LNP58_08295 NZ_CP086372.1 Protein Homology CDS 1744763 1745034 . + 0 ID=cds-WP_094187801.1;Parent=gene-LNP58_RS08300;Dbxref=Genbank:WP_094187801.1;Name=WP_094187801.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS08300;product=IS5 family transposase;protein_id=WP_094187801.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1745033 1745561 . + 1 ID=cds-WP_094187801.1;Parent=gene-LNP58_RS08300;Dbxref=Genbank:WP_094187801.1;Name=WP_094187801.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS08300;product=IS5 family transposase;protein_id=WP_094187801.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1745587 1746471 . - . ID=gene-LNP58_RS08305;Name=LNP58_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08305;old_locus_tag=LNP58_08300 NZ_CP086372.1 Protein Homology CDS 1745587 1746471 . - 0 ID=cds-WP_229001927.1;Parent=gene-LNP58_RS08305;Dbxref=Genbank:WP_229001927.1;Name=WP_229001927.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS08305;product=IS4 family transposase;protein_id=WP_229001927.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1746452 1746907 . - . ID=gene-LNP58_RS08310;Name=LNP58_RS08310;end_range=1746907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08310;old_locus_tag=LNP58_08305;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1746452 1746907 . - 0 ID=cds-LNP58_RS08310;Parent=gene-LNP58_RS08310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1746907,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS08310;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1746997 1747962 . + . ID=gene-LNP58_RS08315;Name=LNP58_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08315;old_locus_tag=LNP58_08310 NZ_CP086372.1 Protein Homology CDS 1746997 1747962 . + 0 ID=cds-WP_109182058.1;Parent=gene-LNP58_RS08315;Dbxref=Genbank:WP_109182058.1;Name=WP_109182058.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08315;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182058.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1747971 1748504 . - . ID=gene-LNP58_RS08320;Name=LNP58_RS08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08320;old_locus_tag=LNP58_08315;partial=true;pseudo=true;start_range=.,1747971 NZ_CP086372.1 Protein Homology CDS 1747971 1748504 . - 0 ID=cds-LNP58_RS08320;Parent=gene-LNP58_RS08320;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS08320;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1747971;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1748583 1748957 . - . ID=gene-LNP58_RS08325;Name=LNP58_RS08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08325;old_locus_tag=LNP58_08320;partial=true;pseudo=true;start_range=.,1748583 NZ_CP086372.1 Protein Homology CDS 1748583 1748957 . - 0 ID=cds-LNP58_RS08325;Parent=gene-LNP58_RS08325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS08325;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1748583;transl_table=11 NZ_CP086372.1 RefSeq gene 1749200 1750681 . - . ID=gene-LNP58_RS08330;Name=LNP58_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08330;old_locus_tag=LNP58_08325 NZ_CP086372.1 Protein Homology CDS 1749200 1750681 . - 0 ID=cds-WP_011257163.1;Parent=gene-LNP58_RS08330;Dbxref=Genbank:WP_011257163.1;Name=WP_011257163.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912482.1;locus_tag=LNP58_RS08330;product=FAD-dependent oxidoreductase;protein_id=WP_011257163.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1750876 1755348 . - . ID=gene-LNP58_RS08335;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LNP58_RS08335;old_locus_tag=LNP58_08330 NZ_CP086372.1 Protein Homology CDS 1750876 1755348 . - 0 ID=cds-WP_011257162.1;Parent=gene-LNP58_RS08335;Dbxref=Genbank:WP_011257162.1;Name=WP_011257162.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237055.1;locus_tag=LNP58_RS08335;product=glutamate synthase large subunit;protein_id=WP_011257162.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1755550 1755930 . - . ID=gene-LNP58_RS08340;Name=LNP58_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08340;old_locus_tag=LNP58_08335 NZ_CP086372.1 Protein Homology CDS 1755550 1755930 . - 0 ID=cds-WP_011257161.1;Parent=gene-LNP58_RS08340;Dbxref=Genbank:WP_011257161.1;Name=WP_011257161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159672.1;locus_tag=LNP58_RS08340;product=I78 family peptidase inhibitor;protein_id=WP_011257161.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1755987 1757240 . + . ID=gene-LNP58_RS08345;Name=LNP58_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08345;old_locus_tag=LNP58_08340 NZ_CP086372.1 Protein Homology CDS 1755987 1757240 . + 0 ID=cds-WP_042464345.1;Parent=gene-LNP58_RS08345;Dbxref=Genbank:WP_042464345.1;Name=WP_042464345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171852.1;locus_tag=LNP58_RS08345;product=DNA topoisomerase IB;protein_id=WP_042464345.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1757500 1757805 . - . ID=gene-LNP58_RS08350;Name=LNP58_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08350;old_locus_tag=LNP58_08345 NZ_CP086372.1 Protein Homology CDS 1757500 1757805 . - 0 ID=cds-WP_011407253.1;Parent=gene-LNP58_RS08350;Dbxref=Genbank:WP_011407253.1;Name=WP_011407253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901594.1;locus_tag=LNP58_RS08350;product=hypothetical protein;protein_id=WP_011407253.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1758183 1758347 . - . ID=gene-LNP58_RS08355;Name=LNP58_RS08355;end_range=1758347,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08355;old_locus_tag=LNP58_08350;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1758183 1758347 . - 0 ID=cds-LNP58_RS08355;Parent=gene-LNP58_RS08355;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1758347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572908.1;locus_tag=LNP58_RS08355;partial=true;product=NmrA/HSCARG family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1758463 1758859 . + . ID=gene-LNP58_RS08360;Name=LNP58_RS08360;end_range=1758859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08360;old_locus_tag=LNP58_08355;partial=true;pseudo=true;start_range=.,1758463 NZ_CP086372.1 Protein Homology CDS 1758463 1758859 . + 0 ID=cds-LNP58_RS08360;Parent=gene-LNP58_RS08360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1758859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170093.1;locus_tag=LNP58_RS08360;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1758463;transl_table=11 NZ_CP086372.1 RefSeq gene 1758905 1760095 . + . ID=gene-LNP58_RS08365;Name=LNP58_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08365;old_locus_tag=LNP58_08360 NZ_CP086372.1 Protein Homology CDS 1758905 1760095 . + 0 ID=cds-WP_042465397.1;Parent=gene-LNP58_RS08365;Dbxref=Genbank:WP_042465397.1;Name=WP_042465397.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443665.1;locus_tag=LNP58_RS08365;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_042465397.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1760409 1761194 . - . ID=gene-LNP58_RS08370;Name=LNP58_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08370;old_locus_tag=LNP58_08365 NZ_CP086372.1 Protein Homology CDS 1760409 1761194 . - 0 ID=cds-WP_011257157.1;Parent=gene-LNP58_RS08370;Dbxref=Genbank:WP_011257157.1;Name=WP_011257157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158072.1;locus_tag=LNP58_RS08370;product=DUF1868 domain-containing protein;protein_id=WP_011257157.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1761205 1763862 . - . ID=gene-LNP58_RS08375;Name=LNP58_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08375;old_locus_tag=LNP58_08370 NZ_CP086372.1 Protein Homology CDS 1761205 1763862 . - 0 ID=cds-WP_011407250.1;Parent=gene-LNP58_RS08375;Dbxref=Genbank:WP_011407250.1;Name=WP_011407250.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407250.1;locus_tag=LNP58_RS08375;product=TonB-dependent receptor;protein_id=WP_011407250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1763966 1765123 . + . ID=gene-LNP58_RS08380;Name=LNP58_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08380;old_locus_tag=LNP58_08375 NZ_CP086372.1 Protein Homology CDS 1763966 1765123 . + 0 ID=cds-WP_011407249.1;Parent=gene-LNP58_RS08380;Dbxref=Genbank:WP_011407249.1;Name=WP_011407249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158073.1;locus_tag=LNP58_RS08380;product=ROK family protein;protein_id=WP_011407249.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1765314 1767458 . + . ID=gene-LNP58_RS08385;Name=avrBs2;gbkey=Gene;gene=avrBs2;gene_biotype=protein_coding;locus_tag=LNP58_RS08385;old_locus_tag=LNP58_08380 NZ_CP086372.1 Protein Homology CDS 1765314 1767458 . + 0 ID=cds-WP_011407248.1;Parent=gene-LNP58_RS08385;Dbxref=Genbank:WP_011407248.1;Name=WP_011407248.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs2;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964871.1;locus_tag=LNP58_RS08385;product=type III secretion system effector avirulence protein AvrBs2;protein_id=WP_011407248.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1767947 1769773 . - . ID=gene-LNP58_RS08390;Name=LNP58_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08390;old_locus_tag=LNP58_08385 NZ_CP086372.1 Protein Homology CDS 1767947 1769773 . - 0 ID=cds-WP_042464339.1;Parent=gene-LNP58_RS08390;Dbxref=Genbank:WP_042464339.1;Name=WP_042464339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501376.1;locus_tag=LNP58_RS08390;product=ribonuclease H-like domain-containing protein;protein_id=WP_042464339.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1769770 1772265 . - . ID=gene-LNP58_RS08395;Name=LNP58_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08395;old_locus_tag=LNP58_08390 NZ_CP086372.1 Protein Homology CDS 1769770 1772265 . - 0 ID=cds-WP_011407245.1;Parent=gene-LNP58_RS08395;Dbxref=Genbank:WP_011407245.1;Name=WP_011407245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237057.1;locus_tag=LNP58_RS08395;product=DEAD/DEAH box helicase;protein_id=WP_011407245.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1772443 1773105 . + . ID=gene-LNP58_RS08400;Name=LNP58_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08400;old_locus_tag=LNP58_08395 NZ_CP086372.1 Protein Homology CDS 1772443 1773105 . + 0 ID=cds-WP_011407244.1;Parent=gene-LNP58_RS08400;Dbxref=Genbank:WP_011407244.1;Name=WP_011407244.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158077.1;locus_tag=LNP58_RS08400;product=hemolysin III family protein;protein_id=WP_011407244.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1773172 1773402 . + . ID=gene-LNP58_RS08405;Name=LNP58_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08405;old_locus_tag=LNP58_08400 NZ_CP086372.1 Protein Homology CDS 1773172 1773402 . + 0 ID=cds-WP_011407243.1;Parent=gene-LNP58_RS08405;Dbxref=Genbank:WP_011407243.1;Name=WP_011407243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443656.1;locus_tag=LNP58_RS08405;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_011407243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1773456 1773827 . + . ID=gene-LNP58_RS08410;Name=LNP58_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08410;old_locus_tag=LNP58_08405 NZ_CP086372.1 Protein Homology CDS 1773456 1773827 . + 0 ID=cds-WP_011257150.1;Parent=gene-LNP58_RS08410;Dbxref=Genbank:WP_011257150.1;Name=WP_011257150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257150.1;locus_tag=LNP58_RS08410;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011257150.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1774280 1774531 . + . ID=gene-LNP58_RS08415;Name=LNP58_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08415;old_locus_tag=LNP58_08410 NZ_CP086372.1 Protein Homology CDS 1774280 1774531 . + 0 ID=cds-WP_027703668.1;Parent=gene-LNP58_RS08415;Dbxref=Genbank:WP_027703668.1;Name=WP_027703668.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443655.1;locus_tag=LNP58_RS08415;product=SymE family type I addiction module toxin;protein_id=WP_027703668.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1774762 1775727 . + . ID=gene-LNP58_RS08420;Name=LNP58_RS08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08420;old_locus_tag=LNP58_08415;pseudo=true NZ_CP086372.1 Protein Homology CDS 1774762 1775727 . + 0 ID=cds-LNP58_RS08420;Parent=gene-LNP58_RS08420;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08420;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1775732 1776394 . + . ID=gene-LNP58_RS08425;Name=LNP58_RS08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08425;old_locus_tag=LNP58_08420;partial=true;pseudo=true;start_range=.,1775732 NZ_CP086372.1 Protein Homology CDS 1775732 1776394 . + 0 ID=cds-LNP58_RS08425;Parent=gene-LNP58_RS08425;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS08425;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1775732;transl_table=11 NZ_CP086372.1 RefSeq gene 1776407 1777717 . - . ID=gene-LNP58_RS08430;Name=LNP58_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08430;old_locus_tag=LNP58_08425 NZ_CP086372.1 Protein Homology CDS 1776407 1777717 . - 0 ID=cds-WP_011257146.1;Parent=gene-LNP58_RS08430;Dbxref=Genbank:WP_011257146.1;Name=WP_011257146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174380.1;locus_tag=LNP58_RS08430;product=ABC transporter permease;protein_id=WP_011257146.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1777730 1778887 . - . ID=gene-LNP58_RS08435;Name=LNP58_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08435;old_locus_tag=LNP58_08430 NZ_CP086372.1 Protein Homology CDS 1777730 1778887 . - 0 ID=cds-WP_011257145.1;Parent=gene-LNP58_RS08435;Dbxref=Genbank:WP_011257145.1;Name=WP_011257145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374852.1;locus_tag=LNP58_RS08435;product=ABC transporter permease;protein_id=WP_011257145.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1778900 1779589 . - . ID=gene-LNP58_RS08440;Name=LNP58_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08440;old_locus_tag=LNP58_08435 NZ_CP086372.1 Protein Homology CDS 1778900 1779589 . - 0 ID=cds-WP_069960122.1;Parent=gene-LNP58_RS08440;Dbxref=Genbank:WP_069960122.1;Name=WP_069960122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407239.1;locus_tag=LNP58_RS08440;product=ABC transporter ATP-binding protein;protein_id=WP_069960122.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1779935 1781188 . - . ID=gene-LNP58_RS08445;Name=LNP58_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08445;old_locus_tag=LNP58_08440 NZ_CP086372.1 Protein Homology CDS 1779935 1781188 . - 0 ID=cds-WP_044756194.1;Parent=gene-LNP58_RS08445;Dbxref=Genbank:WP_044756194.1;Name=WP_044756194.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348902.1;locus_tag=LNP58_RS08445;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_044756194.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1781380 1781850 . + . ID=gene-LNP58_RS08450;Name=LNP58_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08450;old_locus_tag=LNP58_08445 NZ_CP086372.1 GeneMarkS-2+ CDS 1781380 1781850 . + 0 ID=cds-WP_044756192.1;Parent=gene-LNP58_RS08450;Dbxref=Genbank:WP_044756192.1;Name=WP_044756192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08450;product=hypothetical protein;protein_id=WP_044756192.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1781825 1782781 . - . ID=gene-LNP58_RS08455;Name=LNP58_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08455;old_locus_tag=LNP58_08450 NZ_CP086372.1 Protein Homology CDS 1781825 1782781 . - 0 ID=cds-WP_011407237.1;Parent=gene-LNP58_RS08455;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS08455;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1783069 1783150 . + . ID=gene-LNP58_RS08460;Name=LNP58_RS08460;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS08460;old_locus_tag=LNP58_08455 NZ_CP086372.1 cmsearch ncRNA 1783069 1783150 . + . ID=rna-LNP58_RS08460;Parent=gene-LNP58_RS08460;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08460;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1783069 1783150 . + . ID=exon-LNP58_RS08460-1;Parent=rna-LNP58_RS08460;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08460;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 1783234 1783562 . - . ID=gene-LNP58_RS08465;Name=LNP58_RS08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08465;old_locus_tag=LNP58_08460;pseudo=true NZ_CP086372.1 Protein Homology CDS 1783234 1783562 . - 0 ID=cds-LNP58_RS08465;Parent=gene-LNP58_RS08465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364642.1;locus_tag=LNP58_RS08465;product=thioredoxin family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1783583 1783981 . - . ID=gene-LNP58_RS08470;Name=LNP58_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08470;old_locus_tag=LNP58_08465 NZ_CP086372.1 Protein Homology CDS 1783583 1783981 . - 0 ID=cds-WP_011257041.1;Parent=gene-LNP58_RS08470;Dbxref=Genbank:WP_011257041.1;Name=WP_011257041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809798.1;locus_tag=LNP58_RS08470;product=host attachment family protein;protein_id=WP_011257041.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1784143 1784819 . - . ID=gene-LNP58_RS08475;Name=LNP58_RS08475;end_range=1784819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08475;old_locus_tag=LNP58_08470;partial=true;pseudo=true;start_range=.,1784143 NZ_CP086372.1 Protein Homology CDS 1784143 1784819 . - 0 ID=cds-LNP58_RS08475;Parent=gene-LNP58_RS08475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1784819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171597.1;locus_tag=LNP58_RS08475;partial=true;product=Zn-dependent protease with chaperone function;pseudo=true;start_range=.,1784143;transl_table=11 NZ_CP086372.1 RefSeq gene 1784935 1785405 . - . ID=gene-LNP58_RS08480;Name=LNP58_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08480;old_locus_tag=LNP58_08475 NZ_CP086372.1 Protein Homology CDS 1784935 1785405 . - 0 ID=cds-WP_027704036.1;Parent=gene-LNP58_RS08480;Dbxref=Genbank:WP_027704036.1;Name=WP_027704036.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302281.1;locus_tag=LNP58_RS08480;product=NUDIX domain-containing protein;protein_id=WP_027704036.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1785521 1785697 . + . ID=gene-LNP58_RS08485;Name=LNP58_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08485;old_locus_tag=LNP58_08480 NZ_CP086372.1 Protein Homology CDS 1785521 1785697 . + 0 ID=cds-WP_011257044.1;Parent=gene-LNP58_RS08485;Dbxref=Genbank:WP_011257044.1;Name=WP_011257044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257044.1;locus_tag=LNP58_RS08485;product=hypothetical protein;protein_id=WP_011257044.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1785808 1786875 . + . ID=gene-LNP58_RS08490;Name=LNP58_RS08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08490;old_locus_tag=LNP58_08485;pseudo=true NZ_CP086372.1 Protein Homology CDS 1785808 1786875 . + 0 ID=cds-LNP58_RS08490;Parent=gene-LNP58_RS08490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163989.1;locus_tag=LNP58_RS08490;product=M4 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1786872 1787183 . + . ID=gene-LNP58_RS08495;Name=LNP58_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08495;old_locus_tag=LNP58_08490 NZ_CP086372.1 Protein Homology CDS 1786872 1787183 . + 0 ID=cds-WP_011407233.1;Parent=gene-LNP58_RS08495;Dbxref=Genbank:WP_011407233.1;Name=WP_011407233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257045.1;locus_tag=LNP58_RS08495;product=hypothetical protein;protein_id=WP_011407233.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1787438 1788463 . - . ID=gene-LNP58_RS08500;Name=LNP58_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08500;old_locus_tag=LNP58_08495 NZ_CP086372.1 Protein Homology CDS 1787438 1788463 . - 0 ID=cds-WP_011257046.1;Parent=gene-LNP58_RS08500;Dbxref=Genbank:WP_011257046.1;Name=WP_011257046.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403835.1;locus_tag=LNP58_RS08500;product=IS30 family transposase;protein_id=WP_011257046.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1788526 1789584 . - . ID=gene-LNP58_RS08505;Name=LNP58_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08505;old_locus_tag=LNP58_08500 NZ_CP086372.1 Protein Homology CDS 1788526 1789584 . - 0 ID=cds-WP_069959669.1;Parent=gene-LNP58_RS08505;Dbxref=Genbank:WP_069959669.1;Name=WP_069959669.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=LNP58_RS08505;product=IS630 family transposase;protein_id=WP_069959669.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1789723 1790004 . + . ID=gene-LNP58_RS08510;Name=LNP58_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08510;old_locus_tag=LNP58_08505 NZ_CP086372.1 Protein Homology CDS 1789723 1790004 . + 0 ID=cds-WP_011257048.1;Parent=gene-LNP58_RS08510;Dbxref=Genbank:WP_011257048.1;Name=WP_011257048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257048.1;locus_tag=LNP58_RS08510;product=hypothetical protein;protein_id=WP_011257048.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1790057 1790317 . + . ID=gene-LNP58_RS08515;Name=LNP58_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08515;old_locus_tag=LNP58_08510 NZ_CP086372.1 Protein Homology CDS 1790057 1790317 . + 0 ID=cds-WP_011407230.1;Parent=gene-LNP58_RS08515;Dbxref=Genbank:WP_011407230.1;Name=WP_011407230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443586.1;locus_tag=LNP58_RS08515;product=hypothetical protein;protein_id=WP_011407230.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1790385 1790594 . + . ID=gene-LNP58_RS08520;Name=LNP58_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08520;old_locus_tag=LNP58_08515 NZ_CP086372.1 GeneMarkS-2+ CDS 1790385 1790594 . + 0 ID=cds-WP_143699970.1;Parent=gene-LNP58_RS08520;Dbxref=Genbank:WP_143699970.1;Name=WP_143699970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08520;product=hypothetical protein;protein_id=WP_143699970.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1790708 1791658 . - . ID=gene-LNP58_RS08525;Name=LNP58_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08525;old_locus_tag=LNP58_08520 NZ_CP086372.1 Protein Homology CDS 1790708 1791658 . - 0 ID=cds-WP_069959667.1;Parent=gene-LNP58_RS08525;Dbxref=Genbank:WP_069959667.1;Name=WP_069959667.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407229.1;locus_tag=LNP58_RS08525;product=IS5 family transposase;protein_id=WP_069959667.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1791724 1792164 . + . ID=gene-LNP58_RS08530;Name=LNP58_RS08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08530;old_locus_tag=LNP58_08525;partial=true;pseudo=true;start_range=.,1791724 NZ_CP086372.1 Protein Homology CDS 1791724 1792164 . + 0 ID=cds-LNP58_RS08530;Parent=gene-LNP58_RS08530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158206.1;locus_tag=LNP58_RS08530;partial=true;product=DUF4142 domain-containing protein;pseudo=true;start_range=.,1791724;transl_table=11 NZ_CP086372.1 RefSeq gene 1792365 1793252 . + . ID=gene-LNP58_RS08535;Name=LNP58_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08535;old_locus_tag=LNP58_08530 NZ_CP086372.1 Protein Homology CDS 1792365 1793252 . + 0 ID=cds-WP_011257052.1;Parent=gene-LNP58_RS08535;Dbxref=Genbank:WP_011257052.1;Name=WP_011257052.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159091.1;locus_tag=LNP58_RS08535;product=TIGR01777 family oxidoreductase;protein_id=WP_011257052.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1793400 1793492 . + . ID=gene-LNP58_RS08540;Name=LNP58_RS08540;end_range=1793492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08540;old_locus_tag=LNP58_08535;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1793400 1793492 . + 0 ID=cds-LNP58_RS08540;Parent=gene-LNP58_RS08540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1793492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091309.1;locus_tag=LNP58_RS08540;partial=true;product=DNA-binding response regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1793516 1793713 . + . ID=gene-LNP58_RS08545;Name=LNP58_RS08545;end_range=1793713,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08545;old_locus_tag=LNP58_08540;partial=true;pseudo=true;start_range=.,1793516 NZ_CP086372.1 Protein Homology CDS 1793516 1793713 . + 0 ID=cds-LNP58_RS08545;Parent=gene-LNP58_RS08545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1793713,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158209.1;locus_tag=LNP58_RS08545;partial=true;product=two-component sensor histidine kinase;pseudo=true;start_range=.,1793516;transl_table=11 NZ_CP086372.1 RefSeq gene 1794335 1795186 . - . ID=gene-LNP58_RS08550;Name=LNP58_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08550;old_locus_tag=LNP58_08545 NZ_CP086372.1 Protein Homology CDS 1794335 1795186 . - 0 ID=cds-WP_011407227.1;Parent=gene-LNP58_RS08550;Dbxref=Genbank:WP_011407227.1;Name=WP_011407227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052649.1;locus_tag=LNP58_RS08550;product=histidine biosynthesis protein HisIE;protein_id=WP_011407227.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1795428 1796864 . + . ID=gene-LNP58_RS08555;Name=LNP58_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08555;old_locus_tag=LNP58_08550 NZ_CP086372.1 Protein Homology CDS 1795428 1796864 . + 0 ID=cds-WP_011257055.1;Parent=gene-LNP58_RS08555;Dbxref=Genbank:WP_011257055.1;Name=WP_011257055.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257055.1;locus_tag=LNP58_RS08555;product=Do family serine endopeptidase;protein_id=WP_011257055.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1796981 1797343 . + . ID=gene-LNP58_RS08560;Name=LNP58_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08560;old_locus_tag=LNP58_08555 NZ_CP086372.1 Protein Homology CDS 1796981 1797343 . + 0 ID=cds-WP_011407225.1;Parent=gene-LNP58_RS08560;Dbxref=Genbank:WP_011407225.1;Name=WP_011407225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966985.1;locus_tag=LNP58_RS08560;product=hypothetical protein;protein_id=WP_011407225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1797347 1797832 . + . ID=gene-LNP58_RS08565;Name=LNP58_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08565;old_locus_tag=LNP58_08560 NZ_CP086372.1 Protein Homology CDS 1797347 1797832 . + 0 ID=cds-WP_011407224.1;Parent=gene-LNP58_RS08565;Dbxref=Genbank:WP_011407224.1;Name=WP_011407224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115391.1;locus_tag=LNP58_RS08565;product=hypothetical protein;protein_id=WP_011407224.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1797829 1798212 . + . ID=gene-LNP58_RS08570;Name=LNP58_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08570;old_locus_tag=LNP58_08565 NZ_CP086372.1 Protein Homology CDS 1797829 1798212 . + 0 ID=cds-WP_011407223.1;Parent=gene-LNP58_RS08570;Dbxref=Genbank:WP_011407223.1;Name=WP_011407223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117789.1;locus_tag=LNP58_RS08570;product=hypothetical protein;protein_id=WP_011407223.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1798382 1798458 . + . ID=gene-LNP58_RS08575;Name=LNP58_RS08575;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS08575;old_locus_tag=LNP58_08570 NZ_CP086372.1 cmsearch ncRNA 1798382 1798458 . + . ID=rna-LNP58_RS08575;Parent=gene-LNP58_RS08575;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08575;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1798382 1798458 . + . ID=exon-LNP58_RS08575-1;Parent=rna-LNP58_RS08575;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08575;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1798770 1800209 . - . ID=gene-LNP58_RS08580;Name=LNP58_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08580;old_locus_tag=LNP58_08575 NZ_CP086372.1 Protein Homology CDS 1798770 1800209 . - 0 ID=cds-WP_071162348.1;Parent=gene-LNP58_RS08580;Dbxref=Genbank:WP_071162348.1;Name=WP_071162348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089127.1;locus_tag=LNP58_RS08580;product=type III secretion system effector XopAE;protein_id=WP_071162348.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1800778 1800915 . - . ID=gene-LNP58_RS08585;Name=LNP58_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08585;old_locus_tag=LNP58_08580 NZ_CP086372.1 Protein Homology CDS 1800778 1800915 . - 0 ID=cds-WP_012443591.1;Parent=gene-LNP58_RS08585;Dbxref=Genbank:WP_012443591.1;Name=WP_012443591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505163.1;locus_tag=LNP58_RS08585;product=hypothetical protein;protein_id=WP_012443591.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1801275 1803683 . - . ID=gene-LNP58_RS08590;Name=LNP58_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08590;old_locus_tag=LNP58_08585 NZ_CP086372.1 Protein Homology CDS 1801275 1803683 . - 0 ID=cds-WP_113085544.1;Parent=gene-LNP58_RS08590;Dbxref=Genbank:WP_113085544.1;Name=WP_113085544.1;Ontology_term=GO:0009877;gbkey=CDS;go_process=nodulation|0009877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160376.1;locus_tag=LNP58_RS08590;product=HrpF/NolX family T3SS translocon protein;protein_id=WP_113085544.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1804268 1805586 . + . ID=gene-LNP58_RS08595;Name=LNP58_RS08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08595;old_locus_tag=LNP58_08590;pseudo=true NZ_CP086372.1 Protein Homology CDS 1804268 1805586 . + 0 ID=cds-LNP58_RS08595;Parent=gene-LNP58_RS08595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08595;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1805815 1806261 . + . ID=gene-LNP58_RS08600;Name=LNP58_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08600;old_locus_tag=LNP58_08595 NZ_CP086372.1 Protein Homology CDS 1805815 1806261 . + 0 ID=cds-WP_011407217.1;Parent=gene-LNP58_RS08600;Dbxref=Genbank:WP_011407217.1;Name=WP_011407217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367891.1;locus_tag=LNP58_RS08600;product=hypothetical protein;protein_id=WP_011407217.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1806258 1808243 . + . ID=gene-LNP58_RS08605;Name=xopF1;gbkey=Gene;gene=xopF1;gene_biotype=protein_coding;locus_tag=LNP58_RS08605;old_locus_tag=LNP58_08600 NZ_CP086372.1 Protein Homology CDS 1806258 1808243 . + 0 ID=cds-WP_011257071.1;Parent=gene-LNP58_RS08605;Dbxref=Genbank:WP_011257071.1;Name=WP_011257071.1;Ontology_term=GO:0030254;gbkey=CDS;gene=xopF1;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257071.1;locus_tag=LNP58_RS08605;product=type III secretion system effector protein XopF1;protein_id=WP_011257071.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1808349 1808425 . - . ID=gene-LNP58_RS08610;Name=LNP58_RS08610;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS08610;old_locus_tag=LNP58_08605 NZ_CP086372.1 cmsearch ncRNA 1808349 1808425 . - . ID=rna-LNP58_RS08610;Parent=gene-LNP58_RS08610;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08610;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1808349 1808425 . - . ID=exon-LNP58_RS08610-1;Parent=rna-LNP58_RS08610;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08610;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1808658 1809128 . - . ID=gene-LNP58_RS08615;Name=LNP58_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08615;old_locus_tag=LNP58_08610 NZ_CP086372.1 Protein Homology CDS 1808658 1809128 . - 0 ID=cds-WP_011257072.1;Parent=gene-LNP58_RS08615;Dbxref=Genbank:WP_011257072.1;Name=WP_011257072.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912720.1;locus_tag=LNP58_RS08615;product=CesT family type III secretion system chaperone;protein_id=WP_011257072.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1809183 1809464 . - . ID=gene-LNP58_RS08620;Name=LNP58_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08620;old_locus_tag=LNP58_08615 NZ_CP086372.1 GeneMarkS-2+ CDS 1809183 1809464 . - 0 ID=cds-WP_011257073.1;Parent=gene-LNP58_RS08620;Dbxref=Genbank:WP_011257073.1;Name=WP_011257073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08620;product=hypothetical protein;protein_id=WP_011257073.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1809545 1809787 . - . ID=gene-LNP58_RS08625;Name=LNP58_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08625;old_locus_tag=LNP58_08620 NZ_CP086372.1 Protein Homology CDS 1809545 1809787 . - 0 ID=cds-WP_011257074.1;Parent=gene-LNP58_RS08625;Dbxref=Genbank:WP_011257074.1;Name=WP_011257074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301127.1;locus_tag=LNP58_RS08625;product=hypothetical protein;protein_id=WP_011257074.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1809797 1810735 . - . ID=gene-LNP58_RS08630;Name=LNP58_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08630;old_locus_tag=LNP58_08625 NZ_CP086372.1 Protein Homology CDS 1809797 1810735 . - 0 ID=cds-WP_011257075.1;Parent=gene-LNP58_RS08630;Dbxref=Genbank:WP_011257075.1;Name=WP_011257075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965398.1;locus_tag=LNP58_RS08630;product=hypothetical protein;protein_id=WP_011257075.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1810732 1811559 . - . ID=gene-LNP58_RS08635;Name=LNP58_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08635;old_locus_tag=LNP58_08630 NZ_CP086372.1 Protein Homology CDS 1810732 1811559 . - 0 ID=cds-WP_011257076.1;Parent=gene-LNP58_RS08635;Dbxref=Genbank:WP_011257076.1;Name=WP_011257076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156504.1;locus_tag=LNP58_RS08635;product=hypothetical protein;protein_id=WP_011257076.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1811556 1811816 . - . ID=gene-LNP58_RS08640;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LNP58_RS08640;old_locus_tag=LNP58_08635 NZ_CP086372.1 Protein Homology CDS 1811556 1811816 . - 0 ID=cds-WP_011257077.1;Parent=gene-LNP58_RS08640;Dbxref=Genbank:WP_011257077.1;Name=WP_011257077.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901415.1;locus_tag=LNP58_RS08640;product=type III secretion system export apparatus subunit SctS;protein_id=WP_011257077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1811821 1812465 . - . ID=gene-LNP58_RS08645;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=LNP58_RS08645;old_locus_tag=LNP58_08640 NZ_CP086372.1 Protein Homology CDS 1811821 1812465 . - 0 ID=cds-WP_011407215.1;Parent=gene-LNP58_RS08645;Dbxref=Genbank:WP_011407215.1;Name=WP_011407215.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158888.1;locus_tag=LNP58_RS08645;product=type III secretion system export apparatus subunit SctR;protein_id=WP_011407215.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1812452 1813405 . - . ID=gene-LNP58_RS08650;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=LNP58_RS08650;old_locus_tag=LNP58_08645 NZ_CP086372.1 Protein Homology CDS 1812452 1813405 . - 0 ID=cds-WP_027704248.1;Parent=gene-LNP58_RS08650;Dbxref=Genbank:WP_027704248.1;Name=WP_027704248.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156505.1;locus_tag=LNP58_RS08650;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_027704248.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1813498 1814139 . - . ID=gene-LNP58_RS08655;Name=sctP;gbkey=Gene;gene=sctP;gene_biotype=protein_coding;locus_tag=LNP58_RS08655;old_locus_tag=LNP58_08650 NZ_CP086372.1 Protein Homology CDS 1813498 1814139 . - 0 ID=cds-WP_113085555.1;Parent=gene-LNP58_RS08655;Dbxref=Genbank:WP_113085555.1;Name=WP_113085555.1;gbkey=CDS;gene=sctP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575445.1;locus_tag=LNP58_RS08655;product=type III secretion system protein SctP;protein_id=WP_113085555.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1814139 1816076 . - . ID=gene-LNP58_RS08660;Name=LNP58_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08660;old_locus_tag=LNP58_08655 NZ_CP086372.1 Protein Homology CDS 1814139 1816076 . - 0 ID=cds-WP_011257081.1;Parent=gene-LNP58_RS08660;Dbxref=Genbank:WP_011257081.1;Name=WP_011257081.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046934829.1;locus_tag=LNP58_RS08660;product=FHIPEP family type III secretion protein;protein_id=WP_011257081.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1816070 1817149 . - . ID=gene-LNP58_RS08665;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=LNP58_RS08665;old_locus_tag=LNP58_08660 NZ_CP086372.1 Protein Homology CDS 1816070 1817149 . - 0 ID=cds-WP_012443605.1;Parent=gene-LNP58_RS08665;Dbxref=Genbank:WP_012443605.1;Name=WP_012443605.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912703.1;locus_tag=LNP58_RS08665;product=type III secretion system export apparatus subunit SctU;protein_id=WP_012443605.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1817364 1817819 . + . ID=gene-LNP58_RS08670;Name=LNP58_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08670;old_locus_tag=LNP58_08665 NZ_CP086372.1 Protein Homology CDS 1817364 1817819 . + 0 ID=cds-WP_011257083.1;Parent=gene-LNP58_RS08670;Dbxref=Genbank:WP_011257083.1;Name=WP_011257083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156509.1;locus_tag=LNP58_RS08670;product=HrpB1 family type III secretion system apparatus protein;protein_id=WP_011257083.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1817853 1818245 . + . ID=gene-LNP58_RS08675;Name=LNP58_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08675;old_locus_tag=LNP58_08670 NZ_CP086372.1 Protein Homology CDS 1817853 1818245 . + 0 ID=cds-WP_011407211.1;Parent=gene-LNP58_RS08675;Dbxref=Genbank:WP_011407211.1;Name=WP_011407211.1;Ontology_term=GO:0030254,GO:0003824,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_function=catalytic activity|0003824||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505147.1;locus_tag=LNP58_RS08675;product=type III secretion protein HrpB2;protein_id=WP_011407211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1818247 1819008 . + . ID=gene-LNP58_RS08680;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LNP58_RS08680;old_locus_tag=LNP58_08675 NZ_CP086372.1 Protein Homology CDS 1818247 1819008 . + 0 ID=cds-WP_011257085.1;Parent=gene-LNP58_RS08680;Dbxref=Genbank:WP_011257085.1;Name=WP_011257085.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965380.1;locus_tag=LNP58_RS08680;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_011257085.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1819016 1819645 . + . ID=gene-LNP58_RS08685;Name=LNP58_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08685;old_locus_tag=LNP58_08680 NZ_CP086372.1 Protein Homology CDS 1819016 1819645 . + 0 ID=cds-WP_044756180.1;Parent=gene-LNP58_RS08685;Dbxref=Genbank:WP_044756180.1;Name=WP_044756180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171652.1;locus_tag=LNP58_RS08685;product=type III secretion protein HrpB4;protein_id=WP_044756180.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1819630 1820331 . + . ID=gene-LNP58_RS08690;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LNP58_RS08690;old_locus_tag=LNP58_08685 NZ_CP086372.1 Protein Homology CDS 1819630 1820331 . + 0 ID=cds-WP_011257087.1;Parent=gene-LNP58_RS08690;Dbxref=Genbank:WP_011257087.1;Name=WP_011257087.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089143.1;locus_tag=LNP58_RS08690;product=type III secretion system stator protein SctL;protein_id=WP_011257087.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1820321 1821649 . + . ID=gene-LNP58_RS08695;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=LNP58_RS08695;old_locus_tag=LNP58_08690 NZ_CP086372.1 Protein Homology CDS 1820321 1821649 . + 0 ID=cds-WP_069964475.1;Parent=gene-LNP58_RS08695;Dbxref=Genbank:WP_069964475.1;Name=WP_069964475.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972469.1;locus_tag=LNP58_RS08695;product=type III secretion system ATPase SctN;protein_id=WP_069964475.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1821642 1822151 . + . ID=gene-LNP58_RS08700;Name=LNP58_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08700;old_locus_tag=LNP58_08695 NZ_CP086372.1 Protein Homology CDS 1821642 1822151 . + 0 ID=cds-WP_011257089.1;Parent=gene-LNP58_RS08700;Dbxref=Genbank:WP_011257089.1;Name=WP_011257089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050300.1;locus_tag=LNP58_RS08700;product=type III secretion protein HrpB7;protein_id=WP_011257089.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1822148 1822978 . + . ID=gene-LNP58_RS08705;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LNP58_RS08705;old_locus_tag=LNP58_08700 NZ_CP086372.1 Protein Homology CDS 1822148 1822978 . + 0 ID=cds-WP_011257090.1;Parent=gene-LNP58_RS08705;Dbxref=Genbank:WP_011257090.1;Name=WP_011257090.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089146.1;locus_tag=LNP58_RS08705;product=type III secretion system export apparatus subunit SctT;protein_id=WP_011257090.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1823061 1824878 . + . ID=gene-LNP58_RS08710;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LNP58_RS08710;old_locus_tag=LNP58_08705 NZ_CP086372.1 Protein Homology CDS 1823061 1824878 . + 0 ID=cds-WP_011257091.1;Parent=gene-LNP58_RS08710;Dbxref=Genbank:WP_011257091.1;Name=WP_011257091.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972464.1;locus_tag=LNP58_RS08710;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_011257091.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1825617 1826036 . - . ID=gene-LNP58_RS08715;Name=LNP58_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08715;old_locus_tag=LNP58_08710 NZ_CP086372.1 Protein Homology CDS 1825617 1826036 . - 0 ID=cds-WP_011257092.1;Parent=gene-LNP58_RS08715;Dbxref=Genbank:WP_011257092.1;Name=WP_011257092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257092.1;locus_tag=LNP58_RS08715;product=hypothetical protein;protein_id=WP_011257092.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1826412 1826975 . + . ID=gene-LNP58_RS08720;Name=LNP58_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08720;old_locus_tag=LNP58_08715 NZ_CP086372.1 Protein Homology CDS 1826412 1826975 . + 0 ID=cds-WP_011257093.1;Parent=gene-LNP58_RS08720;Dbxref=Genbank:WP_011257093.1;Name=WP_011257093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156519.1;locus_tag=LNP58_RS08720;product=lytic transglycosylase domain-containing protein;protein_id=WP_011257093.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1827439 1828992 . - . ID=gene-LNP58_RS08725;Name=LNP58_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08725;old_locus_tag=LNP58_08720 NZ_CP086372.1 Protein Homology CDS 1827439 1828992 . - 0 ID=cds-WP_011257094.1;Parent=gene-LNP58_RS08725;Dbxref=Genbank:WP_011257094.1;Name=WP_011257094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304790.1;locus_tag=LNP58_RS08725;product=hypothetical protein;protein_id=WP_011257094.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1830007 1831065 . - . ID=gene-LNP58_RS08730;Name=LNP58_RS08730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08730;old_locus_tag=LNP58_08725;pseudo=true NZ_CP086372.1 Protein Homology CDS 1830007 1831065 . - 0 ID=cds-LNP58_RS08730;Parent=gene-LNP58_RS08730;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS08730;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1831209 1831550 . - . ID=gene-LNP58_RS08735;Name=LNP58_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08735;old_locus_tag=LNP58_08730 NZ_CP086372.1 Protein Homology CDS 1831209 1831550 . - 0 ID=cds-WP_011257097.1;Parent=gene-LNP58_RS08735;Dbxref=Genbank:WP_011257097.1;Name=WP_011257097.1;Ontology_term=GO:0044238;gbkey=CDS;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974834.1;locus_tag=LNP58_RS08735;product=HPF/RaiA family ribosome-associated protein;protein_id=WP_011257097.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1831903 1834293 . + . ID=gene-LNP58_RS08740;Name=LNP58_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08740;old_locus_tag=LNP58_08735 NZ_CP086372.1 Protein Homology CDS 1831903 1834293 . + 0 ID=cds-WP_228329731.1;Parent=gene-LNP58_RS08740;Dbxref=Genbank:WP_228329731.1;Name=WP_228329731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928375.1;locus_tag=LNP58_RS08740;product=DUF3772 domain-containing protein;protein_id=WP_228329731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1834312 1834572 . - . ID=gene-LNP58_RS08745;Name=LNP58_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08745;old_locus_tag=LNP58_08740 NZ_CP086372.1 Protein Homology CDS 1834312 1834572 . - 0 ID=cds-WP_011407204.1;Parent=gene-LNP58_RS08745;Dbxref=Genbank:WP_011407204.1;Name=WP_011407204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407204.1;locus_tag=LNP58_RS08745;product=hypothetical protein;protein_id=WP_011407204.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1834632 1834817 . + . ID=gene-LNP58_RS08750;Name=LNP58_RS08750;end_range=1834817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08750;old_locus_tag=LNP58_08745;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1834632 1834817 . + 0 ID=cds-LNP58_RS08750;Parent=gene-LNP58_RS08750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1834817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS08750;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1834823 1835789 . - . ID=gene-LNP58_RS08755;Name=LNP58_RS08755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08755;old_locus_tag=LNP58_08750;pseudo=true NZ_CP086372.1 Protein Homology CDS 1834823 1835789 . - 0 ID=cds-LNP58_RS08755;Parent=gene-LNP58_RS08755;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08755;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1835873 1836462 . + . ID=gene-LNP58_RS08760;Name=LNP58_RS08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08760;old_locus_tag=LNP58_08755;partial=true;pseudo=true;start_range=.,1835873 NZ_CP086372.1 Protein Homology CDS 1835873 1836462 . + 0 ID=cds-LNP58_RS08760;Parent=gene-LNP58_RS08760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS08760;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1835873;transl_table=11 NZ_CP086372.1 RefSeq gene 1836469 1838376 . - . ID=gene-LNP58_RS08765;Name=LNP58_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08765;old_locus_tag=LNP58_08760 NZ_CP086372.1 Protein Homology CDS 1836469 1838376 . - 0 ID=cds-WP_027703735.1;Parent=gene-LNP58_RS08765;Dbxref=Genbank:WP_027703735.1;Name=WP_027703735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158895.1;locus_tag=LNP58_RS08765;product=ABC transporter substrate-binding protein;protein_id=WP_027703735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1838434 1839375 . + . ID=gene-LNP58_RS08770;Name=LNP58_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08770;old_locus_tag=LNP58_08765 NZ_CP086372.1 Protein Homology CDS 1838434 1839375 . + 0 ID=cds-WP_011257102.1;Parent=gene-LNP58_RS08770;Dbxref=Genbank:WP_011257102.1;Name=WP_011257102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367950.1;locus_tag=LNP58_RS08770;product=DUF808 domain-containing protein;protein_id=WP_011257102.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1839568 1840932 . + . ID=gene-LNP58_RS08775;Name=LNP58_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08775;old_locus_tag=LNP58_08770 NZ_CP086372.1 Protein Homology CDS 1839568 1840932 . + 0 ID=cds-WP_011257103.1;Parent=gene-LNP58_RS08775;Dbxref=Genbank:WP_011257103.1;Name=WP_011257103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301290.1;locus_tag=LNP58_RS08775;product=glycoside hydrolase family 10 protein;protein_id=WP_011257103.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1840929 1842557 . - . ID=gene-LNP58_RS08780;Name=LNP58_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08780;old_locus_tag=LNP58_08775 NZ_CP086372.1 Protein Homology CDS 1840929 1842557 . - 0 ID=cds-WP_011257104.1;Parent=gene-LNP58_RS08780;Dbxref=Genbank:WP_011257104.1;Name=WP_011257104.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089156.1;locus_tag=LNP58_RS08780;product=GGDEF domain-containing protein;protein_id=WP_011257104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1843031 1844614 . + . ID=gene-LNP58_RS08785;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=LNP58_RS08785;old_locus_tag=LNP58_08780 NZ_CP086372.1 Protein Homology CDS 1843031 1844614 . + 0 ID=cds-WP_027703733.1;Parent=gene-LNP58_RS08785;Dbxref=Genbank:WP_027703733.1;Name=WP_027703733.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575489.1;locus_tag=LNP58_RS08785;product=glycogen synthase GlgA;protein_id=WP_027703733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1844611 1846845 . + . ID=gene-LNP58_RS08790;Name=LNP58_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08790;old_locus_tag=LNP58_08785 NZ_CP086372.1 Protein Homology CDS 1844611 1846845 . + 0 ID=cds-WP_011407200.1;Parent=gene-LNP58_RS08790;Dbxref=Genbank:WP_011407200.1;Name=WP_011407200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161584.1;locus_tag=LNP58_RS08790;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_011407200.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1846848 1848605 . + . ID=gene-LNP58_RS08795;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=LNP58_RS08795;old_locus_tag=LNP58_08790 NZ_CP086372.1 Protein Homology CDS 1846848 1848605 . + 0 ID=cds-WP_011257107.1;Parent=gene-LNP58_RS08795;Dbxref=Genbank:WP_011257107.1;Name=WP_011257107.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156528.1;locus_tag=LNP58_RS08795;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_011257107.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1848662 1850551 . + . ID=gene-LNP58_RS08800;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LNP58_RS08800;old_locus_tag=LNP58_08795 NZ_CP086372.1 Protein Homology CDS 1848662 1850551 . + 0 ID=cds-WP_094187819.1;Parent=gene-LNP58_RS08800;Dbxref=Genbank:WP_094187819.1;Name=WP_094187819.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997588.1;locus_tag=LNP58_RS08800;product=4-alpha-glucanotransferase;protein_id=WP_094187819.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1850548 1853151 . + . ID=gene-LNP58_RS08805;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=LNP58_RS08805;old_locus_tag=LNP58_08800 NZ_CP086372.1 Protein Homology CDS 1850548 1853151 . + 0 ID=cds-WP_011257109.1;Parent=gene-LNP58_RS08805;Dbxref=Genbank:WP_011257109.1;Name=WP_011257109.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505122.1;locus_tag=LNP58_RS08805;product=malto-oligosyltrehalose synthase;protein_id=WP_011257109.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1853174 1853359 . + . ID=gene-LNP58_RS08810;Name=LNP58_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08810;old_locus_tag=LNP58_08805 NZ_CP086372.1 Protein Homology CDS 1853174 1853359 . + 0 ID=cds-WP_011407199.1;Parent=gene-LNP58_RS08810;Dbxref=Genbank:WP_011407199.1;Name=WP_011407199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158479.1;locus_tag=LNP58_RS08810;product=DUF2934 domain-containing protein;protein_id=WP_011407199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1853474 1855636 . + . ID=gene-LNP58_RS08815;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LNP58_RS08815;old_locus_tag=LNP58_08810 NZ_CP086372.1 Protein Homology CDS 1853474 1855636 . + 0 ID=cds-WP_011257110.1;Parent=gene-LNP58_RS08815;Dbxref=Genbank:WP_011257110.1;Name=WP_011257110.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382022.1;locus_tag=LNP58_RS08815;product=glycogen debranching protein GlgX;protein_id=WP_011257110.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1855653 1856285 . + . ID=gene-LNP58_RS08820;Name=LNP58_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08820;old_locus_tag=LNP58_08815 NZ_CP086372.1 Protein Homology CDS 1855653 1856285 . + 0 ID=cds-WP_027703730.1;Parent=gene-LNP58_RS08820;Dbxref=Genbank:WP_027703730.1;Name=WP_027703730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301281.1;locus_tag=LNP58_RS08820;product=NAD(P)H-binding protein;protein_id=WP_027703730.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1856449 1856946 . + . ID=gene-LNP58_RS08825;Name=LNP58_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08825;old_locus_tag=LNP58_08820 NZ_CP086372.1 GeneMarkS-2+ CDS 1856449 1856946 . + 0 ID=cds-WP_011407198.1;Parent=gene-LNP58_RS08825;Dbxref=Genbank:WP_011407198.1;Name=WP_011407198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08825;product=hypothetical protein;protein_id=WP_011407198.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1856998 1857074 . + . ID=gene-LNP58_RS08830;Name=LNP58_RS08830;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS08830;old_locus_tag=LNP58_08825 NZ_CP086372.1 cmsearch ncRNA 1856998 1857074 . + . ID=rna-LNP58_RS08830;Parent=gene-LNP58_RS08830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08830;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1856998 1857074 . + . ID=exon-LNP58_RS08830-1;Parent=rna-LNP58_RS08830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS08830;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1857087 1858133 . - . ID=gene-LNP58_RS08835;Name=LNP58_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08835;old_locus_tag=LNP58_08830 NZ_CP086372.1 Protein Homology CDS 1857087 1858133 . - 0 ID=cds-WP_011407197.1;Parent=gene-LNP58_RS08835;Dbxref=Genbank:WP_011407197.1;Name=WP_011407197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449750.1;locus_tag=LNP58_RS08835;product=methylamine utilization protein;protein_id=WP_011407197.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1858251 1859569 . - . ID=gene-LNP58_RS08840;Name=LNP58_RS08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08840;old_locus_tag=LNP58_08835;pseudo=true NZ_CP086372.1 Protein Homology CDS 1858251 1859569 . - 0 ID=cds-LNP58_RS08840;Parent=gene-LNP58_RS08840;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08840;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1859713 1859991 . + . ID=gene-LNP58_RS08845;Name=LNP58_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08845;old_locus_tag=LNP58_08840 NZ_CP086372.1 GeneMarkS-2+ CDS 1859713 1859991 . + 0 ID=cds-WP_125168734.1;Parent=gene-LNP58_RS08845;Dbxref=Genbank:WP_125168734.1;Name=WP_125168734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08845;product=RHS repeat protein;protein_id=WP_125168734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1859988 1860953 . - . ID=gene-LNP58_RS08850;Name=LNP58_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08850;old_locus_tag=LNP58_08845 NZ_CP086372.1 Protein Homology CDS 1859988 1860953 . - 0 ID=cds-WP_109182053.1;Parent=gene-LNP58_RS08850;Dbxref=Genbank:WP_109182053.1;Name=WP_109182053.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08850;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182053.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1861051 1861863 . + . ID=gene-LNP58_RS08855;Name=LNP58_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08855;old_locus_tag=LNP58_08850 NZ_CP086372.1 Protein Homology CDS 1861051 1861863 . + 0 ID=cds-WP_011407194.1;Parent=gene-LNP58_RS08855;Dbxref=Genbank:WP_011407194.1;Name=WP_011407194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017411.2;locus_tag=LNP58_RS08855;product=RHS repeat protein;protein_id=WP_011407194.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1861914 1862660 . + . ID=gene-LNP58_RS08860;Name=LNP58_RS08860;end_range=1862660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08860;old_locus_tag=LNP58_08855;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1861914 1862660 . + 0 ID=cds-LNP58_RS08860;Parent=gene-LNP58_RS08860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1862660,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08860;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1862668 1863466 . - . ID=gene-LNP58_RS08865;Name=LNP58_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08865;old_locus_tag=LNP58_08860 NZ_CP086372.1 Protein Homology CDS 1863195 1863466 . - 0 ID=cds-WP_228329675.1-2;Parent=gene-LNP58_RS08865;Dbxref=Genbank:WP_228329675.1;Name=WP_228329675.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS08865;product=IS5 family transposase;protein_id=WP_228329675.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 1862668 1863196 . - 1 ID=cds-WP_228329675.1-2;Parent=gene-LNP58_RS08865;Dbxref=Genbank:WP_228329675.1;Name=WP_228329675.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS08865;product=IS5 family transposase;protein_id=WP_228329675.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1863510 1863869 . + . ID=gene-LNP58_RS08870;Name=LNP58_RS08870;end_range=1863869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08870;old_locus_tag=LNP58_08865;partial=true;pseudo=true;start_range=.,1863510 NZ_CP086372.1 Protein Homology CDS 1863510 1863869 . + 0 ID=cds-LNP58_RS08870;Parent=gene-LNP58_RS08870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1863869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08870;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1863510;transl_table=11 NZ_CP086372.1 RefSeq gene 1863987 1865201 . + . ID=gene-LNP58_RS08875;Name=LNP58_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08875;old_locus_tag=LNP58_08870 NZ_CP086372.1 Protein Homology CDS 1863987 1865201 . + 0 ID=cds-WP_011407913.1-2;Parent=gene-LNP58_RS08875;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS08875;product=IS4-like element ISXo14 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1865345 1866313 . - . ID=gene-LNP58_RS08880;Name=LNP58_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08880;old_locus_tag=LNP58_08875 NZ_CP086372.1 Protein Homology CDS 1865345 1866313 . - 0 ID=cds-WP_011258803.1-4;Parent=gene-LNP58_RS08880;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS08880;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1866381 1866605 . + . ID=gene-LNP58_RS08885;Name=LNP58_RS08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08885;old_locus_tag=LNP58_08880;partial=true;pseudo=true;start_range=.,1866381 NZ_CP086372.1 Protein Homology CDS 1866381 1866605 . + 0 ID=cds-LNP58_RS08885;Parent=gene-LNP58_RS08885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS08885;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1866381;transl_table=11 NZ_CP086372.1 RefSeq gene 1866721 1867179 . + . ID=gene-LNP58_RS08890;Name=LNP58_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08890;old_locus_tag=LNP58_08885 NZ_CP086372.1 Protein Homology CDS 1866721 1867179 . + 0 ID=cds-WP_080256644.1;Parent=gene-LNP58_RS08890;Dbxref=Genbank:WP_080256644.1;Name=WP_080256644.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=LNP58_RS08890;product=polymorphic toxin type 37 domain-containing protein;protein_id=WP_080256644.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1867179 1867511 . + . ID=gene-LNP58_RS08895;Name=LNP58_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08895;old_locus_tag=LNP58_08890 NZ_CP086372.1 GeneMarkS-2+ CDS 1867179 1867511 . + 0 ID=cds-WP_027704081.1;Parent=gene-LNP58_RS08895;Dbxref=Genbank:WP_027704081.1;Name=WP_027704081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08895;product=hypothetical protein;protein_id=WP_027704081.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1867528 1867788 . + . ID=gene-LNP58_RS08900;Name=LNP58_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08900;old_locus_tag=LNP58_08895 NZ_CP086372.1 Protein Homology CDS 1867528 1867788 . + 0 ID=cds-WP_011257122.1;Parent=gene-LNP58_RS08900;Dbxref=Genbank:WP_011257122.1;Name=WP_011257122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257122.1;locus_tag=LNP58_RS08900;product=hypothetical protein;protein_id=WP_011257122.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1868613 1868828 . - . ID=gene-LNP58_RS08905;Name=LNP58_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08905;old_locus_tag=LNP58_08900 NZ_CP086372.1 GeneMarkS-2+ CDS 1868613 1868828 . - 0 ID=cds-WP_041181902.1;Parent=gene-LNP58_RS08905;Dbxref=Genbank:WP_041181902.1;Name=WP_041181902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08905;product=hypothetical protein;protein_id=WP_041181902.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1869106 1870515 . + . ID=gene-LNP58_RS08910;Name=LNP58_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08910;old_locus_tag=LNP58_08905 NZ_CP086372.1 Protein Homology CDS 1869106 1870515 . + 0 ID=cds-WP_024743401.1;Parent=gene-LNP58_RS08910;Dbxref=Genbank:WP_024743401.1;Name=WP_024743401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901659.1;locus_tag=LNP58_RS08910;product=FAD/NAD(P)-binding protein;protein_id=WP_024743401.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1870550 1870702 . + . ID=gene-LNP58_RS08915;Name=LNP58_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08915;old_locus_tag=LNP58_08910 NZ_CP086372.1 GeneMarkS-2+ CDS 1870550 1870702 . + 0 ID=cds-WP_155296471.1;Parent=gene-LNP58_RS08915;Dbxref=Genbank:WP_155296471.1;Name=WP_155296471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08915;product=hypothetical protein;protein_id=WP_155296471.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1870864 1871295 . + . ID=gene-LNP58_RS08920;Name=LNP58_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08920;old_locus_tag=LNP58_08915 NZ_CP086372.1 Protein Homology CDS 1870864 1871295 . + 0 ID=cds-WP_011407187.1;Parent=gene-LNP58_RS08920;Dbxref=Genbank:WP_011407187.1;Name=WP_011407187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156537.1;locus_tag=LNP58_RS08920;product=VirK family protein;protein_id=WP_011407187.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1871570 1871905 . + . ID=gene-LNP58_RS08925;Name=LNP58_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08925;old_locus_tag=LNP58_08920 NZ_CP086372.1 Protein Homology CDS 1871570 1871905 . + 0 ID=cds-WP_012443638.1;Parent=gene-LNP58_RS08925;Dbxref=Genbank:WP_012443638.1;Name=WP_012443638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301442.1;locus_tag=LNP58_RS08925;product=DUF6172 family protein;protein_id=WP_012443638.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1872345 1873634 . - . ID=gene-LNP58_RS08930;Name=LNP58_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08930;old_locus_tag=LNP58_08925 NZ_CP086372.1 Protein Homology CDS 1872345 1873634 . - 0 ID=cds-WP_011407184.1;Parent=gene-LNP58_RS08930;Dbxref=Genbank:WP_011407184.1;Name=WP_011407184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035678.1;locus_tag=LNP58_RS08930;product=DEAD/DEAH box helicase;protein_id=WP_011407184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1874253 1875233 . + . ID=gene-LNP58_RS08935;Name=LNP58_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08935;old_locus_tag=LNP58_08930 NZ_CP086372.1 Protein Homology CDS 1874253 1875233 . + 0 ID=cds-WP_012443641.1;Parent=gene-LNP58_RS08935;Dbxref=Genbank:WP_012443641.1;Name=WP_012443641.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=LNP58_RS08935;product=IS5-like element ISXoo7 family transposase;protein_id=WP_012443641.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1875411 1876022 . + . ID=gene-LNP58_RS08940;Name=LNP58_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08940;old_locus_tag=LNP58_08935 NZ_CP086372.1 Protein Homology CDS 1875411 1876022 . + 0 ID=cds-WP_228329674.1;Parent=gene-LNP58_RS08940;Dbxref=Genbank:WP_228329674.1;Name=WP_228329674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501669.1;locus_tag=LNP58_RS08940;product=type III effector protein XopW;protein_id=WP_228329674.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1876260 1876586 . - . ID=gene-LNP58_RS08945;Name=LNP58_RS08945;end_range=1876586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08945;old_locus_tag=LNP58_08940;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1876260 1876586 . - 0 ID=cds-LNP58_RS08945;Parent=gene-LNP58_RS08945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016746;end_range=1876586,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050323.1;locus_tag=LNP58_RS08945;partial=true;product=2-oxo acid dehydrogenase subunit E2;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1876582 1877547 . - . ID=gene-LNP58_RS08950;Name=LNP58_RS08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08950;old_locus_tag=LNP58_08945;pseudo=true NZ_CP086372.1 Protein Homology CDS 1876582 1877547 . - 0 ID=cds-LNP58_RS08950;Parent=gene-LNP58_RS08950;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS08950;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1877635 1877898 . - . ID=gene-LNP58_RS08955;Name=LNP58_RS08955;end_range=1877898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08955;old_locus_tag=LNP58_08950;partial=true;pseudo=true;start_range=.,1877635 NZ_CP086372.1 Protein Homology CDS 1877635 1877898 . - 0 ID=cds-LNP58_RS08955;Parent=gene-LNP58_RS08955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016746;end_range=1877898,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156544.1;locus_tag=LNP58_RS08955;partial=true;product=2-oxo acid dehydrogenase subunit E2;pseudo=true;start_range=.,1877635;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1878015 1879103 . + . ID=gene-LNP58_RS08960;Name=LNP58_RS08960;end_range=1879103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08960;old_locus_tag=LNP58_08955;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1878015 1879103 . + 0 ID=cds-LNP58_RS08960;Parent=gene-LNP58_RS08960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1879103,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS08960;partial=true;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1879219 1880595 . + . ID=gene-LNP58_RS08965;Name=LNP58_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08965;old_locus_tag=LNP58_08960 NZ_CP086372.1 Protein Homology CDS 1879219 1880595 . + 0 ID=cds-WP_012443646.1;Parent=gene-LNP58_RS08965;Dbxref=Genbank:WP_012443646.1;Name=WP_012443646.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS08965;product=IS5 family transposase;protein_id=WP_012443646.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1880617 1881009 . + . ID=gene-LNP58_RS08970;Name=LNP58_RS08970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08970;old_locus_tag=LNP58_08965;partial=true;pseudo=true;start_range=.,1880617 NZ_CP086372.1 Protein Homology CDS 1880617 1881009 . + 0 ID=cds-LNP58_RS08970;Parent=gene-LNP58_RS08970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS08970;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1880617;transl_table=11 NZ_CP086372.1 RefSeq gene 1881197 1881904 . - . ID=gene-LNP58_RS08975;Name=LNP58_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08975;old_locus_tag=LNP58_08970 NZ_CP086372.1 Protein Homology CDS 1881197 1881904 . - 0 ID=cds-WP_129215536.1;Parent=gene-LNP58_RS08975;Dbxref=Genbank:WP_129215536.1;Name=WP_129215536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LNP58_RS08975;product=ABC transporter ATP-binding protein;protein_id=WP_129215536.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1881901 1883037 . - . ID=gene-LNP58_RS08980;Name=LNP58_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08980;old_locus_tag=LNP58_08975 NZ_CP086372.1 GeneMarkS-2+ CDS 1881901 1883037 . - 0 ID=cds-WP_011407176.1;Parent=gene-LNP58_RS08980;Dbxref=Genbank:WP_011407176.1;Name=WP_011407176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS08980;product=hypothetical protein;protein_id=WP_011407176.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1883525 1884493 . - . ID=gene-LNP58_RS08985;Name=LNP58_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08985;old_locus_tag=LNP58_08980 NZ_CP086372.1 Protein Homology CDS 1883525 1884493 . - 0 ID=cds-WP_011407175.1;Parent=gene-LNP58_RS08985;Dbxref=Genbank:WP_011407175.1;Name=WP_011407175.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS08985;product=IS5-like element ISXo1 family transposase;protein_id=WP_011407175.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1884676 1885029 . - . ID=gene-LNP58_RS08990;Name=LNP58_RS08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS08990;old_locus_tag=LNP58_08985;partial=true;pseudo=true;start_range=.,1884676 NZ_CP086372.1 Protein Homology CDS 1884676 1885029 . - 0 ID=cds-LNP58_RS08990;Parent=gene-LNP58_RS08990;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970752.1;locus_tag=LNP58_RS08990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1884676;transl_table=11 NZ_CP086372.1 RefSeq gene 1885316 1886338 . + . ID=gene-LNP58_RS08995;Name=LNP58_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS08995;old_locus_tag=LNP58_08990 NZ_CP086372.1 Protein Homology CDS 1885316 1886338 . + 0 ID=cds-WP_011257029.1;Parent=gene-LNP58_RS08995;Dbxref=Genbank:WP_011257029.1;Name=WP_011257029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970754.1;locus_tag=LNP58_RS08995;product=sugar kinase;protein_id=WP_011257029.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1886552 1886745 . - . ID=gene-LNP58_RS09000;Name=LNP58_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09000;old_locus_tag=LNP58_08995;pseudo=true NZ_CP086372.1 Protein Homology CDS 1886552 1886745 . - 0 ID=cds-LNP58_RS09000;Parent=gene-LNP58_RS09000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915938.1;locus_tag=LNP58_RS09000;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1886966 1888174 . - . ID=gene-LNP58_RS09005;Name=LNP58_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09005;old_locus_tag=LNP58_09000 NZ_CP086372.1 Protein Homology CDS 1886966 1888174 . - 0 ID=cds-WP_069959660.1;Parent=gene-LNP58_RS09005;Dbxref=Genbank:WP_069959660.1;Name=WP_069959660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301943.1;locus_tag=LNP58_RS09005;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_069959660.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1888456 1889319 . + . ID=gene-LNP58_RS09010;Name=LNP58_RS09010;end_range=1889319,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09010;old_locus_tag=LNP58_09005;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1888456 1889319 . + 0 ID=cds-LNP58_RS09010;Parent=gene-LNP58_RS09010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=1889319,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154859.1;locus_tag=LNP58_RS09010;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1889322 1889588 . - . ID=gene-LNP58_RS09015;Name=LNP58_RS09015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09015;old_locus_tag=LNP58_09010;partial=true;pseudo=true;start_range=.,1889322 NZ_CP086372.1 Protein Homology CDS 1889322 1889588 . - 0 ID=cds-LNP58_RS09015;Parent=gene-LNP58_RS09015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088940.1;locus_tag=LNP58_RS09015;partial=true;product=sensor histidine kinase;pseudo=true;start_range=.,1889322;transl_table=11 NZ_CP086372.1 RefSeq gene 1889649 1890215 . + . ID=gene-LNP58_RS09020;Name=LNP58_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09020;old_locus_tag=LNP58_09015 NZ_CP086372.1 Protein Homology CDS 1889649 1890215 . + 0 ID=cds-WP_069959658.1;Parent=gene-LNP58_RS09020;Dbxref=Genbank:WP_069959658.1;Name=WP_069959658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165246.1;locus_tag=LNP58_RS09020;product=phosphatidylethanolamine N-methyltransferase family protein;protein_id=WP_069959658.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1890362 1891528 . + . ID=gene-LNP58_RS09025;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=LNP58_RS09025;old_locus_tag=LNP58_09020 NZ_CP086372.1 Protein Homology CDS 1890362 1891528 . + 0 ID=cds-WP_011257025.1;Parent=gene-LNP58_RS09025;Dbxref=Genbank:WP_011257025.1;Name=WP_011257025.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573929.1;locus_tag=LNP58_RS09025;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_011257025.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1891576 1892556 . + . ID=gene-LNP58_RS09030;Name=LNP58_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09030;old_locus_tag=LNP58_09025 NZ_CP086372.1 Protein Homology CDS 1891576 1892556 . + 0 ID=cds-WP_011257024.1;Parent=gene-LNP58_RS09030;Dbxref=Genbank:WP_011257024.1;Name=WP_011257024.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=LNP58_RS09030;product=IS5 family transposase;protein_id=WP_011257024.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1892803 1893300 . + . ID=gene-LNP58_RS09035;Name=LNP58_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09035;old_locus_tag=LNP58_09030 NZ_CP086372.1 GeneMarkS-2+ CDS 1892803 1893300 . + 0 ID=cds-WP_153296734.1;Parent=gene-LNP58_RS09035;Dbxref=Genbank:WP_153296734.1;Name=WP_153296734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09035;product=hypothetical protein;protein_id=WP_153296734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1893332 1893625 . - . ID=gene-LNP58_RS09040;Name=LNP58_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09040;old_locus_tag=LNP58_09035 NZ_CP086372.1 Protein Homology CDS 1893332 1893625 . - 0 ID=cds-WP_012443560.1;Parent=gene-LNP58_RS09040;Dbxref=Genbank:WP_012443560.1;Name=WP_012443560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379761.1;locus_tag=LNP58_RS09040;product=hypothetical protein;protein_id=WP_012443560.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1893836 1895974 . - . ID=gene-LNP58_RS09045;Name=LNP58_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09045;old_locus_tag=LNP58_09040 NZ_CP086372.1 Protein Homology CDS 1893836 1895974 . - 0 ID=cds-WP_011407169.1;Parent=gene-LNP58_RS09045;Dbxref=Genbank:WP_011407169.1;Name=WP_011407169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915984.1;locus_tag=LNP58_RS09045;product=TonB-dependent receptor;protein_id=WP_011407169.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1896116 1897318 . + . ID=gene-LNP58_RS09050;Name=LNP58_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09050;old_locus_tag=LNP58_09045 NZ_CP086372.1 Protein Homology CDS 1896116 1897318 . + 0 ID=cds-WP_011257021.1;Parent=gene-LNP58_RS09050;Dbxref=Genbank:WP_011257021.1;Name=WP_011257021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849085.1;locus_tag=LNP58_RS09050;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_011257021.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1897590 1898600 . + . ID=gene-LNP58_RS09055;Name=LNP58_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09055;old_locus_tag=LNP58_09050 NZ_CP086372.1 Protein Homology CDS 1897590 1898600 . + 0 ID=cds-WP_011257020.1;Parent=gene-LNP58_RS09055;Dbxref=Genbank:WP_011257020.1;Name=WP_011257020.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379759.1;locus_tag=LNP58_RS09055;product=class 1 fructose-bisphosphatase;protein_id=WP_011257020.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1898640 1898865 . - . ID=gene-LNP58_RS09060;Name=LNP58_RS09060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09060;old_locus_tag=LNP58_09055;partial=true;pseudo=true;start_range=.,1898640 NZ_CP086372.1 Protein Homology CDS 1898640 1898865 . - 0 ID=cds-LNP58_RS09060;Parent=gene-LNP58_RS09060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167724.1;locus_tag=LNP58_RS09060;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1898640;transl_table=11 NZ_CP086372.1 RefSeq gene 1899247 1900707 . + . ID=gene-LNP58_RS09065;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LNP58_RS09065;old_locus_tag=LNP58_09060 NZ_CP086372.1 Protein Homology CDS 1899247 1900707 . + 0 ID=cds-WP_011407167.1;Parent=gene-LNP58_RS09065;Dbxref=Genbank:WP_011407167.1;Name=WP_011407167.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155968.1;locus_tag=LNP58_RS09065;product=cardiolipin synthase;protein_id=WP_011407167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1900782 1901051 . + . ID=gene-LNP58_RS09070;Name=LNP58_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09070;old_locus_tag=LNP58_09065 NZ_CP086372.1 Protein Homology CDS 1900782 1901051 . + 0 ID=cds-WP_019301610.1;Parent=gene-LNP58_RS09070;Dbxref=Genbank:WP_019301610.1;Name=WP_019301610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155969.1;locus_tag=LNP58_RS09070;product=hypothetical protein;protein_id=WP_019301610.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1901062 1901829 . + . ID=gene-LNP58_RS09075;Name=LNP58_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09075;old_locus_tag=LNP58_09070 NZ_CP086372.1 Protein Homology CDS 1901062 1901829 . + 0 ID=cds-WP_011407166.1;Parent=gene-LNP58_RS09075;Dbxref=Genbank:WP_011407166.1;Name=WP_011407166.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364763.1;locus_tag=LNP58_RS09075;product=pyridoxine 5'-phosphate synthase;protein_id=WP_011407166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1902125 1902538 . - . ID=gene-LNP58_RS09080;Name=LNP58_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09080;old_locus_tag=LNP58_09075 NZ_CP086372.1 Protein Homology CDS 1902125 1902538 . - 0 ID=cds-WP_011257016.1;Parent=gene-LNP58_RS09080;Dbxref=Genbank:WP_011257016.1;Name=WP_011257016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155972.1;locus_tag=LNP58_RS09080;product=biopolymer transporter ExbD;protein_id=WP_011257016.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1902542 1902964 . - . ID=gene-LNP58_RS09085;Name=LNP58_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09085;old_locus_tag=LNP58_09080 NZ_CP086372.1 Protein Homology CDS 1902542 1902964 . - 0 ID=cds-WP_010364790.1;Parent=gene-LNP58_RS09085;Dbxref=Genbank:WP_010364790.1;Name=WP_010364790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1;locus_tag=LNP58_RS09085;product=biopolymer transporter ExbD;protein_id=WP_010364790.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1903011 1903772 . - . ID=gene-LNP58_RS09090;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LNP58_RS09090;old_locus_tag=LNP58_09085 NZ_CP086372.1 Protein Homology CDS 1903011 1903772 . - 0 ID=cds-WP_011257015.1;Parent=gene-LNP58_RS09090;Dbxref=Genbank:WP_011257015.1;Name=WP_011257015.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1;locus_tag=LNP58_RS09090;product=TonB-system energizer ExbB;protein_id=WP_011257015.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1903857 1904414 . - . ID=gene-LNP58_RS09095;Name=LNP58_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09095;old_locus_tag=LNP58_09090 NZ_CP086372.1 Protein Homology CDS 1903857 1904414 . - 0 ID=cds-WP_075240306.1;Parent=gene-LNP58_RS09095;Dbxref=Genbank:WP_075240306.1;Name=WP_075240306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505935.1;locus_tag=LNP58_RS09095;product=energy transducer TonB;protein_id=WP_075240306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1904682 1905875 . - . ID=gene-LNP58_RS09100;Name=LNP58_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09100;old_locus_tag=LNP58_09095 NZ_CP086372.1 Protein Homology CDS 1904682 1905875 . - 0 ID=cds-WP_011257013.1;Parent=gene-LNP58_RS09100;Dbxref=Genbank:WP_011257013.1;Name=WP_011257013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1;locus_tag=LNP58_RS09100;product=tetratricopeptide repeat protein;protein_id=WP_011257013.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1906152 1906958 . - . ID=gene-LNP58_RS09105;Name=LNP58_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09105;old_locus_tag=LNP58_09100 NZ_CP086372.1 Protein Homology CDS 1906152 1906958 . - 0 ID=cds-WP_011407165.1;Parent=gene-LNP58_RS09105;Dbxref=Genbank:WP_011407165.1;Name=WP_011407165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901838.1;locus_tag=LNP58_RS09105;product=M48 family metallopeptidase;protein_id=WP_011407165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1907145 1907981 . - . ID=gene-LNP58_RS09110;Name=LNP58_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09110;old_locus_tag=LNP58_09105 NZ_CP086372.1 Protein Homology CDS 1907145 1907981 . - 0 ID=cds-WP_011407164.1;Parent=gene-LNP58_RS09110;Dbxref=Genbank:WP_011407164.1;Name=WP_011407164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971885.1;locus_tag=LNP58_RS09110;product=CPBP family intramembrane metalloprotease;protein_id=WP_011407164.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1908049 1910493 . - . ID=gene-LNP58_RS09115;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LNP58_RS09115;old_locus_tag=LNP58_09110 NZ_CP086372.1 Protein Homology CDS 1908049 1910493 . - 0 ID=cds-WP_011407163.1;Parent=gene-LNP58_RS09115;Dbxref=Genbank:WP_011407163.1;Name=WP_011407163.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1;locus_tag=LNP58_RS09115;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_011407163.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1910609 1911715 . - . ID=gene-LNP58_RS09120;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LNP58_RS09120;old_locus_tag=LNP58_09115 NZ_CP086372.1 Protein Homology CDS 1910609 1911715 . - 0 ID=cds-WP_011257009.1;Parent=gene-LNP58_RS09120;Dbxref=Genbank:WP_011257009.1;Name=WP_011257009.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501259.1;locus_tag=LNP58_RS09120;product=DNA replication/repair protein RecF;protein_id=WP_011257009.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1912967 1914067 . - . ID=gene-LNP58_RS09125;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LNP58_RS09125;old_locus_tag=LNP58_09120 NZ_CP086372.1 Protein Homology CDS 1912967 1914067 . - 0 ID=cds-WP_011257008.1;Parent=gene-LNP58_RS09125;Dbxref=Genbank:WP_011257008.1;Name=WP_011257008.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=LNP58_RS09125;product=DNA polymerase III subunit beta;protein_id=WP_011257008.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1914345 1915673 . - . ID=gene-LNP58_RS09130;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LNP58_RS09130;old_locus_tag=LNP58_09125 NZ_CP086372.1 Protein Homology CDS 1914345 1915673 . - 0 ID=cds-WP_011407161.1;Parent=gene-LNP58_RS09130;Dbxref=Genbank:WP_011407161.1;Name=WP_011407161.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1;locus_tag=LNP58_RS09130;product=chromosomal replication initiator protein DnaA;protein_id=WP_011407161.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1915916 1916056 . + . ID=gene-LNP58_RS09135;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LNP58_RS09135;old_locus_tag=LNP58_09130 NZ_CP086372.1 Protein Homology CDS 1915916 1916056 . + 0 ID=cds-WP_002805908.1;Parent=gene-LNP58_RS09135;Dbxref=Genbank:WP_002805908.1;Name=WP_002805908.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404565.1;locus_tag=LNP58_RS09135;product=50S ribosomal protein L34;protein_id=WP_002805908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1916095 1916532 . + . ID=gene-LNP58_RS09140;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LNP58_RS09140;old_locus_tag=LNP58_09135 NZ_CP086372.1 Protein Homology CDS 1916095 1916532 . + 0 ID=cds-WP_011409863.1;Parent=gene-LNP58_RS09140;Dbxref=Genbank:WP_011409863.1;Name=WP_011409863.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052928.1;locus_tag=LNP58_RS09140;product=ribonuclease P protein component;protein_id=WP_011409863.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1916558 1918294 . + . ID=gene-LNP58_RS09145;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LNP58_RS09145;old_locus_tag=LNP58_09140 NZ_CP086372.1 Protein Homology CDS 1916558 1918294 . + 0 ID=cds-WP_011409862.1;Parent=gene-LNP58_RS09145;Dbxref=Genbank:WP_011409862.1;Name=WP_011409862.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482225.1;locus_tag=LNP58_RS09145;product=membrane protein insertase YidC;protein_id=WP_011409862.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1918373 1921075 . + . ID=gene-LNP58_RS09150;Name=LNP58_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09150;old_locus_tag=LNP58_09145 NZ_CP086372.1 Protein Homology CDS 1918373 1921075 . + 0 ID=cds-WP_011409861.1;Parent=gene-LNP58_RS09150;Dbxref=Genbank:WP_011409861.1;Name=WP_011409861.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927165.1;locus_tag=LNP58_RS09150;product=polysaccharide deacetylase family protein;protein_id=WP_011409861.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1921240 1922580 . + . ID=gene-LNP58_RS09155;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LNP58_RS09155;old_locus_tag=LNP58_09150 NZ_CP086372.1 Protein Homology CDS 1921240 1922580 . + 0 ID=cds-WP_044757272.1;Parent=gene-LNP58_RS09155;Dbxref=Genbank:WP_044757272.1;Name=WP_044757272.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349216.1;locus_tag=LNP58_RS09155;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_044757272.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1922739 1923596 . - . ID=gene-LNP58_RS09160;Name=LNP58_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09160;old_locus_tag=LNP58_09155 NZ_CP086372.1 Protein Homology CDS 1922739 1923596 . - 0 ID=cds-WP_011409859.1;Parent=gene-LNP58_RS09160;Dbxref=Genbank:WP_011409859.1;Name=WP_011409859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971341.1;locus_tag=LNP58_RS09160;product=phosphatase PAP2 family protein;protein_id=WP_011409859.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1923837 1926088 . + . ID=gene-LNP58_RS09165;Name=LNP58_RS09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09165;old_locus_tag=LNP58_09160;pseudo=true NZ_CP086372.1 Protein Homology CDS 1923837 1926088 . + 0 ID=cds-LNP58_RS09165;Parent=gene-LNP58_RS09165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482233.1;locus_tag=LNP58_RS09165;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1926322 1927422 . + . ID=gene-LNP58_RS09170;Name=LNP58_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09170;old_locus_tag=LNP58_09165 NZ_CP086372.1 Protein Homology CDS 1926322 1927422 . + 0 ID=cds-WP_011409856.1;Parent=gene-LNP58_RS09170;Dbxref=Genbank:WP_011409856.1;Name=WP_011409856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155987.1;locus_tag=LNP58_RS09170;product=glycerophosphodiester phosphodiesterase;protein_id=WP_011409856.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1927552 1928337 . - . ID=gene-LNP58_RS09175;Name=LNP58_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09175;old_locus_tag=LNP58_09170 NZ_CP086372.1 Protein Homology CDS 1927552 1928337 . - 0 ID=cds-WP_011260886.1;Parent=gene-LNP58_RS09175;Dbxref=Genbank:WP_011260886.1;Name=WP_011260886.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505371.1;locus_tag=LNP58_RS09175;product=rhomboid family intramembrane serine protease;protein_id=WP_011260886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1928712 1929668 . - . ID=gene-LNP58_RS09180;Name=LNP58_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09180;old_locus_tag=LNP58_09175 NZ_CP086372.1 Protein Homology CDS 1928712 1929668 . - 0 ID=cds-WP_011260885.1;Parent=gene-LNP58_RS09180;Dbxref=Genbank:WP_011260885.1;Name=WP_011260885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912402.1;locus_tag=LNP58_RS09180;product=TerC family protein;protein_id=WP_011260885.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1929931 1931097 . + . ID=gene-LNP58_RS09185;Name=LNP58_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09185;old_locus_tag=LNP58_09180 NZ_CP086372.1 Protein Homology CDS 1929931 1931097 . + 0 ID=cds-WP_069960064.1;Parent=gene-LNP58_RS09185;Dbxref=Genbank:WP_069960064.1;Name=WP_069960064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155989.1;locus_tag=LNP58_RS09185;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_069960064.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1931216 1931536 . + . ID=gene-LNP58_RS09190;Name=LNP58_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09190;old_locus_tag=LNP58_09185 NZ_CP086372.1 Protein Homology CDS 1931216 1931536 . + 0 ID=cds-WP_069960063.1;Parent=gene-LNP58_RS09190;Dbxref=Genbank:WP_069960063.1;Name=WP_069960063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505368.1;locus_tag=LNP58_RS09190;product=hypothetical protein;protein_id=WP_069960063.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1931810 1933073 . + . ID=gene-LNP58_RS09195;Name=LNP58_RS09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09195;old_locus_tag=LNP58_09190;pseudo=true NZ_CP086372.1 Protein Homology CDS 1931810 1933073 . + 0 ID=cds-LNP58_RS09195;Parent=gene-LNP58_RS09195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482262.1;locus_tag=LNP58_RS09195;product=dipeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1933450 1934760 . + . ID=gene-LNP58_RS09200;Name=LNP58_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09200;old_locus_tag=LNP58_09195 NZ_CP086372.1 Protein Homology CDS 1933450 1934760 . + 0 ID=cds-WP_069960119.1;Parent=gene-LNP58_RS09200;Dbxref=Genbank:WP_069960119.1;Name=WP_069960119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160000.1;locus_tag=LNP58_RS09200;product=MFS transporter;protein_id=WP_069960119.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1934786 1935955 . + . ID=gene-LNP58_RS09205;Name=LNP58_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09205;old_locus_tag=LNP58_09200 NZ_CP086372.1 Protein Homology CDS 1934786 1935955 . + 0 ID=cds-WP_044757270.1;Parent=gene-LNP58_RS09205;Dbxref=Genbank:WP_044757270.1;Name=WP_044757270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118145.1;locus_tag=LNP58_RS09205;product=glycerate kinase;protein_id=WP_044757270.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1936198 1936846 . + . ID=gene-LNP58_RS09210;Name=LNP58_RS09210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09210;old_locus_tag=LNP58_09205;pseudo=true NZ_CP086372.1 Protein Homology CDS 1936198 1936846 . + 0 ID=cds-LNP58_RS09210;Parent=gene-LNP58_RS09210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364873.1;locus_tag=LNP58_RS09210;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1936988 1937173 . + . ID=gene-LNP58_RS09215;Name=LNP58_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09215;old_locus_tag=LNP58_09210 NZ_CP086372.1 GeneMarkS-2+ CDS 1936988 1937173 . + 0 ID=cds-WP_012446478.1;Parent=gene-LNP58_RS09215;Dbxref=Genbank:WP_012446478.1;Name=WP_012446478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09215;product=hypothetical protein;protein_id=WP_012446478.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1937267 1937390 . + . ID=gene-LNP58_RS09220;Name=LNP58_RS09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09220;old_locus_tag=LNP58_09215;partial=true;pseudo=true;start_range=.,1937267 NZ_CP086372.1 Protein Homology CDS 1937267 1937390 . + 0 ID=cds-LNP58_RS09220;Parent=gene-LNP58_RS09220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050089.1;locus_tag=LNP58_RS09220;partial=true;product=CsbD family protein;pseudo=true;start_range=.,1937267;transl_table=11 NZ_CP086372.1 RefSeq gene 1938070 1938291 . + . ID=gene-LNP58_RS09225;Name=LNP58_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09225;old_locus_tag=LNP58_09220 NZ_CP086372.1 Protein Homology CDS 1938070 1938291 . + 0 ID=cds-WP_069960118.1;Parent=gene-LNP58_RS09225;Dbxref=Genbank:WP_069960118.1;Name=WP_069960118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921785.1;locus_tag=LNP58_RS09225;product=hypothetical protein;protein_id=WP_069960118.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1938589 1939296 . + . ID=gene-LNP58_RS09230;Name=LNP58_RS09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09230;old_locus_tag=LNP58_09225;partial=true;pseudo=true;start_range=.,1938589 NZ_CP086372.1 Protein Homology CDS 1938589 1939296 . + 0 ID=cds-LNP58_RS09230;Parent=gene-LNP58_RS09230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS09230;partial=true;product=transposase;pseudo=true;start_range=.,1938589;transl_table=11 NZ_CP086372.1 RefSeq gene 1939628 1940038 . + . ID=gene-LNP58_RS09235;Name=LNP58_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09235;old_locus_tag=LNP58_09230 NZ_CP086372.1 Protein Homology CDS 1939628 1940038 . + 0 ID=cds-WP_027704109.1;Parent=gene-LNP58_RS09235;Dbxref=Genbank:WP_027704109.1;Name=WP_027704109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=LNP58_RS09235;product=PAAR domain-containing protein;protein_id=WP_027704109.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1939987 1940544 . + . ID=gene-LNP58_RS09240;Name=LNP58_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09240;old_locus_tag=LNP58_09235 NZ_CP086372.1 Protein Homology CDS 1939987 1940544 . + 0 ID=cds-WP_052658706.1;Parent=gene-LNP58_RS09240;Dbxref=Genbank:WP_052658706.1;Name=WP_052658706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258481.1;locus_tag=LNP58_RS09240;product=DUF4123 domain-containing protein;protein_id=WP_052658706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1940525 1940866 . + . ID=gene-LNP58_RS09245;Name=LNP58_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09245;old_locus_tag=LNP58_09240 NZ_CP086372.1 Protein Homology CDS 1940525 1940866 . + 0 ID=cds-WP_041182345.1;Parent=gene-LNP58_RS09245;Dbxref=Genbank:WP_041182345.1;Name=WP_041182345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=LNP58_RS09245;product=hypothetical protein;protein_id=WP_041182345.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1940880 1941587 . + . ID=gene-LNP58_RS09250;Name=LNP58_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09250;old_locus_tag=LNP58_09245 NZ_CP086372.1 Protein Homology CDS 1940880 1941587 . + 0 ID=cds-WP_011409848.1;Parent=gene-LNP58_RS09250;Dbxref=Genbank:WP_011409848.1;Name=WP_011409848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408157.1;locus_tag=LNP58_RS09250;product=Tox-REase-5 domain-containing protein;protein_id=WP_011409848.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1941584 1942336 . + . ID=gene-LNP58_RS09255;Name=LNP58_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09255;old_locus_tag=LNP58_09250 NZ_CP086372.1 Protein Homology CDS 1941584 1942336 . + 0 ID=cds-WP_049756351.1;Parent=gene-LNP58_RS09255;Dbxref=Genbank:WP_049756351.1;Name=WP_049756351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026917.2;locus_tag=LNP58_RS09255;product=Imm52 family immunity protein;protein_id=WP_049756351.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1942493 1942750 . + . ID=gene-LNP58_RS09260;Name=LNP58_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09260;old_locus_tag=LNP58_09255 NZ_CP086372.1 GeneMarkS-2+ CDS 1942493 1942750 . + 0 ID=cds-WP_228329598.1;Parent=gene-LNP58_RS09260;Dbxref=Genbank:WP_228329598.1;Name=WP_228329598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09260;product=hypothetical protein;protein_id=WP_228329598.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1942866 1944224 . + . ID=gene-LNP58_RS09265;Name=LNP58_RS09265;end_range=1944224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09265;old_locus_tag=LNP58_09260;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1942866 1944224 . + 0 ID=cds-LNP58_RS09265;Parent=gene-LNP58_RS09265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1944224,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS09265;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1944236 1944460 . + . ID=gene-LNP58_RS09270;Name=LNP58_RS09270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09270;old_locus_tag=LNP58_09265;partial=true;pseudo=true;start_range=.,1944236 NZ_CP086372.1 Protein Homology CDS 1944236 1944460 . + 0 ID=cds-LNP58_RS09270;Parent=gene-LNP58_RS09270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS09270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1944236;transl_table=11 NZ_CP086372.1 RefSeq gene 1944688 1945800 . - . ID=gene-LNP58_RS09275;Name=LNP58_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09275;old_locus_tag=LNP58_09270 NZ_CP086372.1 Protein Homology CDS 1944688 1945800 . - 0 ID=cds-WP_069960059.1;Parent=gene-LNP58_RS09275;Dbxref=Genbank:WP_069960059.1;Name=WP_069960059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158361.1;locus_tag=LNP58_RS09275;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_069960059.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1945787 1945993 . - . ID=gene-LNP58_RS09280;Name=LNP58_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09280;old_locus_tag=LNP58_09275 NZ_CP086372.1 Protein Homology CDS 1945787 1945993 . - 0 ID=cds-WP_069960058.1;Parent=gene-LNP58_RS09280;Dbxref=Genbank:WP_069960058.1;Name=WP_069960058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364297.1;locus_tag=LNP58_RS09280;product=hypothetical protein;protein_id=WP_069960058.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1946267 1946773 . + . ID=gene-LNP58_RS09285;Name=LNP58_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09285;old_locus_tag=LNP58_09280 NZ_CP086372.1 Protein Homology CDS 1946267 1946773 . + 0 ID=cds-WP_165967665.1;Parent=gene-LNP58_RS09285;Dbxref=Genbank:WP_165967665.1;Name=WP_165967665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409841.1;locus_tag=LNP58_RS09285;product=hypothetical protein;protein_id=WP_165967665.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1946804 1947577 . - . ID=gene-LNP58_RS09290;Name=LNP58_RS09290;end_range=1947577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09290;old_locus_tag=LNP58_09285;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1946804 1947577 . - 0 ID=cds-LNP58_RS09290;Parent=gene-LNP58_RS09290;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1947577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238145.1;locus_tag=LNP58_RS09290;partial=true;product=phospholipase D-like domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1947607 1948129 . + . ID=gene-LNP58_RS09295;Name=LNP58_RS09295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09295;old_locus_tag=LNP58_09290;pseudo=true NZ_CP086372.1 Protein Homology CDS 1947607 1948129 . + 0 ID=cds-LNP58_RS09295;Parent=gene-LNP58_RS09295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158362.1;locus_tag=LNP58_RS09295;product=YdeI/OmpD-associated family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1948243 1949604 . + . ID=gene-LNP58_RS09300;Name=LNP58_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09300;old_locus_tag=LNP58_09295 NZ_CP086372.1 Protein Homology CDS 1948243 1949604 . + 0 ID=cds-WP_011409838.1;Parent=gene-LNP58_RS09300;Dbxref=Genbank:WP_011409838.1;Name=WP_011409838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301716.1;locus_tag=LNP58_RS09300;product=MFS transporter;protein_id=WP_011409838.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1949880 1950446 . - . ID=gene-LNP58_RS09305;Name=LNP58_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09305;old_locus_tag=LNP58_09300 NZ_CP086372.1 Protein Homology CDS 1949880 1950446 . - 0 ID=cds-WP_011409837.1;Parent=gene-LNP58_RS09305;Dbxref=Genbank:WP_011409837.1;Name=WP_011409837.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301717.1;locus_tag=LNP58_RS09305;product=FUSC family protein;protein_id=WP_011409837.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1950443 1950832 . - . ID=gene-LNP58_RS09310;Name=LNP58_RS09310;end_range=1950832,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09310;old_locus_tag=LNP58_09305;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1950443 1950832 . - 0 ID=cds-LNP58_RS09310;Parent=gene-LNP58_RS09310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0015562;end_range=1950832,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349148.1;locus_tag=LNP58_RS09310;partial=true;product=TolC family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1951063 1951203 . - . ID=gene-LNP58_RS09315;Name=LNP58_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09315;old_locus_tag=LNP58_09310 NZ_CP086372.1 Protein Homology CDS 1951063 1951203 . - 0 ID=cds-WP_228329597.1;Parent=gene-LNP58_RS09315;Dbxref=Genbank:WP_228329597.1;Name=WP_228329597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364281.1;locus_tag=LNP58_RS09315;product=DUF1656 domain-containing protein;protein_id=WP_228329597.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1951188 1951307 . - . ID=gene-LNP58_RS09320;Name=LNP58_RS09320;end_range=1951307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09320;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1951188 1951307 . - 0 ID=cds-LNP58_RS09320;Parent=gene-LNP58_RS09320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1951307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158363.1;locus_tag=LNP58_RS09320;partial=true;product=DUF1656 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1951313 1951530 . - . ID=gene-LNP58_RS09325;Name=LNP58_RS09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09325;pseudo=true NZ_CP086372.1 Protein Homology CDS 1951313 1951530 . - 0 ID=cds-LNP58_RS09325;Parent=gene-LNP58_RS09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158363.1;locus_tag=LNP58_RS09325;product=DUF1656 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1951572 1952018 . - . ID=gene-LNP58_RS09330;Name=LNP58_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09330;old_locus_tag=LNP58_09320 NZ_CP086372.1 Protein Homology CDS 1951572 1952018 . - 0 ID=cds-WP_228329753.1;Parent=gene-LNP58_RS09330;Dbxref=Genbank:WP_228329753.1;Name=WP_228329753.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452469.1;locus_tag=LNP58_RS09330;product=MarR family transcriptional regulator;protein_id=WP_228329753.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1952191 1952793 . + . ID=gene-LNP58_RS09335;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LNP58_RS09335;old_locus_tag=LNP58_09325 NZ_CP086372.1 Protein Homology CDS 1952191 1952793 . + 0 ID=cds-WP_041182832.1;Parent=gene-LNP58_RS09335;Dbxref=Genbank:WP_041182832.1;Name=WP_041182832.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158364.1;locus_tag=LNP58_RS09335;product=GTP cyclohydrolase I FolE;protein_id=WP_041182832.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1952867 1954063 . + . ID=gene-LNP58_RS09340;Name=LNP58_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09340;old_locus_tag=LNP58_09330 NZ_CP086372.1 Protein Homology CDS 1952867 1954063 . + 0 ID=cds-WP_011409833.1;Parent=gene-LNP58_RS09340;Dbxref=Genbank:WP_011409833.1;Name=WP_011409833.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381256.1;locus_tag=LNP58_RS09340;product=AAA family ATPase;protein_id=WP_011409833.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1954102 1954650 . + . ID=gene-LNP58_RS09345;Name=LNP58_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09345;old_locus_tag=LNP58_09335 NZ_CP086372.1 Protein Homology CDS 1954102 1954650 . + 0 ID=cds-WP_229001928.1;Parent=gene-LNP58_RS09345;Dbxref=Genbank:WP_229001928.1;Name=WP_229001928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409832.1;locus_tag=LNP58_RS09345;product=DUF4276 family protein;protein_id=WP_229001928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1954647 1956119 . + . ID=gene-LNP58_RS09350;Name=LNP58_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09350;old_locus_tag=LNP58_09340 NZ_CP086372.1 Protein Homology CDS 1954647 1956119 . + 0 ID=cds-WP_011409831.1;Parent=gene-LNP58_RS09350;Dbxref=Genbank:WP_011409831.1;Name=WP_011409831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301721.1;locus_tag=LNP58_RS09350;product=DUF3375 domain-containing protein;protein_id=WP_011409831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1956103 1956801 . + . ID=gene-LNP58_RS09355;Name=LNP58_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09355;old_locus_tag=LNP58_09345 NZ_CP086372.1 Protein Homology CDS 1956103 1956801 . + 0 ID=cds-WP_011409830.1;Parent=gene-LNP58_RS09355;Dbxref=Genbank:WP_011409830.1;Name=WP_011409830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260861.1;locus_tag=LNP58_RS09355;product=DUF4194 domain-containing protein;protein_id=WP_011409830.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1956949 1960380 . + . ID=gene-LNP58_RS09360;Name=LNP58_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09360;old_locus_tag=LNP58_09350 NZ_CP086372.1 Protein Homology CDS 1956949 1960380 . + 0 ID=cds-WP_011409829.1;Parent=gene-LNP58_RS09360;Dbxref=Genbank:WP_011409829.1;Name=WP_011409829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446454.1;locus_tag=LNP58_RS09360;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_011409829.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1960478 1961659 . + . ID=gene-LNP58_RS09365;Name=LNP58_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09365;old_locus_tag=LNP58_09355 NZ_CP086372.1 Protein Homology CDS 1960478 1961659 . + 0 ID=cds-WP_042465377.1;Parent=gene-LNP58_RS09365;Dbxref=Genbank:WP_042465377.1;Name=WP_042465377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112489.1;locus_tag=LNP58_RS09365;product=DUF3322 and DUF2220 domain-containing protein;protein_id=WP_042465377.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1961707 1962882 . - . ID=gene-LNP58_RS09370;Name=LNP58_RS09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09370;old_locus_tag=LNP58_09360;partial=true;pseudo=true;start_range=.,1961707 NZ_CP086372.1 Protein Homology CDS 1961707 1962882 . - 0 ID=cds-LNP58_RS09370;Parent=gene-LNP58_RS09370;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS09370;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1961707;transl_table=11 NZ_CP086372.1 RefSeq gene 1963072 1964391 . + . ID=gene-LNP58_RS09375;Name=LNP58_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09375;old_locus_tag=LNP58_09365 NZ_CP086372.1 Protein Homology CDS 1963072 1964391 . + 0 ID=cds-WP_011409361.1;Parent=gene-LNP58_RS09375;Dbxref=Genbank:WP_011409361.1;Name=WP_011409361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS09375;product=IS701-like element ISXo15 family transposase;protein_id=WP_011409361.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1964570 1964911 . + . ID=gene-LNP58_RS09380;Name=LNP58_RS09380;end_range=1964911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09380;old_locus_tag=LNP58_09370;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1964570 1964911 . + 0 ID=cds-LNP58_RS09380;Parent=gene-LNP58_RS09380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1964911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166071.1;locus_tag=LNP58_RS09380;partial=true;product=PepSY domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1965068 1966879 . - . ID=gene-LNP58_RS09385;Name=LNP58_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09385;old_locus_tag=LNP58_09375 NZ_CP086372.1 Protein Homology CDS 1965068 1966879 . - 0 ID=cds-WP_011409825.1;Parent=gene-LNP58_RS09385;Dbxref=Genbank:WP_011409825.1;Name=WP_011409825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118134.1;locus_tag=LNP58_RS09385;product=M28 family metallopeptidase;protein_id=WP_011409825.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1967030 1967686 . - . ID=gene-LNP58_RS09390;Name=LNP58_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09390;old_locus_tag=LNP58_09380 NZ_CP086372.1 Protein Homology CDS 1967030 1967686 . - 0 ID=cds-WP_011260853.1;Parent=gene-LNP58_RS09390;Dbxref=Genbank:WP_011260853.1;Name=WP_011260853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260853.1;locus_tag=LNP58_RS09390;product=hypothetical protein;protein_id=WP_011260853.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1967784 1969082 . + . ID=gene-LNP58_RS09395;Name=LNP58_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09395;old_locus_tag=LNP58_09385 NZ_CP086372.1 Protein Homology CDS 1967784 1969082 . + 0 ID=cds-WP_027703885.1;Parent=gene-LNP58_RS09395;Dbxref=Genbank:WP_027703885.1;Name=WP_027703885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850464.1;locus_tag=LNP58_RS09395;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_027703885.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1969187 1970710 . + . ID=gene-LNP58_RS09400;Name=LNP58_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09400;old_locus_tag=LNP58_09390 NZ_CP086372.1 Protein Homology CDS 1969187 1970710 . + 0 ID=cds-WP_011409823.1;Parent=gene-LNP58_RS09400;Dbxref=Genbank:WP_011409823.1;Name=WP_011409823.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376383.1;locus_tag=LNP58_RS09400;product=S41 family peptidase;protein_id=WP_011409823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1970715 1970791 . - . ID=gene-LNP58_RS09405;Name=LNP58_RS09405;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS09405;old_locus_tag=LNP58_09395 NZ_CP086372.1 cmsearch ncRNA 1970715 1970791 . - . ID=rna-LNP58_RS09405;Parent=gene-LNP58_RS09405;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09405;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 1970715 1970791 . - . ID=exon-LNP58_RS09405-1;Parent=rna-LNP58_RS09405;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09405;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 1971017 1972009 . - . ID=gene-LNP58_RS09410;Name=LNP58_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09410;old_locus_tag=LNP58_09400 NZ_CP086372.1 Protein Homology CDS 1971017 1972009 . - 0 ID=cds-WP_011260850.1;Parent=gene-LNP58_RS09410;Dbxref=Genbank:WP_011260850.1;Name=WP_011260850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482169.1;locus_tag=LNP58_RS09410;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_011260850.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1972009 1972329 . - . ID=gene-LNP58_RS09415;Name=LNP58_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09415;old_locus_tag=LNP58_09405 NZ_CP086372.1 Protein Homology CDS 1972009 1972329 . - 0 ID=cds-WP_011409822.1;Parent=gene-LNP58_RS09415;Dbxref=Genbank:WP_011409822.1;Name=WP_011409822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1;locus_tag=LNP58_RS09415;product=DUF1820 family protein;protein_id=WP_011409822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1972446 1973138 . - . ID=gene-LNP58_RS09420;Name=LNP58_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09420;old_locus_tag=LNP58_09410 NZ_CP086372.1 Protein Homology CDS 1972446 1973138 . - 0 ID=cds-WP_011409821.1;Parent=gene-LNP58_RS09420;Dbxref=Genbank:WP_011409821.1;Name=WP_011409821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1;locus_tag=LNP58_RS09420;product=rhomboid family intramembrane serine protease;protein_id=WP_011409821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1973355 1974695 . + . ID=gene-LNP58_RS09425;Name=LNP58_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09425;old_locus_tag=LNP58_09415 NZ_CP086372.1 Protein Homology CDS 1973355 1974695 . + 0 ID=cds-WP_011409820.1;Parent=gene-LNP58_RS09425;Dbxref=Genbank:WP_011409820.1;Name=WP_011409820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968187.1;locus_tag=LNP58_RS09425;product=outer membrane protein transport protein;protein_id=WP_011409820.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1975054 1975365 . + . ID=gene-LNP58_RS09430;Name=LNP58_RS09430;end_range=1975365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09430;old_locus_tag=LNP58_09420;partial=true;pseudo=true;start_range=.,1975054 NZ_CP086372.1 Protein Homology CDS 1975054 1975365 . + 0 ID=cds-LNP58_RS09430;Parent=gene-LNP58_RS09430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1975365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482181.1;locus_tag=LNP58_RS09430;partial=true;product=2OG-Fe(II) oxygenase;pseudo=true;start_range=.,1975054;transl_table=11 NZ_CP086372.1 RefSeq gene 1975551 1976678 . + . ID=gene-LNP58_RS09435;Name=LNP58_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09435;old_locus_tag=LNP58_09425 NZ_CP086372.1 Protein Homology CDS 1975551 1976678 . + 0 ID=cds-WP_011260845.1;Parent=gene-LNP58_RS09435;Dbxref=Genbank:WP_011260845.1;Name=WP_011260845.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088871.1;locus_tag=LNP58_RS09435;product=PA0069 family radical SAM protein;protein_id=WP_011260845.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1976951 1978269 . - . ID=gene-LNP58_RS09440;Name=LNP58_RS09440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09440;old_locus_tag=LNP58_09430;pseudo=true NZ_CP086372.1 Protein Homology CDS 1976951 1978269 . - 0 ID=cds-LNP58_RS09440;Parent=gene-LNP58_RS09440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS09440;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1978459 1979835 . + . ID=gene-LNP58_RS09445;Name=LNP58_RS09445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09445;old_locus_tag=LNP58_09435;pseudo=true NZ_CP086372.1 Protein Homology CDS 1978459 1979835 . + 0 ID=cds-LNP58_RS09445;Parent=gene-LNP58_RS09445;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS09445;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1979931 1980476 . - . ID=gene-LNP58_RS09450;Name=LNP58_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09450;old_locus_tag=LNP58_09440 NZ_CP086372.1 Protein Homology CDS 1979931 1980476 . - 0 ID=cds-WP_011409815.1;Parent=gene-LNP58_RS09450;Dbxref=Genbank:WP_011409815.1;Name=WP_011409815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409815.1;locus_tag=LNP58_RS09450;product=glutathione peroxidase;protein_id=WP_011409815.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1980854 1981216 . - . ID=gene-LNP58_RS09455;Name=LNP58_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09455;old_locus_tag=LNP58_09445 NZ_CP086372.1 Protein Homology CDS 1980854 1981216 . - 0 ID=cds-WP_041182970.1;Parent=gene-LNP58_RS09455;Dbxref=Genbank:WP_041182970.1;Name=WP_041182970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349194.1;locus_tag=LNP58_RS09455;product=hypothetical protein;protein_id=WP_041182970.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1981622 1983118 . - . ID=gene-LNP58_RS09460;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LNP58_RS09460;old_locus_tag=LNP58_09450 NZ_CP086372.1 Protein Homology CDS 1981622 1983118 . - 0 ID=cds-WP_027704005.1;Parent=gene-LNP58_RS09460;Dbxref=Genbank:WP_027704005.1;Name=WP_027704005.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156007.1;locus_tag=LNP58_RS09460;product=DNA recombination protein RmuC;protein_id=WP_027704005.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1983303 1983958 . - . ID=gene-LNP58_RS09465;Name=LNP58_RS09465;end_range=1983958,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09465;old_locus_tag=LNP58_09455;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1983303 1983958 . - 0 ID=cds-LNP58_RS09465;Parent=gene-LNP58_RS09465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006113,GO:0004024,GO:0008270;end_range=1983958,.;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573087.1;locus_tag=LNP58_RS09465;partial=true;product=zinc-binding alcohol dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1984437 1985852 . + . ID=gene-LNP58_RS09470;Name=LNP58_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09470;old_locus_tag=LNP58_09460 NZ_CP086372.1 Protein Homology CDS 1984437 1985852 . + 0 ID=cds-WP_011409811.1;Parent=gene-LNP58_RS09470;Dbxref=Genbank:WP_011409811.1;Name=WP_011409811.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482277.1;locus_tag=LNP58_RS09470;product=amino acid permease;protein_id=WP_011409811.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1986028 1986993 . + . ID=gene-LNP58_RS09475;Name=LNP58_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09475;old_locus_tag=LNP58_09465 NZ_CP086372.1 Protein Homology CDS 1986028 1986993 . + 0 ID=cds-WP_109182049.1;Parent=gene-LNP58_RS09475;Dbxref=Genbank:WP_109182049.1;Name=WP_109182049.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS09475;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182049.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1987574 1987798 . + . ID=gene-LNP58_RS09480;Name=LNP58_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09480;old_locus_tag=LNP58_09470 NZ_CP086372.1 Protein Homology CDS 1987574 1987798 . + 0 ID=cds-WP_012446438.1;Parent=gene-LNP58_RS09480;Dbxref=Genbank:WP_012446438.1;Name=WP_012446438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373694.1;locus_tag=LNP58_RS09480;product=hypothetical protein;protein_id=WP_012446438.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1987974 1990160 . - . ID=gene-LNP58_RS09485;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=LNP58_RS09485;old_locus_tag=LNP58_09475 NZ_CP086372.1 Protein Homology CDS 1987974 1990160 . - 0 ID=cds-WP_011260838.1;Parent=gene-LNP58_RS09485;Dbxref=Genbank:WP_011260838.1;Name=WP_011260838.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809467.1;locus_tag=LNP58_RS09485;product=DNA helicase II;protein_id=WP_011260838.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1990508 1991902 . - . ID=gene-LNP58_RS09490;Name=LNP58_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09490;old_locus_tag=LNP58_09480 NZ_CP086372.1 Protein Homology CDS 1990508 1991902 . - 0 ID=cds-WP_011409808.1;Parent=gene-LNP58_RS09490;Dbxref=Genbank:WP_011409808.1;Name=WP_011409808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446436.1;locus_tag=LNP58_RS09490;product=FAD/NAD(P)-binding protein;protein_id=WP_011409808.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1992069 1992403 . + . ID=gene-LNP58_RS09495;Name=LNP58_RS09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09495;old_locus_tag=LNP58_09485;pseudo=true NZ_CP086372.1 Protein Homology CDS 1992069 1992403 . + 0 ID=cds-LNP58_RS09495;Parent=gene-LNP58_RS09495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301189.1;locus_tag=LNP58_RS09495;product=glyoxalase/bleomycin resistance/dioxygenase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1992474 1993892 . - . ID=gene-LNP58_RS09500;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LNP58_RS09500;old_locus_tag=LNP58_09490 NZ_CP086372.1 Protein Homology CDS 1992474 1993892 . - 0 ID=cds-WP_011409807.1;Parent=gene-LNP58_RS09500;Dbxref=Genbank:WP_011409807.1;Name=WP_011409807.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902730.1;locus_tag=LNP58_RS09500;product=cardiolipin synthase;protein_id=WP_011409807.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1993909 1995216 . - . ID=gene-LNP58_RS09505;Name=LNP58_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09505;old_locus_tag=LNP58_09495 NZ_CP086372.1 Protein Homology CDS 1993909 1995216 . - 0 ID=cds-WP_011260833.1;Parent=gene-LNP58_RS09505;Dbxref=Genbank:WP_011260833.1;Name=WP_011260833.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157746.1;locus_tag=LNP58_RS09505;product=LysR family transcriptional regulator;protein_id=WP_011260833.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1995314 1995985 . + . ID=gene-LNP58_RS09510;Name=LNP58_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09510;old_locus_tag=LNP58_09500 NZ_CP086372.1 Protein Homology CDS 1995314 1995985 . + 0 ID=cds-WP_011260832.1;Parent=gene-LNP58_RS09510;Dbxref=Genbank:WP_011260832.1;Name=WP_011260832.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489876.1;locus_tag=LNP58_RS09510;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_011260832.1;transl_table=11 NZ_CP086372.1 RefSeq gene 1995978 1997033 . + . ID=gene-LNP58_RS09515;Name=LNP58_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09515;old_locus_tag=LNP58_09505 NZ_CP086372.1 Protein Homology CDS 1995978 1997033 . + 0 ID=cds-WP_011260831.1;Parent=gene-LNP58_RS09515;Dbxref=Genbank:WP_011260831.1;Name=WP_011260831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091428.1;locus_tag=LNP58_RS09515;product=4-oxalomesaconate tautomerase;protein_id=WP_011260831.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1997262 1997843 . + . ID=gene-LNP58_RS09520;Name=LNP58_RS09520;end_range=1997843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09520;old_locus_tag=LNP58_09510;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 1997262 1997843 . + 0 ID=cds-LNP58_RS09520;Parent=gene-LNP58_RS09520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1997843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572519.1;locus_tag=LNP58_RS09520;partial=true;product=amidohydrolase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 1997905 1999140 . + . ID=gene-LNP58_RS09525;Name=LNP58_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09525;old_locus_tag=LNP58_09515 NZ_CP086372.1 Protein Homology CDS 1997905 1999140 . + 0 ID=cds-WP_011257310.1-2;Parent=gene-LNP58_RS09525;Dbxref=Genbank:WP_011257310.1;Name=WP_011257310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS09525;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257310.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 1999152 1999604 . + . ID=gene-LNP58_RS09530;Name=LNP58_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09530;old_locus_tag=LNP58_09520;partial=true;pseudo=true;start_range=.,1999152 NZ_CP086372.1 Protein Homology CDS 1999152 1999604 . + 0 ID=cds-LNP58_RS09530;Parent=gene-LNP58_RS09530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572519.1;locus_tag=LNP58_RS09530;partial=true;product=amidohydrolase family protein;pseudo=true;start_range=.,1999152;transl_table=11 NZ_CP086372.1 RefSeq gene 2000037 2000204 . - . ID=gene-LNP58_RS09535;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LNP58_RS09535;old_locus_tag=LNP58_09525 NZ_CP086372.1 Protein Homology CDS 2000037 2000204 . - 0 ID=cds-WP_002809462.1;Parent=gene-LNP58_RS09535;Dbxref=Genbank:WP_002809462.1;Name=WP_002809462.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=LNP58_RS09535;product=50S ribosomal protein L33;protein_id=WP_002809462.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2000218 2000454 . - . ID=gene-LNP58_RS09540;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LNP58_RS09540;old_locus_tag=LNP58_09530 NZ_CP086372.1 Protein Homology CDS 2000218 2000454 . - 0 ID=cds-WP_002809459.1;Parent=gene-LNP58_RS09540;Dbxref=Genbank:WP_002809459.1;Name=WP_002809459.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=LNP58_RS09540;product=50S ribosomal protein L28;protein_id=WP_002809459.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2000639 2000998 . - . ID=gene-LNP58_RS09545;Name=LNP58_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09545;old_locus_tag=LNP58_09535 NZ_CP086372.1 GeneMarkS-2+ CDS 2000639 2000998 . - 0 ID=cds-WP_011409805.1;Parent=gene-LNP58_RS09545;Dbxref=Genbank:WP_011409805.1;Name=WP_011409805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09545;product=hypothetical protein;protein_id=WP_011409805.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2001303 2001713 . - . ID=gene-LNP58_RS09550;Name=LNP58_RS09550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09550;old_locus_tag=LNP58_09540;partial=true;pseudo=true;start_range=.,2001303 NZ_CP086372.1 Protein Homology CDS 2001303 2001713 . - 0 ID=cds-LNP58_RS09550;Parent=gene-LNP58_RS09550;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575963.1;locus_tag=LNP58_RS09550;partial=true;product=DUF885 domain-containing protein;pseudo=true;start_range=.,2001303;transl_table=11 NZ_CP086372.1 RefSeq gene 2002067 2002705 . - . ID=gene-LNP58_RS09555;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LNP58_RS09555;old_locus_tag=LNP58_09545 NZ_CP086372.1 Protein Homology CDS 2002067 2002705 . - 0 ID=cds-WP_011409803.1;Parent=gene-LNP58_RS09555;Dbxref=Genbank:WP_011409803.1;Name=WP_011409803.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995473.1;locus_tag=LNP58_RS09555;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_011409803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2002928 2004556 . + . ID=gene-LNP58_RS09560;Name=LNP58_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09560;old_locus_tag=LNP58_09550 NZ_CP086372.1 Protein Homology CDS 2002928 2004556 . + 0 ID=cds-WP_011409802.1;Parent=gene-LNP58_RS09560;Dbxref=Genbank:WP_011409802.1;Name=WP_011409802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901821.1;locus_tag=LNP58_RS09560;product=alkaline phosphatase D family protein;protein_id=WP_011409802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2004733 2006304 . + . ID=gene-LNP58_RS09565;Name=LNP58_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09565;old_locus_tag=LNP58_09555 NZ_CP086372.1 Protein Homology CDS 2004733 2006304 . + 0 ID=cds-WP_069960053.1;Parent=gene-LNP58_RS09565;Dbxref=Genbank:WP_069960053.1;Name=WP_069960053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501577.1;locus_tag=LNP58_RS09565;product=alkaline phosphatase D family protein;protein_id=WP_069960053.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2006323 2006919 . - . ID=gene-LNP58_RS09570;Name=LNP58_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09570;old_locus_tag=LNP58_09560 NZ_CP086372.1 Protein Homology CDS 2006323 2006919 . - 0 ID=cds-WP_014501576.1;Parent=gene-LNP58_RS09570;Dbxref=Genbank:WP_014501576.1;Name=WP_014501576.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575969.1;locus_tag=LNP58_RS09570;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_014501576.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2007046 2007297 . + . ID=gene-LNP58_RS09575;Name=LNP58_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09575;old_locus_tag=LNP58_09565 NZ_CP086372.1 Protein Homology CDS 2007046 2007297 . + 0 ID=cds-WP_011409801.1;Parent=gene-LNP58_RS09575;Dbxref=Genbank:WP_011409801.1;Name=WP_011409801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409801.1;locus_tag=LNP58_RS09575;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011409801.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2007359 2007796 . - . ID=gene-LNP58_RS09580;Name=LNP58_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09580;old_locus_tag=LNP58_09570 NZ_CP086372.1 Protein Homology CDS 2007359 2007796 . - 0 ID=cds-WP_011409800.1;Parent=gene-LNP58_RS09580;Dbxref=Genbank:WP_011409800.1;Name=WP_011409800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409800.1;locus_tag=LNP58_RS09580;product=GFA family protein;protein_id=WP_011409800.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2007793 2008572 . - . ID=gene-LNP58_RS09585;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LNP58_RS09585;old_locus_tag=LNP58_09575 NZ_CP086372.1 Protein Homology CDS 2007793 2008572 . - 0 ID=cds-WP_011409799.1;Parent=gene-LNP58_RS09585;Dbxref=Genbank:WP_011409799.1;Name=WP_011409799.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995484.1;locus_tag=LNP58_RS09585;product=exodeoxyribonuclease III;protein_id=WP_011409799.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2008978 2009627 . + . ID=gene-LNP58_RS09590;Name=LNP58_RS09590;end_range=2009627,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09590;old_locus_tag=LNP58_09580;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2008978 2009627 . + 0 ID=cds-LNP58_RS09590;Parent=gene-LNP58_RS09590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2009627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159738.1;locus_tag=LNP58_RS09590;partial=true;product=ROK family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2009702 2009778 . + . ID=gene-LNP58_RS09595;Name=LNP58_RS09595;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS09595;old_locus_tag=LNP58_09585 NZ_CP086372.1 cmsearch ncRNA 2009702 2009778 . + . ID=rna-LNP58_RS09595;Parent=gene-LNP58_RS09595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09595;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2009702 2009778 . + . ID=exon-LNP58_RS09595-1;Parent=rna-LNP58_RS09595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09595;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2010238 2011965 . - . ID=gene-LNP58_RS09600;Name=LNP58_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09600;old_locus_tag=LNP58_09590 NZ_CP086372.1 Protein Homology CDS 2010238 2011965 . - 0 ID=cds-WP_011260819.1;Parent=gene-LNP58_RS09600;Dbxref=Genbank:WP_011260819.1;Name=WP_011260819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304713.1;locus_tag=LNP58_RS09600;product=cation acetate symporter;protein_id=WP_011260819.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2011962 2012279 . - . ID=gene-LNP58_RS09605;Name=LNP58_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09605;old_locus_tag=LNP58_09595 NZ_CP086372.1 Protein Homology CDS 2011962 2012279 . - 0 ID=cds-WP_011409798.1;Parent=gene-LNP58_RS09605;Dbxref=Genbank:WP_011409798.1;Name=WP_011409798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451668.1;locus_tag=LNP58_RS09605;product=DUF485 domain-containing protein;protein_id=WP_011409798.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2012366 2013756 . - . ID=gene-LNP58_RS09610;Name=LNP58_RS09610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09610;old_locus_tag=LNP58_09600;pseudo=true NZ_CP086372.1 Protein Homology CDS 2012366 2013756 . - 0 ID=cds-LNP58_RS09610;Parent=gene-LNP58_RS09610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575984.1;locus_tag=LNP58_RS09610;product=DcaP family trimeric outer membrane transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2014054 2015997 . + . ID=gene-LNP58_RS09615;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LNP58_RS09615;old_locus_tag=LNP58_09605 NZ_CP086372.1 Protein Homology CDS 2014054 2015997 . + 0 ID=cds-WP_011409795.1;Parent=gene-LNP58_RS09615;Dbxref=Genbank:WP_011409795.1;Name=WP_011409795.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466986.1;locus_tag=LNP58_RS09615;product=acetate--CoA ligase;protein_id=WP_011409795.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2016259 2016927 . + . ID=gene-LNP58_RS09620;Name=LNP58_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09620;old_locus_tag=LNP58_09610 NZ_CP086372.1 Protein Homology CDS 2016259 2016927 . + 0 ID=cds-WP_011409794.1;Parent=gene-LNP58_RS09620;Dbxref=Genbank:WP_011409794.1;Name=WP_011409794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156036.1;locus_tag=LNP58_RS09620;product=response regulator transcription factor;protein_id=WP_011409794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2017331 2017406 . + . ID=gene-LNP58_RS09625;Name=LNP58_RS09625;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS09625;old_locus_tag=LNP58_09615 NZ_CP086372.1 cmsearch ncRNA 2017331 2017406 . + . ID=rna-LNP58_RS09625;Parent=gene-LNP58_RS09625;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09625;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2017331 2017406 . + . ID=exon-LNP58_RS09625-1;Parent=rna-LNP58_RS09625;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS09625;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2017400 2017900 . - . ID=gene-LNP58_RS09630;Name=LNP58_RS09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09630;old_locus_tag=LNP58_09620;partial=true;pseudo=true;start_range=.,2017400 NZ_CP086372.1 Protein Homology CDS 2017400 2017900 . - 0 ID=cds-LNP58_RS09630;Parent=gene-LNP58_RS09630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914582.1;locus_tag=LNP58_RS09630;partial=true;product=DUF4424 family protein;pseudo=true;start_range=.,2017400;transl_table=11 NZ_CP086372.1 RefSeq gene 2017843 2018046 . + . ID=gene-LNP58_RS09635;Name=LNP58_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09635;old_locus_tag=LNP58_09625 NZ_CP086372.1 Protein Homology CDS 2017843 2018046 . + 0 ID=cds-WP_012446420.1;Parent=gene-LNP58_RS09635;Dbxref=Genbank:WP_012446420.1;Name=WP_012446420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849177.1;locus_tag=LNP58_RS09635;product=hypothetical protein;protein_id=WP_012446420.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2018363 2019277 . - . ID=gene-LNP58_RS09640;Name=LNP58_RS09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09640;old_locus_tag=LNP58_09630;partial=true;pseudo=true;start_range=.,2018363 NZ_CP086372.1 Protein Homology CDS 2018363 2019277 . - 0 ID=cds-LNP58_RS09640;Parent=gene-LNP58_RS09640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914579.1;locus_tag=LNP58_RS09640;partial=true;product=family 43 glycosylhydrolase;pseudo=true;start_range=.,2018363;transl_table=11 NZ_CP086372.1 RefSeq gene 2019311 2019478 . - . ID=gene-LNP58_RS09645;Name=LNP58_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09645;old_locus_tag=LNP58_09635 NZ_CP086372.1 Protein Homology CDS 2019311 2019478 . - 0 ID=cds-WP_012446418.1;Parent=gene-LNP58_RS09645;Dbxref=Genbank:WP_012446418.1;Name=WP_012446418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575998.1;locus_tag=LNP58_RS09645;product=hypothetical protein;protein_id=WP_012446418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2019399 2019593 . + . ID=gene-LNP58_RS09650;Name=LNP58_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09650;old_locus_tag=LNP58_09640 NZ_CP086372.1 Protein Homology CDS 2019399 2019593 . + 0 ID=cds-WP_228383577.1;Parent=gene-LNP58_RS09650;Dbxref=Genbank:WP_228383577.1;Name=WP_228383577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158476.1;locus_tag=LNP58_RS09650;product=hypothetical protein;protein_id=WP_228383577.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2019590 2020600 . + . ID=gene-LNP58_RS09655;Name=LNP58_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09655;old_locus_tag=LNP58_09645 NZ_CP086372.1 Protein Homology CDS 2019590 2020600 . + 0 ID=cds-WP_011409792.1;Parent=gene-LNP58_RS09655;Dbxref=Genbank:WP_011409792.1;Name=WP_011409792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349045.1;locus_tag=LNP58_RS09655;product=aldo/keto reductase;protein_id=WP_011409792.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2020597 2021469 . + . ID=gene-LNP58_RS09660;Name=LNP58_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09660;old_locus_tag=LNP58_09650 NZ_CP086372.1 Protein Homology CDS 2020597 2021469 . + 0 ID=cds-WP_011260810.1;Parent=gene-LNP58_RS09660;Dbxref=Genbank:WP_011260810.1;Name=WP_011260810.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930619.1;locus_tag=LNP58_RS09660;product=amidohydrolase family protein;protein_id=WP_011260810.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2021466 2022236 . + . ID=gene-LNP58_RS09665;Name=LNP58_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09665;old_locus_tag=LNP58_09655 NZ_CP086372.1 Protein Homology CDS 2021466 2022236 . + 0 ID=cds-WP_011260809.1;Parent=gene-LNP58_RS09665;Dbxref=Genbank:WP_011260809.1;Name=WP_011260809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439611.1;locus_tag=LNP58_RS09665;product=SDR family oxidoreductase;protein_id=WP_011260809.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2022407 2023264 . + . ID=gene-LNP58_RS09670;Name=LNP58_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09670;old_locus_tag=LNP58_09660 NZ_CP086372.1 Protein Homology CDS 2022407 2023264 . + 0 ID=cds-WP_011260808.1;Parent=gene-LNP58_RS09670;Dbxref=Genbank:WP_011260808.1;Name=WP_011260808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966483.1;locus_tag=LNP58_RS09670;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011260808.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2023788 2025107 . + . ID=gene-LNP58_RS09675;Name=LNP58_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09675;old_locus_tag=LNP58_09665 NZ_CP086372.1 Protein Homology CDS 2023788 2025107 . + 0 ID=cds-WP_059317512.1;Parent=gene-LNP58_RS09675;Dbxref=Genbank:WP_059317512.1;Name=WP_059317512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374394.1;locus_tag=LNP58_RS09675;product=L-fuconate dehydratase;protein_id=WP_059317512.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2025420 2025893 . + . ID=gene-LNP58_RS09680;Name=LNP58_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09680;old_locus_tag=LNP58_09670 NZ_CP086372.1 Protein Homology CDS 2025420 2025893 . + 0 ID=cds-WP_011260806.1;Parent=gene-LNP58_RS09680;Dbxref=Genbank:WP_011260806.1;Name=WP_011260806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505316.1;locus_tag=LNP58_RS09680;product=DUF1456 family protein;protein_id=WP_011260806.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2026582 2029083 . + . ID=gene-LNP58_RS09685;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=LNP58_RS09685;old_locus_tag=LNP58_09675 NZ_CP086372.1 Protein Homology CDS 2026582 2029083 . + 0 ID=cds-WP_069965044.1;Parent=gene-LNP58_RS09685;Dbxref=Genbank:WP_069965044.1;Name=WP_069965044.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050223.1;locus_tag=LNP58_RS09685;product=ATP-dependent helicase HrpB;protein_id=WP_069965044.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2029363 2029803 . + . ID=gene-LNP58_RS09690;Name=LNP58_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09690;old_locus_tag=LNP58_09680 NZ_CP086372.1 Protein Homology CDS 2029363 2029803 . + 0 ID=cds-WP_059317510.1;Parent=gene-LNP58_RS09690;Dbxref=Genbank:WP_059317510.1;Name=WP_059317510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160523.1;locus_tag=LNP58_RS09690;product=hypothetical protein;protein_id=WP_059317510.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2030126 2030698 . - . ID=gene-LNP58_RS09695;Name=LNP58_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09695;old_locus_tag=LNP58_09685 NZ_CP086372.1 Protein Homology CDS 2030126 2030698 . - 0 ID=cds-WP_113085531.1;Parent=gene-LNP58_RS09695;Dbxref=Genbank:WP_113085531.1;Name=WP_113085531.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156080.1;locus_tag=LNP58_RS09695;product=pseudouridine synthase;protein_id=WP_113085531.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2030791 2031645 . - . ID=gene-LNP58_RS09700;Name=LNP58_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09700;old_locus_tag=LNP58_09690 NZ_CP086372.1 Protein Homology CDS 2030791 2031645 . - 0 ID=cds-WP_011409786.1;Parent=gene-LNP58_RS09700;Dbxref=Genbank:WP_011409786.1;Name=WP_011409786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912328.1;locus_tag=LNP58_RS09700;product=class I SAM-dependent methyltransferase;protein_id=WP_011409786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2031878 2032849 . + . ID=gene-LNP58_RS09705;Name=LNP58_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09705;old_locus_tag=LNP58_09695 NZ_CP086372.1 Protein Homology CDS 2031878 2032849 . + 0 ID=cds-WP_011260801.1;Parent=gene-LNP58_RS09705;Dbxref=Genbank:WP_011260801.1;Name=WP_011260801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379903.1;locus_tag=LNP58_RS09705;product=aldo/keto reductase;protein_id=WP_011260801.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2032988 2034016 . + . ID=gene-LNP58_RS09710;Name=LNP58_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09710;old_locus_tag=LNP58_09700 NZ_CP086372.1 Protein Homology CDS 2032988 2034016 . + 0 ID=cds-WP_011260800.1;Parent=gene-LNP58_RS09710;Dbxref=Genbank:WP_011260800.1;Name=WP_011260800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345999.1;locus_tag=LNP58_RS09710;product=NADP-dependent oxidoreductase;protein_id=WP_011260800.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2034078 2034881 . + . ID=gene-LNP58_RS09715;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LNP58_RS09715;old_locus_tag=LNP58_09705 NZ_CP086372.1 Protein Homology CDS 2034078 2034881 . + 0 ID=cds-WP_011260799.1;Parent=gene-LNP58_RS09715;Dbxref=Genbank:WP_011260799.1;Name=WP_011260799.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260799.1;locus_tag=LNP58_RS09715;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_011260799.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2035027 2035329 . + . ID=gene-LNP58_RS09720;Name=LNP58_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09720;old_locus_tag=LNP58_09710 NZ_CP086372.1 Protein Homology CDS 2035027 2035329 . + 0 ID=cds-WP_011409784.1;Parent=gene-LNP58_RS09720;Dbxref=Genbank:WP_011409784.1;Name=WP_011409784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505307.1;locus_tag=LNP58_RS09720;product=hypothetical protein;protein_id=WP_011409784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2035363 2035509 . + . ID=gene-LNP58_RS09725;Name=LNP58_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09725;old_locus_tag=LNP58_09715 NZ_CP086372.1 GeneMarkS-2+ CDS 2035363 2035509 . + 0 ID=cds-WP_012446412.1;Parent=gene-LNP58_RS09725;Dbxref=Genbank:WP_012446412.1;Name=WP_012446412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09725;product=hypothetical protein;protein_id=WP_012446412.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2035496 2035939 . - . ID=gene-LNP58_RS09730;Name=LNP58_RS09730;end_range=2035939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09730;old_locus_tag=LNP58_09720;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2035496 2035939 . - 0 ID=cds-LNP58_RS09730;Parent=gene-LNP58_RS09730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2035939,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS09730;partial=true;product=IS5-like element ISXo3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2036070 2037112 . + . ID=gene-LNP58_RS09735;Name=LNP58_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09735;old_locus_tag=LNP58_09725 NZ_CP086372.1 Protein Homology CDS 2036070 2036265 . + 0 ID=cds-WP_229001942.1;Parent=gene-LNP58_RS09735;Dbxref=Genbank:WP_229001942.1;Name=WP_229001942.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS09735;product=IS3 family transposase;protein_id=WP_229001942.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2036265 2037112 . + 2 ID=cds-WP_229001942.1;Parent=gene-LNP58_RS09735;Dbxref=Genbank:WP_229001942.1;Name=WP_229001942.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS09735;product=IS3 family transposase;protein_id=WP_229001942.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2037660 2038628 . + . ID=gene-LNP58_RS09740;Name=LNP58_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09740;old_locus_tag=LNP58_09730 NZ_CP086372.1 Protein Homology CDS 2037660 2038628 . + 0 ID=cds-WP_011258802.1-8;Parent=gene-LNP58_RS09740;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS09740;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2038777 2039244 . + . ID=gene-LNP58_RS09745;Name=xopG;gbkey=Gene;gene=xopG;gene_biotype=protein_coding;locus_tag=LNP58_RS09745;old_locus_tag=LNP58_09735 NZ_CP086372.1 Protein Homology CDS 2038777 2039244 . + 0 ID=cds-WP_011409781.1;Parent=gene-LNP58_RS09745;Dbxref=Genbank:WP_011409781.1;Name=WP_011409781.1;Ontology_term=GO:0030254;gbkey=CDS;gene=xopG;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:NF041347.1;locus_tag=LNP58_RS09745;product=type III secretion system effector protein XopG;protein_id=WP_011409781.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2039477 2040442 . - . ID=gene-LNP58_RS09750;Name=LNP58_RS09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09750;old_locus_tag=LNP58_09740;pseudo=true NZ_CP086372.1 Protein Homology CDS 2039477 2040442 . - 0 ID=cds-LNP58_RS09750;Parent=gene-LNP58_RS09750;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS09750;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2041121 2042158 . - . ID=gene-LNP58_RS09755;Name=LNP58_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09755;old_locus_tag=LNP58_09745 NZ_CP086372.1 Protein Homology CDS 2041121 2042158 . - 0 ID=cds-WP_011409779.1;Parent=gene-LNP58_RS09755;Dbxref=Genbank:WP_011409779.1;Name=WP_011409779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409779.1;locus_tag=LNP58_RS09755;product=patatin-like phospholipase family protein;protein_id=WP_011409779.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2042666 2043663 . - . ID=gene-LNP58_RS09760;Name=LNP58_RS09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09760;old_locus_tag=LNP58_09750;pseudo=true NZ_CP086372.1 Protein Homology CDS 2042666 2043663 . - 0 ID=cds-LNP58_RS09760;Parent=gene-LNP58_RS09760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912141.1;locus_tag=LNP58_RS09760;product=TIGR00266 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2043852 2044697 . - . ID=gene-LNP58_RS09765;Name=LNP58_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09765;old_locus_tag=LNP58_09755 NZ_CP086372.1 Protein Homology CDS 2043852 2044697 . - 0 ID=cds-WP_011409777.1;Parent=gene-LNP58_RS09765;Dbxref=Genbank:WP_011409777.1;Name=WP_011409777.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159607.1;locus_tag=LNP58_RS09765;product=ATP-binding cassette domain-containing protein;protein_id=WP_011409777.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2044857 2046062 . + . ID=gene-LNP58_RS09770;Name=LNP58_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09770;old_locus_tag=LNP58_09760 NZ_CP086372.1 Protein Homology CDS 2044857 2046062 . + 0 ID=cds-WP_011260788.1;Parent=gene-LNP58_RS09770;Dbxref=Genbank:WP_011260788.1;Name=WP_011260788.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379811.1;locus_tag=LNP58_RS09770;product=fatty acid desaturase;protein_id=WP_011260788.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2046115 2046447 . + . ID=gene-LNP58_RS09775;Name=LNP58_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09775;old_locus_tag=LNP58_09765 NZ_CP086372.1 Protein Homology CDS 2046115 2046447 . + 0 ID=cds-WP_011409775.1;Parent=gene-LNP58_RS09775;Dbxref=Genbank:WP_011409775.1;Name=WP_011409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901217.1;locus_tag=LNP58_RS09775;product=EF-hand domain-containing protein;protein_id=WP_011409775.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2046496 2047233 . + . ID=gene-LNP58_RS09780;Name=LNP58_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09780;old_locus_tag=LNP58_09770 NZ_CP086372.1 Protein Homology CDS 2046496 2047233 . + 0 ID=cds-WP_011409774.1;Parent=gene-LNP58_RS09780;Dbxref=Genbank:WP_011409774.1;Name=WP_011409774.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992662.1;locus_tag=LNP58_RS09780;product=ATP-binding cassette domain-containing protein;protein_id=WP_011409774.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2047230 2048702 . + . ID=gene-LNP58_RS09785;Name=LNP58_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09785;old_locus_tag=LNP58_09775 NZ_CP086372.1 Protein Homology CDS 2047230 2048702 . + 0 ID=cds-WP_042465359.1;Parent=gene-LNP58_RS09785;Dbxref=Genbank:WP_042465359.1;Name=WP_042465359.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370723.1;locus_tag=LNP58_RS09785;product=ABC transporter permease subunit;protein_id=WP_042465359.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2048989 2050170 . - . ID=gene-LNP58_RS09790;Name=LNP58_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09790;old_locus_tag=LNP58_09780 NZ_CP086372.1 Protein Homology CDS 2048989 2050170 . - 0 ID=cds-WP_011260784.1;Parent=gene-LNP58_RS09790;Dbxref=Genbank:WP_011260784.1;Name=WP_011260784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501482.1;locus_tag=LNP58_RS09790;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_011260784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2050242 2051525 . + . ID=gene-LNP58_RS09795;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=LNP58_RS09795;old_locus_tag=LNP58_09785 NZ_CP086372.1 Protein Homology CDS 2050242 2051525 . + 0 ID=cds-WP_011409772.1;Parent=gene-LNP58_RS09795;Dbxref=Genbank:WP_011409772.1;Name=WP_011409772.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050153.1;locus_tag=LNP58_RS09795;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_011409772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2051522 2052508 . + . ID=gene-LNP58_RS09800;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=LNP58_RS09800;old_locus_tag=LNP58_09790 NZ_CP086372.1 Protein Homology CDS 2051522 2052508 . + 0 ID=cds-WP_011260782.1;Parent=gene-LNP58_RS09800;Dbxref=Genbank:WP_011260782.1;Name=WP_011260782.1;Ontology_term=GO:0052699,GO:0030745;gbkey=CDS;gene=egtD;go_function=dimethylhistidine N-methyltransferase activity|0030745||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157360.1;locus_tag=LNP58_RS09800;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_011260782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2052553 2053830 . - . ID=gene-LNP58_RS09805;Name=LNP58_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09805;old_locus_tag=LNP58_09795 NZ_CP086372.1 Protein Homology CDS 2052553 2053830 . - 0 ID=cds-WP_011260781.1;Parent=gene-LNP58_RS09805;Dbxref=Genbank:WP_011260781.1;Name=WP_011260781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501485.1;locus_tag=LNP58_RS09805;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_011260781.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2053827 2054447 . - . ID=gene-LNP58_RS09810;Name=LNP58_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09810;old_locus_tag=LNP58_09800 NZ_CP086372.1 Protein Homology CDS 2053827 2054447 . - 0 ID=cds-WP_011260780.1;Parent=gene-LNP58_RS09810;Dbxref=Genbank:WP_011260780.1;Name=WP_011260780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260780.1;locus_tag=LNP58_RS09810;product=helix-turn-helix transcriptional regulator;protein_id=WP_011260780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2054590 2058297 . - . ID=gene-LNP58_RS09815;Name=LNP58_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09815;old_locus_tag=LNP58_09805 NZ_CP086372.1 Protein Homology CDS 2054590 2058297 . - 0 ID=cds-WP_011260779.1;Parent=gene-LNP58_RS09815;Dbxref=Genbank:WP_011260779.1;Name=WP_011260779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488440.1;locus_tag=LNP58_RS09815;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_011260779.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2058492 2059127 . + . ID=gene-LNP58_RS09820;Name=LNP58_RS09820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09820;old_locus_tag=LNP58_09810;pseudo=true NZ_CP086372.1 Protein Homology CDS 2058492 2059127 . + 0 ID=cds-LNP58_RS09820;Parent=gene-LNP58_RS09820;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571529.1;locus_tag=LNP58_RS09820;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2059389 2060306 . + . ID=gene-LNP58_RS09825;Name=LNP58_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09825;old_locus_tag=LNP58_09815 NZ_CP086372.1 Protein Homology CDS 2059389 2060306 . + 0 ID=cds-WP_011260776.1;Parent=gene-LNP58_RS09825;Dbxref=Genbank:WP_011260776.1;Name=WP_011260776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088991.1;locus_tag=LNP58_RS09825;product=AEC family transporter;protein_id=WP_011260776.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2060659 2061291 . + . ID=gene-LNP58_RS09830;Name=LNP58_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09830;old_locus_tag=LNP58_09820 NZ_CP086372.1 Protein Homology CDS 2060659 2061291 . + 0 ID=cds-WP_011409768.1;Parent=gene-LNP58_RS09830;Dbxref=Genbank:WP_011409768.1;Name=WP_011409768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159611.1;locus_tag=LNP58_RS09830;product=ParA family protein;protein_id=WP_011409768.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2061307 2061783 . + . ID=gene-LNP58_RS09835;Name=LNP58_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09835;old_locus_tag=LNP58_09825 NZ_CP086372.1 Protein Homology CDS 2061307 2061783 . + 0 ID=cds-WP_011409767.1;Parent=gene-LNP58_RS09835;Dbxref=Genbank:WP_011409767.1;Name=WP_011409767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1;locus_tag=LNP58_RS09835;product=histidine phosphatase family protein;protein_id=WP_011409767.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2061787 2062359 . + . ID=gene-LNP58_RS09840;Name=LNP58_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09840;old_locus_tag=LNP58_09830 NZ_CP086372.1 Protein Homology CDS 2061787 2062359 . + 0 ID=cds-WP_011260773.1;Parent=gene-LNP58_RS09840;Dbxref=Genbank:WP_011260773.1;Name=WP_011260773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488454.1;locus_tag=LNP58_RS09840;product=YceI family protein;protein_id=WP_011260773.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2062356 2064371 . + . ID=gene-LNP58_RS09845;Name=LNP58_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09845;old_locus_tag=LNP58_09835 NZ_CP086372.1 Protein Homology CDS 2062356 2064371 . + 0 ID=cds-WP_011260772.1;Parent=gene-LNP58_RS09845;Dbxref=Genbank:WP_011260772.1;Name=WP_011260772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921165.1;locus_tag=LNP58_RS09845;product=phospholipase D family protein;protein_id=WP_011260772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2064663 2065091 . + . ID=gene-LNP58_RS09850;Name=LNP58_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09850;old_locus_tag=LNP58_09840 NZ_CP086372.1 Protein Homology CDS 2064663 2065091 . + 0 ID=cds-WP_011260771.1;Parent=gene-LNP58_RS09850;Dbxref=Genbank:WP_011260771.1;Name=WP_011260771.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157352.1;locus_tag=LNP58_RS09850;product=hotdog fold thioesterase;protein_id=WP_011260771.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2065211 2066014 . + . ID=gene-LNP58_RS09855;Name=LNP58_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09855;old_locus_tag=LNP58_09845 NZ_CP086372.1 Protein Homology CDS 2065211 2066014 . + 0 ID=cds-WP_011409766.1;Parent=gene-LNP58_RS09855;Dbxref=Genbank:WP_011409766.1;Name=WP_011409766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912162.1;locus_tag=LNP58_RS09855;product=lysophospholipid acyltransferase family protein;protein_id=WP_011409766.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2066074 2067063 . + . ID=gene-LNP58_RS09860;Name=LNP58_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09860;old_locus_tag=LNP58_09850 NZ_CP086372.1 Protein Homology CDS 2066074 2067063 . + 0 ID=cds-WP_011260769.1;Parent=gene-LNP58_RS09860;Dbxref=Genbank:WP_011260769.1;Name=WP_011260769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300655.1;locus_tag=LNP58_RS09860;product=alpha/beta fold hydrolase;protein_id=WP_011260769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2067477 2069549 . + . ID=gene-LNP58_RS09865;Name=LNP58_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09865;old_locus_tag=LNP58_09855 NZ_CP086372.1 Protein Homology CDS 2067477 2069549 . + 0 ID=cds-WP_011409765.1;Parent=gene-LNP58_RS09865;Dbxref=Genbank:WP_011409765.1;Name=WP_011409765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237114.1;locus_tag=LNP58_RS09865;product=tetratricopeptide repeat protein;protein_id=WP_011409765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2069744 2070355 . + . ID=gene-LNP58_RS09870;Name=LNP58_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09870;old_locus_tag=LNP58_09860 NZ_CP086372.1 Protein Homology CDS 2069744 2070355 . + 0 ID=cds-WP_011409764.1;Parent=gene-LNP58_RS09870;Dbxref=Genbank:WP_011409764.1;Name=WP_011409764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157349.1;locus_tag=LNP58_RS09870;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_011409764.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2070439 2071444 . + . ID=gene-LNP58_RS09875;Name=LNP58_RS09875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09875;old_locus_tag=LNP58_09865;pseudo=true NZ_CP086372.1 Protein Homology CDS 2070439 2071444 . + 0 ID=cds-LNP58_RS09875;Parent=gene-LNP58_RS09875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157348.1;locus_tag=LNP58_RS09875;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2071509 2072315 . - . ID=gene-LNP58_RS09880;Name=LNP58_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09880;old_locus_tag=LNP58_09870 NZ_CP086372.1 Protein Homology CDS 2071509 2072315 . - 0 ID=cds-WP_011260766.1;Parent=gene-LNP58_RS09880;Dbxref=Genbank:WP_011260766.1;Name=WP_011260766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930695.1;locus_tag=LNP58_RS09880;product=META domain-containing protein;protein_id=WP_011260766.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2072452 2073249 . - . ID=gene-LNP58_RS09885;Name=LNP58_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09885;old_locus_tag=LNP58_09875 NZ_CP086372.1 Protein Homology CDS 2072452 2073249 . - 0 ID=cds-WP_011260765.1;Parent=gene-LNP58_RS09885;Dbxref=Genbank:WP_011260765.1;Name=WP_011260765.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300661.1;locus_tag=LNP58_RS09885;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_011260765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2073471 2074880 . + . ID=gene-LNP58_RS09890;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LNP58_RS09890;old_locus_tag=LNP58_09880 NZ_CP086372.1 Protein Homology CDS 2073471 2074880 . + 0 ID=cds-WP_011260764.1;Parent=gene-LNP58_RS09890;Dbxref=Genbank:WP_011260764.1;Name=WP_011260764.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=LNP58_RS09890;product=type I glutamate--ammonia ligase;protein_id=WP_011260764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2075158 2075496 . + . ID=gene-LNP58_RS09895;Name=LNP58_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09895;old_locus_tag=LNP58_09885 NZ_CP086372.1 Protein Homology CDS 2075158 2075496 . + 0 ID=cds-WP_011260763.1;Parent=gene-LNP58_RS09895;Dbxref=Genbank:WP_011260763.1;Name=WP_011260763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654695.1;locus_tag=LNP58_RS09895;product=P-II family nitrogen regulator;protein_id=WP_011260763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2075519 2076961 . + . ID=gene-LNP58_RS09900;Name=LNP58_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09900;old_locus_tag=LNP58_09890 NZ_CP086372.1 Protein Homology CDS 2075519 2076961 . + 0 ID=cds-WP_075242198.1;Parent=gene-LNP58_RS09900;Dbxref=Genbank:WP_075242198.1;Name=WP_075242198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237112.1;locus_tag=LNP58_RS09900;product=ammonium transporter;protein_id=WP_075242198.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2077232 2078287 . + . ID=gene-LNP58_RS09905;Name=LNP58_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09905;old_locus_tag=LNP58_09895 NZ_CP086372.1 Protein Homology CDS 2077232 2078287 . + 0 ID=cds-WP_011260761.1;Parent=gene-LNP58_RS09905;Dbxref=Genbank:WP_011260761.1;Name=WP_011260761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850649.1;locus_tag=LNP58_RS09905;product=ATP-binding protein;protein_id=WP_011260761.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2078280 2079707 . + . ID=gene-LNP58_RS09910;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=LNP58_RS09910;old_locus_tag=LNP58_09900 NZ_CP086372.1 Protein Homology CDS 2078280 2079707 . + 0 ID=cds-WP_011409760.1;Parent=gene-LNP58_RS09910;Dbxref=Genbank:WP_011409760.1;Name=WP_011409760.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921161.1;locus_tag=LNP58_RS09910;product=nitrogen regulation protein NR(I);protein_id=WP_011409760.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2080206 2080808 . + . ID=gene-LNP58_RS09915;Name=LNP58_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09915;old_locus_tag=LNP58_09905 NZ_CP086372.1 Protein Homology CDS 2080206 2080808 . + 0 ID=cds-WP_012443745.1;Parent=gene-LNP58_RS09915;Dbxref=Genbank:WP_012443745.1;Name=WP_012443745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165149.1;locus_tag=LNP58_RS09915;product=superoxide dismutase family protein;protein_id=WP_012443745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2080879 2081511 . + . ID=gene-LNP58_RS09920;Name=LNP58_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09920;old_locus_tag=LNP58_09910 NZ_CP086372.1 Protein Homology CDS 2080879 2081511 . + 0 ID=cds-WP_027704180.1;Parent=gene-LNP58_RS09920;Dbxref=Genbank:WP_027704180.1;Name=WP_027704180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903406.1;locus_tag=LNP58_RS09920;product=superoxide dismutase family protein;protein_id=WP_027704180.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2081506 2081787 . - . ID=gene-LNP58_RS09925;Name=LNP58_RS09925;end_range=2081787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09925;old_locus_tag=LNP58_09915;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2081506 2081787 . - 0 ID=cds-LNP58_RS09925;Parent=gene-LNP58_RS09925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2081787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=LNP58_RS09925;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2081794 2082759 . - . ID=gene-LNP58_RS09930;Name=LNP58_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09930;old_locus_tag=LNP58_09920 NZ_CP086372.1 Protein Homology CDS 2081794 2082759 . - 0 ID=cds-WP_109182045.1;Parent=gene-LNP58_RS09930;Dbxref=Genbank:WP_109182045.1;Name=WP_109182045.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS09930;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182045.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2082847 2083383 . - . ID=gene-LNP58_RS09935;Name=LNP58_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09935;old_locus_tag=LNP58_09925 NZ_CP086372.1 Protein Homology CDS 2082847 2083383 . - 0 ID=cds-WP_011260755.1;Parent=gene-LNP58_RS09935;Dbxref=Genbank:WP_011260755.1;Name=WP_011260755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156018.1;locus_tag=LNP58_RS09935;product=tail fiber protein;protein_id=WP_011260755.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2083442 2083969 . - . ID=gene-LNP58_RS09940;Name=LNP58_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09940;old_locus_tag=LNP58_09930 NZ_CP086372.1 Protein Homology CDS 2083442 2083969 . - 0 ID=cds-WP_011260754.1;Parent=gene-LNP58_RS09940;Dbxref=Genbank:WP_011260754.1;Name=WP_011260754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341084.1;locus_tag=LNP58_RS09940;product=tail fiber protein;protein_id=WP_011260754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2084038 2084583 . - . ID=gene-LNP58_RS09945;Name=LNP58_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09945;old_locus_tag=LNP58_09935 NZ_CP086372.1 Protein Homology CDS 2084038 2084583 . - 0 ID=cds-WP_011409756.1;Parent=gene-LNP58_RS09945;Dbxref=Genbank:WP_011409756.1;Name=WP_011409756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364925.1;locus_tag=LNP58_RS09945;product=tail fiber protein;protein_id=WP_011409756.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2084875 2088906 . + . ID=gene-LNP58_RS09950;Name=LNP58_RS09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS09950;old_locus_tag=LNP58_09940;pseudo=true NZ_CP086372.1 Protein Homology CDS 2084875 2088906 . + 0 ID=cds-LNP58_RS09950;Parent=gene-LNP58_RS09950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156020.1;locus_tag=LNP58_RS09950;product=putative Ig domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2089287 2090522 . + . ID=gene-LNP58_RS09955;Name=LNP58_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09955;old_locus_tag=LNP58_09945 NZ_CP086372.1 Protein Homology CDS 2089287 2090522 . + 0 ID=cds-WP_069959761.1-4;Parent=gene-LNP58_RS09955;Dbxref=Genbank:WP_069959761.1;Name=WP_069959761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS09955;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_069959761.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2090643 2091734 . - . ID=gene-LNP58_RS09960;Name=LNP58_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09960;old_locus_tag=LNP58_09950 NZ_CP086372.1 GeneMarkS-2+ CDS 2090643 2091734 . - 0 ID=cds-WP_011409754.1;Parent=gene-LNP58_RS09960;Dbxref=Genbank:WP_011409754.1;Name=WP_011409754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09960;product=hypothetical protein;protein_id=WP_011409754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2091686 2092411 . - . ID=gene-LNP58_RS09965;Name=LNP58_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09965;old_locus_tag=LNP58_09955 NZ_CP086372.1 GeneMarkS-2+ CDS 2091686 2092411 . - 0 ID=cds-WP_011409753.1;Parent=gene-LNP58_RS09965;Dbxref=Genbank:WP_011409753.1;Name=WP_011409753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09965;product=hypothetical protein;protein_id=WP_011409753.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2092479 2092769 . - . ID=gene-LNP58_RS09970;Name=LNP58_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09970;old_locus_tag=LNP58_09960 NZ_CP086372.1 GeneMarkS-2+ CDS 2092479 2092769 . - 0 ID=cds-WP_125168771.1;Parent=gene-LNP58_RS09970;Dbxref=Genbank:WP_125168771.1;Name=WP_125168771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS09970;product=hypothetical protein;protein_id=WP_125168771.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2092817 2096230 . + . ID=gene-LNP58_RS09975;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LNP58_RS09975;old_locus_tag=LNP58_09965 NZ_CP086372.1 Protein Homology CDS 2092817 2096230 . + 0 ID=cds-WP_044756261.1;Parent=gene-LNP58_RS09975;Dbxref=Genbank:WP_044756261.1;Name=WP_044756261.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164976.1;locus_tag=LNP58_RS09975;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_044756261.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2096227 2100300 . + . ID=gene-LNP58_RS09980;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LNP58_RS09980;old_locus_tag=LNP58_09970 NZ_CP086372.1 Protein Homology CDS 2096227 2100300 . + 0 ID=cds-WP_044756262.1;Parent=gene-LNP58_RS09980;Dbxref=Genbank:WP_044756262.1;Name=WP_044756262.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171629.1;locus_tag=LNP58_RS09980;product=exodeoxyribonuclease V subunit beta;protein_id=WP_044756262.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2100488 2102740 . + . ID=gene-LNP58_RS09985;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LNP58_RS09985;old_locus_tag=LNP58_09975 NZ_CP086372.1 Protein Homology CDS 2100488 2102740 . + 0 ID=cds-WP_069960050.1;Parent=gene-LNP58_RS09985;Dbxref=Genbank:WP_069960050.1;Name=WP_069960050.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159993.1;locus_tag=LNP58_RS09985;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_069960050.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2102835 2103116 . + . ID=gene-LNP58_RS09990;Name=LNP58_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09990;old_locus_tag=LNP58_09980 NZ_CP086372.1 Protein Homology CDS 2102835 2103116 . + 0 ID=cds-WP_012443754.1;Parent=gene-LNP58_RS09990;Dbxref=Genbank:WP_012443754.1;Name=WP_012443754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=LNP58_RS09990;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012443754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2103134 2103424 . + . ID=gene-LNP58_RS09995;Name=LNP58_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS09995;old_locus_tag=LNP58_09985 NZ_CP086372.1 Protein Homology CDS 2103134 2103424 . + 0 ID=cds-WP_011260746.1;Parent=gene-LNP58_RS09995;Dbxref=Genbank:WP_011260746.1;Name=WP_011260746.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156025.1;locus_tag=LNP58_RS09995;product=HigA family addiction module antitoxin;protein_id=WP_011260746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2104353 2105747 . + . ID=gene-LNP58_RS10000;Name=LNP58_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10000;old_locus_tag=LNP58_09990 NZ_CP086372.1 Protein Homology CDS 2104353 2105747 . + 0 ID=cds-WP_027703652.1;Parent=gene-LNP58_RS10000;Dbxref=Genbank:WP_027703652.1;Name=WP_027703652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159992.1;locus_tag=LNP58_RS10000;product=nucleoside hydrolase;protein_id=WP_027703652.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2105850 2106037 . - . ID=gene-LNP58_RS10005;Name=LNP58_RS10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10005;old_locus_tag=LNP58_09995;pseudo=true NZ_CP086372.1 Protein Homology CDS 2105850 2106037 . - 0 ID=cds-LNP58_RS10005;Parent=gene-LNP58_RS10005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482327.1;locus_tag=LNP58_RS10005;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2106197 2106529 . - . ID=gene-LNP58_RS10010;Name=LNP58_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10010;old_locus_tag=LNP58_10000 NZ_CP086372.1 Protein Homology CDS 2106197 2106529 . - 0 ID=cds-WP_011260743.1;Parent=gene-LNP58_RS10010;Dbxref=Genbank:WP_011260743.1;Name=WP_011260743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302538.1;locus_tag=LNP58_RS10010;product=hypothetical protein;protein_id=WP_011260743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2106784 2107110 . + . ID=gene-LNP58_RS10015;Name=LNP58_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10015;old_locus_tag=LNP58_10005 NZ_CP086372.1 Protein Homology CDS 2106784 2107110 . + 0 ID=cds-WP_228329596.1;Parent=gene-LNP58_RS10015;Dbxref=Genbank:WP_228329596.1;Name=WP_228329596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112541.1;locus_tag=LNP58_RS10015;product=hypothetical protein;protein_id=WP_228329596.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2107238 2107660 . + . ID=gene-LNP58_RS10020;Name=LNP58_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10020;old_locus_tag=LNP58_10010 NZ_CP086372.1 Protein Homology CDS 2107238 2107660 . + 0 ID=cds-WP_042465811.1;Parent=gene-LNP58_RS10020;Dbxref=Genbank:WP_042465811.1;Name=WP_042465811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304496.1;locus_tag=LNP58_RS10020;product=PAAR domain-containing protein;protein_id=WP_042465811.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2107663 2108271 . + . ID=gene-LNP58_RS10025;Name=LNP58_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10025;old_locus_tag=LNP58_10015 NZ_CP086372.1 Protein Homology CDS 2107663 2108271 . + 0 ID=cds-WP_011409746.1;Parent=gene-LNP58_RS10025;Dbxref=Genbank:WP_011409746.1;Name=WP_011409746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.2;locus_tag=LNP58_RS10025;product=DUF4123 domain-containing protein;protein_id=WP_011409746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2108306 2108464 . + . ID=gene-LNP58_RS10030;Name=LNP58_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10030;old_locus_tag=LNP58_10020 NZ_CP086372.1 GeneMarkS-2+ CDS 2108306 2108464 . + 0 ID=cds-WP_228329595.1;Parent=gene-LNP58_RS10030;Dbxref=Genbank:WP_228329595.1;Name=WP_228329595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS10030;product=hypothetical protein;protein_id=WP_228329595.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2108473 2109258 . + . ID=gene-LNP58_RS10035;Name=LNP58_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10035;old_locus_tag=LNP58_10025 NZ_CP086372.1 Protein Homology CDS 2108473 2109258 . + 0 ID=cds-WP_011409744.1;Parent=gene-LNP58_RS10035;Dbxref=Genbank:WP_011409744.1;Name=WP_011409744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501329.1;locus_tag=LNP58_RS10035;product=Tox-REase-5 domain-containing protein;protein_id=WP_011409744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2109255 2110013 . + . ID=gene-LNP58_RS10040;Name=LNP58_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10040;old_locus_tag=LNP58_10030 NZ_CP086372.1 Protein Homology CDS 2109255 2110013 . + 0 ID=cds-WP_011409743.1;Parent=gene-LNP58_RS10040;Dbxref=Genbank:WP_011409743.1;Name=WP_011409743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305439.1;locus_tag=LNP58_RS10040;product=Imm52 family immunity protein;protein_id=WP_011409743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2110222 2110470 . - . ID=gene-LNP58_RS10045;Name=LNP58_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10045;old_locus_tag=LNP58_10035 NZ_CP086372.1 Protein Homology CDS 2110222 2110470 . - 0 ID=cds-WP_011260739.1;Parent=gene-LNP58_RS10045;Dbxref=Genbank:WP_011260739.1;Name=WP_011260739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260739.1;locus_tag=LNP58_RS10045;product=helix-turn-helix transcriptional regulator;protein_id=WP_011260739.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2110632 2110898 . + . ID=gene-LNP58_RS10050;Name=LNP58_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10050;old_locus_tag=LNP58_10040 NZ_CP086372.1 Protein Homology CDS 2110632 2110898 . + 0 ID=cds-WP_042465346.1;Parent=gene-LNP58_RS10050;Dbxref=Genbank:WP_042465346.1;Name=WP_042465346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381297.1;locus_tag=LNP58_RS10050;product=hypothetical protein;protein_id=WP_042465346.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2110995 2111072 . - . ID=gene-LNP58_RS10055;Name=LNP58_RS10055;end_range=2111072,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10055;old_locus_tag=LNP58_10045;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2110995 2111072 . - 0 ID=cds-LNP58_RS10055;Parent=gene-LNP58_RS10055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2111072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159991.1;locus_tag=LNP58_RS10055;partial=true;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2111231 2112445 . + . ID=gene-LNP58_RS10060;Name=LNP58_RS10060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10060;old_locus_tag=LNP58_10050;pseudo=true NZ_CP086372.1 Protein Homology CDS 2111231 2112445 . + 0 ID=cds-LNP58_RS10060;Parent=gene-LNP58_RS10060;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS10060;product=IS4-like element ISXo14 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2112728 2113923 . - . ID=gene-LNP58_RS10065;Name=LNP58_RS10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10065;old_locus_tag=LNP58_10055;pseudo=true NZ_CP086372.1 Protein Homology CDS 2112728 2113923 . - 0 ID=cds-LNP58_RS10065;Parent=gene-LNP58_RS10065;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS10065;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2114075 2114938 . + . ID=gene-LNP58_RS10070;Name=LNP58_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10070;old_locus_tag=LNP58_10060 NZ_CP086372.1 Protein Homology CDS 2114075 2114938 . + 0 ID=cds-WP_069960048.1;Parent=gene-LNP58_RS10070;Dbxref=Genbank:WP_069960048.1;Name=WP_069960048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156935.1;locus_tag=LNP58_RS10070;product=DUF2884 family protein;protein_id=WP_069960048.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2115185 2115613 . - . ID=gene-LNP58_RS10075;Name=LNP58_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10075;old_locus_tag=LNP58_10065 NZ_CP086372.1 Protein Homology CDS 2115185 2115613 . - 0 ID=cds-WP_011409738.1;Parent=gene-LNP58_RS10075;Dbxref=Genbank:WP_011409738.1;Name=WP_011409738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007509237.1;locus_tag=LNP58_RS10075;product=organic hydroperoxide resistance protein;protein_id=WP_011409738.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2115715 2116173 . - . ID=gene-LNP58_RS10080;Name=LNP58_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10080;old_locus_tag=LNP58_10070 NZ_CP086372.1 Protein Homology CDS 2115715 2116173 . - 0 ID=cds-WP_011260733.1;Parent=gene-LNP58_RS10080;Dbxref=Genbank:WP_011260733.1;Name=WP_011260733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968315.1;locus_tag=LNP58_RS10080;product=MarR family transcriptional regulator;protein_id=WP_011260733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2116520 2116596 . + . ID=gene-LNP58_RS10085;Name=LNP58_RS10085;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10085;old_locus_tag=LNP58_10075 NZ_CP086372.1 cmsearch ncRNA 2116520 2116596 . + . ID=rna-LNP58_RS10085;Parent=gene-LNP58_RS10085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10085;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2116520 2116596 . + . ID=exon-LNP58_RS10085-1;Parent=rna-LNP58_RS10085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10085;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2116690 2117631 . + . ID=gene-LNP58_RS10090;Name=LNP58_RS10090;end_range=2117631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10090;old_locus_tag=LNP58_10080;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2116690 2117631 . + 0 ID=cds-LNP58_RS10090;Parent=gene-LNP58_RS10090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2117631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052641.1;locus_tag=LNP58_RS10090;partial=true;product=DUF3182 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2117640 2118596 . - . ID=gene-LNP58_RS10095;Name=LNP58_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10095;old_locus_tag=LNP58_10085 NZ_CP086372.1 Protein Homology CDS 2117640 2118596 . - 0 ID=cds-WP_228329594.1;Parent=gene-LNP58_RS10095;Dbxref=Genbank:WP_228329594.1;Name=WP_228329594.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS10095;product=IS30 family transposase;protein_id=WP_228329594.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2118699 2120018 . - . ID=gene-LNP58_RS10100;Name=LNP58_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10100;old_locus_tag=LNP58_10090 NZ_CP086372.1 Protein Homology CDS 2118699 2120018 . - 0 ID=cds-WP_011409735.1;Parent=gene-LNP58_RS10100;Dbxref=Genbank:WP_011409735.1;Name=WP_011409735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS10100;product=IS701-like element ISXo15 family transposase;protein_id=WP_011409735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2120147 2120945 . + . ID=gene-LNP58_RS10105;Name=LNP58_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10105;old_locus_tag=LNP58_10095 NZ_CP086372.1 Protein Homology CDS 2120147 2120418 . + 0 ID=cds-WP_109182041.1;Parent=gene-LNP58_RS10105;Dbxref=Genbank:WP_109182041.1;Name=WP_109182041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10105;product=IS5 family transposase;protein_id=WP_109182041.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2120417 2120945 . + 1 ID=cds-WP_109182041.1;Parent=gene-LNP58_RS10105;Dbxref=Genbank:WP_109182041.1;Name=WP_109182041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10105;product=IS5 family transposase;protein_id=WP_109182041.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2120978 2121658 . - . ID=gene-LNP58_RS10110;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=LNP58_RS10110;old_locus_tag=LNP58_10100 NZ_CP086372.1 Protein Homology CDS 2120978 2121658 . - 0 ID=cds-WP_011260727.1;Parent=gene-LNP58_RS10110;Dbxref=Genbank:WP_011260727.1;Name=WP_011260727.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260727.1;locus_tag=LNP58_RS10110;product=HTH-type transcriptional repressor FabR;protein_id=WP_011260727.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2121751 2122827 . + . ID=gene-LNP58_RS10115;Name=LNP58_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10115;old_locus_tag=LNP58_10105 NZ_CP086372.1 Protein Homology CDS 2121751 2122827 . + 0 ID=cds-WP_011409734.1;Parent=gene-LNP58_RS10115;Dbxref=Genbank:WP_011409734.1;Name=WP_011409734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974569.1;locus_tag=LNP58_RS10115;product=ferredoxin reductase;protein_id=WP_011409734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2122837 2123958 . + . ID=gene-LNP58_RS10120;Name=LNP58_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10120;old_locus_tag=LNP58_10110 NZ_CP086372.1 Protein Homology CDS 2122837 2123958 . + 0 ID=cds-WP_011260725.1;Parent=gene-LNP58_RS10120;Dbxref=Genbank:WP_011260725.1;Name=WP_011260725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348875.1;locus_tag=LNP58_RS10120;product=acyl-CoA desaturase;protein_id=WP_011260725.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2124024 2125130 . - . ID=gene-LNP58_RS10125;Name=LNP58_RS10125;end_range=2125130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10125;old_locus_tag=LNP58_10115;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2124024 2125130 . - 0 ID=cds-LNP58_RS10125;Parent=gene-LNP58_RS10125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2125130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302203.1;locus_tag=LNP58_RS10125;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2125141 2125904 . - . ID=gene-LNP58_RS10130;Name=LNP58_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10130;old_locus_tag=LNP58_10120 NZ_CP086372.1 Protein Homology CDS 2125589 2125904 . - 0 ID=cds-WP_109182040.1;Parent=gene-LNP58_RS10130;Dbxref=Genbank:WP_109182040.1;Name=WP_109182040.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS10130;product=IS5 family transposase;protein_id=WP_109182040.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2125141 2125589 . - 2 ID=cds-WP_109182040.1;Parent=gene-LNP58_RS10130;Dbxref=Genbank:WP_109182040.1;Name=WP_109182040.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS10130;product=IS5 family transposase;protein_id=WP_109182040.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2125950 2126402 . - . ID=gene-LNP58_RS10135;Name=LNP58_RS10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10135;old_locus_tag=LNP58_10125;partial=true;pseudo=true;start_range=.,2125950 NZ_CP086372.1 Protein Homology CDS 2125950 2126402 . - 0 ID=cds-LNP58_RS10135;Parent=gene-LNP58_RS10135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167492.1;locus_tag=LNP58_RS10135;partial=true;product=CSS-motif domain-containing protein;pseudo=true;start_range=.,2125950;transl_table=11 NZ_CP086372.1 RefSeq gene 2126632 2127588 . - . ID=gene-LNP58_RS10140;Name=LNP58_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10140;old_locus_tag=LNP58_10130 NZ_CP086372.1 Protein Homology CDS 2126632 2127588 . - 0 ID=cds-WP_109182039.1;Parent=gene-LNP58_RS10140;Dbxref=Genbank:WP_109182039.1;Name=WP_109182039.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS10140;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182039.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2127842 2128018 . + . ID=gene-LNP58_RS10145;Name=LNP58_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10145;old_locus_tag=LNP58_10135 NZ_CP086372.1 Protein Homology CDS 2127842 2128018 . + 0 ID=cds-WP_010374782.1;Parent=gene-LNP58_RS10145;Dbxref=Genbank:WP_010374782.1;Name=WP_010374782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374782.1;locus_tag=LNP58_RS10145;product=hypothetical protein;protein_id=WP_010374782.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2128173 2128669 . - . ID=gene-LNP58_RS10150;Name=LNP58_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10150;old_locus_tag=LNP58_10140;pseudo=true NZ_CP086372.1 Protein Homology CDS 2128173 2128669 . - 0 ID=cds-LNP58_RS10150;Parent=gene-LNP58_RS10150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486500.1;locus_tag=LNP58_RS10150;product=lipocalin family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2128894 2129692 . - . ID=gene-LNP58_RS10155;Name=LNP58_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10155;old_locus_tag=LNP58_10145 NZ_CP086372.1 Protein Homology CDS 2129421 2129692 . - 0 ID=cds-WP_094187716.1;Parent=gene-LNP58_RS10155;Dbxref=Genbank:WP_094187716.1;Name=WP_094187716.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10155;product=IS5 family transposase;protein_id=WP_094187716.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2128894 2129422 . - 1 ID=cds-WP_094187716.1;Parent=gene-LNP58_RS10155;Dbxref=Genbank:WP_094187716.1;Name=WP_094187716.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10155;product=IS5 family transposase;protein_id=WP_094187716.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2129732 2129808 . - . ID=gene-LNP58_RS10160;Name=LNP58_RS10160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10160;old_locus_tag=LNP58_10150 NZ_CP086372.1 cmsearch ncRNA 2129732 2129808 . - . ID=rna-LNP58_RS10160;Parent=gene-LNP58_RS10160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10160;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2129732 2129808 . - . ID=exon-LNP58_RS10160-1;Parent=rna-LNP58_RS10160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10160;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2130109 2131143 . - . ID=gene-LNP58_RS10165;Name=LNP58_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10165;old_locus_tag=LNP58_10155 NZ_CP086372.1 Protein Homology CDS 2130109 2131143 . - 0 ID=cds-WP_011260718.1;Parent=gene-LNP58_RS10165;Dbxref=Genbank:WP_011260718.1;Name=WP_011260718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573829.1;locus_tag=LNP58_RS10165;product=glycoside hydrolase family 43 protein;protein_id=WP_011260718.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2131175 2132662 . - . ID=gene-LNP58_RS10170;Name=LNP58_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10170;old_locus_tag=LNP58_10160 NZ_CP086372.1 Protein Homology CDS 2131175 2132662 . - 0 ID=cds-WP_011409728.1;Parent=gene-LNP58_RS10170;Dbxref=Genbank:WP_011409728.1;Name=WP_011409728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155198.1;locus_tag=LNP58_RS10170;product=MFS transporter;protein_id=WP_011409728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2132761 2135694 . - . ID=gene-LNP58_RS10175;Name=LNP58_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10175;old_locus_tag=LNP58_10165 NZ_CP086372.1 Protein Homology CDS 2132761 2135694 . - 0 ID=cds-WP_011409727.1;Parent=gene-LNP58_RS10175;Dbxref=Genbank:WP_011409727.1;Name=WP_011409727.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155199.1;locus_tag=LNP58_RS10175;product=TonB-dependent receptor;protein_id=WP_011409727.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2136156 2137457 . + . ID=gene-LNP58_RS10180;Name=LNP58_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10180;old_locus_tag=LNP58_10170 NZ_CP086372.1 Protein Homology CDS 2136156 2137457 . + 0 ID=cds-WP_042465333.1;Parent=gene-LNP58_RS10180;Dbxref=Genbank:WP_042465333.1;Name=WP_042465333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349110.1;locus_tag=LNP58_RS10180;product=MFS transporter;protein_id=WP_042465333.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2137467 2138457 . + . ID=gene-LNP58_RS10185;Name=LNP58_RS10185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10185;old_locus_tag=LNP58_10175;pseudo=true NZ_CP086372.1 Protein Homology CDS 2137467 2138457 . + 0 ID=cds-LNP58_RS10185;Parent=gene-LNP58_RS10185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485050.1;locus_tag=LNP58_RS10185;product=endo-1%2C4-beta-xylanase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2138853 2139080 . - . ID=gene-LNP58_RS10190;Name=LNP58_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10190;old_locus_tag=LNP58_10180 NZ_CP086372.1 Protein Homology CDS 2138853 2139080 . - 0 ID=cds-WP_228329752.1;Parent=gene-LNP58_RS10190;Dbxref=Genbank:WP_228329752.1;Name=WP_228329752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155203.1;locus_tag=LNP58_RS10190;product=hypothetical protein;protein_id=WP_228329752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2138970 2139851 . + . ID=gene-LNP58_RS10195;Name=LNP58_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10195;old_locus_tag=LNP58_10185 NZ_CP086372.1 Protein Homology CDS 2138970 2139851 . + 0 ID=cds-WP_228329751.1;Parent=gene-LNP58_RS10195;Dbxref=Genbank:WP_228329751.1;Name=WP_228329751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012551.2;locus_tag=LNP58_RS10195;product=endo-1%2C4-beta-xylanase;protein_id=WP_228329751.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2139892 2141310 . + . ID=gene-LNP58_RS10200;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=LNP58_RS10200;old_locus_tag=LNP58_10190 NZ_CP086372.1 Protein Homology CDS 2139892 2141310 . + 0 ID=cds-WP_011260712.1;Parent=gene-LNP58_RS10200;Dbxref=Genbank:WP_011260712.1;Name=WP_011260712.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916173.1;locus_tag=LNP58_RS10200;product=glucuronate isomerase;protein_id=WP_011260712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2141538 2142593 . + . ID=gene-LNP58_RS10205;Name=LNP58_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10205;old_locus_tag=LNP58_10195 NZ_CP086372.1 Protein Homology CDS 2141538 2142593 . + 0 ID=cds-WP_011260711.1;Parent=gene-LNP58_RS10205;Dbxref=Genbank:WP_011260711.1;Name=WP_011260711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154877.1;locus_tag=LNP58_RS10205;product=hypothetical protein;protein_id=WP_011260711.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2142743 2143141 . - . ID=gene-LNP58_RS10210;Name=LNP58_RS10210;end_range=2143141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10210;old_locus_tag=LNP58_10200;partial=true;pseudo=true;start_range=.,2142743 NZ_CP086372.1 Protein Homology CDS 2142743 2143141 . - 0 ID=cds-LNP58_RS10210;Parent=gene-LNP58_RS10210;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2143141,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612348.1;locus_tag=LNP58_RS10210;partial=true;product=transposase;pseudo=true;start_range=.,2142743;transl_table=11 NZ_CP086372.1 RefSeq gene 2143205 2143345 . + . ID=gene-LNP58_RS10215;Name=LNP58_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10215;old_locus_tag=LNP58_10205 NZ_CP086372.1 GeneMarkS-2+ CDS 2143205 2143345 . + 0 ID=cds-WP_228329593.1;Parent=gene-LNP58_RS10215;Dbxref=Genbank:WP_228329593.1;Name=WP_228329593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS10215;product=hypothetical protein;protein_id=WP_228329593.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2143571 2145043 . - . ID=gene-LNP58_RS10220;Name=LNP58_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10220;old_locus_tag=LNP58_10210 NZ_CP086372.1 Protein Homology CDS 2143571 2145043 . - 0 ID=cds-WP_011260709.1;Parent=gene-LNP58_RS10220;Dbxref=Genbank:WP_011260709.1;Name=WP_011260709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922858.1;locus_tag=LNP58_RS10220;product=mannitol dehydrogenase family protein;protein_id=WP_011260709.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2145266 2147980 . - . ID=gene-LNP58_RS10225;Name=LNP58_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10225;old_locus_tag=LNP58_10215 NZ_CP086372.1 Protein Homology CDS 2145266 2147980 . - 0 ID=cds-WP_080493943.1;Parent=gene-LNP58_RS10225;Dbxref=Genbank:WP_080493943.1;Name=WP_080493943.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443780.1;locus_tag=LNP58_RS10225;product=glycoside hydrolase family 3 protein;protein_id=WP_080493943.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2147983 2149683 . - . ID=gene-LNP58_RS10230;Name=LNP58_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10230;old_locus_tag=LNP58_10220 NZ_CP086372.1 Protein Homology CDS 2147983 2149683 . - 0 ID=cds-WP_011260707.1;Parent=gene-LNP58_RS10230;Dbxref=Genbank:WP_011260707.1;Name=WP_011260707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260707.1;locus_tag=LNP58_RS10230;product=glycoside hydrolase family 43 protein;protein_id=WP_011260707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2149683 2150942 . - . ID=gene-LNP58_RS10235;Name=LNP58_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10235;old_locus_tag=LNP58_10225 NZ_CP086372.1 Protein Homology CDS 2149683 2150942 . - 0 ID=cds-WP_011409724.1;Parent=gene-LNP58_RS10235;Dbxref=Genbank:WP_011409724.1;Name=WP_011409724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349089.1;locus_tag=LNP58_RS10235;product=D-galactonate dehydratase family protein;protein_id=WP_011409724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2150954 2152918 . - . ID=gene-LNP58_RS10240;Name=LNP58_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10240;old_locus_tag=LNP58_10230 NZ_CP086372.1 Protein Homology CDS 2150954 2152918 . - 0 ID=cds-WP_011409723.1;Parent=gene-LNP58_RS10240;Dbxref=Genbank:WP_011409723.1;Name=WP_011409723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155225.1;locus_tag=LNP58_RS10240;product=9-O-acetylesterase;protein_id=WP_011409723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2152915 2155110 . - . ID=gene-LNP58_RS10245;Name=LNP58_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10245;old_locus_tag=LNP58_10235 NZ_CP086372.1 Protein Homology CDS 2152915 2155110 . - 0 ID=cds-WP_011409722.1;Parent=gene-LNP58_RS10245;Dbxref=Genbank:WP_011409722.1;Name=WP_011409722.1;Ontology_term=GO:0045493,GO:0046559;gbkey=CDS;go_function=alpha-glucuronidase activity|0046559||IEA;go_process=xylan catabolic process|0045493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409722.1;locus_tag=LNP58_RS10245;product=alpha-glucuronidase family glycosyl hydrolase;protein_id=WP_011409722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2155228 2155392 . - . ID=gene-LNP58_RS10250;Name=LNP58_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10250;old_locus_tag=LNP58_10240 NZ_CP086372.1 Protein Homology CDS 2155228 2155392 . - 0 ID=cds-WP_012443786.1;Parent=gene-LNP58_RS10250;Dbxref=Genbank:WP_012443786.1;Name=WP_012443786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443786.1;locus_tag=LNP58_RS10250;product=hypothetical protein;protein_id=WP_012443786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2155343 2156353 . + . ID=gene-LNP58_RS10255;Name=LNP58_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10255;old_locus_tag=LNP58_10245 NZ_CP086372.1 Protein Homology CDS 2155343 2156353 . + 0 ID=cds-WP_012443787.1;Parent=gene-LNP58_RS10255;Dbxref=Genbank:WP_012443787.1;Name=WP_012443787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974622.1;locus_tag=LNP58_RS10255;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_012443787.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2156579 2157916 . - . ID=gene-LNP58_RS10260;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LNP58_RS10260;old_locus_tag=LNP58_10250 NZ_CP086372.1 Protein Homology CDS 2156579 2157916 . - 0 ID=cds-WP_011259480.1;Parent=gene-LNP58_RS10260;Dbxref=Genbank:WP_011259480.1;Name=WP_011259480.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=LNP58_RS10260;product=xylose isomerase;protein_id=WP_011259480.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2158520 2159437 . + . ID=gene-LNP58_RS10265;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LNP58_RS10265;old_locus_tag=LNP58_10255 NZ_CP086372.1 Protein Homology CDS 2158520 2159437 . + 0 ID=cds-WP_011260702.1;Parent=gene-LNP58_RS10265;Dbxref=Genbank:WP_011260702.1;Name=WP_011260702.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374500.1;locus_tag=LNP58_RS10265;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_011260702.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2159501 2160406 . + . ID=gene-LNP58_RS10270;Name=LNP58_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10270;old_locus_tag=LNP58_10260 NZ_CP086372.1 Protein Homology CDS 2159501 2160406 . + 0 ID=cds-WP_011409720.1;Parent=gene-LNP58_RS10270;Dbxref=Genbank:WP_011409720.1;Name=WP_011409720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1;locus_tag=LNP58_RS10270;product=recombination-associated protein RdgC;protein_id=WP_011409720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2161033 2161818 . + . ID=gene-LNP58_RS10275;Name=LNP58_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10275;old_locus_tag=LNP58_10265 NZ_CP086372.1 Protein Homology CDS 2161033 2161818 . + 0 ID=cds-WP_011409719.1;Parent=gene-LNP58_RS10275;Dbxref=Genbank:WP_011409719.1;Name=WP_011409719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374496.1;locus_tag=LNP58_RS10275;product=SprT family zinc-dependent metalloprotease;protein_id=WP_011409719.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2161881 2161956 . + . ID=gene-LNP58_RS10280;Name=LNP58_RS10280;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10280;old_locus_tag=LNP58_10270 NZ_CP086372.1 cmsearch ncRNA 2161881 2161956 . + . ID=rna-LNP58_RS10280;Parent=gene-LNP58_RS10280;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10280;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2161881 2161956 . + . ID=exon-LNP58_RS10280-1;Parent=rna-LNP58_RS10280;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10280;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2162089 2162547 . - . ID=gene-LNP58_RS10285;Name=LNP58_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10285;old_locus_tag=LNP58_10275 NZ_CP086372.1 Protein Homology CDS 2162089 2162547 . - 0 ID=cds-WP_011409718.1;Parent=gene-LNP58_RS10285;Dbxref=Genbank:WP_011409718.1;Name=WP_011409718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409718.1;locus_tag=LNP58_RS10285;product=hypothetical protein;protein_id=WP_011409718.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2162628 2163478 . - . ID=gene-LNP58_RS10290;Name=LNP58_RS10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10290;old_locus_tag=LNP58_10280;pseudo=true NZ_CP086372.1 Protein Homology CDS 2162628 2163478 . - 0 ID=cds-LNP58_RS10290;Parent=gene-LNP58_RS10290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904259.1;locus_tag=LNP58_RS10290;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2163481 2164446 . - . ID=gene-LNP58_RS10295;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LNP58_RS10295;old_locus_tag=LNP58_10285 NZ_CP086372.1 Protein Homology CDS 2163481 2164446 . - 0 ID=cds-WP_011409716.1;Parent=gene-LNP58_RS10295;Dbxref=Genbank:WP_011409716.1;Name=WP_011409716.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505180.1;locus_tag=LNP58_RS10295;product=ferrochelatase;protein_id=WP_011409716.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2164601 2165503 . + . ID=gene-LNP58_RS10300;Name=LNP58_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10300;old_locus_tag=LNP58_10290 NZ_CP086372.1 Protein Homology CDS 2164601 2165503 . + 0 ID=cds-WP_011409715.1;Parent=gene-LNP58_RS10300;Dbxref=Genbank:WP_011409715.1;Name=WP_011409715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154679.1;locus_tag=LNP58_RS10300;product=YSC84-related protein;protein_id=WP_011409715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2165576 2165803 . + . ID=gene-LNP58_RS10305;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LNP58_RS10305;old_locus_tag=LNP58_10295 NZ_CP086372.1 Protein Homology CDS 2165576 2165803 . + 0 ID=cds-WP_003484969.1;Parent=gene-LNP58_RS10305;Dbxref=Genbank:WP_003484969.1;Name=WP_003484969.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449086.1;locus_tag=LNP58_RS10305;product=Sec-independent protein translocase subunit TatA;protein_id=WP_003484969.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2165819 2166454 . + . ID=gene-LNP58_RS10310;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LNP58_RS10310;old_locus_tag=LNP58_10300 NZ_CP086372.1 Protein Homology CDS 2165819 2166454 . + 0 ID=cds-WP_011409714.1;Parent=gene-LNP58_RS10310;Dbxref=Genbank:WP_011409714.1;Name=WP_011409714.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349077.1;locus_tag=LNP58_RS10310;product=Sec-independent protein translocase protein TatB;protein_id=WP_011409714.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2166451 2167206 . + . ID=gene-LNP58_RS10315;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LNP58_RS10315;old_locus_tag=LNP58_10305 NZ_CP086372.1 Protein Homology CDS 2166451 2167206 . + 0 ID=cds-WP_011260694.1;Parent=gene-LNP58_RS10315;Dbxref=Genbank:WP_011260694.1;Name=WP_011260694.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302261.1;locus_tag=LNP58_RS10315;product=twin-arginine translocase subunit TatC;protein_id=WP_011260694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2167358 2168257 . - . ID=gene-LNP58_RS10320;Name=LNP58_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10320;old_locus_tag=LNP58_10310 NZ_CP086372.1 Protein Homology CDS 2167358 2168257 . - 0 ID=cds-WP_011260693.1;Parent=gene-LNP58_RS10320;Dbxref=Genbank:WP_011260693.1;Name=WP_011260693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154682.1;locus_tag=LNP58_RS10320;product=BPSS1780 family membrane protein;protein_id=WP_011260693.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2168317 2169069 . - . ID=gene-LNP58_RS10325;Name=LNP58_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10325;old_locus_tag=LNP58_10315 NZ_CP086372.1 Protein Homology CDS 2168317 2169069 . - 0 ID=cds-WP_011409712.1;Parent=gene-LNP58_RS10325;Dbxref=Genbank:WP_011409712.1;Name=WP_011409712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154683.1;locus_tag=LNP58_RS10325;product=glutamine amidotransferase;protein_id=WP_011409712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2169613 2170411 . - . ID=gene-LNP58_RS10330;Name=LNP58_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10330;old_locus_tag=LNP58_10320 NZ_CP086372.1 Protein Homology CDS 2170140 2170411 . - 0 ID=cds-WP_115801913.1;Parent=gene-LNP58_RS10330;Dbxref=Genbank:WP_115801913.1;Name=WP_115801913.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10330;product=IS5 family transposase;protein_id=WP_115801913.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2169613 2170141 . - 1 ID=cds-WP_115801913.1;Parent=gene-LNP58_RS10330;Dbxref=Genbank:WP_115801913.1;Name=WP_115801913.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10330;product=IS5 family transposase;protein_id=WP_115801913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2170510 2179335 . + . ID=gene-LNP58_RS10335;Name=LNP58_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10335;old_locus_tag=LNP58_10325 NZ_CP086372.1 Protein Homology CDS 2170510 2179335 . + 0 ID=cds-WP_153303324.1;Parent=gene-LNP58_RS10335;Dbxref=Genbank:WP_153303324.1;Name=WP_153303324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260690.1;locus_tag=LNP58_RS10335;product=hypothetical protein;protein_id=WP_153303324.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2179721 2181535 . - . ID=gene-LNP58_RS10340;Name=LNP58_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10340;old_locus_tag=LNP58_10330 NZ_CP086372.1 Protein Homology CDS 2179721 2181535 . - 0 ID=cds-WP_011409709.1;Parent=gene-LNP58_RS10340;Dbxref=Genbank:WP_011409709.1;Name=WP_011409709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803759.1;locus_tag=LNP58_RS10340;product=GspE/PulE family protein;protein_id=WP_011409709.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2181625 2182533 . + . ID=gene-LNP58_RS10345;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LNP58_RS10345;old_locus_tag=LNP58_10335 NZ_CP086372.1 Protein Homology CDS 2181625 2182533 . + 0 ID=cds-WP_011409708.1;Parent=gene-LNP58_RS10345;Dbxref=Genbank:WP_011409708.1;Name=WP_011409708.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1;locus_tag=LNP58_RS10345;product=glycine--tRNA ligase subunit alpha;protein_id=WP_011409708.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2182822 2185059 . + . ID=gene-LNP58_RS10350;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LNP58_RS10350;old_locus_tag=LNP58_10340 NZ_CP086372.1 Protein Homology CDS 2182822 2185059 . + 0 ID=cds-WP_011409707.1;Parent=gene-LNP58_RS10350;Dbxref=Genbank:WP_011409707.1;Name=WP_011409707.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409707.1;locus_tag=LNP58_RS10350;product=glycine--tRNA ligase subunit beta;protein_id=WP_011409707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2185059 2186648 . + . ID=gene-LNP58_RS10355;Name=LNP58_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10355;old_locus_tag=LNP58_10345 NZ_CP086372.1 Protein Homology CDS 2185059 2186648 . + 0 ID=cds-WP_075242290.1;Parent=gene-LNP58_RS10355;Dbxref=Genbank:WP_075242290.1;Name=WP_075242290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374446.1;locus_tag=LNP58_RS10355;product=sulfotransferase;protein_id=WP_075242290.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2186901 2189600 . - . ID=gene-LNP58_RS10360;Name=LNP58_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10360;old_locus_tag=LNP58_10350 NZ_CP086372.1 Protein Homology CDS 2186901 2189600 . - 0 ID=cds-WP_173340400.1;Parent=gene-LNP58_RS10360;Dbxref=Genbank:WP_173340400.1;Name=WP_173340400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163068.1;locus_tag=LNP58_RS10360;product=TonB-dependent receptor;protein_id=WP_173340400.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2189837 2190106 . - . ID=gene-LNP58_RS10365;Name=LNP58_RS10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10365;old_locus_tag=LNP58_10355;partial=true;pseudo=true;start_range=.,2189837 NZ_CP086372.1 Protein Homology CDS 2189837 2190106 . - 0 ID=cds-LNP58_RS10365;Parent=gene-LNP58_RS10365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS10365;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,2189837;transl_table=11 NZ_CP086372.1 RefSeq gene 2190131 2190265 . - . ID=gene-LNP58_RS23420;Name=LNP58_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23420 NZ_CP086372.1 GeneMarkS-2+ CDS 2190131 2190265 . - 0 ID=cds-WP_012443802.1;Parent=gene-LNP58_RS23420;Dbxref=Genbank:WP_012443802.1;Name=WP_012443802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23420;product=hypothetical protein;protein_id=WP_012443802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2190420 2190818 . - . ID=gene-LNP58_RS10370;Name=LNP58_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10370 NZ_CP086372.1 Protein Homology CDS 2190420 2190818 . - 0 ID=cds-WP_229001929.1;Parent=gene-LNP58_RS10370;Dbxref=Genbank:WP_229001929.1;Name=WP_229001929.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LNP58_RS10370;product=ATP-binding cassette domain-containing protein;protein_id=WP_229001929.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2190763 2191107 . - . ID=gene-LNP58_RS10375;Name=LNP58_RS10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10375;partial=true;pseudo=true;start_range=.,2190763 NZ_CP086372.1 Protein Homology CDS 2190763 2191107 . - 0 ID=cds-LNP58_RS10375;Parent=gene-LNP58_RS10375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LNP58_RS10375;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,2190763;transl_table=11 NZ_CP086372.1 RefSeq gene 2191165 2192259 . - . ID=gene-LNP58_RS10380;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LNP58_RS10380;old_locus_tag=LNP58_10365 NZ_CP086372.1 Protein Homology CDS 2191165 2192259 . - 0 ID=cds-WP_011409702.1;Parent=gene-LNP58_RS10380;Dbxref=Genbank:WP_011409702.1;Name=WP_011409702.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974994.1;locus_tag=LNP58_RS10380;product=cell division protein ZapE;protein_id=WP_011409702.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2192338 2193000 . - . ID=gene-LNP58_RS10385;Name=LNP58_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10385;old_locus_tag=LNP58_10370 NZ_CP086372.1 Protein Homology CDS 2192338 2193000 . - 0 ID=cds-WP_011409701.1;Parent=gene-LNP58_RS10385;Dbxref=Genbank:WP_011409701.1;Name=WP_011409701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370426.1;locus_tag=LNP58_RS10385;product=alpha/beta fold hydrolase;protein_id=WP_011409701.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2193067 2193942 . + . ID=gene-LNP58_RS10390;Name=LNP58_RS10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10390;old_locus_tag=LNP58_10375;pseudo=true NZ_CP086372.1 Protein Homology CDS 2193067 2193942 . + 0 ID=cds-LNP58_RS10390;Parent=gene-LNP58_RS10390;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379895.1;locus_tag=LNP58_RS10390;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2194041 2195354 . + . ID=gene-LNP58_RS10395;Name=LNP58_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10395;old_locus_tag=LNP58_10380 NZ_CP086372.1 Protein Homology CDS 2194041 2195354 . + 0 ID=cds-WP_011260681.1;Parent=gene-LNP58_RS10395;Dbxref=Genbank:WP_011260681.1;Name=WP_011260681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260681.1;locus_tag=LNP58_RS10395;product=type III secretion system effector protein XopR;protein_id=WP_011260681.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2195469 2196794 . - . ID=gene-LNP58_RS10400;Name=LNP58_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10400;old_locus_tag=LNP58_10385 NZ_CP086372.1 Protein Homology CDS 2195469 2196794 . - 0 ID=cds-WP_011260680.1;Parent=gene-LNP58_RS10400;Dbxref=Genbank:WP_011260680.1;Name=WP_011260680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849151.1;locus_tag=LNP58_RS10400;product=GTP-binding protein;protein_id=WP_011260680.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2196856 2197242 . + . ID=gene-LNP58_RS10405;Name=LNP58_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10405;old_locus_tag=LNP58_10390 NZ_CP086372.1 Protein Homology CDS 2196856 2197242 . + 0 ID=cds-WP_011260679.1;Parent=gene-LNP58_RS10405;Dbxref=Genbank:WP_011260679.1;Name=WP_011260679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117606.1;locus_tag=LNP58_RS10405;product=MerC family mercury resistance protein;protein_id=WP_011260679.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2197333 2199051 . - . ID=gene-LNP58_RS10410;Name=LNP58_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10410;old_locus_tag=LNP58_10395 NZ_CP086372.1 Protein Homology CDS 2197333 2199051 . - 0 ID=cds-WP_011409700.1;Parent=gene-LNP58_RS10410;Dbxref=Genbank:WP_011409700.1;Name=WP_011409700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089040.1;locus_tag=LNP58_RS10410;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_011409700.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2199323 2199841 . - . ID=gene-LNP58_RS10415;Name=LNP58_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10415;old_locus_tag=LNP58_10400 NZ_CP086372.1 Protein Homology CDS 2199323 2199841 . - 0 ID=cds-WP_011409699.1;Parent=gene-LNP58_RS10415;Dbxref=Genbank:WP_011409699.1;Name=WP_011409699.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921137.1;locus_tag=LNP58_RS10415;product=c-type cytochrome;protein_id=WP_011409699.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2200133 2200763 . + . ID=gene-LNP58_RS10420;Name=LNP58_RS10420;end_range=2200763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10420;old_locus_tag=LNP58_10405;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2200133 2200763 . + 0 ID=cds-LNP58_RS10420;Parent=gene-LNP58_RS10420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2200763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450084.1;locus_tag=LNP58_RS10420;partial=true;product=DUF4198 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2200960 2201271 . + . ID=gene-LNP58_RS10425;Name=LNP58_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10425;old_locus_tag=LNP58_10410 NZ_CP086372.1 Protein Homology CDS 2200960 2201271 . + 0 ID=cds-WP_075242289.1;Parent=gene-LNP58_RS10425;Dbxref=Genbank:WP_075242289.1;Name=WP_075242289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112733.1;locus_tag=LNP58_RS10425;product=DUF3649 domain-containing protein;protein_id=WP_075242289.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2201268 2202899 . + . ID=gene-LNP58_RS10430;Name=LNP58_RS10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10430;old_locus_tag=LNP58_10415;pseudo=true NZ_CP086372.1 Protein Homology CDS 2201268 2202899 . + 0 ID=cds-LNP58_RS10430;Parent=gene-LNP58_RS10430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156921.1;locus_tag=LNP58_RS10430;product=PepSY-associated TM helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2202896 2203231 . + . ID=gene-LNP58_RS10435;Name=LNP58_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10435;old_locus_tag=LNP58_10420 NZ_CP086372.1 Protein Homology CDS 2202896 2203231 . + 0 ID=cds-WP_011260672.1;Parent=gene-LNP58_RS10435;Dbxref=Genbank:WP_011260672.1;Name=WP_011260672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156920.1;locus_tag=LNP58_RS10435;product=DUF3325 domain-containing protein;protein_id=WP_011260672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2203274 2203462 . + . ID=gene-LNP58_RS10440;Name=LNP58_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10440;old_locus_tag=LNP58_10425 NZ_CP086372.1 GeneMarkS-2+ CDS 2203274 2203462 . + 0 ID=cds-WP_012443812.1;Parent=gene-LNP58_RS10440;Dbxref=Genbank:WP_012443812.1;Name=WP_012443812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS10440;product=hypothetical protein;protein_id=WP_012443812.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2203552 2203750 . - . ID=gene-LNP58_RS10445;Name=LNP58_RS10445;end_range=2203750,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10445;old_locus_tag=LNP58_10430;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2203552 2203750 . - 0 ID=cds-LNP58_RS10445;Parent=gene-LNP58_RS10445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2203750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050204.1;locus_tag=LNP58_RS10445;partial=true;product=RES domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2203793 2204413 . - . ID=gene-LNP58_RS10450;Name=LNP58_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10450;old_locus_tag=LNP58_10435 NZ_CP086372.1 Protein Homology CDS 2203793 2204413 . - 0 ID=cds-WP_011409694.1;Parent=gene-LNP58_RS10450;Dbxref=Genbank:WP_011409694.1;Name=WP_011409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921138.1;locus_tag=LNP58_RS10450;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011409694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2204542 2205705 . + . ID=gene-LNP58_RS10455;Name=LNP58_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10455;old_locus_tag=LNP58_10440 NZ_CP086372.1 Protein Homology CDS 2204542 2205705 . + 0 ID=cds-WP_011260670.1;Parent=gene-LNP58_RS10455;Dbxref=Genbank:WP_011260670.1;Name=WP_011260670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450091.1;locus_tag=LNP58_RS10455;product=isovaleryl-CoA dehydrogenase;protein_id=WP_011260670.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2205716 2207326 . + . ID=gene-LNP58_RS10460;Name=LNP58_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10460;old_locus_tag=LNP58_10445 NZ_CP086372.1 Protein Homology CDS 2205716 2207326 . + 0 ID=cds-WP_011260669.1;Parent=gene-LNP58_RS10460;Dbxref=Genbank:WP_011260669.1;Name=WP_011260669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437049.1;locus_tag=LNP58_RS10460;product=methylcrotonoyl-CoA carboxylase;protein_id=WP_011260669.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2207569 2209596 . + . ID=gene-LNP58_RS10465;Name=LNP58_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10465;old_locus_tag=LNP58_10450 NZ_CP086372.1 Protein Homology CDS 2207569 2209596 . + 0 ID=cds-WP_011260668.1;Parent=gene-LNP58_RS10465;Dbxref=Genbank:WP_011260668.1;Name=WP_011260668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089033.1;locus_tag=LNP58_RS10465;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_011260668.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2209696 2211780 . + . ID=gene-LNP58_RS10470;Name=LNP58_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10470;old_locus_tag=LNP58_10455 NZ_CP086372.1 Protein Homology CDS 2209696 2211780 . + 0 ID=cds-WP_011260667.1;Parent=gene-LNP58_RS10470;Dbxref=Genbank:WP_011260667.1;Name=WP_011260667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572258.1;locus_tag=LNP58_RS10470;product=S9 family peptidase;protein_id=WP_011260667.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2212067 2213083 . - . ID=gene-LNP58_RS10475;Name=LNP58_RS10475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10475;old_locus_tag=LNP58_10460;pseudo=true NZ_CP086372.1 Protein Homology CDS 2212067 2213083 . - 0 ID=cds-LNP58_RS10475;Parent=gene-LNP58_RS10475;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=LNP58_RS10475;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2213123 2213868 . + . ID=gene-LNP58_RS10480;Name=LNP58_RS10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10480;old_locus_tag=LNP58_10465;partial=true;pseudo=true;start_range=.,2213123 NZ_CP086372.1 Protein Homology CDS 2213123 2213868 . + 0 ID=cds-LNP58_RS10480;Parent=gene-LNP58_RS10480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015648155.1%2CRefSeq:WP_076611322.1;locus_tag=LNP58_RS10480;partial=true;product=transposase;pseudo=true;start_range=.,2213123;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2213930 2214097 . - . ID=gene-LNP58_RS10485;Name=LNP58_RS10485;end_range=2214097,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10485;old_locus_tag=LNP58_10470;partial=true;pseudo=true;start_range=.,2213930 NZ_CP086372.1 Protein Homology CDS 2213930 2214097 . - 0 ID=cds-LNP58_RS10485;Parent=gene-LNP58_RS10485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2214097,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10485;partial=true;product=transposase;pseudo=true;start_range=.,2213930;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2214228 2215267 . + . ID=gene-LNP58_RS10490;Name=LNP58_RS10490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10490;old_locus_tag=LNP58_10475;pseudo=true NZ_CP086372.1 Protein Homology CDS 2214228 2215267 . + 0 ID=cds-LNP58_RS10490;Parent=gene-LNP58_RS10490;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS10490;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2215565 2215747 . - . ID=gene-LNP58_RS10495;Name=LNP58_RS10495;end_range=2215747,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10495;old_locus_tag=LNP58_10480;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2215565 2215747 . - 0 ID=cds-LNP58_RS10495;Parent=gene-LNP58_RS10495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2215747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445996.1;locus_tag=LNP58_RS10495;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2215746 2216303 . + . ID=gene-LNP58_RS10500;Name=LNP58_RS10500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10500;old_locus_tag=LNP58_10485;partial=true;pseudo=true;start_range=.,2215746 NZ_CP086372.1 Protein Homology CDS 2215746 2216303 . + 0 ID=cds-LNP58_RS10500;Parent=gene-LNP58_RS10500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS10500;partial=true;product=transposase;pseudo=true;start_range=.,2215746;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2216324 2216440 . - . ID=gene-LNP58_RS10505;Name=LNP58_RS10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10505;old_locus_tag=LNP58_10490;partial=true;pseudo=true;start_range=.,2216324 NZ_CP086372.1 Protein Homology CDS 2216324 2216440 . - 0 ID=cds-LNP58_RS10505;Parent=gene-LNP58_RS10505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS10505;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2216324;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2216566 2217884 . + . ID=gene-LNP58_RS10510;Name=LNP58_RS10510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10510;old_locus_tag=LNP58_10495;pseudo=true NZ_CP086372.1 Protein Homology CDS 2216566 2217884 . + 0 ID=cds-LNP58_RS10510;Parent=gene-LNP58_RS10510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS10510;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2217968 2218315 . - . ID=gene-LNP58_RS10515;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=pseudogene;locus_tag=LNP58_RS10515;old_locus_tag=LNP58_10500;partial=true;pseudo=true;start_range=.,2217968 NZ_CP086372.1 Protein Homology CDS 2217968 2218315 . - 0 ID=cds-LNP58_RS10515;Parent=gene-LNP58_RS10515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370375.1;locus_tag=LNP58_RS10515;partial=true;product=hydroxyisourate hydrolase;pseudo=true;start_range=.,2217968;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2218328 2218744 . - . ID=gene-LNP58_RS10520;Name=LNP58_RS10520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10520;old_locus_tag=LNP58_10505;partial=true;pseudo=true;start_range=.,2218328 NZ_CP086372.1 Protein Homology CDS 2218328 2218744 . - 0 ID=cds-LNP58_RS10520;Parent=gene-LNP58_RS10520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509374.1;locus_tag=LNP58_RS10520;partial=true;product=FAD/NAD(P)-binding protein;pseudo=true;start_range=.,2218328;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2218744 2219280 . - . ID=gene-LNP58_RS10525;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=pseudogene;locus_tag=LNP58_RS10525;old_locus_tag=LNP58_10510;partial=true;pseudo=true;start_range=.,2218744 NZ_CP086372.1 Protein Homology CDS 2218744 2219280 . - 0 ID=cds-LNP58_RS10525;Parent=gene-LNP58_RS10525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572333.1;locus_tag=LNP58_RS10525;partial=true;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;pseudo=true;start_range=.,2218744;transl_table=11 NZ_CP086372.1 RefSeq gene 2219228 2219623 . - . ID=gene-LNP58_RS10530;Name=LNP58_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10530;old_locus_tag=LNP58_10515 NZ_CP086372.1 Protein Homology CDS 2219228 2219623 . - 0 ID=cds-WP_012443820.1;Parent=gene-LNP58_RS10530;Dbxref=Genbank:WP_012443820.1;Name=WP_012443820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450976.1;locus_tag=LNP58_RS10530;product=DUF3225 domain-containing protein;protein_id=WP_012443820.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2219620 2220510 . - . ID=gene-LNP58_RS10535;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LNP58_RS10535;old_locus_tag=LNP58_10520 NZ_CP086372.1 Protein Homology CDS 2219620 2220510 . - 0 ID=cds-WP_011260661.1;Parent=gene-LNP58_RS10535;Dbxref=Genbank:WP_011260661.1;Name=WP_011260661.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156075.1;locus_tag=LNP58_RS10535;product=allantoinase PuuE;protein_id=WP_011260661.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2220507 2221763 . - . ID=gene-LNP58_RS10540;Name=LNP58_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10540;old_locus_tag=LNP58_10525 NZ_CP086372.1 Protein Homology CDS 2220507 2221763 . - 0 ID=cds-WP_011260660.1;Parent=gene-LNP58_RS10540;Dbxref=Genbank:WP_011260660.1;Name=WP_011260660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379922.1;locus_tag=LNP58_RS10540;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_011260660.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2221753 2222959 . - . ID=gene-LNP58_RS10545;Name=LNP58_RS10545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10545;old_locus_tag=LNP58_10530;pseudo=true NZ_CP086372.1 Protein Homology CDS 2221753 2222959 . - 0 ID=cds-LNP58_RS10545;Parent=gene-LNP58_RS10545;Note=frameshifted%3B internal stop;Ontology_term=GO:0016813;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167651.1;locus_tag=LNP58_RS10545;product=allantoate amidohydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2223124 2224155 . - . ID=gene-LNP58_RS10550;Name=LNP58_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10550;old_locus_tag=LNP58_10535 NZ_CP086372.1 Protein Homology CDS 2223124 2224155 . - 0 ID=cds-WP_011260659.1;Parent=gene-LNP58_RS10550;Dbxref=Genbank:WP_011260659.1;Name=WP_011260659.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=LNP58_RS10550;product=IS630 family transposase;protein_id=WP_011260659.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2224217 2224980 . - . ID=gene-LNP58_RS10555;Name=LNP58_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10555;old_locus_tag=LNP58_10540 NZ_CP086372.1 Protein Homology CDS 2224665 2224980 . - 0 ID=cds-WP_094187715.1-3;Parent=gene-LNP58_RS10555;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS10555;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2224217 2224665 . - 2 ID=cds-WP_094187715.1-3;Parent=gene-LNP58_RS10555;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS10555;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2225023 2225271 . - . ID=gene-LNP58_RS10560;Name=LNP58_RS10560;end_range=2225271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10560;old_locus_tag=LNP58_10545;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2225023 2225271 . - 0 ID=cds-LNP58_RS10560;Parent=gene-LNP58_RS10560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2225271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975014.1;locus_tag=LNP58_RS10560;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2225549 2226514 . + . ID=gene-LNP58_RS10565;Name=LNP58_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10565;old_locus_tag=LNP58_10550 NZ_CP086372.1 Protein Homology CDS 2225549 2226514 . + 0 ID=cds-WP_109182036.1;Parent=gene-LNP58_RS10565;Dbxref=Genbank:WP_109182036.1;Name=WP_109182036.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS10565;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182036.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2226585 2226905 . + . ID=gene-LNP58_RS10570;Name=LNP58_RS10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10570;old_locus_tag=LNP58_10555;partial=true;pseudo=true;start_range=.,2226585 NZ_CP086372.1 Protein Homology CDS 2226585 2226905 . + 0 ID=cds-LNP58_RS10570;Parent=gene-LNP58_RS10570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156071.1;locus_tag=LNP58_RS10570;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,2226585;transl_table=11 NZ_CP086372.1 RefSeq gene 2227017 2229524 . + . ID=gene-LNP58_RS10575;Name=LNP58_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10575;old_locus_tag=LNP58_10560 NZ_CP086372.1 Protein Homology CDS 2227017 2229524 . + 0 ID=cds-WP_011260655.1;Parent=gene-LNP58_RS10575;Dbxref=Genbank:WP_011260655.1;Name=WP_011260655.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505094.1;locus_tag=LNP58_RS10575;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_011260655.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2229565 2229643 . - . ID=gene-LNP58_RS10580;Name=LNP58_RS10580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10580;old_locus_tag=LNP58_10565 NZ_CP086372.1 cmsearch ncRNA 2229565 2229643 . - . ID=rna-LNP58_RS10580;Parent=gene-LNP58_RS10580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10580;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2229565 2229643 . - . ID=exon-LNP58_RS10580-1;Parent=rna-LNP58_RS10580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10580;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2229703 2230161 . - . ID=gene-LNP58_RS10585;Name=LNP58_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10585;old_locus_tag=LNP58_10570 NZ_CP086372.1 Protein Homology CDS 2229703 2230161 . - 0 ID=cds-WP_012443823.1;Parent=gene-LNP58_RS10585;Dbxref=Genbank:WP_012443823.1;Name=WP_012443823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968357.1;locus_tag=LNP58_RS10585;product=hypothetical protein;protein_id=WP_012443823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2230583 2231395 . + . ID=gene-LNP58_RS10590;Name=LNP58_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10590;old_locus_tag=LNP58_10575 NZ_CP086372.1 Protein Homology CDS 2230583 2231395 . + 0 ID=cds-WP_011409682.1;Parent=gene-LNP58_RS10590;Dbxref=Genbank:WP_011409682.1;Name=WP_011409682.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409682.1;locus_tag=LNP58_RS10590;product=TatD family hydrolase;protein_id=WP_011409682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2231390 2231465 . - . ID=gene-LNP58_RS10595;Name=LNP58_RS10595;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10595;old_locus_tag=LNP58_10580 NZ_CP086372.1 cmsearch ncRNA 2231390 2231465 . - . ID=rna-LNP58_RS10595;Parent=gene-LNP58_RS10595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10595;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2231390 2231465 . - . ID=exon-LNP58_RS10595-1;Parent=rna-LNP58_RS10595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10595;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2231532 2231785 . - . ID=gene-LNP58_RS10600;Name=LNP58_RS10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10600;old_locus_tag=LNP58_10585;partial=true;pseudo=true;start_range=.,2231532 NZ_CP086372.1 Protein Homology CDS 2231532 2231785 . - 0 ID=cds-LNP58_RS10600;Parent=gene-LNP58_RS10600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848809.1;locus_tag=LNP58_RS10600;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2231532;transl_table=11 NZ_CP086372.1 RefSeq gene 2232265 2233152 . - . ID=gene-LNP58_RS10605;Name=LNP58_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10605;old_locus_tag=LNP58_10590 NZ_CP086372.1 Protein Homology CDS 2232265 2233152 . - 0 ID=cds-WP_011260651.1;Parent=gene-LNP58_RS10605;Dbxref=Genbank:WP_011260651.1;Name=WP_011260651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167667.1;locus_tag=LNP58_RS10605;product=LysR family transcriptional regulator;protein_id=WP_011260651.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2233249 2234535 . + . ID=gene-LNP58_RS10610;Name=LNP58_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10610;old_locus_tag=LNP58_10595 NZ_CP086372.1 Protein Homology CDS 2233249 2234535 . + 0 ID=cds-WP_041182322.1;Parent=gene-LNP58_RS10610;Dbxref=Genbank:WP_041182322.1;Name=WP_041182322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471612.1;locus_tag=LNP58_RS10610;product=MFS transporter;protein_id=WP_041182322.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2234600 2234973 . - . ID=gene-LNP58_RS10615;Name=LNP58_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10615;old_locus_tag=LNP58_10600;partial=true;pseudo=true;start_range=.,2234600 NZ_CP086372.1 Protein Homology CDS 2234600 2234973 . - 0 ID=cds-LNP58_RS10615;Parent=gene-LNP58_RS10615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160393.1;locus_tag=LNP58_RS10615;partial=true;product=MerR family transcriptional regulator;pseudo=true;start_range=.,2234600;transl_table=11 NZ_CP086372.1 RefSeq gene 2235429 2236310 . + . ID=gene-LNP58_RS10620;Name=LNP58_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10620;old_locus_tag=LNP58_10605 NZ_CP086372.1 Protein Homology CDS 2235429 2236310 . + 0 ID=cds-WP_011260648.1;Parent=gene-LNP58_RS10620;Dbxref=Genbank:WP_011260648.1;Name=WP_011260648.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920008.1;locus_tag=LNP58_RS10620;product=NAD-dependent protein deacetylase;protein_id=WP_011260648.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2236369 2237487 . + . ID=gene-LNP58_RS10625;Name=LNP58_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10625;old_locus_tag=LNP58_10610 NZ_CP086372.1 Protein Homology CDS 2236369 2237487 . + 0 ID=cds-WP_011260647.1;Parent=gene-LNP58_RS10625;Dbxref=Genbank:WP_011260647.1;Name=WP_011260647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302131.1;locus_tag=LNP58_RS10625;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_011260647.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2237525 2238403 . + . ID=gene-LNP58_RS10630;Name=LNP58_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10630;old_locus_tag=LNP58_10615 NZ_CP086372.1 Protein Homology CDS 2237525 2238403 . + 0 ID=cds-WP_011260646.1;Parent=gene-LNP58_RS10630;Dbxref=Genbank:WP_011260646.1;Name=WP_011260646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304345.1;locus_tag=LNP58_RS10630;product=NAD(P)-dependent oxidoreductase;protein_id=WP_011260646.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2238427 2238502 . - . ID=gene-LNP58_RS10635;Name=LNP58_RS10635;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10635;old_locus_tag=LNP58_10620 NZ_CP086372.1 cmsearch ncRNA 2238427 2238502 . - . ID=rna-LNP58_RS10635;Parent=gene-LNP58_RS10635;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10635;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2238427 2238502 . - . ID=exon-LNP58_RS10635-1;Parent=rna-LNP58_RS10635;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10635;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2238486 2238559 . + . ID=gene-LNP58_RS10640;Name=LNP58_RS10640;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10640;old_locus_tag=LNP58_10625 NZ_CP086372.1 cmsearch ncRNA 2238486 2238559 . + . ID=rna-LNP58_RS10640;Parent=gene-LNP58_RS10640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10640;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2238486 2238559 . + . ID=exon-LNP58_RS10640-1;Parent=rna-LNP58_RS10640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10640;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2238755 2239144 . + . ID=gene-LNP58_RS10645;Name=LNP58_RS10645;end_range=2239144,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10645;old_locus_tag=LNP58_10630;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2238755 2239144 . + 0 ID=cds-LNP58_RS10645;Parent=gene-LNP58_RS10645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2239144,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304344.1;locus_tag=LNP58_RS10645;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2239366 2240217 . + . ID=gene-LNP58_RS10650;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LNP58_RS10650;old_locus_tag=LNP58_10635 NZ_CP086372.1 Protein Homology CDS 2239366 2240217 . + 0 ID=cds-WP_011409678.1;Parent=gene-LNP58_RS10650;Dbxref=Genbank:WP_011409678.1;Name=WP_011409678.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237160.1;locus_tag=LNP58_RS10650;product=formyltetrahydrofolate deformylase;protein_id=WP_011409678.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2240296 2241003 . - . ID=gene-LNP58_RS10655;Name=LNP58_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10655;old_locus_tag=LNP58_10640 NZ_CP086372.1 Protein Homology CDS 2240296 2241003 . - 0 ID=cds-WP_011409677.1;Parent=gene-LNP58_RS10655;Dbxref=Genbank:WP_011409677.1;Name=WP_011409677.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505080.1;locus_tag=LNP58_RS10655;product=response regulator;protein_id=WP_011409677.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2241036 2241667 . - . ID=gene-LNP58_RS10660;Name=LNP58_RS10660;end_range=2241667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10660;old_locus_tag=LNP58_10645;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2241036 2241667 . - 0 ID=cds-LNP58_RS10660;Parent=gene-LNP58_RS10660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2241667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346030.1;locus_tag=LNP58_RS10660;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2241693 2242577 . - . ID=gene-LNP58_RS10665;Name=LNP58_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10665;old_locus_tag=LNP58_10650 NZ_CP086372.1 Protein Homology CDS 2241693 2242577 . - 0 ID=cds-WP_011409675.1;Parent=gene-LNP58_RS10665;Dbxref=Genbank:WP_011409675.1;Name=WP_011409675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574893.1;locus_tag=LNP58_RS10665;product=methylenetetrahydrofolate reductase;protein_id=WP_011409675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2242766 2242842 . + . ID=gene-LNP58_RS10670;Name=LNP58_RS10670;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10670;old_locus_tag=LNP58_10655 NZ_CP086372.1 cmsearch ncRNA 2242766 2242842 . + . ID=rna-LNP58_RS10670;Parent=gene-LNP58_RS10670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10670;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2242766 2242842 . + . ID=exon-LNP58_RS10670-1;Parent=rna-LNP58_RS10670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10670;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2242847 2243512 . - . ID=gene-LNP58_RS10675;Name=LNP58_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10675;old_locus_tag=LNP58_10660 NZ_CP086372.1 Protein Homology CDS 2242847 2243512 . - 0 ID=cds-WP_011260641.1;Parent=gene-LNP58_RS10675;Dbxref=Genbank:WP_011260641.1;Name=WP_011260641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346036.1;locus_tag=LNP58_RS10675;product=epoxyqueuosine reductase QueH;protein_id=WP_011260641.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2243512 2244426 . - . ID=gene-LNP58_RS10680;Name=LNP58_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10680;old_locus_tag=LNP58_10665 NZ_CP086372.1 Protein Homology CDS 2243512 2244426 . - 0 ID=cds-WP_011409674.1;Parent=gene-LNP58_RS10680;Dbxref=Genbank:WP_011409674.1;Name=WP_011409674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089083.1;locus_tag=LNP58_RS10680;product=LysR family transcriptional regulator;protein_id=WP_011409674.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2244617 2245210 . + . ID=gene-LNP58_RS10685;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=LNP58_RS10685;old_locus_tag=LNP58_10670 NZ_CP086372.1 Protein Homology CDS 2244617 2245210 . + 0 ID=cds-WP_011409673.1;Parent=gene-LNP58_RS10685;Dbxref=Genbank:WP_011409673.1;Name=WP_011409673.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574899.1;locus_tag=LNP58_RS10685;product=FMN reductase;protein_id=WP_011409673.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2245353 2246336 . + . ID=gene-LNP58_RS10690;Name=LNP58_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10690;old_locus_tag=LNP58_10675 NZ_CP086372.1 Protein Homology CDS 2245353 2246336 . + 0 ID=cds-WP_011409672.1;Parent=gene-LNP58_RS10690;Dbxref=Genbank:WP_011409672.1;Name=WP_011409672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089084.1;locus_tag=LNP58_RS10690;product=DUF1852 domain-containing protein;protein_id=WP_011409672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2246364 2247392 . + . ID=gene-LNP58_RS10695;Name=LNP58_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10695;old_locus_tag=LNP58_10680 NZ_CP086372.1 Protein Homology CDS 2246364 2247392 . + 0 ID=cds-WP_011260637.1;Parent=gene-LNP58_RS10695;Dbxref=Genbank:WP_011260637.1;Name=WP_011260637.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369054.1;locus_tag=LNP58_RS10695;product=methionine synthase;protein_id=WP_011260637.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2247599 2248555 . - . ID=gene-LNP58_RS10700;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=LNP58_RS10700;old_locus_tag=LNP58_10685 NZ_CP086372.1 Protein Homology CDS 2247599 2248555 . - 0 ID=cds-WP_011260636.1;Parent=gene-LNP58_RS10700;Dbxref=Genbank:WP_011260636.1;Name=WP_011260636.1;Ontology_term=GO:0046411,GO:0015649;gbkey=CDS;gene=kdgT;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260636.1;locus_tag=LNP58_RS10700;product=2-keto-3-deoxygluconate transporter;protein_id=WP_011260636.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2248704 2250156 . - . ID=gene-LNP58_RS10705;Name=LNP58_RS10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10705;old_locus_tag=LNP58_10690;pseudo=true NZ_CP086372.1 Protein Homology CDS 2248704 2250156 . - 0 ID=cds-LNP58_RS10705;Parent=gene-LNP58_RS10705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488991.1;locus_tag=LNP58_RS10705;product=OprO/OprP family phosphate-selective porin;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2250979 2251857 . - . ID=gene-LNP58_RS10710;Name=LNP58_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10710;old_locus_tag=LNP58_10695 NZ_CP086372.1 Protein Homology CDS 2250979 2251857 . - 0 ID=cds-WP_011409669.1;Parent=gene-LNP58_RS10710;Dbxref=Genbank:WP_011409669.1;Name=WP_011409669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409669.1;locus_tag=LNP58_RS10710;product=SDR family oxidoreductase;protein_id=WP_011409669.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2251993 2252424 . + . ID=gene-LNP58_RS10715;Name=LNP58_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10715;old_locus_tag=LNP58_10700 NZ_CP086372.1 Protein Homology CDS 2251993 2252424 . + 0 ID=cds-WP_011260634.1;Parent=gene-LNP58_RS10715;Dbxref=Genbank:WP_011260634.1;Name=WP_011260634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505072.1;locus_tag=LNP58_RS10715;product=helix-turn-helix domain-containing protein;protein_id=WP_011260634.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2252642 2253103 . - . ID=gene-LNP58_RS10720;Name=LNP58_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10720;old_locus_tag=LNP58_10705 NZ_CP086372.1 Protein Homology CDS 2252642 2253103 . - 0 ID=cds-WP_011409668.1;Parent=gene-LNP58_RS10720;Dbxref=Genbank:WP_011409668.1;Name=WP_011409668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153220.1;locus_tag=LNP58_RS10720;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_011409668.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2253181 2253474 . - . ID=gene-LNP58_RS10725;Name=LNP58_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10725;old_locus_tag=LNP58_10710 NZ_CP086372.1 Protein Homology CDS 2253181 2253474 . - 0 ID=cds-WP_027703432.1;Parent=gene-LNP58_RS10725;Dbxref=Genbank:WP_027703432.1;Name=WP_027703432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300601.1;locus_tag=LNP58_RS10725;product=hypothetical protein;protein_id=WP_027703432.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2253518 2254111 . - . ID=gene-LNP58_RS10730;Name=LNP58_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10730;old_locus_tag=LNP58_10715 NZ_CP086372.1 Protein Homology CDS 2253518 2254111 . - 0 ID=cds-WP_011260633.1;Parent=gene-LNP58_RS10730;Dbxref=Genbank:WP_011260633.1;Name=WP_011260633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260633.1;locus_tag=LNP58_RS10730;product=hypothetical protein;protein_id=WP_011260633.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2254108 2254872 . - . ID=gene-LNP58_RS10735;Name=LNP58_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10735;old_locus_tag=LNP58_10720 NZ_CP086372.1 Protein Homology CDS 2254108 2254872 . - 0 ID=cds-WP_228329591.1;Parent=gene-LNP58_RS10735;Dbxref=Genbank:WP_228329591.1;Name=WP_228329591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849294.1;locus_tag=LNP58_RS10735;product=hypothetical protein;protein_id=WP_228329591.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2255112 2255188 . + . ID=gene-LNP58_RS10740;Name=LNP58_RS10740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10740;old_locus_tag=LNP58_10725 NZ_CP086372.1 cmsearch ncRNA 2255112 2255188 . + . ID=rna-LNP58_RS10740;Parent=gene-LNP58_RS10740;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10740;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2255112 2255188 . + . ID=exon-LNP58_RS10740-1;Parent=rna-LNP58_RS10740;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10740;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2255272 2257632 . - . ID=gene-LNP58_RS10745;Name=LNP58_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10745;old_locus_tag=LNP58_10730 NZ_CP086372.1 Protein Homology CDS 2255272 2257632 . - 0 ID=cds-WP_012443849.1;Parent=gene-LNP58_RS10745;Dbxref=Genbank:WP_012443849.1;Name=WP_012443849.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809629.1;locus_tag=LNP58_RS10745;product=S9 family peptidase;protein_id=WP_012443849.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2258378 2259724 . + . ID=gene-LNP58_RS10750;Name=LNP58_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10750;old_locus_tag=LNP58_10735 NZ_CP086372.1 Protein Homology CDS 2258378 2259724 . + 0 ID=cds-WP_041182320.1;Parent=gene-LNP58_RS10750;Dbxref=Genbank:WP_041182320.1;Name=WP_041182320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303711.1;locus_tag=LNP58_RS10750;product=AMP-binding protein;protein_id=WP_041182320.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2260177 2261136 . + . ID=gene-LNP58_RS10755;Name=LNP58_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10755;old_locus_tag=LNP58_10740 NZ_CP086372.1 Protein Homology CDS 2260177 2261136 . + 0 ID=cds-WP_011409666.1;Parent=gene-LNP58_RS10755;Dbxref=Genbank:WP_011409666.1;Name=WP_011409666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501625.1;locus_tag=LNP58_RS10755;product=5'-nucleotidase;protein_id=WP_011409666.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2261382 2262389 . - . ID=gene-LNP58_RS10760;Name=LNP58_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10760;old_locus_tag=LNP58_10745 NZ_CP086372.1 Protein Homology CDS 2261382 2262389 . - 0 ID=cds-WP_011409665.1;Parent=gene-LNP58_RS10760;Dbxref=Genbank:WP_011409665.1;Name=WP_011409665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487396.1;locus_tag=LNP58_RS10760;product=pteridine-dependent deoxygenase like protein;protein_id=WP_011409665.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2262386 2263735 . - . ID=gene-LNP58_RS10765;Name=LNP58_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10765;old_locus_tag=LNP58_10750 NZ_CP086372.1 Protein Homology CDS 2262386 2263735 . - 0 ID=cds-WP_011409664.1;Parent=gene-LNP58_RS10765;Dbxref=Genbank:WP_011409664.1;Name=WP_011409664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117708.1;locus_tag=LNP58_RS10765;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011409664.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2264038 2264307 . + . ID=gene-LNP58_RS10770;Name=xanC;gbkey=Gene;gene=xanC;gene_biotype=protein_coding;locus_tag=LNP58_RS10770;old_locus_tag=LNP58_10755 NZ_CP086372.1 Protein Homology CDS 2264038 2264307 . + 0 ID=cds-WP_011260626.1;Parent=gene-LNP58_RS10770;Dbxref=Genbank:WP_011260626.1;Name=WP_011260626.1;gbkey=CDS;gene=xanC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300738.1;locus_tag=LNP58_RS10770;product=xanthomonadin biosynthesis acyl carrier protein XanC;protein_id=WP_011260626.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2264345 2265028 . + . ID=gene-LNP58_RS10775;Name=LNP58_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10775;old_locus_tag=LNP58_10760 NZ_CP086372.1 Protein Homology CDS 2264345 2265028 . + 0 ID=cds-WP_080493953.1;Parent=gene-LNP58_RS10775;Dbxref=Genbank:WP_080493953.1;Name=WP_080493953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443853.1;locus_tag=LNP58_RS10775;product=ketosynthase;protein_id=WP_080493953.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2265082 2265831 . + . ID=gene-LNP58_RS10780;Name=LNP58_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10780;old_locus_tag=LNP58_10765 NZ_CP086372.1 Protein Homology CDS 2265082 2265831 . + 0 ID=cds-WP_011409662.1;Parent=gene-LNP58_RS10780;Dbxref=Genbank:WP_011409662.1;Name=WP_011409662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348972.1;locus_tag=LNP58_RS10780;product=lysophospholipid acyltransferase family protein;protein_id=WP_011409662.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2265903 2266130 . + . ID=gene-LNP58_RS10785;Name=LNP58_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10785;old_locus_tag=LNP58_10770 NZ_CP086372.1 Protein Homology CDS 2265903 2266130 . + 0 ID=cds-WP_228329590.1;Parent=gene-LNP58_RS10785;Dbxref=Genbank:WP_228329590.1;Name=WP_228329590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300741.1;locus_tag=LNP58_RS10785;product=hypothetical protein;protein_id=WP_228329590.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2266127 2267101 . + . ID=gene-LNP58_RS10790;Name=LNP58_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10790;old_locus_tag=LNP58_10775 NZ_CP086372.1 Protein Homology CDS 2266127 2267101 . + 0 ID=cds-WP_011260623.1;Parent=gene-LNP58_RS10790;Dbxref=Genbank:WP_011260623.1;Name=WP_011260623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260623.1;locus_tag=LNP58_RS10790;product=acyltransferase;protein_id=WP_011260623.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2267052 2267672 . + . ID=gene-LNP58_RS10795;Name=LNP58_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10795;old_locus_tag=LNP58_10780 NZ_CP086372.1 Protein Homology CDS 2267052 2267672 . + 0 ID=cds-WP_171970836.1;Parent=gene-LNP58_RS10795;Dbxref=Genbank:WP_171970836.1;Name=WP_171970836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994991.1;locus_tag=LNP58_RS10795;product=fatty acyl CoA synthetase;protein_id=WP_171970836.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2267811 2270180 . + . ID=gene-LNP58_RS10800;Name=LNP58_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10800;old_locus_tag=LNP58_10785 NZ_CP086372.1 Protein Homology CDS 2267811 2270180 . + 0 ID=cds-WP_042465789.1;Parent=gene-LNP58_RS10800;Dbxref=Genbank:WP_042465789.1;Name=WP_042465789.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926484.1;locus_tag=LNP58_RS10800;product=MMPL family transporter;protein_id=WP_042465789.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2270167 2270604 . + . ID=gene-LNP58_RS10805;Name=LNP58_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10805;old_locus_tag=LNP58_10790 NZ_CP086372.1 Protein Homology CDS 2270167 2270604 . + 0 ID=cds-WP_011409659.1;Parent=gene-LNP58_RS10805;Dbxref=Genbank:WP_011409659.1;Name=WP_011409659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850216.1;locus_tag=LNP58_RS10805;product=phosphotransferase;protein_id=WP_011409659.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2270719 2270795 . + . ID=gene-LNP58_RS10810;Name=LNP58_RS10810;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10810;old_locus_tag=LNP58_10795 NZ_CP086372.1 cmsearch ncRNA 2270719 2270795 . + . ID=rna-LNP58_RS10810;Parent=gene-LNP58_RS10810;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10810;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2270719 2270795 . + . ID=exon-LNP58_RS10810-1;Parent=rna-LNP58_RS10810;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10810;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2270858 2271890 . + . ID=gene-LNP58_RS10815;Name=LNP58_RS10815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10815;old_locus_tag=LNP58_10800;pseudo=true NZ_CP086372.1 Protein Homology CDS 2270858 2271890 . + 0 ID=cds-LNP58_RS10815;Parent=gene-LNP58_RS10815;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=LNP58_RS10815;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2271940 2275797 . - . ID=gene-LNP58_RS10820;Name=LNP58_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10820;old_locus_tag=LNP58_10805 NZ_CP086372.1 Protein Homology CDS 2271940 2275797 . - 0 ID=cds-WP_012443859.1;Parent=gene-LNP58_RS10820;Dbxref=Genbank:WP_012443859.1;Name=WP_012443859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156059.1;locus_tag=LNP58_RS10820;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_012443859.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2275794 2277575 . - . ID=gene-LNP58_RS10825;Name=LNP58_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10825;old_locus_tag=LNP58_10810 NZ_CP086372.1 Protein Homology CDS 2275794 2277575 . - 0 ID=cds-WP_011409656.1;Parent=gene-LNP58_RS10825;Dbxref=Genbank:WP_011409656.1;Name=WP_011409656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349065.1;locus_tag=LNP58_RS10825;product=autotransporter assembly complex protein TamA;protein_id=WP_011409656.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2277664 2277771 . + . ID=gene-LNP58_RS10830;Name=LNP58_RS10830;end_range=2277771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10830;old_locus_tag=LNP58_10815;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2277664 2277771 . + 0 ID=cds-LNP58_RS10830;Parent=gene-LNP58_RS10830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2277771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS10830;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2277890 2279266 . + . ID=gene-LNP58_RS10835;Name=LNP58_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10835;old_locus_tag=LNP58_10820 NZ_CP086372.1 Protein Homology CDS 2277890 2279266 . + 0 ID=cds-WP_228329749.1;Parent=gene-LNP58_RS10835;Dbxref=Genbank:WP_228329749.1;Name=WP_228329749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS10835;product=IS5-like element ISXo4 family transposase;protein_id=WP_228329749.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2279387 2280486 . + . ID=gene-LNP58_RS10840;Name=LNP58_RS10840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10840;old_locus_tag=LNP58_10825;pseudo=true NZ_CP086372.1 Protein Homology CDS 2279387 2280486 . + 0 ID=cds-LNP58_RS10840;Parent=gene-LNP58_RS10840;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS10840;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2280709 2282598 . - . ID=gene-LNP58_RS10845;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LNP58_RS10845;old_locus_tag=LNP58_10830 NZ_CP086372.1 Protein Homology CDS 2280709 2282598 . - 0 ID=cds-WP_012443863.1;Parent=gene-LNP58_RS10845;Dbxref=Genbank:WP_012443863.1;Name=WP_012443863.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171708.1;locus_tag=LNP58_RS10845;product=transcription termination factor Rho;protein_id=WP_012443863.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2282815 2283156 . - . ID=gene-LNP58_RS10850;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LNP58_RS10850;old_locus_tag=LNP58_10835 NZ_CP086372.1 Protein Homology CDS 2282815 2283156 . - 0 ID=cds-WP_011260615.1;Parent=gene-LNP58_RS10850;Dbxref=Genbank:WP_011260615.1;Name=WP_011260615.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159364.1;locus_tag=LNP58_RS10850;product=thioredoxin TrxA;protein_id=WP_011260615.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2283355 2285079 . + . ID=gene-LNP58_RS10855;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LNP58_RS10855;old_locus_tag=LNP58_10840 NZ_CP086372.1 Protein Homology CDS 2283355 2285079 . + 0 ID=cds-WP_011260614.1;Parent=gene-LNP58_RS10855;Dbxref=Genbank:WP_011260614.1;Name=WP_011260614.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157031.1;locus_tag=LNP58_RS10855;product=ATP-dependent RNA helicase RhlB;protein_id=WP_011260614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2285155 2285841 . + . ID=gene-LNP58_RS10860;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LNP58_RS10860;old_locus_tag=LNP58_10845 NZ_CP086372.1 Protein Homology CDS 2285155 2285841 . + 0 ID=cds-WP_011409654.1;Parent=gene-LNP58_RS10860;Dbxref=Genbank:WP_011409654.1;Name=WP_011409654.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1;locus_tag=LNP58_RS10860;product=cell division ATP-binding protein FtsE;protein_id=WP_011409654.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2285838 2286788 . + . ID=gene-LNP58_RS10865;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LNP58_RS10865;old_locus_tag=LNP58_10850 NZ_CP086372.1 Protein Homology CDS 2285838 2286788 . + 0 ID=cds-WP_011260612.1;Parent=gene-LNP58_RS10865;Dbxref=Genbank:WP_011260612.1;Name=WP_011260612.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1;locus_tag=LNP58_RS10865;product=permease-like cell division protein FtsX;protein_id=WP_011260612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2286797 2287639 . + . ID=gene-LNP58_RS10870;Name=LNP58_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10870;old_locus_tag=LNP58_10855 NZ_CP086372.1 Protein Homology CDS 2286797 2287639 . + 0 ID=cds-WP_011409653.1;Parent=gene-LNP58_RS10870;Dbxref=Genbank:WP_011409653.1;Name=WP_011409653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903686.1;locus_tag=LNP58_RS10870;product=response regulator;protein_id=WP_011409653.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2287636 2288361 . + . ID=gene-LNP58_RS10875;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LNP58_RS10875;old_locus_tag=LNP58_10860 NZ_CP086372.1 Protein Homology CDS 2287636 2288361 . + 0 ID=cds-WP_011260610.1;Parent=gene-LNP58_RS10875;Dbxref=Genbank:WP_011260610.1;Name=WP_011260610.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157034.1;locus_tag=LNP58_RS10875;product=uracil-DNA glycosylase;protein_id=WP_011260610.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2288560 2289435 . + . ID=gene-LNP58_RS10880;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LNP58_RS10880;old_locus_tag=LNP58_10865 NZ_CP086372.1 Protein Homology CDS 2288560 2289435 . + 0 ID=cds-WP_010370120.1;Parent=gene-LNP58_RS10880;Dbxref=Genbank:WP_010370120.1;Name=WP_010370120.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1;locus_tag=LNP58_RS10880;product=RNA polymerase sigma factor RpoH;protein_id=WP_010370120.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2289517 2290129 . - . ID=gene-LNP58_RS10885;Name=LNP58_RS10885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10885;old_locus_tag=LNP58_10870;partial=true;pseudo=true;start_range=.,2289517 NZ_CP086372.1 Protein Homology CDS 2289517 2290129 . - 0 ID=cds-LNP58_RS10885;Parent=gene-LNP58_RS10885;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017913975.1;locus_tag=LNP58_RS10885;partial=true;product=trimeric intracellular cation channel family protein;pseudo=true;start_range=.,2289517;transl_table=11 NZ_CP086372.1 RefSeq gene 2290179 2291471 . - . ID=gene-LNP58_RS10890;Name=LNP58_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10890;old_locus_tag=LNP58_10875 NZ_CP086372.1 Protein Homology CDS 2290179 2291471 . - 0 ID=cds-WP_041182316.1;Parent=gene-LNP58_RS10890;Dbxref=Genbank:WP_041182316.1;Name=WP_041182316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157036.1;locus_tag=LNP58_RS10890;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_041182316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2291619 2291783 . + . ID=gene-LNP58_RS10895;Name=LNP58_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10895;old_locus_tag=LNP58_10880 NZ_CP086372.1 GeneMarkS-2+ CDS 2291619 2291783 . + 0 ID=cds-WP_155296186.1;Parent=gene-LNP58_RS10895;Dbxref=Genbank:WP_155296186.1;Name=WP_155296186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS10895;product=hypothetical protein;protein_id=WP_155296186.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2291829 2292140 . + . ID=gene-LNP58_RS10900;Name=LNP58_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10900;old_locus_tag=LNP58_10885 NZ_CP086372.1 Protein Homology CDS 2291829 2292140 . + 0 ID=cds-WP_075242340.1;Parent=gene-LNP58_RS10900;Dbxref=Genbank:WP_075242340.1;Name=WP_075242340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260606.1;locus_tag=LNP58_RS10900;product=hypothetical protein;protein_id=WP_075242340.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2292137 2292961 . + . ID=gene-LNP58_RS10905;Name=LNP58_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10905;old_locus_tag=LNP58_10890 NZ_CP086372.1 Protein Homology CDS 2292137 2292961 . + 0 ID=cds-WP_011260605.1;Parent=gene-LNP58_RS10905;Dbxref=Genbank:WP_011260605.1;Name=WP_011260605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463668.1;locus_tag=LNP58_RS10905;product=NYN domain-containing protein;protein_id=WP_011260605.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2293020 2293612 . + . ID=gene-LNP58_RS10910;Name=LNP58_RS10910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10910;old_locus_tag=LNP58_10895;partial=true;pseudo=true;start_range=.,2293020 NZ_CP086372.1 Protein Homology CDS 2293020 2293612 . + 0 ID=cds-LNP58_RS10910;Parent=gene-LNP58_RS10910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS10910;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,2293020;transl_table=11 NZ_CP086372.1 RefSeq gene 2294010 2294297 . + . ID=gene-LNP58_RS10915;Name=LNP58_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10915;old_locus_tag=LNP58_10900 NZ_CP086372.1 Protein Homology CDS 2294010 2294297 . + 0 ID=cds-WP_003483210.1;Parent=gene-LNP58_RS10915;Dbxref=Genbank:WP_003483210.1;Name=WP_003483210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1;locus_tag=LNP58_RS10915;product=co-chaperone GroES;protein_id=WP_003483210.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2294434 2296074 . + . ID=gene-LNP58_RS10920;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LNP58_RS10920;old_locus_tag=LNP58_10905 NZ_CP086372.1 Protein Homology CDS 2294434 2296074 . + 0 ID=cds-WP_011260602.1;Parent=gene-LNP58_RS10920;Dbxref=Genbank:WP_011260602.1;Name=WP_011260602.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=LNP58_RS10920;product=chaperonin GroEL;protein_id=WP_011260602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2296375 2298483 . - . ID=gene-LNP58_RS10925;Name=LNP58_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10925;old_locus_tag=LNP58_10910 NZ_CP086372.1 Protein Homology CDS 2296375 2298483 . - 0 ID=cds-WP_069963910.1;Parent=gene-LNP58_RS10925;Dbxref=Genbank:WP_069963910.1;Name=WP_069963910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260601.1;locus_tag=LNP58_RS10925;product=XopX family type III secretion system effector;protein_id=WP_069963910.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2298859 2301648 . + . ID=gene-LNP58_RS10930;Name=LNP58_RS10930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10930;old_locus_tag=LNP58_10915;pseudo=true NZ_CP086372.1 Protein Homology CDS 2298859 2301648 . + 0 ID=cds-LNP58_RS10930;Parent=gene-LNP58_RS10930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237029.1;locus_tag=LNP58_RS10930;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2301653 2301729 . - . ID=gene-LNP58_RS10935;Name=LNP58_RS10935;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS10935;old_locus_tag=LNP58_10920 NZ_CP086372.1 cmsearch ncRNA 2301653 2301729 . - . ID=rna-LNP58_RS10935;Parent=gene-LNP58_RS10935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10935;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2301653 2301729 . - . ID=exon-LNP58_RS10935-1;Parent=rna-LNP58_RS10935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS10935;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2302524 2303597 . + . ID=gene-LNP58_RS10940;Name=LNP58_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10940;old_locus_tag=LNP58_10925 NZ_CP086372.1 Protein Homology CDS 2302524 2303597 . + 0 ID=cds-WP_011260598.1;Parent=gene-LNP58_RS10940;Dbxref=Genbank:WP_011260598.1;Name=WP_011260598.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089228.1;locus_tag=LNP58_RS10940;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_011260598.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2304185 2305560 . + . ID=gene-LNP58_RS10945;Name=LNP58_RS10945;end_range=2305560,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10945;old_locus_tag=LNP58_10930;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2304185 2305560 . + 0 ID=cds-LNP58_RS10945;Parent=gene-LNP58_RS10945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2305560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=LNP58_RS10945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2305567 2306532 . - . ID=gene-LNP58_RS10950;Name=LNP58_RS10950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10950;old_locus_tag=LNP58_10935;pseudo=true NZ_CP086372.1 Protein Homology CDS 2305567 2306532 . - 0 ID=cds-LNP58_RS10950;Parent=gene-LNP58_RS10950;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS10950;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2306621 2307427 . + . ID=gene-LNP58_RS10955;Name=LNP58_RS10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10955;old_locus_tag=LNP58_10940;partial=true;pseudo=true;start_range=.,2306621 NZ_CP086372.1 Protein Homology CDS 2306621 2307427 . + 0 ID=cds-LNP58_RS10955;Parent=gene-LNP58_RS10955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=LNP58_RS10955;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2306621;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2307521 2309185 . + . ID=gene-LNP58_RS10960;Name=LNP58_RS10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10960;old_locus_tag=LNP58_10945;pseudo=true NZ_CP086372.1 Protein Homology CDS 2307521 2309185 . + 0 ID=cds-LNP58_RS10960;Parent=gene-LNP58_RS10960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160243.1;locus_tag=LNP58_RS10960;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2309452 2310372 . - . ID=gene-LNP58_RS10965;Name=LNP58_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10965;old_locus_tag=LNP58_10950 NZ_CP086372.1 Protein Homology CDS 2309452 2310372 . - 0 ID=cds-WP_011409642.1;Parent=gene-LNP58_RS10965;Dbxref=Genbank:WP_011409642.1;Name=WP_011409642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929371.1;locus_tag=LNP58_RS10965;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_011409642.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2310372 2310890 . - . ID=gene-LNP58_RS10970;Name=LNP58_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10970;old_locus_tag=LNP58_10955 NZ_CP086372.1 Protein Homology CDS 2310372 2310890 . - 0 ID=cds-WP_011260589.1;Parent=gene-LNP58_RS10970;Dbxref=Genbank:WP_011260589.1;Name=WP_011260589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929373.1;locus_tag=LNP58_RS10970;product=hypothetical protein;protein_id=WP_011260589.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2311052 2313877 . + . ID=gene-LNP58_RS10975;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LNP58_RS10975;old_locus_tag=LNP58_10960 NZ_CP086372.1 Protein Homology CDS 2311052 2313877 . + 0 ID=cds-WP_011409641.1;Parent=gene-LNP58_RS10975;Dbxref=Genbank:WP_011409641.1;Name=WP_011409641.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929375.1;locus_tag=LNP58_RS10975;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_011409641.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2313973 2314533 . - . ID=gene-LNP58_RS10980;Name=LNP58_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10980;old_locus_tag=LNP58_10965 NZ_CP086372.1 Protein Homology CDS 2313973 2314533 . - 0 ID=cds-WP_011409640.1;Parent=gene-LNP58_RS10980;Dbxref=Genbank:WP_011409640.1;Name=WP_011409640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409640.1;locus_tag=LNP58_RS10980;product=VUT family protein;protein_id=WP_011409640.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2315569 2317523 . + . ID=gene-LNP58_RS10985;Name=LNP58_RS10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS10985;old_locus_tag=LNP58_10970;pseudo=true NZ_CP086372.1 Protein Homology CDS 2315569 2317523 . + 0 ID=cds-LNP58_RS10985;Parent=gene-LNP58_RS10985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050384.1;locus_tag=LNP58_RS10985;product=S53 family peptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2317632 2318132 . - . ID=gene-LNP58_RS10990;Name=LNP58_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10990;old_locus_tag=LNP58_10975 NZ_CP086372.1 Protein Homology CDS 2317632 2318132 . - 0 ID=cds-WP_011409636.1;Parent=gene-LNP58_RS10990;Dbxref=Genbank:WP_011409636.1;Name=WP_011409636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409636.1;locus_tag=LNP58_RS10990;product=hypothetical protein;protein_id=WP_011409636.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2318129 2318962 . - . ID=gene-LNP58_RS10995;Name=LNP58_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS10995;old_locus_tag=LNP58_10980 NZ_CP086372.1 Protein Homology CDS 2318129 2318962 . - 0 ID=cds-WP_228329730.1;Parent=gene-LNP58_RS10995;Dbxref=Genbank:WP_228329730.1;Name=WP_228329730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577092.1;locus_tag=LNP58_RS10995;product=DUF2145 domain-containing protein;protein_id=WP_228329730.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2319028 2319975 . - . ID=gene-LNP58_RS11000;Name=LNP58_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11000;old_locus_tag=LNP58_10985 NZ_CP086372.1 Protein Homology CDS 2319028 2319975 . - 0 ID=cds-WP_069964645.1;Parent=gene-LNP58_RS11000;Dbxref=Genbank:WP_069964645.1;Name=WP_069964645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260582.1;locus_tag=LNP58_RS11000;product=ELM1/GtrOC1 family putative glycosyltransferase;protein_id=WP_069964645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2320109 2320699 . + . ID=gene-LNP58_RS11005;Name=LNP58_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11005;old_locus_tag=LNP58_10990 NZ_CP086372.1 Protein Homology CDS 2320109 2320699 . + 0 ID=cds-WP_011260581.1;Parent=gene-LNP58_RS11005;Dbxref=Genbank:WP_011260581.1;Name=WP_011260581.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914114.1;locus_tag=LNP58_RS11005;product=malonic semialdehyde reductase;protein_id=WP_011260581.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2320910 2321668 . + . ID=gene-LNP58_RS11010;Name=LNP58_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11010;old_locus_tag=LNP58_10995 NZ_CP086372.1 Protein Homology CDS 2320910 2321668 . + 0 ID=cds-WP_075242263.1;Parent=gene-LNP58_RS11010;Dbxref=Genbank:WP_075242263.1;Name=WP_075242263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929381.1;locus_tag=LNP58_RS11010;product=YceI family protein;protein_id=WP_075242263.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2321884 2322059 . - . ID=gene-LNP58_RS11015;Name=LNP58_RS11015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11015;old_locus_tag=LNP58_11000;partial=true;pseudo=true;start_range=.,2321884 NZ_CP086372.1 Protein Homology CDS 2321884 2322059 . - 0 ID=cds-LNP58_RS11015;Parent=gene-LNP58_RS11015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155893.1;locus_tag=LNP58_RS11015;partial=true;product=HAD family hydrolase;pseudo=true;start_range=.,2321884;transl_table=11 NZ_CP086372.1 RefSeq gene 2322154 2322573 . - . ID=gene-LNP58_RS11020;Name=LNP58_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11020;old_locus_tag=LNP58_11005 NZ_CP086372.1 Protein Homology CDS 2322154 2322573 . - 0 ID=cds-WP_011260579.1;Parent=gene-LNP58_RS11020;Dbxref=Genbank:WP_011260579.1;Name=WP_011260579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483275.1;locus_tag=LNP58_RS11020;product=STAS domain-containing protein;protein_id=WP_011260579.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2322570 2323001 . - . ID=gene-LNP58_RS11025;Name=LNP58_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11025;old_locus_tag=LNP58_11010 NZ_CP086372.1 Protein Homology CDS 2322570 2323001 . - 0 ID=cds-WP_012443890.1;Parent=gene-LNP58_RS11025;Dbxref=Genbank:WP_012443890.1;Name=WP_012443890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917392.1;locus_tag=LNP58_RS11025;product=ATP-binding protein;protein_id=WP_012443890.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2322998 2325004 . - . ID=gene-LNP58_RS11030;Name=LNP58_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11030;old_locus_tag=LNP58_11015 NZ_CP086372.1 Protein Homology CDS 2322998 2325004 . - 0 ID=cds-WP_011409630.1;Parent=gene-LNP58_RS11030;Dbxref=Genbank:WP_011409630.1;Name=WP_011409630.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260578.1;locus_tag=LNP58_RS11030;product=SpoIIE family protein phosphatase;protein_id=WP_011409630.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2325222 2325692 . + . ID=gene-LNP58_RS11035;Name=LNP58_RS11035;end_range=2325692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11035;old_locus_tag=LNP58_11020;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2325222 2325692 . + 0 ID=cds-LNP58_RS11035;Parent=gene-LNP58_RS11035;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2325692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155889.1;locus_tag=LNP58_RS11035;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2325769 2326527 . + . ID=gene-LNP58_RS11040;Name=LNP58_RS11040;end_range=2326527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11040;old_locus_tag=LNP58_11025;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2325769 2326527 . + 0 ID=cds-LNP58_RS11040;Parent=gene-LNP58_RS11040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2326527,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_085938460.1;locus_tag=LNP58_RS11040;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 cmsearch sequence_feature 2326036 2326152 . + . ID=id-LNP58_RS11040;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11040;pseudo=true NZ_CP086372.1 RefSeq pseudogene 2326549 2327925 . - . ID=gene-LNP58_RS11045;Name=LNP58_RS11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11045;old_locus_tag=LNP58_11030;pseudo=true NZ_CP086372.1 Protein Homology CDS 2326549 2327925 . - 0 ID=cds-LNP58_RS11045;Parent=gene-LNP58_RS11045;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS11045;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2328073 2328213 . + . ID=gene-LNP58_RS11050;Name=LNP58_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11050;old_locus_tag=LNP58_11035 NZ_CP086372.1 GeneMarkS-2+ CDS 2328073 2328213 . + 0 ID=cds-WP_155296185.1;Parent=gene-LNP58_RS11050;Dbxref=Genbank:WP_155296185.1;Name=WP_155296185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11050;product=hypothetical protein;protein_id=WP_155296185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2328279 2332208 . - . ID=gene-LNP58_RS11055;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS11055;old_locus_tag=LNP58_11040 NZ_CP086372.1 Protein Homology CDS 2328279 2332208 . - 0 ID=cds-WP_228329729.1;Parent=gene-LNP58_RS11055;Dbxref=Genbank:WP_228329729.1;Name=WP_228329729.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS11055;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329729.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2332475 2333625 . + . ID=gene-LNP58_RS11060;Name=LNP58_RS11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11060;old_locus_tag=LNP58_11045;partial=true;pseudo=true;start_range=.,2332475 NZ_CP086372.1 Protein Homology CDS 2332475 2333625 . + 0 ID=cds-LNP58_RS11060;Parent=gene-LNP58_RS11060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158927.1;locus_tag=LNP58_RS11060;partial=true;product=lipase;pseudo=true;start_range=.,2332475;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2334048 2335046 . + . ID=gene-LNP58_RS11065;Name=LNP58_RS11065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11065;old_locus_tag=LNP58_11050;pseudo=true NZ_CP086372.1 Protein Homology CDS 2334048 2335046 . + 0 ID=cds-LNP58_RS11065;Parent=gene-LNP58_RS11065;Note=frameshifted;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962641.1;locus_tag=LNP58_RS11065;product=glycosyl hydrolase 53 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2335530 2338217 . + . ID=gene-LNP58_RS11070;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LNP58_RS11070;old_locus_tag=LNP58_11055 NZ_CP086372.1 Protein Homology CDS 2335530 2338217 . + 0 ID=cds-WP_014504812.1;Parent=gene-LNP58_RS11070;Dbxref=Genbank:WP_014504812.1;Name=WP_014504812.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1;locus_tag=LNP58_RS11070;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_014504812.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2338407 2339312 . + . ID=gene-LNP58_RS11075;Name=LNP58_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11075;old_locus_tag=LNP58_11060 NZ_CP086372.1 GeneMarkS-2+ CDS 2338407 2339312 . + 0 ID=cds-WP_128415341.1;Parent=gene-LNP58_RS11075;Dbxref=Genbank:WP_128415341.1;Name=WP_128415341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11075;product=hypothetical protein;protein_id=WP_128415341.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2339309 2340043 . + . ID=gene-LNP58_RS11080;Name=LNP58_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11080;old_locus_tag=LNP58_11065 NZ_CP086372.1 GeneMarkS-2+ CDS 2339309 2340043 . + 0 ID=cds-WP_011409620.1;Parent=gene-LNP58_RS11080;Dbxref=Genbank:WP_011409620.1;Name=WP_011409620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11080;product=HIRAN domain-containing protein;protein_id=WP_011409620.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2340209 2341250 . + . ID=gene-LNP58_RS11085;Name=LNP58_RS11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11085;old_locus_tag=LNP58_11070;pseudo=true NZ_CP086372.1 Protein Homology CDS 2340209 2341250 . + 0 ID=cds-LNP58_RS11085;Parent=gene-LNP58_RS11085;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS11085;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2341608 2341898 . - . ID=gene-LNP58_RS11090;Name=LNP58_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11090;old_locus_tag=LNP58_11075 NZ_CP086372.1 Protein Homology CDS 2341608 2341898 . - 0 ID=cds-WP_069964620.1;Parent=gene-LNP58_RS11090;Dbxref=Genbank:WP_069964620.1;Name=WP_069964620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914773.1;locus_tag=LNP58_RS11090;product=DUF2782 domain-containing protein;protein_id=WP_069964620.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2341975 2344776 . + . ID=gene-LNP58_RS11095;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LNP58_RS11095;old_locus_tag=LNP58_11080 NZ_CP086372.1 Protein Homology CDS 2341975 2344776 . + 0 ID=cds-WP_044756337.1;Parent=gene-LNP58_RS11095;Dbxref=Genbank:WP_044756337.1;Name=WP_044756337.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159421.1;locus_tag=LNP58_RS11095;product=DNA polymerase I;protein_id=WP_044756337.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2345724 2346623 . - . ID=gene-LNP58_RS11100;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LNP58_RS11100;old_locus_tag=LNP58_11085 NZ_CP086372.1 Protein Homology CDS 2345724 2346623 . - 0 ID=cds-WP_011260560.1;Parent=gene-LNP58_RS11100;Dbxref=Genbank:WP_011260560.1;Name=WP_011260560.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967076.1;locus_tag=LNP58_RS11100;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_011260560.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2346966 2347679 . + . ID=gene-LNP58_RS11105;Name=LNP58_RS11105;end_range=2347679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11105;old_locus_tag=LNP58_11090;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2346966 2347679 . + 0 ID=cds-LNP58_RS11105;Parent=gene-LNP58_RS11105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2347679,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260016.1;locus_tag=LNP58_RS11105;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2347744 2348724 . + . ID=gene-LNP58_RS11110;Name=LNP58_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11110;old_locus_tag=LNP58_11095 NZ_CP086372.1 Protein Homology CDS 2347744 2348724 . + 0 ID=cds-WP_069964619.1;Parent=gene-LNP58_RS11110;Dbxref=Genbank:WP_069964619.1;Name=WP_069964619.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS11110;product=IS5 family transposase;protein_id=WP_069964619.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2349341 2349517 . + . ID=gene-LNP58_RS11115;Name=LNP58_RS11115;end_range=2349517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11115;old_locus_tag=LNP58_11100;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2349341 2349517 . + 0 ID=cds-LNP58_RS11115;Parent=gene-LNP58_RS11115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074,GO:0003677;end_range=2349517,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994023.1;locus_tag=LNP58_RS11115;partial=true;product=phage integrase N-terminal SAM-like domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2349603 2350838 . + . ID=gene-LNP58_RS11120;Name=LNP58_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11120;old_locus_tag=LNP58_11105 NZ_CP086372.1 Protein Homology CDS 2349603 2350838 . + 0 ID=cds-WP_228329728.1;Parent=gene-LNP58_RS11120;Dbxref=Genbank:WP_228329728.1;Name=WP_228329728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS11120;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_228329728.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2350865 2352240 . - . ID=gene-LNP58_RS11125;Name=LNP58_RS11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11125;old_locus_tag=LNP58_11110;pseudo=true NZ_CP086372.1 Protein Homology CDS 2350865 2352240 . - 0 ID=cds-LNP58_RS11125;Parent=gene-LNP58_RS11125;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS11125;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2352324 2353199 . + . ID=gene-LNP58_RS11130;Name=LNP58_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11130;old_locus_tag=LNP58_11115 NZ_CP086372.1 Protein Homology CDS 2352324 2353199 . + 0 ID=cds-WP_011260557.1;Parent=gene-LNP58_RS11130;Dbxref=Genbank:WP_011260557.1;Name=WP_011260557.1;Ontology_term=GO:0006310,GO:0009294,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA,DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300598.1;locus_tag=LNP58_RS11130;product=integron integrase;protein_id=WP_011260557.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2353430 2355268 . - . ID=gene-LNP58_RS11135;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LNP58_RS11135;old_locus_tag=LNP58_11120 NZ_CP086372.1 Protein Homology CDS 2353430 2355268 . - 0 ID=cds-WP_011260556.1;Parent=gene-LNP58_RS11135;Dbxref=Genbank:WP_011260556.1;Name=WP_011260556.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437115.1;locus_tag=LNP58_RS11135;product=dihydroxy-acid dehydratase;protein_id=WP_011260556.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2355443 2355709 . + . ID=gene-LNP58_RS11140;Name=LNP58_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11140;old_locus_tag=LNP58_11125 NZ_CP086372.1 Protein Homology CDS 2355443 2355709 . + 0 ID=cds-WP_011409612.1;Parent=gene-LNP58_RS11140;Dbxref=Genbank:WP_011409612.1;Name=WP_011409612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035600.1;locus_tag=LNP58_RS11140;product=proteinase inhibitor;protein_id=WP_011409612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2355735 2356280 . - . ID=gene-LNP58_RS11145;Name=LNP58_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11145;old_locus_tag=LNP58_11130 NZ_CP086372.1 Protein Homology CDS 2355735 2356280 . - 0 ID=cds-WP_011409611.1;Parent=gene-LNP58_RS11145;Dbxref=Genbank:WP_011409611.1;Name=WP_011409611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304318.1;locus_tag=LNP58_RS11145;product=gamma carbonic anhydrase family protein;protein_id=WP_011409611.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2356631 2357665 . - . ID=gene-LNP58_RS11150;Name=LNP58_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11150;old_locus_tag=LNP58_11135 NZ_CP086372.1 Protein Homology CDS 2356631 2357665 . - 0 ID=cds-WP_011407587.1-2;Parent=gene-LNP58_RS11150;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=LNP58_RS11150;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2357722 2358311 . - . ID=gene-LNP58_RS11155;Name=LNP58_RS11155;end_range=2358311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11155;old_locus_tag=LNP58_11140;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2357722 2358311 . - 0 ID=cds-LNP58_RS11155;Parent=gene-LNP58_RS11155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2358311,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11155;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2358395 2359360 . + . ID=gene-LNP58_RS11160;Name=LNP58_RS11160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11160;old_locus_tag=LNP58_11145;pseudo=true NZ_CP086372.1 Protein Homology CDS 2358395 2359360 . + 0 ID=cds-LNP58_RS11160;Parent=gene-LNP58_RS11160;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11160;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2359378 2359551 . - . ID=gene-LNP58_RS11165;Name=LNP58_RS11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11165;old_locus_tag=LNP58_11150;partial=true;pseudo=true;start_range=.,2359378 NZ_CP086372.1 Protein Homology CDS 2359378 2359551 . - 0 ID=cds-LNP58_RS11165;Parent=gene-LNP58_RS11165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS11165;partial=true;product=transposase;pseudo=true;start_range=.,2359378;transl_table=11 NZ_CP086372.1 RefSeq gene 2359750 2361057 . + . ID=gene-LNP58_RS11170;Name=LNP58_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11170;old_locus_tag=LNP58_11155 NZ_CP086372.1 Protein Homology CDS 2359750 2361057 . + 0 ID=cds-WP_011260552.1;Parent=gene-LNP58_RS11170;Dbxref=Genbank:WP_011260552.1;Name=WP_011260552.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117476.1;locus_tag=LNP58_RS11170;product=MFS transporter;protein_id=WP_011260552.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2361196 2362455 . + . ID=gene-LNP58_RS11175;Name=LNP58_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11175;old_locus_tag=LNP58_11160 NZ_CP086372.1 Protein Homology CDS 2361196 2362455 . + 0 ID=cds-WP_011409609.1;Parent=gene-LNP58_RS11175;Dbxref=Genbank:WP_011409609.1;Name=WP_011409609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172339.1;locus_tag=LNP58_RS11175;product=HD-GYP domain-containing protein;protein_id=WP_011409609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2362884 2363417 . + . ID=gene-LNP58_RS11180;Name=LNP58_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11180;old_locus_tag=LNP58_11165 NZ_CP086372.1 Protein Homology CDS 2362884 2363417 . + 0 ID=cds-WP_041182305.1;Parent=gene-LNP58_RS11180;Dbxref=Genbank:WP_041182305.1;Name=WP_041182305.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912782.1;locus_tag=LNP58_RS11180;product=MarR family transcriptional regulator;protein_id=WP_041182305.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2363428 2364804 . - . ID=gene-LNP58_RS11185;Name=LNP58_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11185;old_locus_tag=LNP58_11170 NZ_CP086372.1 Protein Homology CDS 2363428 2364804 . - 0 ID=cds-WP_228329748.1;Parent=gene-LNP58_RS11185;Dbxref=Genbank:WP_228329748.1;Name=WP_228329748.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS11185;product=IS5 family transposase;protein_id=WP_228329748.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2365039 2365197 . - . ID=gene-LNP58_RS11190;Name=LNP58_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11190;old_locus_tag=LNP58_11175 NZ_CP086372.1 Protein Homology CDS 2365039 2365197 . - 0 ID=cds-WP_011260548.1;Parent=gene-LNP58_RS11190;Dbxref=Genbank:WP_011260548.1;Name=WP_011260548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260548.1;locus_tag=LNP58_RS11190;product=DUF1328 domain-containing protein;protein_id=WP_011260548.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2365262 2366272 . - . ID=gene-LNP58_RS11195;Name=LNP58_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11195;old_locus_tag=LNP58_11180 NZ_CP086372.1 Protein Homology CDS 2365262 2366272 . - 0 ID=cds-WP_011409607.1;Parent=gene-LNP58_RS11195;Dbxref=Genbank:WP_011409607.1;Name=WP_011409607.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572201.1;locus_tag=LNP58_RS11195;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011409607.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2366501 2368171 . - . ID=gene-LNP58_RS11200;Name=LNP58_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11200;old_locus_tag=LNP58_11185 NZ_CP086372.1 Protein Homology CDS 2366501 2368171 . - 0 ID=cds-WP_011260546.1;Parent=gene-LNP58_RS11200;Dbxref=Genbank:WP_011260546.1;Name=WP_011260546.1;Ontology_term=GO:0006631,GO:0031956;gbkey=CDS;go_function=medium-chain fatty acid-CoA ligase activity|0031956||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462752.1;locus_tag=LNP58_RS11200;product=fatty acid CoA ligase family protein;protein_id=WP_011260546.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2368490 2368873 . + . ID=gene-LNP58_RS11205;Name=LNP58_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11205;old_locus_tag=LNP58_11190 NZ_CP086372.1 Protein Homology CDS 2368490 2368873 . + 0 ID=cds-WP_011409606.1;Parent=gene-LNP58_RS11205;Dbxref=Genbank:WP_011409606.1;Name=WP_011409606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849671.1;locus_tag=LNP58_RS11205;product=YkgJ family cysteine cluster protein;protein_id=WP_011409606.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2369095 2369997 . - . ID=gene-LNP58_RS11210;Name=LNP58_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11210;old_locus_tag=LNP58_11195 NZ_CP086372.1 Protein Homology CDS 2369095 2369997 . - 0 ID=cds-WP_011260544.1;Parent=gene-LNP58_RS11210;Dbxref=Genbank:WP_011260544.1;Name=WP_011260544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849672.1;locus_tag=LNP58_RS11210;product=alpha/beta fold hydrolase;protein_id=WP_011260544.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2369994 2372489 . - . ID=gene-LNP58_RS11215;Name=LNP58_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11215;old_locus_tag=LNP58_11200 NZ_CP086372.1 Protein Homology CDS 2369994 2372489 . - 0 ID=cds-WP_011409605.1;Parent=gene-LNP58_RS11215;Dbxref=Genbank:WP_011409605.1;Name=WP_011409605.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409605.1;locus_tag=LNP58_RS11215;product=DEAD/DEAH box helicase family protein;protein_id=WP_011409605.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2372497 2374128 . - . ID=gene-LNP58_RS11220;Name=LNP58_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11220;old_locus_tag=LNP58_11205 NZ_CP086372.1 Protein Homology CDS 2372497 2374128 . - 0 ID=cds-WP_011260542.1;Parent=gene-LNP58_RS11220;Dbxref=Genbank:WP_011260542.1;Name=WP_011260542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379854.1;locus_tag=LNP58_RS11220;product=site-specific DNA-methyltransferase;protein_id=WP_011260542.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2374125 2375288 . - . ID=gene-LNP58_RS11225;Name=LNP58_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11225;old_locus_tag=LNP58_11210 NZ_CP086372.1 Protein Homology CDS 2374125 2375288 . - 0 ID=cds-WP_011260541.1;Parent=gene-LNP58_RS11225;Dbxref=Genbank:WP_011260541.1;Name=WP_011260541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112724.1;locus_tag=LNP58_RS11225;product=Fic family protein;protein_id=WP_011260541.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2375360 2376376 . - . ID=gene-LNP58_RS11230;Name=LNP58_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11230;old_locus_tag=LNP58_11215 NZ_CP086372.1 Protein Homology CDS 2375360 2376376 . - 0 ID=cds-WP_011260540.1;Parent=gene-LNP58_RS11230;Dbxref=Genbank:WP_011260540.1;Name=WP_011260540.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=LNP58_RS11230;product=3-oxoacyl-ACP synthase III;protein_id=WP_011260540.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2376478 2376798 . - . ID=gene-LNP58_RS11235;Name=LNP58_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11235;old_locus_tag=LNP58_11220 NZ_CP086372.1 Protein Homology CDS 2376478 2376798 . - 0 ID=cds-WP_010370565.1;Parent=gene-LNP58_RS11235;Dbxref=Genbank:WP_010370565.1;Name=WP_010370565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=LNP58_RS11235;product=DUF4156 domain-containing protein;protein_id=WP_010370565.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2377184 2377645 . + . ID=gene-LNP58_RS11240;Name=LNP58_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11240;old_locus_tag=LNP58_11225 NZ_CP086372.1 Protein Homology CDS 2377184 2377645 . + 0 ID=cds-WP_011409604.1;Parent=gene-LNP58_RS11240;Dbxref=Genbank:WP_011409604.1;Name=WP_011409604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912218.1;locus_tag=LNP58_RS11240;product=hypothetical protein;protein_id=WP_011409604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2377672 2378148 . + . ID=gene-LNP58_RS11245;Name=LNP58_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11245;old_locus_tag=LNP58_11230 NZ_CP086372.1 Protein Homology CDS 2377672 2378148 . + 0 ID=cds-WP_011260538.1;Parent=gene-LNP58_RS11245;Dbxref=Genbank:WP_011260538.1;Name=WP_011260538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301073.1;locus_tag=LNP58_RS11245;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_011260538.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2378490 2379713 . - . ID=gene-LNP58_RS11250;Name=LNP58_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11250;old_locus_tag=LNP58_11235 NZ_CP086372.1 Protein Homology CDS 2378490 2379713 . - 0 ID=cds-WP_011260537.1;Parent=gene-LNP58_RS11250;Dbxref=Genbank:WP_011260537.1;Name=WP_011260537.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501531.1;locus_tag=LNP58_RS11250;product=MFS transporter;protein_id=WP_011260537.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2379818 2380429 . - . ID=gene-LNP58_RS11255;Name=LNP58_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11255;old_locus_tag=LNP58_11240 NZ_CP086372.1 Protein Homology CDS 2379818 2380429 . - 0 ID=cds-WP_011260536.1;Parent=gene-LNP58_RS11255;Dbxref=Genbank:WP_011260536.1;Name=WP_011260536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966364.1;locus_tag=LNP58_RS11255;product=hypothetical protein;protein_id=WP_011260536.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2380531 2381280 . - . ID=gene-LNP58_RS11260;Name=LNP58_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11260;old_locus_tag=LNP58_11245 NZ_CP086372.1 Protein Homology CDS 2380531 2381280 . - 0 ID=cds-WP_011409603.1;Parent=gene-LNP58_RS11260;Dbxref=Genbank:WP_011409603.1;Name=WP_011409603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501529.1;locus_tag=LNP58_RS11260;product=hypothetical protein;protein_id=WP_011409603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2381471 2382817 . - . ID=gene-LNP58_RS11265;Name=LNP58_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11265;old_locus_tag=LNP58_11250 NZ_CP086372.1 Protein Homology CDS 2381471 2382817 . - 0 ID=cds-WP_011260534.1;Parent=gene-LNP58_RS11265;Dbxref=Genbank:WP_011260534.1;Name=WP_011260534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966360.1;locus_tag=LNP58_RS11265;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011260534.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2382802 2384244 . - . ID=gene-LNP58_RS11270;Name=LNP58_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11270;old_locus_tag=LNP58_11255 NZ_CP086372.1 Protein Homology CDS 2382802 2384244 . - 0 ID=cds-WP_011260533.1;Parent=gene-LNP58_RS11270;Dbxref=Genbank:WP_011260533.1;Name=WP_011260533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156414.1;locus_tag=LNP58_RS11270;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_011260533.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2384294 2386003 . - . ID=gene-LNP58_RS11275;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LNP58_RS11275;old_locus_tag=LNP58_11260 NZ_CP086372.1 Protein Homology CDS 2384294 2386003 . - 0 ID=cds-WP_178383456.1;Parent=gene-LNP58_RS11275;Dbxref=Genbank:WP_178383456.1;Name=WP_178383456.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089006.1;locus_tag=LNP58_RS11275;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_178383456.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2386379 2386975 . + . ID=gene-LNP58_RS11280;Name=LNP58_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11280;old_locus_tag=LNP58_11265 NZ_CP086372.1 Protein Homology CDS 2386379 2386975 . + 0 ID=cds-WP_011260531.1;Parent=gene-LNP58_RS11280;Dbxref=Genbank:WP_011260531.1;Name=WP_011260531.1;Ontology_term=GO:0009372;gbkey=CDS;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451122.1;locus_tag=LNP58_RS11280;product=Ax21 family protein;protein_id=WP_011260531.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2387298 2388323 . - . ID=gene-LNP58_RS11285;Name=LNP58_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11285;old_locus_tag=LNP58_11270 NZ_CP086372.1 Protein Homology CDS 2387298 2388323 . - 0 ID=cds-WP_011409602.1;Parent=gene-LNP58_RS11285;Dbxref=Genbank:WP_011409602.1;Name=WP_011409602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035460.1;locus_tag=LNP58_RS11285;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_011409602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2388339 2388854 . - . ID=gene-LNP58_RS11290;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LNP58_RS11290;old_locus_tag=LNP58_11275 NZ_CP086372.1 Protein Homology CDS 2388339 2388854 . - 0 ID=cds-WP_011260529.1;Parent=gene-LNP58_RS11290;Dbxref=Genbank:WP_011260529.1;Name=WP_011260529.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501523.1;locus_tag=LNP58_RS11290;product=protein-export chaperone SecB;protein_id=WP_011260529.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2388964 2389398 . - . ID=gene-LNP58_RS11295;Name=LNP58_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11295;old_locus_tag=LNP58_11280 NZ_CP086372.1 Protein Homology CDS 2388964 2389398 . - 0 ID=cds-WP_011260528.1;Parent=gene-LNP58_RS11295;Dbxref=Genbank:WP_011260528.1;Name=WP_011260528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156410.1;locus_tag=LNP58_RS11295;product=rhodanese-like domain-containing protein;protein_id=WP_011260528.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2389474 2389896 . - . ID=gene-LNP58_RS11300;Name=LNP58_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11300;old_locus_tag=LNP58_11285 NZ_CP086372.1 Protein Homology CDS 2389474 2389896 . - 0 ID=cds-WP_011409601.1;Parent=gene-LNP58_RS11300;Dbxref=Genbank:WP_011409601.1;Name=WP_011409601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912206.1;locus_tag=LNP58_RS11300;product=hypothetical protein;protein_id=WP_011409601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2389925 2390395 . - . ID=gene-LNP58_RS11305;Name=LNP58_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11305;old_locus_tag=LNP58_11290 NZ_CP086372.1 Protein Homology CDS 2389925 2390395 . - 0 ID=cds-WP_027703675.1;Parent=gene-LNP58_RS11305;Dbxref=Genbank:WP_027703675.1;Name=WP_027703675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156408.1;locus_tag=LNP58_RS11305;product=YiiD C-terminal domain-containing protein;protein_id=WP_027703675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2390858 2391823 . + . ID=gene-LNP58_RS11310;Name=LNP58_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11310;old_locus_tag=LNP58_11295 NZ_CP086372.1 Protein Homology CDS 2390858 2391823 . + 0 ID=cds-WP_069964616.1;Parent=gene-LNP58_RS11310;Dbxref=Genbank:WP_069964616.1;Name=WP_069964616.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11310;product=IS1595-like element ISXo5 family transposase;protein_id=WP_069964616.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2391830 2392154 . + . ID=gene-LNP58_RS11315;Name=LNP58_RS11315;end_range=2392154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11315;old_locus_tag=LNP58_11300;partial=true;pseudo=true;start_range=.,2391830 NZ_CP086372.1 Protein Homology CDS 2391830 2392154 . + 0 ID=cds-LNP58_RS11315;Parent=gene-LNP58_RS11315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2392154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11315;partial=true;product=transposase;pseudo=true;start_range=.,2391830;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2392242 2393207 . + . ID=gene-LNP58_RS11320;Name=LNP58_RS11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11320;old_locus_tag=LNP58_11305;pseudo=true NZ_CP086372.1 Protein Homology CDS 2392242 2393207 . + 0 ID=cds-LNP58_RS11320;Parent=gene-LNP58_RS11320;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11320;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2393212 2393622 . + . ID=gene-LNP58_RS11325;Name=LNP58_RS11325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11325;old_locus_tag=LNP58_11310;partial=true;pseudo=true;start_range=.,2393212 NZ_CP086372.1 Protein Homology CDS 2393212 2393622 . + 0 ID=cds-LNP58_RS11325;Parent=gene-LNP58_RS11325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11325;partial=true;product=IS5-like element ISXo3 family transposase;pseudo=true;start_range=.,2393212;transl_table=11 NZ_CP086372.1 RefSeq gene 2393952 2395319 . + . ID=gene-LNP58_RS11330;Name=LNP58_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11330;old_locus_tag=LNP58_11315 NZ_CP086372.1 Protein Homology CDS 2393952 2395319 . + 0 ID=cds-WP_011409598.1;Parent=gene-LNP58_RS11330;Dbxref=Genbank:WP_011409598.1;Name=WP_011409598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973536.1;locus_tag=LNP58_RS11330;product=VOC family protein;protein_id=WP_011409598.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2395609 2398749 . - . ID=gene-LNP58_RS11335;Name=LNP58_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11335;old_locus_tag=LNP58_11320 NZ_CP086372.1 Protein Homology CDS 2395609 2398749 . - 0 ID=cds-WP_011409597.1;Parent=gene-LNP58_RS11335;Dbxref=Genbank:WP_011409597.1;Name=WP_011409597.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171705.1;locus_tag=LNP58_RS11335;product=efflux RND transporter permease subunit;protein_id=WP_011409597.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2398883 2402131 . - . ID=gene-LNP58_RS11340;Name=LNP58_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11340;old_locus_tag=LNP58_11325 NZ_CP086372.1 Protein Homology CDS 2398883 2402131 . - 0 ID=cds-WP_011260521.1;Parent=gene-LNP58_RS11340;Dbxref=Genbank:WP_011260521.1;Name=WP_011260521.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238036.1;locus_tag=LNP58_RS11340;product=efflux RND transporter permease subunit;protein_id=WP_011260521.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2402224 2403468 . - . ID=gene-LNP58_RS11345;Name=LNP58_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11345;old_locus_tag=LNP58_11330 NZ_CP086372.1 Protein Homology CDS 2402224 2403468 . - 0 ID=cds-WP_011260520.1;Parent=gene-LNP58_RS11345;Dbxref=Genbank:WP_011260520.1;Name=WP_011260520.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=LNP58_RS11345;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011260520.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2403728 2405044 . + . ID=gene-LNP58_RS11350;Name=LNP58_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11350;old_locus_tag=LNP58_11335 NZ_CP086372.1 Protein Homology CDS 2403728 2405044 . + 0 ID=cds-WP_069960034.1;Parent=gene-LNP58_RS11350;Dbxref=Genbank:WP_069960034.1;Name=WP_069960034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304562.1;locus_tag=LNP58_RS11350;product=M20 family metallopeptidase;protein_id=WP_069960034.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2405051 2405710 . - . ID=gene-LNP58_RS11355;Name=LNP58_RS11355;end_range=2405710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11355;old_locus_tag=LNP58_11340;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2405051 2405710 . - 0 ID=cds-LNP58_RS11355;Parent=gene-LNP58_RS11355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2405710,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=LNP58_RS11355;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2405803 2406618 . + . ID=gene-LNP58_RS11360;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LNP58_RS11360;old_locus_tag=LNP58_11345 NZ_CP086372.1 Protein Homology CDS 2405803 2406618 . + 0 ID=cds-WP_011260517.1;Parent=gene-LNP58_RS11360;Dbxref=Genbank:WP_011260517.1;Name=WP_011260517.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1;locus_tag=LNP58_RS11360;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_011260517.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2406722 2407032 . + . ID=gene-LNP58_RS11365;Name=LNP58_RS11365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11365;old_locus_tag=LNP58_11350;pseudo=true NZ_CP086372.1 Protein Homology CDS 2406722 2407032 . + 0 ID=cds-LNP58_RS11365;Parent=gene-LNP58_RS11365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923039.1;locus_tag=LNP58_RS11365;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2407086 2408270 . + . ID=gene-LNP58_RS11370;Name=LNP58_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11370;old_locus_tag=LNP58_11355 NZ_CP086372.1 Protein Homology CDS 2407086 2408270 . + 0 ID=cds-WP_113063199.1;Parent=gene-LNP58_RS11370;Dbxref=Genbank:WP_113063199.1;Name=WP_113063199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS11370;product=IS256-like element IS1113 family transposase;protein_id=WP_113063199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2408508 2408768 . - . ID=gene-LNP58_RS11375;Name=LNP58_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11375;old_locus_tag=LNP58_11360 NZ_CP086372.1 GeneMarkS-2+ CDS 2408508 2408768 . - 0 ID=cds-WP_200898175.1;Parent=gene-LNP58_RS11375;Dbxref=Genbank:WP_200898175.1;Name=WP_200898175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11375;product=hypothetical protein;protein_id=WP_200898175.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2408898 2409080 . + . ID=gene-LNP58_RS11380;Name=LNP58_RS11380;end_range=2409080,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11380;old_locus_tag=LNP58_11365;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2408898 2409080 . + 0 ID=cds-LNP58_RS11380;Parent=gene-LNP58_RS11380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2409080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403018.1;locus_tag=LNP58_RS11380;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2409357 2409653 . - . ID=gene-LNP58_RS11385;Name=LNP58_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11385;old_locus_tag=LNP58_11370 NZ_CP086372.1 GeneMarkS-2+ CDS 2409357 2409653 . - 0 ID=cds-WP_155296585.1;Parent=gene-LNP58_RS11385;Dbxref=Genbank:WP_155296585.1;Name=WP_155296585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11385;product=hypothetical protein;protein_id=WP_155296585.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2410220 2410795 . - . ID=gene-LNP58_RS11390;Name=LNP58_RS11390;end_range=2410795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11390;old_locus_tag=LNP58_11375;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2410220 2410795 . - 0 ID=cds-LNP58_RS11390;Parent=gene-LNP58_RS11390;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2410795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS11390;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2410839 2411637 . + . ID=gene-LNP58_RS11395;Name=LNP58_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11395;old_locus_tag=LNP58_11380 NZ_CP086372.1 Protein Homology CDS 2410839 2411110 . + 0 ID=cds-WP_115801910.1;Parent=gene-LNP58_RS11395;Dbxref=Genbank:WP_115801910.1;Name=WP_115801910.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11395;product=IS5 family transposase;protein_id=WP_115801910.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2411109 2411637 . + 1 ID=cds-WP_115801910.1;Parent=gene-LNP58_RS11395;Dbxref=Genbank:WP_115801910.1;Name=WP_115801910.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11395;product=IS5 family transposase;protein_id=WP_115801910.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2411647 2412222 . + . ID=gene-LNP58_RS11400;Name=LNP58_RS11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11400;old_locus_tag=LNP58_11385;partial=true;pseudo=true;start_range=.,2411647 NZ_CP086372.1 Protein Homology CDS 2411647 2412222 . + 0 ID=cds-LNP58_RS11400;Parent=gene-LNP58_RS11400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS11400;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,2411647;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2412323 2413486 . + . ID=gene-LNP58_RS11405;Name=LNP58_RS11405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11405;old_locus_tag=LNP58_11390;pseudo=true NZ_CP086372.1 Protein Homology CDS 2412323 2413486 . + 0 ID=cds-LNP58_RS11405;Parent=gene-LNP58_RS11405;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035386.1;locus_tag=LNP58_RS11405;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2413669 2413815 . + . ID=gene-LNP58_RS11410;Name=LNP58_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11410;old_locus_tag=LNP58_11395;partial=true;pseudo=true;start_range=.,2413669 NZ_CP086372.1 Protein Homology CDS 2413669 2413815 . + 0 ID=cds-LNP58_RS11410;Parent=gene-LNP58_RS11410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS11410;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2413669;transl_table=11 NZ_CP086372.1 RefSeq gene 2413845 2415221 . - . ID=gene-LNP58_RS11415;Name=LNP58_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11415;old_locus_tag=LNP58_11400 NZ_CP086372.1 Protein Homology CDS 2413845 2415221 . - 0 ID=cds-WP_069964614.1;Parent=gene-LNP58_RS11415;Dbxref=Genbank:WP_069964614.1;Name=WP_069964614.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS11415;product=IS5 family transposase;protein_id=WP_069964614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2415370 2417082 . - . ID=gene-LNP58_RS11420;Name=LNP58_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11420;old_locus_tag=LNP58_11405 NZ_CP086372.1 Protein Homology CDS 2415370 2417082 . - 0 ID=cds-WP_069960113.1;Parent=gene-LNP58_RS11420;Dbxref=Genbank:WP_069960113.1;Name=WP_069960113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300075.1;locus_tag=LNP58_RS11420;product=hypothetical protein;protein_id=WP_069960113.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2417272 2419503 . + . ID=gene-LNP58_RS11425;Name=LNP58_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11425;old_locus_tag=LNP58_11410 NZ_CP086372.1 Protein Homology CDS 2417272 2419503 . + 0 ID=cds-WP_011409585.1;Parent=gene-LNP58_RS11425;Dbxref=Genbank:WP_011409585.1;Name=WP_011409585.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157024.1;locus_tag=LNP58_RS11425;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_011409585.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2419577 2419809 . - . ID=gene-LNP58_RS11430;Name=LNP58_RS11430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11430;old_locus_tag=LNP58_11415;pseudo=true NZ_CP086372.1 Protein Homology CDS 2419577 2419809 . - 0 ID=cds-LNP58_RS11430;Parent=gene-LNP58_RS11430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300073.1;locus_tag=LNP58_RS11430;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2419835 2420059 . + . ID=gene-LNP58_RS11435;Name=LNP58_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11435;old_locus_tag=LNP58_11420;partial=true;pseudo=true;start_range=.,2419835 NZ_CP086372.1 Protein Homology CDS 2419835 2420059 . + 0 ID=cds-LNP58_RS11435;Parent=gene-LNP58_RS11435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167547.1;locus_tag=LNP58_RS11435;partial=true;product=biotin transporter BioY;pseudo=true;start_range=.,2419835;transl_table=11 NZ_CP086372.1 RefSeq gene 2420107 2421149 . - . ID=gene-LNP58_RS11440;Name=LNP58_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11440;old_locus_tag=LNP58_11425 NZ_CP086372.1 Protein Homology CDS 2420954 2421149 . - 0 ID=cds-WP_229001943.1;Parent=gene-LNP58_RS11440;Dbxref=Genbank:WP_229001943.1;Name=WP_229001943.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS11440;product=IS3 family transposase;protein_id=WP_229001943.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2420107 2420954 . - 2 ID=cds-WP_229001943.1;Parent=gene-LNP58_RS11440;Dbxref=Genbank:WP_229001943.1;Name=WP_229001943.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS11440;product=IS3 family transposase;protein_id=WP_229001943.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2421254 2421931 . - . ID=gene-LNP58_RS11445;Name=LNP58_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11445;old_locus_tag=LNP58_11430 NZ_CP086372.1 Protein Homology CDS 2421254 2421931 . - 0 ID=cds-WP_011409582.1;Parent=gene-LNP58_RS11445;Dbxref=Genbank:WP_011409582.1;Name=WP_011409582.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019530.2;locus_tag=LNP58_RS11445;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_011409582.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2422637 2423218 . + . ID=gene-LNP58_RS11450;Name=LNP58_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11450;old_locus_tag=LNP58_11435 NZ_CP086372.1 Protein Homology CDS 2422637 2423218 . + 0 ID=cds-WP_011409581.1;Parent=gene-LNP58_RS11450;Dbxref=Genbank:WP_011409581.1;Name=WP_011409581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802968.1;locus_tag=LNP58_RS11450;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_011409581.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2423370 2423999 . + . ID=gene-LNP58_RS11455;Name=LNP58_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11455;old_locus_tag=LNP58_11440 NZ_CP086372.1 Protein Homology CDS 2423370 2423999 . + 0 ID=cds-WP_011260499.1;Parent=gene-LNP58_RS11455;Dbxref=Genbank:WP_011260499.1;Name=WP_011260499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260499.1;locus_tag=LNP58_RS11455;product=flavin reductase family protein;protein_id=WP_011260499.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2424117 2425154 . + . ID=gene-LNP58_RS11460;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LNP58_RS11460;old_locus_tag=LNP58_11445 NZ_CP086372.1 Protein Homology CDS 2424117 2425154 . + 0 ID=cds-WP_011409580.1;Parent=gene-LNP58_RS11460;Dbxref=Genbank:WP_011409580.1;Name=WP_011409580.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157930.1;locus_tag=LNP58_RS11460;product=anthranilate phosphoribosyltransferase;protein_id=WP_011409580.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2425216 2426088 . + . ID=gene-LNP58_RS11465;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LNP58_RS11465;old_locus_tag=LNP58_11450 NZ_CP086372.1 Protein Homology CDS 2425216 2426088 . + 0 ID=cds-WP_027703892.1;Parent=gene-LNP58_RS11465;Dbxref=Genbank:WP_027703892.1;Name=WP_027703892.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303763.1;locus_tag=LNP58_RS11465;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_027703892.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2426081 2426797 . + . ID=gene-LNP58_RS11470;Name=LNP58_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11470;old_locus_tag=LNP58_11455 NZ_CP086372.1 Protein Homology CDS 2426081 2426797 . + 0 ID=cds-WP_011409579.1;Parent=gene-LNP58_RS11470;Dbxref=Genbank:WP_011409579.1;Name=WP_011409579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808250.1;locus_tag=LNP58_RS11470;product=haloacid dehalogenase-like hydrolase;protein_id=WP_011409579.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2427118 2427810 . - . ID=gene-LNP58_RS11475;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LNP58_RS11475;old_locus_tag=LNP58_11460 NZ_CP086372.1 Protein Homology CDS 2427118 2427810 . - 0 ID=cds-WP_011260495.1;Parent=gene-LNP58_RS11475;Dbxref=Genbank:WP_011260495.1;Name=WP_011260495.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1;locus_tag=LNP58_RS11475;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_011260495.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2427948 2428742 . + . ID=gene-LNP58_RS11480;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LNP58_RS11480;old_locus_tag=LNP58_11465 NZ_CP086372.1 Protein Homology CDS 2427948 2428742 . + 0 ID=cds-WP_011260494.1;Parent=gene-LNP58_RS11480;Dbxref=Genbank:WP_011260494.1;Name=WP_011260494.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1;locus_tag=LNP58_RS11480;product=adenosylmethionine decarboxylase;protein_id=WP_011260494.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2428902 2429216 . + . ID=gene-LNP58_RS11485;Name=LNP58_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11485;old_locus_tag=LNP58_11470 NZ_CP086372.1 Protein Homology CDS 2428902 2429216 . + 0 ID=cds-WP_011409578.1;Parent=gene-LNP58_RS11485;Dbxref=Genbank:WP_011409578.1;Name=WP_011409578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990694.1;locus_tag=LNP58_RS11485;product=multidrug efflux SMR transporter;protein_id=WP_011409578.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2429472 2430125 . - . ID=gene-LNP58_RS11490;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LNP58_RS11490;old_locus_tag=LNP58_11475 NZ_CP086372.1 Protein Homology CDS 2429472 2430125 . - 0 ID=cds-WP_069960112.1;Parent=gene-LNP58_RS11490;Dbxref=Genbank:WP_069960112.1;Name=WP_069960112.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483072.1;locus_tag=LNP58_RS11490;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_069960112.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2430311 2430739 . + . ID=gene-LNP58_RS11495;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LNP58_RS11495;old_locus_tag=LNP58_11480 NZ_CP086372.1 Protein Homology CDS 2430311 2430739 . + 0 ID=cds-WP_011260491.1;Parent=gene-LNP58_RS11495;Dbxref=Genbank:WP_011260491.1;Name=WP_011260491.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451009.1;locus_tag=LNP58_RS11495;product=50S ribosomal protein L13;protein_id=WP_011260491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2430743 2431135 . + . ID=gene-LNP58_RS11500;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LNP58_RS11500;old_locus_tag=LNP58_11485 NZ_CP086372.1 Protein Homology CDS 2430743 2431135 . + 0 ID=cds-WP_005990700.1;Parent=gene-LNP58_RS11500;Dbxref=Genbank:WP_005990700.1;Name=WP_005990700.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=LNP58_RS11500;product=30S ribosomal protein S9;protein_id=WP_005990700.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2431363 2431436 . - . ID=gene-LNP58_RS11505;Name=LNP58_RS11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS11505;old_locus_tag=LNP58_11490 NZ_CP086372.1 tRNAscan-SE tRNA 2431363 2431436 . - . ID=rna-LNP58_RS11505;Parent=gene-LNP58_RS11505;anticodon=(pos:complement(2431402..2431404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS11505;product=tRNA-Gln NZ_CP086372.1 tRNAscan-SE exon 2431363 2431436 . - . ID=exon-LNP58_RS11505-1;Parent=rna-LNP58_RS11505;anticodon=(pos:complement(2431402..2431404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS11505;product=tRNA-Gln NZ_CP086372.1 RefSeq gene 2431489 2431565 . - . ID=gene-LNP58_RS11510;Name=LNP58_RS11510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS11510;old_locus_tag=LNP58_11495 NZ_CP086372.1 tRNAscan-SE tRNA 2431489 2431565 . - . ID=rna-LNP58_RS11510;Parent=gene-LNP58_RS11510;anticodon=(pos:complement(2431529..2431531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS11510;product=tRNA-Met NZ_CP086372.1 tRNAscan-SE exon 2431489 2431565 . - . ID=exon-LNP58_RS11510-1;Parent=rna-LNP58_RS11510;anticodon=(pos:complement(2431529..2431531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS11510;product=tRNA-Met NZ_CP086372.1 RefSeq gene 2431684 2432301 . + . ID=gene-LNP58_RS11515;Name=LNP58_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11515;old_locus_tag=LNP58_11500 NZ_CP086372.1 Protein Homology CDS 2431684 2432301 . + 0 ID=cds-WP_011260490.1;Parent=gene-LNP58_RS11515;Dbxref=Genbank:WP_011260490.1;Name=WP_011260490.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167453.1;locus_tag=LNP58_RS11515;product=RNA pyrophosphohydrolase;protein_id=WP_011260490.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2432382 2432597 . + . ID=gene-LNP58_RS11520;Name=LNP58_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11520;old_locus_tag=LNP58_11505 NZ_CP086372.1 Protein Homology CDS 2432382 2432597 . + 0 ID=cds-WP_027703893.1;Parent=gene-LNP58_RS11520;Dbxref=Genbank:WP_027703893.1;Name=WP_027703893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411309.1;locus_tag=LNP58_RS11520;product=(2Fe-2S)-binding protein;protein_id=WP_027703893.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2432940 2433410 . + . ID=gene-LNP58_RS11525;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LNP58_RS11525;old_locus_tag=LNP58_11510 NZ_CP086372.1 Protein Homology CDS 2432940 2433410 . + 0 ID=cds-WP_069960028.1;Parent=gene-LNP58_RS11525;Dbxref=Genbank:WP_069960028.1;Name=WP_069960028.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1;locus_tag=LNP58_RS11525;product=bacterioferritin;protein_id=WP_069960028.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2433423 2434388 . - . ID=gene-LNP58_RS11530;Name=LNP58_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11530;old_locus_tag=LNP58_11515 NZ_CP086372.1 Protein Homology CDS 2433423 2434388 . - 0 ID=cds-WP_109182027.1-2;Parent=gene-LNP58_RS11530;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11530;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2434479 2435444 . - . ID=gene-LNP58_RS11535;Name=LNP58_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11535;old_locus_tag=LNP58_11520;partial=true;pseudo=true;start_range=.,2434479 NZ_CP086372.1 Protein Homology CDS 2434479 2435444 . - 0 ID=cds-LNP58_RS11535;Parent=gene-LNP58_RS11535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS11535;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2434479;transl_table=11 NZ_CP086372.1 RefSeq gene 2435604 2438804 . - . ID=gene-LNP58_RS11540;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LNP58_RS11540;old_locus_tag=LNP58_11525 NZ_CP086372.1 Protein Homology CDS 2435604 2438804 . - 0 ID=cds-WP_011260487.1;Parent=gene-LNP58_RS11540;Dbxref=Genbank:WP_011260487.1;Name=WP_011260487.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301724.1;locus_tag=LNP58_RS11540;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_011260487.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2439081 2439557 . + . ID=gene-LNP58_RS11545;Name=LNP58_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11545;old_locus_tag=LNP58_11530 NZ_CP086372.1 Protein Homology CDS 2439081 2439557 . + 0 ID=cds-WP_044757542.1;Parent=gene-LNP58_RS11545;Dbxref=Genbank:WP_044757542.1;Name=WP_044757542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484655.1;locus_tag=LNP58_RS11545;product=DUF2244 domain-containing protein;protein_id=WP_044757542.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2439574 2440527 . + . ID=gene-LNP58_RS11550;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LNP58_RS11550;old_locus_tag=LNP58_11535 NZ_CP086372.1 Protein Homology CDS 2439574 2440527 . + 0 ID=cds-WP_069964612.1;Parent=gene-LNP58_RS11550;Dbxref=Genbank:WP_069964612.1;Name=WP_069964612.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157718.1;locus_tag=LNP58_RS11550;product=cytochrome c oxidase subunit II;protein_id=WP_069964612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2440566 2442170 . + . ID=gene-LNP58_RS11555;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LNP58_RS11555;old_locus_tag=LNP58_11540 NZ_CP086372.1 Protein Homology CDS 2440566 2442170 . + 0 ID=cds-WP_011260484.1;Parent=gene-LNP58_RS11555;Dbxref=Genbank:WP_011260484.1;Name=WP_011260484.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501708.1;locus_tag=LNP58_RS11555;product=cytochrome c oxidase subunit I;protein_id=WP_011260484.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2442151 2442324 . + . ID=gene-LNP58_RS11560;Name=LNP58_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11560;old_locus_tag=LNP58_11545 NZ_CP086372.1 Protein Homology CDS 2442151 2442324 . + 0 ID=cds-WP_011409573.1;Parent=gene-LNP58_RS11560;Dbxref=Genbank:WP_011409573.1;Name=WP_011409573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484652.1;locus_tag=LNP58_RS11560;product=hypothetical protein;protein_id=WP_011409573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2442321 2442917 . + . ID=gene-LNP58_RS11565;Name=LNP58_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11565;old_locus_tag=LNP58_11550 NZ_CP086372.1 Protein Homology CDS 2442321 2442917 . + 0 ID=cds-WP_011260482.1;Parent=gene-LNP58_RS11565;Dbxref=Genbank:WP_011260482.1;Name=WP_011260482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163727.1;locus_tag=LNP58_RS11565;product=cytochrome c oxidase assembly protein;protein_id=WP_011260482.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2442956 2443831 . + . ID=gene-LNP58_RS11570;Name=LNP58_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11570;old_locus_tag=LNP58_11555 NZ_CP086372.1 Protein Homology CDS 2442956 2443831 . + 0 ID=cds-WP_011260481.1;Parent=gene-LNP58_RS11570;Dbxref=Genbank:WP_011260481.1;Name=WP_011260481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501710.1;locus_tag=LNP58_RS11570;product=cytochrome c oxidase subunit 3;protein_id=WP_011260481.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2443924 2444142 . - . ID=gene-LNP58_RS11575;Name=LNP58_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11575;old_locus_tag=LNP58_11560 NZ_CP086372.1 Protein Homology CDS 2443924 2444142 . - 0 ID=cds-WP_012443949.1;Parent=gene-LNP58_RS11575;Dbxref=Genbank:WP_012443949.1;Name=WP_012443949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157720.1;locus_tag=LNP58_RS11575;product=twin transmembrane helix small protein;protein_id=WP_012443949.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2444203 2444922 . + . ID=gene-LNP58_RS11580;Name=LNP58_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11580;old_locus_tag=LNP58_11565 NZ_CP086372.1 Protein Homology CDS 2444203 2444922 . + 0 ID=cds-WP_011409571.1;Parent=gene-LNP58_RS11580;Dbxref=Genbank:WP_011409571.1;Name=WP_011409571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172044.1;locus_tag=LNP58_RS11580;product=SURF1 family protein;protein_id=WP_011409571.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2444950 2445525 . + . ID=gene-LNP58_RS11585;Name=LNP58_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11585;old_locus_tag=LNP58_11570 NZ_CP086372.1 Protein Homology CDS 2444950 2445525 . + 0 ID=cds-WP_011260478.1;Parent=gene-LNP58_RS11585;Dbxref=Genbank:WP_011260478.1;Name=WP_011260478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303937.1;locus_tag=LNP58_RS11585;product=hypothetical protein;protein_id=WP_011260478.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2445536 2446699 . + . ID=gene-LNP58_RS11590;Name=LNP58_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11590;old_locus_tag=LNP58_11575 NZ_CP086372.1 Protein Homology CDS 2445536 2446699 . + 0 ID=cds-WP_011260477.1;Parent=gene-LNP58_RS11590;Dbxref=Genbank:WP_011260477.1;Name=WP_011260477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1;locus_tag=LNP58_RS11590;product=COX15/CtaA family protein;protein_id=WP_011260477.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2446702 2447598 . + . ID=gene-LNP58_RS11595;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LNP58_RS11595;old_locus_tag=LNP58_11580 NZ_CP086372.1 Protein Homology CDS 2446702 2447598 . + 0 ID=cds-WP_011409570.1;Parent=gene-LNP58_RS11595;Dbxref=Genbank:WP_011409570.1;Name=WP_011409570.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966545.1;locus_tag=LNP58_RS11595;product=heme o synthase;protein_id=WP_011409570.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2447790 2447866 . + . ID=gene-LNP58_RS11600;Name=LNP58_RS11600;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS11600;old_locus_tag=LNP58_11585 NZ_CP086372.1 cmsearch ncRNA 2447790 2447866 . + . ID=rna-LNP58_RS11600;Parent=gene-LNP58_RS11600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11600;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2447790 2447866 . + . ID=exon-LNP58_RS11600-1;Parent=rna-LNP58_RS11600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11600;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2447987 2449567 . - . ID=gene-LNP58_RS11605;Name=LNP58_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11605;old_locus_tag=LNP58_11590 NZ_CP086372.1 Protein Homology CDS 2447987 2449567 . - 0 ID=cds-WP_011409569.1;Parent=gene-LNP58_RS11605;Dbxref=Genbank:WP_011409569.1;Name=WP_011409569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1;locus_tag=LNP58_RS11605;product=thioredoxin family protein;protein_id=WP_011409569.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2449751 2450797 . - . ID=gene-LNP58_RS11610;Name=LNP58_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11610;old_locus_tag=LNP58_11595 NZ_CP086372.1 Protein Homology CDS 2449751 2450797 . - 0 ID=cds-WP_033013369.1;Parent=gene-LNP58_RS11610;Dbxref=Genbank:WP_033013369.1;Name=WP_033013369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301736.1;locus_tag=LNP58_RS11610;product=bile acid:sodium symporter;protein_id=WP_033013369.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2451022 2451288 . + . ID=gene-LNP58_RS11615;Name=LNP58_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11615;old_locus_tag=LNP58_11600 NZ_CP086372.1 GeneMarkS-2+ CDS 2451022 2451288 . + 0 ID=cds-WP_059317500.1;Parent=gene-LNP58_RS11615;Dbxref=Genbank:WP_059317500.1;Name=WP_059317500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11615;product=hypothetical protein;protein_id=WP_059317500.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2451288 2451533 . + . ID=gene-LNP58_RS11620;Name=LNP58_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11620;old_locus_tag=LNP58_11605 NZ_CP086372.1 GeneMarkS-2+ CDS 2451288 2451533 . + 0 ID=cds-WP_041182298.1;Parent=gene-LNP58_RS11620;Dbxref=Genbank:WP_041182298.1;Name=WP_041182298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11620;product=hypothetical protein;protein_id=WP_041182298.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2451523 2452839 . + . ID=gene-LNP58_RS11625;Name=LNP58_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11625;old_locus_tag=LNP58_11610 NZ_CP086372.1 Protein Homology CDS 2451523 2452839 . + 0 ID=cds-WP_069963905.1;Parent=gene-LNP58_RS11625;Dbxref=Genbank:WP_069963905.1;Name=WP_069963905.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=LNP58_RS11625;product=IS701 family transposase;protein_id=WP_069963905.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2452861 2454609 . - . ID=gene-LNP58_RS11630;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LNP58_RS11630;old_locus_tag=LNP58_11615 NZ_CP086372.1 Protein Homology CDS 2452861 2454609 . - 0 ID=cds-WP_011260472.1;Parent=gene-LNP58_RS11630;Dbxref=Genbank:WP_011260472.1;Name=WP_011260472.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506325.1;locus_tag=LNP58_RS11630;product=DNA primase;protein_id=WP_011260472.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2454699 2455661 . - . ID=gene-LNP58_RS11635;Name=LNP58_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11635;old_locus_tag=LNP58_11620 NZ_CP086372.1 Protein Homology CDS 2454699 2455661 . - 0 ID=cds-WP_012443989.1;Parent=gene-LNP58_RS11635;Dbxref=Genbank:WP_012443989.1;Name=WP_012443989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501718.1;locus_tag=LNP58_RS11635;product=YihY/virulence factor BrkB family protein;protein_id=WP_012443989.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2456234 2456309 . - . ID=gene-LNP58_RS11640;Name=LNP58_RS11640;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS11640;old_locus_tag=LNP58_11625 NZ_CP086372.1 cmsearch ncRNA 2456234 2456309 . - . ID=rna-LNP58_RS11640;Parent=gene-LNP58_RS11640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11640;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2456234 2456309 . - . ID=exon-LNP58_RS11640-1;Parent=rna-LNP58_RS11640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11640;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2457139 2457585 . - . ID=gene-LNP58_RS11645;Name=LNP58_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11645;old_locus_tag=LNP58_11630 NZ_CP086372.1 Protein Homology CDS 2457139 2457585 . - 0 ID=cds-WP_011409564.1;Parent=gene-LNP58_RS11645;Dbxref=Genbank:WP_011409564.1;Name=WP_011409564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1;locus_tag=LNP58_RS11645;product=GatB/YqeY domain-containing protein;protein_id=WP_011409564.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2457893 2458108 . - . ID=gene-LNP58_RS11650;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LNP58_RS11650;old_locus_tag=LNP58_11635 NZ_CP086372.1 Protein Homology CDS 2457893 2458108 . - 0 ID=cds-WP_002808376.1;Parent=gene-LNP58_RS11650;Dbxref=Genbank:WP_002808376.1;Name=WP_002808376.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=LNP58_RS11650;product=30S ribosomal protein S21;protein_id=WP_002808376.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2458388 2459452 . + . ID=gene-LNP58_RS11655;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LNP58_RS11655;old_locus_tag=LNP58_11640 NZ_CP086372.1 Protein Homology CDS 2458388 2459452 . + 0 ID=cds-WP_011260469.1;Parent=gene-LNP58_RS11655;Dbxref=Genbank:WP_011260469.1;Name=WP_011260469.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501720.1;locus_tag=LNP58_RS11655;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_011260469.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2459531 2459887 . + . ID=gene-LNP58_RS11660;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LNP58_RS11660;old_locus_tag=LNP58_11645 NZ_CP086372.1 Protein Homology CDS 2459531 2459887 . + 0 ID=cds-WP_011409563.1;Parent=gene-LNP58_RS11660;Dbxref=Genbank:WP_011409563.1;Name=WP_011409563.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973559.1;locus_tag=LNP58_RS11660;product=dihydroneopterin aldolase;protein_id=WP_011409563.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2460115 2462286 . + . ID=gene-LNP58_RS11665;Name=LNP58_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11665;old_locus_tag=LNP58_11650 NZ_CP086372.1 Protein Homology CDS 2460115 2462286 . + 0 ID=cds-WP_011260467.1;Parent=gene-LNP58_RS11665;Dbxref=Genbank:WP_011260467.1;Name=WP_011260467.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305265.1;locus_tag=LNP58_RS11665;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_011260467.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2462416 2462871 . - . ID=gene-LNP58_RS11670;Name=LNP58_RS11670;end_range=2462871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11670;old_locus_tag=LNP58_11655;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2462416 2462871 . - 0 ID=cds-LNP58_RS11670;Parent=gene-LNP58_RS11670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2462871,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS11670;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2462961 2463926 . + . ID=gene-LNP58_RS11675;Name=LNP58_RS11675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11675;old_locus_tag=LNP58_11660;pseudo=true NZ_CP086372.1 Protein Homology CDS 2462961 2463926 . + 0 ID=cds-LNP58_RS11675;Parent=gene-LNP58_RS11675;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11675;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2464057 2464602 . - . ID=gene-LNP58_RS11680;Name=LNP58_RS11680;end_range=2464602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11680;old_locus_tag=LNP58_11665;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2464057 2464602 . - 0 ID=cds-LNP58_RS11680;Parent=gene-LNP58_RS11680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2464602,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443584.1;locus_tag=LNP58_RS11680;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2464620 2465582 . - . ID=gene-LNP58_RS11685;Name=LNP58_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11685;old_locus_tag=LNP58_11670 NZ_CP086372.1 Protein Homology CDS 2464620 2465582 . - 0 ID=cds-WP_069960023.1;Parent=gene-LNP58_RS11685;Dbxref=Genbank:WP_069960023.1;Name=WP_069960023.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS11685;product=IS1595-like element ISXo2 family transposase;protein_id=WP_069960023.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2465674 2466195 . - . ID=gene-LNP58_RS11690;Name=LNP58_RS11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11690;old_locus_tag=LNP58_11675;partial=true;pseudo=true;start_range=.,2465674 NZ_CP086372.1 Protein Homology CDS 2465674 2466195 . - 0 ID=cds-LNP58_RS11690;Parent=gene-LNP58_RS11690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=LNP58_RS11690;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2465674;transl_table=11 NZ_CP086372.1 RefSeq gene 2466578 2467756 . - . ID=gene-LNP58_RS11695;Name=LNP58_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11695;old_locus_tag=LNP58_11680 NZ_CP086372.1 Protein Homology CDS 2466578 2467756 . - 0 ID=cds-WP_011409559.1;Parent=gene-LNP58_RS11695;Dbxref=Genbank:WP_011409559.1;Name=WP_011409559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484599.1;locus_tag=LNP58_RS11695;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_011409559.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2467931 2468365 . + . ID=gene-LNP58_RS11700;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=LNP58_RS11700;old_locus_tag=LNP58_11685 NZ_CP086372.1 Protein Homology CDS 2467931 2468365 . + 0 ID=cds-WP_011260461.1;Parent=gene-LNP58_RS11700;Dbxref=Genbank:WP_011260461.1;Name=WP_011260461.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501725.1;locus_tag=LNP58_RS11700;product=inner membrane protein YiaA;protein_id=WP_011260461.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2468420 2468753 . - . ID=gene-LNP58_RS11705;Name=LNP58_RS11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11705;old_locus_tag=LNP58_11690;pseudo=true NZ_CP086372.1 Protein Homology CDS 2468420 2468753 . - 0 ID=cds-LNP58_RS11705;Parent=gene-LNP58_RS11705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348827.1;locus_tag=LNP58_RS11705;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2468926 2469210 . - . ID=gene-LNP58_RS11710;Name=LNP58_RS11710;end_range=2469210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11710;old_locus_tag=LNP58_11695;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2468926 2469210 . - 0 ID=cds-LNP58_RS11710;Parent=gene-LNP58_RS11710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2469210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159376.1;locus_tag=LNP58_RS11710;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2469273 2469348 . + . ID=gene-LNP58_RS11715;Name=LNP58_RS11715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS11715;old_locus_tag=LNP58_11700 NZ_CP086372.1 cmsearch ncRNA 2469273 2469348 . + . ID=rna-LNP58_RS11715;Parent=gene-LNP58_RS11715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11715;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2469273 2469348 . + . ID=exon-LNP58_RS11715-1;Parent=rna-LNP58_RS11715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11715;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2469411 2469784 . + . ID=gene-LNP58_RS11720;Name=LNP58_RS11720;end_range=2469784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11720;old_locus_tag=LNP58_11705;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2469411 2469784 . + 0 ID=cds-LNP58_RS11720;Parent=gene-LNP58_RS11720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2469784,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11720;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2469801 2471036 . - . ID=gene-LNP58_RS11725;Name=LNP58_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11725;old_locus_tag=LNP58_11710 NZ_CP086372.1 Protein Homology CDS 2469801 2471036 . - 0 ID=cds-WP_011408623.1;Parent=gene-LNP58_RS11725;Dbxref=Genbank:WP_011408623.1;Name=WP_011408623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS11725;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011408623.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2471099 2471494 . + . ID=gene-LNP58_RS11730;Name=LNP58_RS11730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11730;old_locus_tag=LNP58_11715;partial=true;pseudo=true;start_range=.,2471099 NZ_CP086372.1 Protein Homology CDS 2471099 2471494 . + 0 ID=cds-LNP58_RS11730;Parent=gene-LNP58_RS11730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS11730;partial=true;product=transposase;pseudo=true;start_range=.,2471099;transl_table=11 NZ_CP086372.1 RefSeq gene 2471553 2472869 . - . ID=gene-LNP58_RS11735;Name=LNP58_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11735;old_locus_tag=LNP58_11720 NZ_CP086372.1 Protein Homology CDS 2471553 2472869 . - 0 ID=cds-WP_011409554.1;Parent=gene-LNP58_RS11735;Dbxref=Genbank:WP_011409554.1;Name=WP_011409554.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409554.1;locus_tag=LNP58_RS11735;product=amino acid permease;protein_id=WP_011409554.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2472866 2473642 . - . ID=gene-LNP58_RS11740;Name=LNP58_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11740;old_locus_tag=LNP58_11725 NZ_CP086372.1 Protein Homology CDS 2472866 2473642 . - 0 ID=cds-WP_011260456.1;Parent=gene-LNP58_RS11740;Dbxref=Genbank:WP_011260456.1;Name=WP_011260456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157008.1;locus_tag=LNP58_RS11740;product=hypothetical protein;protein_id=WP_011260456.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2473924 2474687 . + . ID=gene-LNP58_RS11745;Name=LNP58_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11745;old_locus_tag=LNP58_11730 NZ_CP086372.1 Protein Homology CDS 2473924 2474239 . + 0 ID=cds-WP_109182024.1;Parent=gene-LNP58_RS11745;Dbxref=Genbank:WP_109182024.1;Name=WP_109182024.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11745;product=IS5 family transposase;protein_id=WP_109182024.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2474239 2474687 . + 2 ID=cds-WP_109182024.1;Parent=gene-LNP58_RS11745;Dbxref=Genbank:WP_109182024.1;Name=WP_109182024.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11745;product=IS5 family transposase;protein_id=WP_109182024.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2475135 2476097 . - . ID=gene-LNP58_RS11750;Name=LNP58_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11750;old_locus_tag=LNP58_11735 NZ_CP086372.1 Protein Homology CDS 2475135 2476097 . - 0 ID=cds-WP_011409552.1;Parent=gene-LNP58_RS11750;Dbxref=Genbank:WP_011409552.1;Name=WP_011409552.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS11750;product=IS1595-like element ISXo2 family transposase;protein_id=WP_011409552.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2476317 2477115 . + . ID=gene-LNP58_RS11755;Name=LNP58_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11755;old_locus_tag=LNP58_11740 NZ_CP086372.1 Protein Homology CDS 2476317 2476588 . + 0 ID=cds-WP_099051302.1;Parent=gene-LNP58_RS11755;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11755;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2476587 2477115 . + 1 ID=cds-WP_099051302.1;Parent=gene-LNP58_RS11755;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11755;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2477169 2477967 . + . ID=gene-LNP58_RS11760;Name=LNP58_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11760;old_locus_tag=LNP58_11745 NZ_CP086372.1 Protein Homology CDS 2477169 2477440 . + 0 ID=cds-WP_094187763.1-2;Parent=gene-LNP58_RS11760;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11760;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2477439 2477967 . + 1 ID=cds-WP_094187763.1-2;Parent=gene-LNP58_RS11760;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11760;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2478041 2478117 . + . ID=gene-LNP58_RS11765;Name=LNP58_RS11765;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS11765;old_locus_tag=LNP58_11750 NZ_CP086372.1 cmsearch ncRNA 2478041 2478117 . + . ID=rna-LNP58_RS11765;Parent=gene-LNP58_RS11765;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11765;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2478041 2478117 . + . ID=exon-LNP58_RS11765-1;Parent=rna-LNP58_RS11765;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS11765;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2478122 2479219 . - . ID=gene-LNP58_RS11770;Name=LNP58_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11770;old_locus_tag=LNP58_11755 NZ_CP086372.1 Protein Homology CDS 2478122 2479219 . - 0 ID=cds-WP_027703925.1;Parent=gene-LNP58_RS11770;Dbxref=Genbank:WP_027703925.1;Name=WP_027703925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005987897.1;locus_tag=LNP58_RS11770;product=dipeptide epimerase;protein_id=WP_027703925.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2479216 2480628 . - . ID=gene-LNP58_RS11775;Name=LNP58_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11775;old_locus_tag=LNP58_11760 NZ_CP086372.1 Protein Homology CDS 2479216 2480628 . - 0 ID=cds-WP_012444005.1;Parent=gene-LNP58_RS11775;Dbxref=Genbank:WP_012444005.1;Name=WP_012444005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501731.1;locus_tag=LNP58_RS11775;product=SH3 domain-containing protein;protein_id=WP_012444005.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2480852 2481658 . + . ID=gene-LNP58_RS11780;Name=LNP58_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11780;old_locus_tag=LNP58_11765 NZ_CP086372.1 Protein Homology CDS 2480852 2481658 . + 0 ID=cds-WP_075242331.1;Parent=gene-LNP58_RS11780;Dbxref=Genbank:WP_075242331.1;Name=WP_075242331.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850303.1;locus_tag=LNP58_RS11780;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_075242331.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2481751 2482497 . + . ID=gene-LNP58_RS11785;Name=LNP58_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11785;old_locus_tag=LNP58_11770 NZ_CP086372.1 Protein Homology CDS 2481751 2482497 . + 0 ID=cds-WP_069960019.1;Parent=gene-LNP58_RS11785;Dbxref=Genbank:WP_069960019.1;Name=WP_069960019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973544.1;locus_tag=LNP58_RS11785;product=M15 family metallopeptidase;protein_id=WP_069960019.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2482804 2483001 . + . ID=gene-LNP58_RS11790;Name=LNP58_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11790;old_locus_tag=LNP58_11775 NZ_CP086372.1 Protein Homology CDS 2482804 2483001 . + 0 ID=cds-WP_011260450.1;Parent=gene-LNP58_RS11790;Dbxref=Genbank:WP_011260450.1;Name=WP_011260450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903162.1;locus_tag=LNP58_RS11790;product=CPXCG motif-containing cysteine-rich protein;protein_id=WP_011260450.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2483212 2483589 . + . ID=gene-LNP58_RS11795;Name=LNP58_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11795;old_locus_tag=LNP58_11780 NZ_CP086372.1 Protein Homology CDS 2483212 2483589 . + 0 ID=cds-WP_011260449.1;Parent=gene-LNP58_RS11795;Dbxref=Genbank:WP_011260449.1;Name=WP_011260449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911463.1;locus_tag=LNP58_RS11795;product=hypothetical protein;protein_id=WP_011260449.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2483815 2484156 . + . ID=gene-LNP58_RS11800;Name=LNP58_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11800;old_locus_tag=LNP58_11785 NZ_CP086372.1 Protein Homology CDS 2483815 2484156 . + 0 ID=cds-WP_011409547.1;Parent=gene-LNP58_RS11800;Dbxref=Genbank:WP_011409547.1;Name=WP_011409547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157012.1;locus_tag=LNP58_RS11800;product=hypothetical protein;protein_id=WP_011409547.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2484396 2484803 . + . ID=gene-LNP58_RS11805;Name=LNP58_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11805;old_locus_tag=LNP58_11790 NZ_CP086372.1 Protein Homology CDS 2484396 2484803 . + 0 ID=cds-WP_024712457.1;Parent=gene-LNP58_RS11805;Dbxref=Genbank:WP_024712457.1;Name=WP_024712457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157013.1;locus_tag=LNP58_RS11805;product=EF-hand domain-containing protein;protein_id=WP_024712457.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2484841 2485593 . + . ID=gene-LNP58_RS11810;Name=LNP58_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11810;old_locus_tag=LNP58_11795 NZ_CP086372.1 Protein Homology CDS 2484841 2485593 . + 0 ID=cds-WP_011260446.1;Parent=gene-LNP58_RS11810;Dbxref=Genbank:WP_011260446.1;Name=WP_011260446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038877.1;locus_tag=LNP58_RS11810;product=HAD family hydrolase;protein_id=WP_011260446.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2485719 2486687 . - . ID=gene-LNP58_RS11815;Name=LNP58_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11815;old_locus_tag=LNP58_11800 NZ_CP086372.1 Protein Homology CDS 2485719 2486687 . - 0 ID=cds-WP_113233848.1;Parent=gene-LNP58_RS11815;Dbxref=Genbank:WP_113233848.1;Name=WP_113233848.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS11815;product=IS5-like element ISXo1 family transposase;protein_id=WP_113233848.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2486837 2488156 . - . ID=gene-LNP58_RS11820;Name=LNP58_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11820;old_locus_tag=LNP58_11805 NZ_CP086372.1 Protein Homology CDS 2486837 2488156 . - 0 ID=cds-WP_228329727.1;Parent=gene-LNP58_RS11820;Dbxref=Genbank:WP_228329727.1;Name=WP_228329727.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS11820;product=IS701 family transposase;protein_id=WP_228329727.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2488368 2488943 . + . ID=gene-LNP58_RS11825;Name=LNP58_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11825;old_locus_tag=LNP58_11810 NZ_CP086372.1 Protein Homology CDS 2488368 2488943 . + 0 ID=cds-WP_011409543.1;Parent=gene-LNP58_RS11825;Dbxref=Genbank:WP_011409543.1;Name=WP_011409543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157015.1;locus_tag=LNP58_RS11825;product=hypothetical protein;protein_id=WP_011409543.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2489068 2489685 . + . ID=gene-LNP58_RS11830;Name=LNP58_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11830;old_locus_tag=LNP58_11815 NZ_CP086372.1 Protein Homology CDS 2489068 2489685 . + 0 ID=cds-WP_042465763.1;Parent=gene-LNP58_RS11830;Dbxref=Genbank:WP_042465763.1;Name=WP_042465763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112508.1;locus_tag=LNP58_RS11830;product=hypothetical protein;protein_id=WP_042465763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2489728 2490526 . + . ID=gene-LNP58_RS11835;Name=LNP58_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11835;old_locus_tag=LNP58_11820 NZ_CP086372.1 Protein Homology CDS 2489728 2489999 . + 0 ID=cds-WP_109182023.1;Parent=gene-LNP58_RS11835;Dbxref=Genbank:WP_109182023.1;Name=WP_109182023.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11835;product=IS5 family transposase;protein_id=WP_109182023.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2489998 2490526 . + 1 ID=cds-WP_109182023.1;Parent=gene-LNP58_RS11835;Dbxref=Genbank:WP_109182023.1;Name=WP_109182023.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS11835;product=IS5 family transposase;protein_id=WP_109182023.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2490534 2491343 . - . ID=gene-LNP58_RS11840;Name=LNP58_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11840;old_locus_tag=LNP58_11825 NZ_CP086372.1 Protein Homology CDS 2490534 2491343 . - 0 ID=cds-WP_011260442.1;Parent=gene-LNP58_RS11840;Dbxref=Genbank:WP_011260442.1;Name=WP_011260442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089004.1;locus_tag=LNP58_RS11840;product=glycosyltransferase family 25 protein;protein_id=WP_011260442.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2491546 2492322 . + . ID=gene-LNP58_RS11845;Name=LNP58_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11845;old_locus_tag=LNP58_11830 NZ_CP086372.1 Protein Homology CDS 2491546 2492322 . + 0 ID=cds-WP_229001895.1;Parent=gene-LNP58_RS11845;Dbxref=Genbank:WP_229001895.1;Name=WP_229001895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488504.1;locus_tag=LNP58_RS11845;product=uroporphyrinogen-III synthase;protein_id=WP_229001895.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2492426 2493403 . + . ID=gene-LNP58_RS11850;Name=LNP58_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11850;old_locus_tag=LNP58_11835 NZ_CP086372.1 Protein Homology CDS 2492426 2493403 . + 0 ID=cds-WP_011409539.1;Parent=gene-LNP58_RS11850;Dbxref=Genbank:WP_011409539.1;Name=WP_011409539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488502.1;locus_tag=LNP58_RS11850;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_011409539.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2493400 2494665 . + . ID=gene-LNP58_RS11855;Name=LNP58_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11855;old_locus_tag=LNP58_11840 NZ_CP086372.1 Protein Homology CDS 2493400 2494665 . + 0 ID=cds-WP_011260439.1;Parent=gene-LNP58_RS11855;Dbxref=Genbank:WP_011260439.1;Name=WP_011260439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112149.1;locus_tag=LNP58_RS11855;product=porphyrin biosynthesis protein;protein_id=WP_011260439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2495091 2495615 . - . ID=gene-LNP58_RS11860;Name=LNP58_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11860;old_locus_tag=LNP58_11845 NZ_CP086372.1 Protein Homology CDS 2495091 2495615 . - 0 ID=cds-WP_069960017.1;Parent=gene-LNP58_RS11860;Dbxref=Genbank:WP_069960017.1;Name=WP_069960017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117625.1;locus_tag=LNP58_RS11860;product=hypothetical protein;protein_id=WP_069960017.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2495731 2497026 . - . ID=gene-LNP58_RS11865;Name=LNP58_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11865;old_locus_tag=LNP58_11850 NZ_CP086372.1 Protein Homology CDS 2495731 2497026 . - 0 ID=cds-WP_011260437.1;Parent=gene-LNP58_RS11865;Dbxref=Genbank:WP_011260437.1;Name=WP_011260437.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260437.1;locus_tag=LNP58_RS11865;product=acetyl-CoA C-acetyltransferase;protein_id=WP_011260437.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2497116 2498000 . + . ID=gene-LNP58_RS11870;Name=LNP58_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11870;old_locus_tag=LNP58_11855 NZ_CP086372.1 Protein Homology CDS 2497116 2498000 . + 0 ID=cds-WP_041182290.1;Parent=gene-LNP58_RS11870;Dbxref=Genbank:WP_041182290.1;Name=WP_041182290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992724.1;locus_tag=LNP58_RS11870;product=hypothetical protein;protein_id=WP_041182290.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2498095 2498858 . + . ID=gene-LNP58_RS11875;Name=LNP58_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11875;old_locus_tag=LNP58_11860 NZ_CP086372.1 Protein Homology CDS 2498095 2498410 . + 0 ID=cds-WP_094187715.1-4;Parent=gene-LNP58_RS11875;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11875;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2498410 2498858 . + 2 ID=cds-WP_094187715.1-4;Parent=gene-LNP58_RS11875;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS11875;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2498905 2499014 . + . ID=gene-LNP58_RS11880;Name=LNP58_RS11880;end_range=2499014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11880;old_locus_tag=LNP58_11865;partial=true;pseudo=true;start_range=.,2498905 NZ_CP086372.1 Protein Homology CDS 2498905 2499014 . + 0 ID=cds-LNP58_RS11880;Parent=gene-LNP58_RS11880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2499014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558069.1;locus_tag=LNP58_RS11880;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2498905;transl_table=11 NZ_CP086372.1 RefSeq gene 2499019 2499399 . - . ID=gene-LNP58_RS11885;Name=LNP58_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11885;old_locus_tag=LNP58_11870 NZ_CP086372.1 Protein Homology CDS 2499019 2499399 . - 0 ID=cds-WP_011260435.1;Parent=gene-LNP58_RS11885;Dbxref=Genbank:WP_011260435.1;Name=WP_011260435.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260435.1;locus_tag=LNP58_RS11885;product=SH3 domain-containing protein;protein_id=WP_011260435.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2499401 2499925 . - . ID=gene-LNP58_RS11890;Name=LNP58_RS11890;end_range=2499925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11890;old_locus_tag=LNP58_11875;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2499401 2499925 . - 0 ID=cds-LNP58_RS11890;Parent=gene-LNP58_RS11890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2499925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367996.1;locus_tag=LNP58_RS11890;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2499932 2500897 . - . ID=gene-LNP58_RS11895;Name=LNP58_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11895;old_locus_tag=LNP58_11880 NZ_CP086372.1 Protein Homology CDS 2499932 2500897 . - 0 ID=cds-WP_228329726.1;Parent=gene-LNP58_RS11895;Dbxref=Genbank:WP_228329726.1;Name=WP_228329726.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS11895;product=IS1595-like element ISXo5 family transposase;protein_id=WP_228329726.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2500986 2501537 . - . ID=gene-LNP58_RS11900;Name=LNP58_RS11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11900;old_locus_tag=LNP58_11885;partial=true;pseudo=true;start_range=.,2500986 NZ_CP086372.1 Protein Homology CDS 2500986 2501537 . - 0 ID=cds-LNP58_RS11900;Parent=gene-LNP58_RS11900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367996.1;locus_tag=LNP58_RS11900;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;start_range=.,2500986;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2501530 2502249 . - . ID=gene-LNP58_RS11905;Name=LNP58_RS11905;end_range=2502249,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11905;old_locus_tag=LNP58_11890;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2501530 2502249 . - 0 ID=cds-LNP58_RS11905;Parent=gene-LNP58_RS11905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016624;end_range=2502249,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850583.1;locus_tag=LNP58_RS11905;partial=true;product=thiamine pyrophosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2502222 2503162 . - . ID=gene-LNP58_RS11910;Name=LNP58_RS11910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11910;old_locus_tag=LNP58_11895;partial=true;pseudo=true;start_range=.,2502222 NZ_CP086372.1 Protein Homology CDS 2502222 2503162 . - 0 ID=cds-LNP58_RS11910;Parent=gene-LNP58_RS11910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575533.1;locus_tag=LNP58_RS11910;partial=true;product=lamin tail domain-containing protein;pseudo=true;start_range=.,2502222;transl_table=11 NZ_CP086372.1 RefSeq gene 2503568 2504461 . + . ID=gene-LNP58_RS11915;Name=LNP58_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11915;old_locus_tag=LNP58_11900 NZ_CP086372.1 Protein Homology CDS 2503568 2504461 . + 0 ID=cds-WP_011260428.1;Parent=gene-LNP58_RS11915;Dbxref=Genbank:WP_011260428.1;Name=WP_011260428.1;Ontology_term=GO:0019441,GO:0004833,GO:0020037;gbkey=CDS;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA,heme binding|0020037||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301448.1;locus_tag=LNP58_RS11915;product=tryptophan 2%2C3-dioxygenase family protein;protein_id=WP_011260428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2504904 2506412 . + . ID=gene-LNP58_RS11920;Name=LNP58_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11920;old_locus_tag=LNP58_11905 NZ_CP086372.1 Protein Homology CDS 2504904 2506412 . + 0 ID=cds-WP_044756377.1;Parent=gene-LNP58_RS11920;Dbxref=Genbank:WP_044756377.1;Name=WP_044756377.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509241.1;locus_tag=LNP58_RS11920;product=oligopeptide:H+ symporter;protein_id=WP_044756377.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2506424 2507014 . + . ID=gene-LNP58_RS11925;Name=LNP58_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11925;old_locus_tag=LNP58_11910 NZ_CP086372.1 Protein Homology CDS 2506424 2507014 . + 0 ID=cds-WP_011409530.1;Parent=gene-LNP58_RS11925;Dbxref=Genbank:WP_011409530.1;Name=WP_011409530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931590.1;locus_tag=LNP58_RS11925;product=thioredoxin family protein;protein_id=WP_011409530.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2507371 2507859 . - . ID=gene-LNP58_RS11930;Name=LNP58_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11930;old_locus_tag=LNP58_11915 NZ_CP086372.1 Protein Homology CDS 2507371 2507859 . - 0 ID=cds-WP_011260425.1;Parent=gene-LNP58_RS11930;Dbxref=Genbank:WP_011260425.1;Name=WP_011260425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035688.1;locus_tag=LNP58_RS11930;product=MarR family transcriptional regulator;protein_id=WP_011260425.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2507985 2509100 . + . ID=gene-LNP58_RS11935;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=LNP58_RS11935;old_locus_tag=LNP58_11920 NZ_CP086372.1 Protein Homology CDS 2507985 2509100 . + 0 ID=cds-WP_012444023.1;Parent=gene-LNP58_RS11935;Dbxref=Genbank:WP_012444023.1;Name=WP_012444023.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112910.1;locus_tag=LNP58_RS11935;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_012444023.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2509465 2510790 . + . ID=gene-LNP58_RS11940;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=LNP58_RS11940;old_locus_tag=LNP58_11925 NZ_CP086372.1 Protein Homology CDS 2509465 2510790 . + 0 ID=cds-WP_011409528.1;Parent=gene-LNP58_RS11940;Dbxref=Genbank:WP_011409528.1;Name=WP_011409528.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501682.1;locus_tag=LNP58_RS11940;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_011409528.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2511222 2512190 . - . ID=gene-LNP58_RS11945;Name=LNP58_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11945;old_locus_tag=LNP58_11930 NZ_CP086372.1 Protein Homology CDS 2511222 2512190 . - 0 ID=cds-WP_011258802.1-9;Parent=gene-LNP58_RS11945;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS11945;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2512374 2512763 . - . ID=gene-LNP58_RS11950;Name=LNP58_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11950;old_locus_tag=LNP58_11935 NZ_CP086372.1 Protein Homology CDS 2512374 2512763 . - 0 ID=cds-WP_011409527.1;Parent=gene-LNP58_RS11950;Dbxref=Genbank:WP_011409527.1;Name=WP_011409527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368014.1;locus_tag=LNP58_RS11950;product=hypothetical protein;protein_id=WP_011409527.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2513160 2513513 . - . ID=gene-LNP58_RS11955;Name=LNP58_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11955;old_locus_tag=LNP58_11940 NZ_CP086372.1 Protein Homology CDS 2513160 2513513 . - 0 ID=cds-WP_011260422.1;Parent=gene-LNP58_RS11955;Dbxref=Genbank:WP_011260422.1;Name=WP_011260422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302193.1;locus_tag=LNP58_RS11955;product=Na+/H+ antiporter subunit G;protein_id=WP_011260422.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2513510 2513794 . - . ID=gene-LNP58_RS11960;Name=LNP58_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11960;old_locus_tag=LNP58_11945 NZ_CP086372.1 Protein Homology CDS 2513510 2513794 . - 0 ID=cds-WP_011260421.1;Parent=gene-LNP58_RS11960;Dbxref=Genbank:WP_011260421.1;Name=WP_011260421.1;Ontology_term=GO:0034220,GO:0015075;gbkey=CDS;go_function=ion transmembrane transporter activity|0015075||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501684.1;locus_tag=LNP58_RS11960;product=K+/H+ antiporter subunit F;protein_id=WP_011260421.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2513791 2514297 . - . ID=gene-LNP58_RS11965;Name=LNP58_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11965;old_locus_tag=LNP58_11950 NZ_CP086372.1 Protein Homology CDS 2513791 2514297 . - 0 ID=cds-WP_044756383.1;Parent=gene-LNP58_RS11965;Dbxref=Genbank:WP_044756383.1;Name=WP_044756383.1;Ontology_term=GO:0006812,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967828.1;locus_tag=LNP58_RS11965;product=Na+/H+ antiporter subunit E;protein_id=WP_044756383.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2514294 2515838 . - . ID=gene-LNP58_RS11970;Name=LNP58_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11970;old_locus_tag=LNP58_11955 NZ_CP086372.1 Protein Homology CDS 2514294 2515838 . - 0 ID=cds-WP_069960013.1;Parent=gene-LNP58_RS11970;Dbxref=Genbank:WP_069960013.1;Name=WP_069960013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161271.1;locus_tag=LNP58_RS11970;product=monovalent cation/H+ antiporter subunit D;protein_id=WP_069960013.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2515835 2516209 . - . ID=gene-LNP58_RS11975;Name=LNP58_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11975;old_locus_tag=LNP58_11960 NZ_CP086372.1 Protein Homology CDS 2515835 2516209 . - 0 ID=cds-WP_011409523.1;Parent=gene-LNP58_RS11975;Dbxref=Genbank:WP_011409523.1;Name=WP_011409523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346152.1;locus_tag=LNP58_RS11975;product=Na+/H+ antiporter subunit C;protein_id=WP_011409523.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2516209 2519037 . - . ID=gene-LNP58_RS11980;Name=LNP58_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11980;old_locus_tag=LNP58_11965 NZ_CP086372.1 Protein Homology CDS 2516209 2519037 . - 0 ID=cds-WP_011409522.1;Parent=gene-LNP58_RS11980;Dbxref=Genbank:WP_011409522.1;Name=WP_011409522.1;Ontology_term=GO:0098662,GO:0005451;gbkey=CDS;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302198.1;locus_tag=LNP58_RS11980;product=monovalent cation/H+ antiporter subunit A;protein_id=WP_011409522.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2519576 2520061 . - . ID=gene-LNP58_RS11985;Name=LNP58_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11985;old_locus_tag=LNP58_11970 NZ_CP086372.1 Protein Homology CDS 2519576 2520061 . - 0 ID=cds-WP_011409520.1;Parent=gene-LNP58_RS11985;Dbxref=Genbank:WP_011409520.1;Name=WP_011409520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575562.1;locus_tag=LNP58_RS11985;product=DUF962 domain-containing protein;protein_id=WP_011409520.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2520203 2521755 . - . ID=gene-LNP58_RS11990;Name=LNP58_RS11990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS11990;old_locus_tag=LNP58_11975;pseudo=true NZ_CP086372.1 Protein Homology CDS 2520203 2521755 . - 0 ID=cds-LNP58_RS11990;Parent=gene-LNP58_RS11990;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1;locus_tag=LNP58_RS11990;product=M4 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2522184 2522567 . - . ID=gene-LNP58_RS11995;Name=LNP58_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS11995;old_locus_tag=LNP58_11980 NZ_CP086372.1 GeneMarkS-2+ CDS 2522184 2522567 . - 0 ID=cds-WP_011409517.1;Parent=gene-LNP58_RS11995;Dbxref=Genbank:WP_011409517.1;Name=WP_011409517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS11995;product=hypothetical protein;protein_id=WP_011409517.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2522579 2523256 . - . ID=gene-LNP58_RS12000;Name=LNP58_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12000;old_locus_tag=LNP58_11985 NZ_CP086372.1 Protein Homology CDS 2522579 2523256 . - 0 ID=cds-WP_044757306.1;Parent=gene-LNP58_RS12000;Dbxref=Genbank:WP_044757306.1;Name=WP_044757306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113468.1;locus_tag=LNP58_RS12000;product=NYN domain-containing protein;protein_id=WP_044757306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2523730 2524656 . - . ID=gene-LNP58_RS12005;Name=LNP58_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12005;old_locus_tag=LNP58_11990 NZ_CP086372.1 Protein Homology CDS 2523730 2524656 . - 0 ID=cds-WP_012444032.1;Parent=gene-LNP58_RS12005;Dbxref=Genbank:WP_012444032.1;Name=WP_012444032.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1;locus_tag=LNP58_RS12005;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_012444032.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2524865 2525194 . + . ID=gene-LNP58_RS12010;Name=LNP58_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12010;old_locus_tag=LNP58_11995 NZ_CP086372.1 Protein Homology CDS 2524865 2525194 . + 0 ID=cds-WP_011409516.1;Parent=gene-LNP58_RS12010;Dbxref=Genbank:WP_011409516.1;Name=WP_011409516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1;locus_tag=LNP58_RS12010;product=DnaJ domain-containing protein;protein_id=WP_011409516.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2525559 2526260 . + . ID=gene-LNP58_RS12015;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LNP58_RS12015;old_locus_tag=LNP58_12000 NZ_CP086372.1 Protein Homology CDS 2525559 2526260 . + 0 ID=cds-WP_011409515.1;Parent=gene-LNP58_RS12015;Dbxref=Genbank:WP_011409515.1;Name=WP_011409515.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164154.1;locus_tag=LNP58_RS12015;product=ribulose-phosphate 3-epimerase;protein_id=WP_011409515.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2526257 2526748 . + . ID=gene-LNP58_RS12020;Name=LNP58_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12020;old_locus_tag=LNP58_12005 NZ_CP086372.1 Protein Homology CDS 2526257 2526748 . + 0 ID=cds-WP_011260409.1;Parent=gene-LNP58_RS12020;Dbxref=Genbank:WP_011260409.1;Name=WP_011260409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368051.1;locus_tag=LNP58_RS12020;product=GNAT family N-acetyltransferase;protein_id=WP_011260409.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2526983 2527912 . + . ID=gene-LNP58_RS12025;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=LNP58_RS12025;old_locus_tag=LNP58_12010 NZ_CP086372.1 Protein Homology CDS 2526983 2527912 . + 0 ID=cds-WP_011260408.1;Parent=gene-LNP58_RS12025;Dbxref=Genbank:WP_011260408.1;Name=WP_011260408.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260408.1;locus_tag=LNP58_RS12025;product=lipid kinase YegS;protein_id=WP_011260408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2528573 2530048 . + . ID=gene-LNP58_RS12030;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LNP58_RS12030;old_locus_tag=LNP58_12015 NZ_CP086372.1 Protein Homology CDS 2528573 2530048 . + 0 ID=cds-WP_011409514.1;Parent=gene-LNP58_RS12030;Dbxref=Genbank:WP_011409514.1;Name=WP_011409514.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1;locus_tag=LNP58_RS12030;product=anthranilate synthase component I;protein_id=WP_011409514.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2530023 2530931 . + . ID=gene-LNP58_RS12035;Name=LNP58_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12035;old_locus_tag=LNP58_12020 NZ_CP086372.1 Protein Homology CDS 2530023 2530931 . + 0 ID=cds-WP_075240638.1;Parent=gene-LNP58_RS12035;Dbxref=Genbank:WP_075240638.1;Name=WP_075240638.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409513.1;locus_tag=LNP58_RS12035;product=beta-eliminating lyase-related protein;protein_id=WP_075240638.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2531040 2532081 . + . ID=gene-LNP58_RS12040;Name=LNP58_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12040;old_locus_tag=LNP58_12025;pseudo=true NZ_CP086372.1 Protein Homology CDS 2531040 2532081 . + 0 ID=cds-LNP58_RS12040;Parent=gene-LNP58_RS12040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS12040;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2532289 2532876 . + . ID=gene-LNP58_RS12045;Name=LNP58_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12045;old_locus_tag=LNP58_12030 NZ_CP086372.1 Protein Homology CDS 2532289 2532876 . + 0 ID=cds-WP_228329747.1;Parent=gene-LNP58_RS12045;Dbxref=Genbank:WP_228329747.1;Name=WP_228329747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114900.1;locus_tag=LNP58_RS12045;product=hypothetical protein;protein_id=WP_228329747.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2533224 2534807 . - . ID=gene-LNP58_RS12050;Name=LNP58_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12050;old_locus_tag=LNP58_12035 NZ_CP086372.1 Protein Homology CDS 2533224 2534807 . - 0 ID=cds-WP_011260404.1;Parent=gene-LNP58_RS12050;Dbxref=Genbank:WP_011260404.1;Name=WP_011260404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923743.1;locus_tag=LNP58_RS12050;product=SDR family oxidoreductase;protein_id=WP_011260404.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2535047 2535122 . - . ID=gene-LNP58_RS12055;Name=LNP58_RS12055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12055;old_locus_tag=LNP58_12040 NZ_CP086372.1 cmsearch ncRNA 2535047 2535122 . - . ID=rna-LNP58_RS12055;Parent=gene-LNP58_RS12055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12055;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2535047 2535122 . - . ID=exon-LNP58_RS12055-1;Parent=rna-LNP58_RS12055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12055;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2535198 2535404 . - . ID=gene-LNP58_RS12060;Name=LNP58_RS12060;end_range=2535404,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12060;old_locus_tag=LNP58_12045;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2535198 2535404 . - 0 ID=cds-LNP58_RS12060;Parent=gene-LNP58_RS12060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2535404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972686.1;locus_tag=LNP58_RS12060;partial=true;product=DUF4126 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2535401 2535574 . - . ID=gene-LNP58_RS12065;Name=LNP58_RS12065;end_range=2535574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12065;old_locus_tag=LNP58_12050;partial=true;pseudo=true;start_range=.,2535401 NZ_CP086372.1 Protein Homology CDS 2535401 2535574 . - 0 ID=cds-LNP58_RS12065;Parent=gene-LNP58_RS12065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2535574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1;locus_tag=LNP58_RS12065;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2535401;transl_table=11 NZ_CP086372.1 RefSeq gene 2535764 2537710 . + . ID=gene-LNP58_RS12070;Name=LNP58_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12070;old_locus_tag=LNP58_12055 NZ_CP086372.1 Protein Homology CDS 2535764 2537710 . + 0 ID=cds-WP_069960011.1;Parent=gene-LNP58_RS12070;Dbxref=Genbank:WP_069960011.1;Name=WP_069960011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409508.1;locus_tag=LNP58_RS12070;product=S9 family peptidase;protein_id=WP_069960011.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2537770 2537836 . + . ID=gene-LNP58_RS12075;Name=LNP58_RS12075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12075;old_locus_tag=LNP58_12060 NZ_CP086372.1 cmsearch ncRNA 2537770 2537836 . + . ID=rna-LNP58_RS12075;Parent=gene-LNP58_RS12075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12075;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2537770 2537836 . + . ID=exon-LNP58_RS12075-1;Parent=rna-LNP58_RS12075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12075;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2537906 2540230 . - . ID=gene-LNP58_RS12080;Name=LNP58_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12080;old_locus_tag=LNP58_12065 NZ_CP086372.1 Protein Homology CDS 2537906 2540230 . - 0 ID=cds-WP_011409507.1;Parent=gene-LNP58_RS12080;Dbxref=Genbank:WP_011409507.1;Name=WP_011409507.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158410.1;locus_tag=LNP58_RS12080;product=S9 family peptidase;protein_id=WP_011409507.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2540650 2542082 . + . ID=gene-LNP58_RS12085;Name=LNP58_RS12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12085;old_locus_tag=LNP58_12070;pseudo=true NZ_CP086372.1 Protein Homology CDS 2540650 2542082 . + 0 ID=cds-LNP58_RS12085;Parent=gene-LNP58_RS12085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155515.1;locus_tag=LNP58_RS12085;product=GAD-like domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2542133 2543224 . - . ID=gene-LNP58_RS12090;Name=LNP58_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12090;old_locus_tag=LNP58_12075 NZ_CP086372.1 Protein Homology CDS 2542133 2543224 . - 0 ID=cds-WP_075242247.1;Parent=gene-LNP58_RS12090;Dbxref=Genbank:WP_075242247.1;Name=WP_075242247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915468.1;locus_tag=LNP58_RS12090;product=DUF1615 domain-containing protein;protein_id=WP_075242247.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2543600 2544621 . - . ID=gene-LNP58_RS12095;Name=LNP58_RS12095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12095;old_locus_tag=LNP58_12080;pseudo=true NZ_CP086372.1 Protein Homology CDS 2543600 2544621 . - 0 ID=cds-LNP58_RS12095;Parent=gene-LNP58_RS12095;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS12095;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2544570 2545172 . - . ID=gene-LNP58_RS12100;Name=LNP58_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12100;old_locus_tag=LNP58_12085 NZ_CP086372.1 Protein Homology CDS 2544570 2545172 . - 0 ID=cds-WP_011260397.1;Parent=gene-LNP58_RS12100;Dbxref=Genbank:WP_011260397.1;Name=WP_011260397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448615.1;locus_tag=LNP58_RS12100;product=hypothetical protein;protein_id=WP_011260397.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2545264 2546172 . - . ID=gene-LNP58_RS12105;Name=LNP58_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12105;old_locus_tag=LNP58_12090 NZ_CP086372.1 Protein Homology CDS 2545264 2546172 . - 0 ID=cds-WP_228329724.1;Parent=gene-LNP58_RS12105;Dbxref=Genbank:WP_228329724.1;Name=WP_228329724.1;Ontology_term=GO:0016645;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966052.1;locus_tag=LNP58_RS12105;product=MnmC family methyltransferase;protein_id=WP_228329724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2546340 2547215 . + . ID=gene-LNP58_RS12110;Name=LNP58_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12110;old_locus_tag=LNP58_12095 NZ_CP086372.1 Protein Homology CDS 2546340 2547215 . + 0 ID=cds-WP_011409500.1;Parent=gene-LNP58_RS12110;Dbxref=Genbank:WP_011409500.1;Name=WP_011409500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159126.1;locus_tag=LNP58_RS12110;product=DMT family transporter;protein_id=WP_011409500.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2547491 2549263 . - . ID=gene-LNP58_RS12115;Name=LNP58_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12115;old_locus_tag=LNP58_12100 NZ_CP086372.1 Protein Homology CDS 2547491 2549263 . - 0 ID=cds-WP_075242248.1;Parent=gene-LNP58_RS12115;Dbxref=Genbank:WP_075242248.1;Name=WP_075242248.1;Ontology_term=GO:0030248;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501805.1;locus_tag=LNP58_RS12115;product=expansin EXLX1 family cellulose-binding protein;protein_id=WP_075242248.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2549508 2549633 . - . ID=gene-LNP58_RS23425;Name=LNP58_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23425 NZ_CP086372.1 GeneMarkS-2+ CDS 2549508 2549633 . - 0 ID=cds-WP_257791318.1;Parent=gene-LNP58_RS23425;Dbxref=Genbank:WP_257791318.1;Name=WP_257791318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23425;product=hypothetical protein;protein_id=WP_257791318.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2549672 2551318 . - . ID=gene-LNP58_RS12120;Name=LNP58_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12120;old_locus_tag=LNP58_12105 NZ_CP086372.1 Protein Homology CDS 2549672 2551318 . - 0 ID=cds-WP_162828859.1;Parent=gene-LNP58_RS12120;Dbxref=Genbank:WP_162828859.1;Name=WP_162828859.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444046.1;locus_tag=LNP58_RS12120;product=glycoside hydrolase family 6 protein;protein_id=WP_162828859.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2551529 2551863 . + . ID=gene-LNP58_RS12125;Name=LNP58_RS12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12125;old_locus_tag=LNP58_12110;pseudo=true NZ_CP086372.1 Protein Homology CDS 2551529 2551863 . + 0 ID=cds-LNP58_RS12125;Parent=gene-LNP58_RS12125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155503.1;locus_tag=LNP58_RS12125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2552485 2553915 . + . ID=gene-LNP58_RS12130;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=LNP58_RS12130;old_locus_tag=LNP58_12115 NZ_CP086372.1 Protein Homology CDS 2552485 2553915 . + 0 ID=cds-WP_173425348.1;Parent=gene-LNP58_RS12130;Dbxref=Genbank:WP_173425348.1;Name=WP_173425348.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167467.1;locus_tag=LNP58_RS12130;product=D-serine/D-alanine/glycine transporter;protein_id=WP_173425348.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2554009 2555004 . - . ID=gene-LNP58_RS12135;Name=LNP58_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12135;old_locus_tag=LNP58_12120 NZ_CP086372.1 Protein Homology CDS 2554009 2555004 . - 0 ID=cds-WP_027703842.1;Parent=gene-LNP58_RS12135;Dbxref=Genbank:WP_027703842.1;Name=WP_027703842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155501.1;locus_tag=LNP58_RS12135;product=XopV/AopV family type III secretion system effector;protein_id=WP_027703842.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2555250 2556161 . + . ID=gene-LNP58_RS12140;Name=LNP58_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12140;old_locus_tag=LNP58_12125 NZ_CP086372.1 Protein Homology CDS 2555250 2556161 . + 0 ID=cds-WP_027703841.1;Parent=gene-LNP58_RS12140;Dbxref=Genbank:WP_027703841.1;Name=WP_027703841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501814.1;locus_tag=LNP58_RS12140;product=magnesium transporter;protein_id=WP_027703841.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2556365 2556637 . - . ID=gene-LNP58_RS12145;Name=LNP58_RS12145;end_range=2556637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12145;old_locus_tag=LNP58_12130;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2556365 2556637 . - 0 ID=cds-LNP58_RS12145;Parent=gene-LNP58_RS12145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2556637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448601.1;locus_tag=LNP58_RS12145;partial=true;product=AIM24 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2556756 2557040 . - . ID=gene-LNP58_RS12150;Name=LNP58_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12150;old_locus_tag=LNP58_12135 NZ_CP086372.1 Protein Homology CDS 2556756 2557040 . - 0 ID=cds-WP_012444053.1;Parent=gene-LNP58_RS12150;Dbxref=Genbank:WP_012444053.1;Name=WP_012444053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=LNP58_RS12150;product=hypothetical protein;protein_id=WP_012444053.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2557371 2557817 . + . ID=gene-LNP58_RS12155;Name=LNP58_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12155;old_locus_tag=LNP58_12140 NZ_CP086372.1 Protein Homology CDS 2557371 2557817 . + 0 ID=cds-WP_011409497.1;Parent=gene-LNP58_RS12155;Dbxref=Genbank:WP_011409497.1;Name=WP_011409497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158413.1;locus_tag=LNP58_RS12155;product=avidin/streptavidin family protein;protein_id=WP_011409497.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2558361 2560034 . - . ID=gene-LNP58_RS12160;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LNP58_RS12160;old_locus_tag=LNP58_12145 NZ_CP086372.1 Protein Homology CDS 2558361 2560034 . - 0 ID=cds-WP_011260388.1;Parent=gene-LNP58_RS12160;Dbxref=Genbank:WP_011260388.1;Name=WP_011260388.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167145.1;locus_tag=LNP58_RS12160;product=alpha%2Calpha-trehalase TreA;protein_id=WP_011260388.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2560288 2561073 . - . ID=gene-LNP58_RS12165;Name=LNP58_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12165;old_locus_tag=LNP58_12150 NZ_CP086372.1 Protein Homology CDS 2560288 2561073 . - 0 ID=cds-WP_027704042.1;Parent=gene-LNP58_RS12165;Dbxref=Genbank:WP_027704042.1;Name=WP_027704042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902976.1;locus_tag=LNP58_RS12165;product=DUF72 domain-containing protein;protein_id=WP_027704042.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2561173 2561925 . + . ID=gene-LNP58_RS12170;Name=LNP58_RS12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12170;old_locus_tag=LNP58_12155;pseudo=true NZ_CP086372.1 Protein Homology CDS 2561173 2561925 . + 0 ID=cds-LNP58_RS12170;Parent=gene-LNP58_RS12170;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160053.1;locus_tag=LNP58_RS12170;product=endonuclease;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2562121 2562884 . + . ID=gene-LNP58_RS12175;Name=LNP58_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12175;old_locus_tag=LNP58_12160 NZ_CP086372.1 Protein Homology CDS 2562121 2562436 . + 0 ID=cds-WP_109181887.1;Parent=gene-LNP58_RS12175;Dbxref=Genbank:WP_109181887.1;Name=WP_109181887.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12175;product=IS5 family transposase;protein_id=WP_109181887.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2562436 2562884 . + 2 ID=cds-WP_109181887.1;Parent=gene-LNP58_RS12175;Dbxref=Genbank:WP_109181887.1;Name=WP_109181887.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12175;product=IS5 family transposase;protein_id=WP_109181887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2563137 2564141 . + . ID=gene-LNP58_RS12180;Name=LNP58_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12180;old_locus_tag=LNP58_12165 NZ_CP086372.1 Protein Homology CDS 2563137 2564141 . + 0 ID=cds-WP_069960008.1;Parent=gene-LNP58_RS12180;Dbxref=Genbank:WP_069960008.1;Name=WP_069960008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376082.1;locus_tag=LNP58_RS12180;product=hypothetical protein;protein_id=WP_069960008.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2564180 2565109 . - . ID=gene-LNP58_RS12185;Name=LNP58_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12185;old_locus_tag=LNP58_12170 NZ_CP086372.1 Protein Homology CDS 2564180 2565109 . - 0 ID=cds-WP_069960007.1;Parent=gene-LNP58_RS12185;Dbxref=Genbank:WP_069960007.1;Name=WP_069960007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118451.1;locus_tag=LNP58_RS12185;product=GAF domain-containing protein;protein_id=WP_069960007.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2565657 2568527 . - . ID=gene-LNP58_RS12190;Name=LNP58_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12190;old_locus_tag=LNP58_12175 NZ_CP086372.1 Protein Homology CDS 2565657 2568527 . - 0 ID=cds-WP_229001896.1;Parent=gene-LNP58_RS12190;Dbxref=Genbank:WP_229001896.1;Name=WP_229001896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260383.1;locus_tag=LNP58_RS12190;product=pitrilysin family protein;protein_id=WP_229001896.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2568784 2571408 . + . ID=gene-LNP58_RS12195;Name=LNP58_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12195;old_locus_tag=LNP58_12180 NZ_CP086372.1 Protein Homology CDS 2568784 2571408 . + 0 ID=cds-WP_069964603.1;Parent=gene-LNP58_RS12195;Dbxref=Genbank:WP_069964603.1;Name=WP_069964603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409492.1;locus_tag=LNP58_RS12195;product=PAS domain S-box protein;protein_id=WP_069964603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2571853 2571929 . + . ID=gene-LNP58_RS12200;Name=LNP58_RS12200;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12200;old_locus_tag=LNP58_12185 NZ_CP086372.1 cmsearch ncRNA 2571853 2571929 . + . ID=rna-LNP58_RS12200;Parent=gene-LNP58_RS12200;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12200;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2571853 2571929 . + . ID=exon-LNP58_RS12200-1;Parent=rna-LNP58_RS12200;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12200;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2571934 2572307 . - . ID=gene-LNP58_RS12205;Name=LNP58_RS12205;end_range=2572307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12205;old_locus_tag=LNP58_12190;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2571934 2572307 . - 0 ID=cds-LNP58_RS12205;Parent=gene-LNP58_RS12205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2572307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472611.1;locus_tag=LNP58_RS12205;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2572643 2574097 . - . ID=gene-LNP58_RS12210;Name=LNP58_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12210;old_locus_tag=LNP58_12195 NZ_CP086372.1 Protein Homology CDS 2572643 2574097 . - 0 ID=cds-WP_069963930.1;Parent=gene-LNP58_RS12210;Dbxref=Genbank:WP_069963930.1;Name=WP_069963930.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409490.1;locus_tag=LNP58_RS12210;product=glycoside hydrolase family 5 protein;protein_id=WP_069963930.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2574305 2575792 . + . ID=gene-LNP58_RS12215;Name=LNP58_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12215;old_locus_tag=LNP58_12200 NZ_CP086372.1 Protein Homology CDS 2574305 2575792 . + 0 ID=cds-WP_011409489.1;Parent=gene-LNP58_RS12215;Dbxref=Genbank:WP_011409489.1;Name=WP_011409489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116599.1;locus_tag=LNP58_RS12215;product=SulP family inorganic anion transporter;protein_id=WP_011409489.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2576035 2577014 . + . ID=gene-LNP58_RS12220;Name=LNP58_RS12220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12220;old_locus_tag=LNP58_12205;pseudo=true NZ_CP086372.1 Protein Homology CDS 2576035 2577014 . + 0 ID=cds-LNP58_RS12220;Parent=gene-LNP58_RS12220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462838.1;locus_tag=LNP58_RS12220;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2577183 2578832 . + . ID=gene-LNP58_RS12225;Name=LNP58_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12225;old_locus_tag=LNP58_12210 NZ_CP086372.1 Protein Homology CDS 2577183 2578832 . + 0 ID=cds-WP_011260378.1;Parent=gene-LNP58_RS12225;Dbxref=Genbank:WP_011260378.1;Name=WP_011260378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489719.1;locus_tag=LNP58_RS12225;product=M28 family metallopeptidase;protein_id=WP_011260378.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2579146 2579909 . - . ID=gene-LNP58_RS12230;Name=LNP58_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12230;old_locus_tag=LNP58_12215 NZ_CP086372.1 Protein Homology CDS 2579594 2579909 . - 0 ID=cds-WP_094187780.1;Parent=gene-LNP58_RS12230;Dbxref=Genbank:WP_094187780.1;Name=WP_094187780.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12230;product=IS5 family transposase;protein_id=WP_094187780.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2579146 2579594 . - 2 ID=cds-WP_094187780.1;Parent=gene-LNP58_RS12230;Dbxref=Genbank:WP_094187780.1;Name=WP_094187780.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12230;product=IS5 family transposase;protein_id=WP_094187780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2580088 2580164 . + . ID=gene-LNP58_RS12235;Name=LNP58_RS12235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12235;old_locus_tag=LNP58_12220 NZ_CP086372.1 cmsearch ncRNA 2580088 2580164 . + . ID=rna-LNP58_RS12235;Parent=gene-LNP58_RS12235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12235;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2580088 2580164 . + . ID=exon-LNP58_RS12235-1;Parent=rna-LNP58_RS12235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12235;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2580636 2582573 . + . ID=gene-LNP58_RS12240;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LNP58_RS12240;old_locus_tag=LNP58_12225 NZ_CP086372.1 Protein Homology CDS 2580636 2582573 . + 0 ID=cds-WP_033013308.1;Parent=gene-LNP58_RS12240;Dbxref=Genbank:WP_033013308.1;Name=WP_033013308.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915513.1;locus_tag=LNP58_RS12240;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_033013308.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2582725 2583393 . + . ID=gene-LNP58_RS12245;Name=LNP58_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12245;old_locus_tag=LNP58_12230 NZ_CP086372.1 Protein Homology CDS 2582725 2583393 . + 0 ID=cds-WP_044756406.1;Parent=gene-LNP58_RS12245;Dbxref=Genbank:WP_044756406.1;Name=WP_044756406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050437.1;locus_tag=LNP58_RS12245;product=alpha/beta hydrolase;protein_id=WP_044756406.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2583398 2584450 . + . ID=gene-LNP58_RS12250;Name=LNP58_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12250;old_locus_tag=LNP58_12235 NZ_CP086372.1 Protein Homology CDS 2583398 2584450 . + 0 ID=cds-WP_011260375.1;Parent=gene-LNP58_RS12250;Dbxref=Genbank:WP_011260375.1;Name=WP_011260375.1;Ontology_term=GO:0000160,GO:0000155,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409486.1;locus_tag=LNP58_RS12250;product=histidine kinase;protein_id=WP_011260375.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2584481 2585218 . + . ID=gene-LNP58_RS12255;Name=LNP58_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12255;old_locus_tag=LNP58_12240 NZ_CP086372.1 Protein Homology CDS 2584481 2585218 . + 0 ID=cds-WP_011409485.1;Parent=gene-LNP58_RS12255;Dbxref=Genbank:WP_011409485.1;Name=WP_011409485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915517.1;locus_tag=LNP58_RS12255;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_011409485.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2585249 2586163 . + . ID=gene-LNP58_RS12260;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LNP58_RS12260;old_locus_tag=LNP58_12245 NZ_CP086372.1 Protein Homology CDS 2585249 2586163 . + 0 ID=cds-WP_011409484.1;Parent=gene-LNP58_RS12260;Dbxref=Genbank:WP_011409484.1;Name=WP_011409484.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155437.1;locus_tag=LNP58_RS12260;product=hydroxymethylbilane synthase;protein_id=WP_011409484.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2586714 2587514 . - . ID=gene-LNP58_RS12265;Name=LNP58_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12265;old_locus_tag=LNP58_12250 NZ_CP086372.1 Protein Homology CDS 2586714 2587514 . - 0 ID=cds-WP_011260372.1;Parent=gene-LNP58_RS12265;Dbxref=Genbank:WP_011260372.1;Name=WP_011260372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302001.1;locus_tag=LNP58_RS12265;product=DUF481 domain-containing protein;protein_id=WP_011260372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2588073 2589038 . + . ID=gene-LNP58_RS12270;Name=LNP58_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12270;old_locus_tag=LNP58_12255 NZ_CP086372.1 Protein Homology CDS 2588073 2589038 . + 0 ID=cds-WP_011260371.1;Parent=gene-LNP58_RS12270;Dbxref=Genbank:WP_011260371.1;Name=WP_011260371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451607.1;locus_tag=LNP58_RS12270;product=YafY family protein;protein_id=WP_011260371.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2589147 2589716 . - . ID=gene-LNP58_RS12275;Name=LNP58_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12275;old_locus_tag=LNP58_12260 NZ_CP086372.1 Protein Homology CDS 2589147 2589716 . - 0 ID=cds-WP_011260370.1;Parent=gene-LNP58_RS12275;Dbxref=Genbank:WP_011260370.1;Name=WP_011260370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368302.1;locus_tag=LNP58_RS12275;product=lipocalin family protein;protein_id=WP_011260370.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2590104 2590415 . + . ID=gene-LNP58_RS12280;Name=LNP58_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12280;old_locus_tag=LNP58_12265 NZ_CP086372.1 Protein Homology CDS 2590104 2590415 . + 0 ID=cds-WP_011409482.1;Parent=gene-LNP58_RS12280;Dbxref=Genbank:WP_011409482.1;Name=WP_011409482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368301.1;locus_tag=LNP58_RS12280;product=hypothetical protein;protein_id=WP_011409482.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2590483 2592576 . + . ID=gene-LNP58_RS12285;Name=LNP58_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12285;old_locus_tag=LNP58_12270 NZ_CP086372.1 Protein Homology CDS 2590483 2592576 . + 0 ID=cds-WP_011409481.1;Parent=gene-LNP58_RS12285;Dbxref=Genbank:WP_011409481.1;Name=WP_011409481.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903637.1;locus_tag=LNP58_RS12285;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_011409481.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2592650 2593090 . + . ID=gene-LNP58_RS12290;Name=LNP58_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12290;old_locus_tag=LNP58_12275 NZ_CP086372.1 GeneMarkS-2+ CDS 2592650 2593090 . + 0 ID=cds-WP_103073476.1;Parent=gene-LNP58_RS12290;Dbxref=Genbank:WP_103073476.1;Name=WP_103073476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS12290;product=hypothetical protein;protein_id=WP_103073476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2593082 2593142 . + . ID=gene-LNP58_RS12295;Name=LNP58_RS12295;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12295;old_locus_tag=LNP58_12280 NZ_CP086372.1 cmsearch ncRNA 2593082 2593142 . + . ID=rna-LNP58_RS12295;Parent=gene-LNP58_RS12295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12295;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2593082 2593142 . + . ID=exon-LNP58_RS12295-1;Parent=rna-LNP58_RS12295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12295;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2593416 2594600 . - . ID=gene-LNP58_RS12300;Name=LNP58_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12300;old_locus_tag=LNP58_12285 NZ_CP086372.1 Protein Homology CDS 2593416 2594600 . - 0 ID=cds-WP_075242329.1;Parent=gene-LNP58_RS12300;Dbxref=Genbank:WP_075242329.1;Name=WP_075242329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155429.1;locus_tag=LNP58_RS12300;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_075242329.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2594724 2596859 . + . ID=gene-LNP58_RS12305;Name=LNP58_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12305;old_locus_tag=LNP58_12290 NZ_CP086372.1 Protein Homology CDS 2594724 2596859 . + 0 ID=cds-WP_027703683.1;Parent=gene-LNP58_RS12305;Dbxref=Genbank:WP_027703683.1;Name=WP_027703683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501853.1;locus_tag=LNP58_RS12305;product=oligopeptidase B;protein_id=WP_027703683.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2597232 2597630 . + . ID=gene-LNP58_RS12310;Name=LNP58_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12310;old_locus_tag=LNP58_12295 NZ_CP086372.1 Protein Homology CDS 2597232 2597630 . + 0 ID=cds-WP_011409478.1;Parent=gene-LNP58_RS12310;Dbxref=Genbank:WP_011409478.1;Name=WP_011409478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965023.1;locus_tag=LNP58_RS12310;product=YbaN family protein;protein_id=WP_011409478.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2597688 2597924 . + . ID=gene-LNP58_RS12315;Name=LNP58_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12315;old_locus_tag=LNP58_12300 NZ_CP086372.1 Protein Homology CDS 2597688 2597924 . + 0 ID=cds-WP_011409477.1;Parent=gene-LNP58_RS12315;Dbxref=Genbank:WP_011409477.1;Name=WP_011409477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155427.1;locus_tag=LNP58_RS12315;product=lipoprotein;protein_id=WP_011409477.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2597914 2598768 . + . ID=gene-LNP58_RS12320;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LNP58_RS12320;old_locus_tag=LNP58_12305 NZ_CP086372.1 Protein Homology CDS 2597914 2598768 . + 0 ID=cds-WP_011260363.1;Parent=gene-LNP58_RS12320;Dbxref=Genbank:WP_011260363.1;Name=WP_011260363.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260363.1;locus_tag=LNP58_RS12320;product=diaminopimelate epimerase;protein_id=WP_011260363.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2598765 2599436 . + . ID=gene-LNP58_RS12325;Name=LNP58_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12325;old_locus_tag=LNP58_12310 NZ_CP086372.1 Protein Homology CDS 2598765 2599436 . + 0 ID=cds-WP_011409476.1;Parent=gene-LNP58_RS12325;Dbxref=Genbank:WP_011409476.1;Name=WP_011409476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482765.1;locus_tag=LNP58_RS12325;product=DUF484 family protein;protein_id=WP_011409476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2599636 2600553 . + . ID=gene-LNP58_RS12330;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LNP58_RS12330;old_locus_tag=LNP58_12315 NZ_CP086372.1 Protein Homology CDS 2599636 2600553 . + 0 ID=cds-WP_011409475.1;Parent=gene-LNP58_RS12330;Dbxref=Genbank:WP_011409475.1;Name=WP_011409475.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173863.1;locus_tag=LNP58_RS12330;product=tyrosine recombinase XerC;protein_id=WP_011409475.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2600835 2600911 . + . ID=gene-LNP58_RS12335;Name=LNP58_RS12335;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12335;old_locus_tag=LNP58_12320 NZ_CP086372.1 cmsearch ncRNA 2600835 2600911 . + . ID=rna-LNP58_RS12335;Parent=gene-LNP58_RS12335;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12335;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2600835 2600911 . + . ID=exon-LNP58_RS12335-1;Parent=rna-LNP58_RS12335;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12335;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2601069 2601620 . + . ID=gene-LNP58_RS12340;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LNP58_RS12340;old_locus_tag=LNP58_12325 NZ_CP086372.1 Protein Homology CDS 2601069 2601620 . + 0 ID=cds-WP_011260360.1;Parent=gene-LNP58_RS12340;Dbxref=Genbank:WP_011260360.1;Name=WP_011260360.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=LNP58_RS12340;product=ATP-dependent protease subunit HslV;protein_id=WP_011260360.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2601731 2603098 . + . ID=gene-LNP58_RS12345;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LNP58_RS12345;old_locus_tag=LNP58_12330 NZ_CP086372.1 Protein Homology CDS 2601731 2603098 . + 0 ID=cds-WP_011260359.1;Parent=gene-LNP58_RS12345;Dbxref=Genbank:WP_011260359.1;Name=WP_011260359.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804707.1;locus_tag=LNP58_RS12345;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_011260359.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2603272 2603886 . - . ID=gene-LNP58_RS12350;Name=LNP58_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12350;old_locus_tag=LNP58_12335 NZ_CP086372.1 Protein Homology CDS 2603272 2603886 . - 0 ID=cds-WP_041182583.1;Parent=gene-LNP58_RS12350;Dbxref=Genbank:WP_041182583.1;Name=WP_041182583.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577294.1;locus_tag=LNP58_RS12350;product=HAD-IA family hydrolase;protein_id=WP_041182583.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2604195 2604914 . - . ID=gene-LNP58_RS12355;Name=LNP58_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12355;old_locus_tag=LNP58_12340 NZ_CP086372.1 Protein Homology CDS 2604195 2604914 . - 0 ID=cds-WP_011409473.1;Parent=gene-LNP58_RS12355;Dbxref=Genbank:WP_011409473.1;Name=WP_011409473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804719.1;locus_tag=LNP58_RS12355;product=hypothetical protein;protein_id=WP_011409473.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2605086 2607098 . - . ID=gene-LNP58_RS12360;Name=LNP58_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12360;old_locus_tag=LNP58_12345 NZ_CP086372.1 Protein Homology CDS 2605086 2607098 . - 0 ID=cds-WP_011409472.1;Parent=gene-LNP58_RS12360;Dbxref=Genbank:WP_011409472.1;Name=WP_011409472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162760.1;locus_tag=LNP58_RS12360;product=M1 family metallopeptidase;protein_id=WP_011409472.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2607220 2608110 . - . ID=gene-LNP58_RS12365;Name=LNP58_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12365;old_locus_tag=LNP58_12350 NZ_CP086372.1 Protein Homology CDS 2607220 2608110 . - 0 ID=cds-WP_011409471.1;Parent=gene-LNP58_RS12365;Dbxref=Genbank:WP_011409471.1;Name=WP_011409471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302598.1;locus_tag=LNP58_RS12365;product=GGDEF domain-containing protein;protein_id=WP_011409471.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2608283 2609044 . - . ID=gene-LNP58_RS12370;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LNP58_RS12370;old_locus_tag=LNP58_12355 NZ_CP086372.1 Protein Homology CDS 2608283 2609044 . - 0 ID=cds-WP_011409470.1;Parent=gene-LNP58_RS12370;Dbxref=Genbank:WP_011409470.1;Name=WP_011409470.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303204.1;locus_tag=LNP58_RS12370;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_011409470.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2609074 2610786 . + . ID=gene-LNP58_RS12375;Name=LNP58_RS12375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12375;old_locus_tag=LNP58_12360;pseudo=true NZ_CP086372.1 Protein Homology CDS 2609074 2610786 . + 0 ID=cds-LNP58_RS12375;Parent=gene-LNP58_RS12375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038582.1;locus_tag=LNP58_RS12375;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2610783 2611859 . + . ID=gene-LNP58_RS12380;Name=LNP58_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12380;old_locus_tag=LNP58_12365 NZ_CP086372.1 Protein Homology CDS 2610783 2611859 . + 0 ID=cds-WP_069960004.1;Parent=gene-LNP58_RS12380;Dbxref=Genbank:WP_069960004.1;Name=WP_069960004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482758.1;locus_tag=LNP58_RS12380;product=HlyD family secretion protein;protein_id=WP_069960004.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2612009 2613009 . + . ID=gene-LNP58_RS12385;Name=LNP58_RS12385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12385;old_locus_tag=LNP58_12370;pseudo=true NZ_CP086372.1 Protein Homology CDS 2612009 2613009 . + 0 ID=cds-LNP58_RS12385;Parent=gene-LNP58_RS12385;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS12385;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2613110 2613610 . + . ID=gene-LNP58_RS12390;Name=LNP58_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12390;old_locus_tag=LNP58_12375 NZ_CP086372.1 Protein Homology CDS 2613110 2613610 . + 0 ID=cds-WP_069960003.1;Parent=gene-LNP58_RS12390;Dbxref=Genbank:WP_069960003.1;Name=WP_069960003.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159113.1;locus_tag=LNP58_RS12390;product=GNAT family N-acetyltransferase;protein_id=WP_069960003.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2613607 2614062 . + . ID=gene-LNP58_RS12395;Name=LNP58_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12395;old_locus_tag=LNP58_12380 NZ_CP086372.1 Protein Homology CDS 2613607 2614062 . + 0 ID=cds-WP_069960002.1;Parent=gene-LNP58_RS12395;Dbxref=Genbank:WP_069960002.1;Name=WP_069960002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346314.1;locus_tag=LNP58_RS12395;product=nucleoside deaminase;protein_id=WP_069960002.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2614095 2614445 . + . ID=gene-LNP58_RS12400;Name=LNP58_RS12400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12400;old_locus_tag=LNP58_12385;partial=true;pseudo=true;start_range=.,2614095 NZ_CP086372.1 Protein Homology CDS 2614095 2614445 . + 0 ID=cds-LNP58_RS12400;Parent=gene-LNP58_RS12400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS12400;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2614095;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2614532 2615144 . + . ID=gene-LNP58_RS12405;Name=LNP58_RS12405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12405;old_locus_tag=LNP58_12390;pseudo=true NZ_CP086372.1 Protein Homology CDS 2614532 2615144 . + 0 ID=cds-LNP58_RS12405;Parent=gene-LNP58_RS12405;Note=frameshifted%3B internal stop;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472603.1;locus_tag=LNP58_RS12405;product=HAD-IA family hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2615256 2616188 . - . ID=gene-LNP58_RS12410;Name=LNP58_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12410;old_locus_tag=LNP58_12395 NZ_CP086372.1 Protein Homology CDS 2615256 2616188 . - 0 ID=cds-WP_011260344.1;Parent=gene-LNP58_RS12410;Dbxref=Genbank:WP_011260344.1;Name=WP_011260344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038567.1;locus_tag=LNP58_RS12410;product=carbohydrate kinase family protein;protein_id=WP_011260344.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2616465 2617511 . + . ID=gene-LNP58_RS12415;Name=LNP58_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12415;old_locus_tag=LNP58_12400 NZ_CP086372.1 Protein Homology CDS 2616465 2617511 . + 0 ID=cds-WP_012444096.1;Parent=gene-LNP58_RS12415;Dbxref=Genbank:WP_012444096.1;Name=WP_012444096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=LNP58_RS12415;product=rod shape-determining protein;protein_id=WP_012444096.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2617684 2619054 . + . ID=gene-LNP58_RS12420;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LNP58_RS12420;old_locus_tag=LNP58_12405 NZ_CP086372.1 Protein Homology CDS 2617684 2619054 . + 0 ID=cds-WP_069960000.1;Parent=gene-LNP58_RS12420;Dbxref=Genbank:WP_069960000.1;Name=WP_069960000.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112559.1;locus_tag=LNP58_RS12420;product=rod shape-determining protein MreC;protein_id=WP_069960000.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2619051 2619536 . + . ID=gene-LNP58_RS12425;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LNP58_RS12425;old_locus_tag=LNP58_12410 NZ_CP086372.1 Protein Homology CDS 2619051 2619536 . + 0 ID=cds-WP_011409462.1;Parent=gene-LNP58_RS12425;Dbxref=Genbank:WP_011409462.1;Name=WP_011409462.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911183.1;locus_tag=LNP58_RS12425;product=rod shape-determining protein MreD;protein_id=WP_011409462.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2619540 2621600 . + . ID=gene-LNP58_RS12430;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LNP58_RS12430;old_locus_tag=LNP58_12415 NZ_CP086372.1 Protein Homology CDS 2619540 2621600 . + 0 ID=cds-WP_011260341.1;Parent=gene-LNP58_RS12430;Dbxref=Genbank:WP_011260341.1;Name=WP_011260341.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303045.1;locus_tag=LNP58_RS12430;product=penicillin-binding protein 2;protein_id=WP_011260341.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2621597 2622715 . + . ID=gene-LNP58_RS12435;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LNP58_RS12435;old_locus_tag=LNP58_12420 NZ_CP086372.1 Protein Homology CDS 2621597 2622715 . + 0 ID=cds-WP_011260340.1;Parent=gene-LNP58_RS12435;Dbxref=Genbank:WP_011260340.1;Name=WP_011260340.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573354.1;locus_tag=LNP58_RS12435;product=rod shape-determining protein RodA;protein_id=WP_011260340.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2622805 2623391 . + . ID=gene-LNP58_RS12440;Name=LNP58_RS12440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12440;old_locus_tag=LNP58_12425;partial=true;pseudo=true;start_range=.,2622805 NZ_CP086372.1 Protein Homology CDS 2622805 2623391 . + 0 ID=cds-LNP58_RS12440;Parent=gene-LNP58_RS12440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS12440;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2622805;transl_table=11 NZ_CP086372.1 RefSeq gene 2623477 2626254 . + . ID=gene-LNP58_RS12445;Name=LNP58_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12445;old_locus_tag=LNP58_12430 NZ_CP086372.1 Protein Homology CDS 2623477 2626254 . + 0 ID=cds-WP_080496439.1;Parent=gene-LNP58_RS12445;Dbxref=Genbank:WP_080496439.1;Name=WP_080496439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409209.1;locus_tag=LNP58_RS12445;product=type VI secretion system Vgr family protein;protein_id=WP_080496439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2626251 2627975 . + . ID=gene-LNP58_RS12450;Name=LNP58_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12450;old_locus_tag=LNP58_12435 NZ_CP086372.1 Protein Homology CDS 2626251 2627975 . + 0 ID=cds-WP_075239457.1;Parent=gene-LNP58_RS12450;Dbxref=Genbank:WP_075239457.1;Name=WP_075239457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=LNP58_RS12450;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_075239457.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2627981 2628739 . + . ID=gene-LNP58_RS12455;Name=LNP58_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12455;old_locus_tag=LNP58_12440 NZ_CP086372.1 GeneMarkS-2+ CDS 2627981 2628739 . + 0 ID=cds-WP_143698369.1;Parent=gene-LNP58_RS12455;Dbxref=Genbank:WP_143698369.1;Name=WP_143698369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS12455;product=hypothetical protein;protein_id=WP_143698369.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2628747 2629703 . - . ID=gene-LNP58_RS12460;Name=LNP58_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12460;old_locus_tag=LNP58_12445 NZ_CP086372.1 Protein Homology CDS 2628747 2629703 . - 0 ID=cds-WP_069963899.1;Parent=gene-LNP58_RS12460;Dbxref=Genbank:WP_069963899.1;Name=WP_069963899.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS12460;product=IS30-like element IS1112a family transposase;protein_id=WP_069963899.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2629916 2631016 . + . ID=gene-LNP58_RS12465;Name=LNP58_RS12465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12465;old_locus_tag=LNP58_12450;pseudo=true NZ_CP086372.1 Protein Homology CDS 2629916 2631016 . + 0 ID=cds-LNP58_RS12465;Parent=gene-LNP58_RS12465;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS12465;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2631184 2631462 . + . ID=gene-LNP58_RS12470;Name=LNP58_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12470;old_locus_tag=LNP58_12455 NZ_CP086372.1 Protein Homology CDS 2631184 2631462 . + 0 ID=cds-WP_229001944.1;Parent=gene-LNP58_RS12470;Dbxref=Genbank:WP_229001944.1;Name=WP_229001944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=LNP58_RS12470;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_229001944.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2631354 2631824 . + . ID=gene-LNP58_RS12475;Name=LNP58_RS12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12475;old_locus_tag=LNP58_12460;partial=true;pseudo=true;start_range=.,2631354 NZ_CP086372.1 Protein Homology CDS 2631354 2631824 . + 0 ID=cds-LNP58_RS12475;Parent=gene-LNP58_RS12475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346338.1;locus_tag=LNP58_RS12475;partial=true;product=glycosyl hydrolase family 28 protein;pseudo=true;start_range=.,2631354;transl_table=11 NZ_CP086372.1 RefSeq gene 2632093 2633232 . + . ID=gene-LNP58_RS12480;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LNP58_RS12480;old_locus_tag=LNP58_12465 NZ_CP086372.1 Protein Homology CDS 2632093 2633232 . + 0 ID=cds-WP_011260336.1;Parent=gene-LNP58_RS12480;Dbxref=Genbank:WP_011260336.1;Name=WP_011260336.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118980.1;locus_tag=LNP58_RS12480;product=lytic murein transglycosylase B;protein_id=WP_011260336.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2633229 2634644 . + . ID=gene-LNP58_RS12485;Name=LNP58_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12485;old_locus_tag=LNP58_12470 NZ_CP086372.1 Protein Homology CDS 2633229 2634644 . + 0 ID=cds-WP_011260335.1;Parent=gene-LNP58_RS12485;Dbxref=Genbank:WP_011260335.1;Name=WP_011260335.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155355.1;locus_tag=LNP58_RS12485;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_011260335.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2635145 2636350 . + . ID=gene-LNP58_RS12490;Name=LNP58_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12490;old_locus_tag=LNP58_12475 NZ_CP086372.1 Protein Homology CDS 2635145 2636350 . + 0 ID=cds-WP_011260334.1;Parent=gene-LNP58_RS12490;Dbxref=Genbank:WP_011260334.1;Name=WP_011260334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115444.1;locus_tag=LNP58_RS12490;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_011260334.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2636564 2636683 . - . ID=gene-LNP58_RS12495;Name=LNP58_RS12495;end_range=2636683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12495;old_locus_tag=LNP58_12480;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2636564 2636683 . - 0 ID=cds-LNP58_RS12495;Parent=gene-LNP58_RS12495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2636683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159067.1;locus_tag=LNP58_RS12495;partial=true;product=DUF2219 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2636639 2637289 . + . ID=gene-LNP58_RS12500;Name=LNP58_RS12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12500;old_locus_tag=LNP58_12485;partial=true;pseudo=true;start_range=.,2636639 NZ_CP086372.1 Protein Homology CDS 2636639 2637289 . + 0 ID=cds-LNP58_RS12500;Parent=gene-LNP58_RS12500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089329.1;locus_tag=LNP58_RS12500;partial=true;product=peptidoglycan-binding protein;pseudo=true;start_range=.,2636639;transl_table=11 NZ_CP086372.1 RefSeq gene 2637416 2637694 . + . ID=gene-LNP58_RS12505;Name=LNP58_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12505;old_locus_tag=LNP58_12490 NZ_CP086372.1 Protein Homology CDS 2637416 2637694 . + 0 ID=cds-WP_011409453.1;Parent=gene-LNP58_RS12505;Dbxref=Genbank:WP_011409453.1;Name=WP_011409453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409453.1;locus_tag=LNP58_RS12505;product=YbeD family protein;protein_id=WP_011409453.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2637682 2638380 . + . ID=gene-LNP58_RS12510;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LNP58_RS12510;old_locus_tag=LNP58_12495 NZ_CP086372.1 Protein Homology CDS 2637682 2638380 . + 0 ID=cds-WP_069964602.1;Parent=gene-LNP58_RS12510;Dbxref=Genbank:WP_069964602.1;Name=WP_069964602.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158468.1;locus_tag=LNP58_RS12510;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_069964602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2638395 2639408 . + . ID=gene-LNP58_RS12515;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LNP58_RS12515;old_locus_tag=LNP58_12500 NZ_CP086372.1 Protein Homology CDS 2638395 2639408 . + 0 ID=cds-WP_069964601.1;Parent=gene-LNP58_RS12515;Dbxref=Genbank:WP_069964601.1;Name=WP_069964601.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301161.1;locus_tag=LNP58_RS12515;product=lipoyl synthase;protein_id=WP_069964601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2639409 2639558 . + . ID=gene-LNP58_RS12520;Name=LNP58_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12520;old_locus_tag=LNP58_12505 NZ_CP086372.1 GeneMarkS-2+ CDS 2639409 2639558 . + 0 ID=cds-WP_155296183.1;Parent=gene-LNP58_RS12520;Dbxref=Genbank:WP_155296183.1;Name=WP_155296183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS12520;product=hypothetical protein;protein_id=WP_155296183.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2639653 2641464 . + . ID=gene-LNP58_RS12525;Name=LNP58_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12525;old_locus_tag=LNP58_12510 NZ_CP086372.1 Protein Homology CDS 2639653 2641464 . + 0 ID=cds-WP_041182275.1;Parent=gene-LNP58_RS12525;Dbxref=Genbank:WP_041182275.1;Name=WP_041182275.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154983.1;locus_tag=LNP58_RS12525;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_041182275.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2641461 2642555 . + . ID=gene-LNP58_RS12530;Name=LNP58_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12530;old_locus_tag=LNP58_12515 NZ_CP086372.1 Protein Homology CDS 2641461 2642555 . + 0 ID=cds-WP_011260329.1;Parent=gene-LNP58_RS12530;Dbxref=Genbank:WP_011260329.1;Name=WP_011260329.1;Ontology_term=GO:0009307,GO:0000287,GO:0003677,GO:0009036;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116034.1;locus_tag=LNP58_RS12530;product=BsuBI/PstI family type II restriction endonuclease;protein_id=WP_011260329.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2643078 2645237 . + . ID=gene-LNP58_RS12535;Name=LNP58_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12535;old_locus_tag=LNP58_12520 NZ_CP086372.1 Protein Homology CDS 2643078 2645237 . + 0 ID=cds-WP_171970776.1;Parent=gene-LNP58_RS12535;Dbxref=Genbank:WP_171970776.1;Name=WP_171970776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155351.1;locus_tag=LNP58_RS12535;product=carboxy terminal-processing peptidase;protein_id=WP_171970776.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2645529 2645780 . - . ID=gene-LNP58_RS12540;Name=LNP58_RS12540;end_range=2645780,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12540;old_locus_tag=LNP58_12525;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2645529 2645780 . - 0 ID=cds-LNP58_RS12540;Parent=gene-LNP58_RS12540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2645780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368226.1;locus_tag=LNP58_RS12540;partial=true;product=endonuclease;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2645803 2647179 . - . ID=gene-LNP58_RS12545;Name=LNP58_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12545;old_locus_tag=LNP58_12530 NZ_CP086372.1 Protein Homology CDS 2645803 2647179 . - 0 ID=cds-WP_069964507.1-3;Parent=gene-LNP58_RS12545;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS12545;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2647288 2647803 . - . ID=gene-LNP58_RS12550;Name=LNP58_RS12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12550;old_locus_tag=LNP58_12535;partial=true;pseudo=true;start_range=.,2647288 NZ_CP086372.1 Protein Homology CDS 2647288 2647803 . - 0 ID=cds-LNP58_RS12550;Parent=gene-LNP58_RS12550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159070.1;locus_tag=LNP58_RS12550;partial=true;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;start_range=.,2647288;transl_table=11 NZ_CP086372.1 RefSeq gene 2648075 2649130 . + . ID=gene-LNP58_RS12555;Name=LNP58_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12555;old_locus_tag=LNP58_12540 NZ_CP086372.1 Protein Homology CDS 2648075 2649130 . + 0 ID=cds-WP_011260326.1;Parent=gene-LNP58_RS12555;Dbxref=Genbank:WP_011260326.1;Name=WP_011260326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303950.1;locus_tag=LNP58_RS12555;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_011260326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2649253 2650656 . + . ID=gene-LNP58_RS12560;Name=LNP58_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12560;old_locus_tag=LNP58_12545 NZ_CP086372.1 Protein Homology CDS 2649253 2650656 . + 0 ID=cds-WP_011409450.1;Parent=gene-LNP58_RS12560;Dbxref=Genbank:WP_011409450.1;Name=WP_011409450.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990339.1;locus_tag=LNP58_RS12560;product=nicotinate phosphoribosyltransferase;protein_id=WP_011409450.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2650679 2651792 . + . ID=gene-LNP58_RS12565;Name=LNP58_RS12565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12565;old_locus_tag=LNP58_12550;pseudo=true NZ_CP086372.1 Protein Homology CDS 2650679 2651792 . + 0 ID=cds-LNP58_RS12565;Parent=gene-LNP58_RS12565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162368.1;locus_tag=LNP58_RS12565;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2651785 2652839 . + . ID=gene-LNP58_RS12570;Name=LNP58_RS12570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12570;old_locus_tag=LNP58_12555;pseudo=true NZ_CP086372.1 Protein Homology CDS 2651785 2652839 . + 0 ID=cds-LNP58_RS12570;Parent=gene-LNP58_RS12570;Note=frameshifted%3B internal stop;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089336.1;locus_tag=LNP58_RS12570;product=DNA methyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2652914 2653675 . + . ID=gene-LNP58_RS12575;Name=LNP58_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12575;old_locus_tag=LNP58_12560 NZ_CP086372.1 Protein Homology CDS 2652914 2653675 . + 0 ID=cds-WP_012444115.1;Parent=gene-LNP58_RS12575;Dbxref=Genbank:WP_012444115.1;Name=WP_012444115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155343.1;locus_tag=LNP58_RS12575;product=DUF2242 domain-containing protein;protein_id=WP_012444115.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2653800 2654180 . + . ID=gene-LNP58_RS12580;Name=LNP58_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12580;old_locus_tag=LNP58_12565 NZ_CP086372.1 Protein Homology CDS 2653800 2654180 . + 0 ID=cds-WP_011409446.1;Parent=gene-LNP58_RS12580;Dbxref=Genbank:WP_011409446.1;Name=WP_011409446.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911143.1;locus_tag=LNP58_RS12580;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011409446.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2654352 2655689 . + . ID=gene-LNP58_RS12585;Name=LNP58_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12585;old_locus_tag=LNP58_12570 NZ_CP086372.1 Protein Homology CDS 2654352 2655689 . + 0 ID=cds-WP_075239460.1;Parent=gene-LNP58_RS12585;Dbxref=Genbank:WP_075239460.1;Name=WP_075239460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368217.1;locus_tag=LNP58_RS12585;product=hypothetical protein;protein_id=WP_075239460.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2655710 2656651 . + . ID=gene-LNP58_RS12590;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=LNP58_RS12590;old_locus_tag=LNP58_12575 NZ_CP086372.1 Protein Homology CDS 2655710 2656651 . + 0 ID=cds-WP_069964758.1;Parent=gene-LNP58_RS12590;Dbxref=Genbank:WP_069964758.1;Name=WP_069964758.1;Ontology_term=GO:0006098,GO:0004616;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990351.1;locus_tag=LNP58_RS12590;product=decarboxylating 6-phosphogluconate dehydrogenase;protein_id=WP_069964758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2656991 2658043 . - . ID=gene-LNP58_RS12595;Name=LNP58_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12595;old_locus_tag=LNP58_12580 NZ_CP086372.1 Protein Homology CDS 2656991 2658043 . - 0 ID=cds-WP_011260318.1;Parent=gene-LNP58_RS12595;Dbxref=Genbank:WP_011260318.1;Name=WP_011260318.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368214.1;locus_tag=LNP58_RS12595;product=oxidoreductase;protein_id=WP_011260318.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2658194 2658565 . + . ID=gene-LNP58_RS12600;Name=LNP58_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12600;old_locus_tag=LNP58_12585 NZ_CP086372.1 Protein Homology CDS 2658194 2658565 . + 0 ID=cds-WP_011260317.1;Parent=gene-LNP58_RS12600;Dbxref=Genbank:WP_011260317.1;Name=WP_011260317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113055.1;locus_tag=LNP58_RS12600;product=BON domain-containing protein;protein_id=WP_011260317.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2658851 2660662 . + . ID=gene-LNP58_RS12605;Name=LNP58_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12605;old_locus_tag=LNP58_12590 NZ_CP086372.1 Protein Homology CDS 2658851 2660662 . + 0 ID=cds-WP_011409443.1;Parent=gene-LNP58_RS12605;Dbxref=Genbank:WP_011409443.1;Name=WP_011409443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368210.1;locus_tag=LNP58_RS12605;product=ATP-binding protein;protein_id=WP_011409443.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2660659 2661099 . + . ID=gene-LNP58_RS12610;Name=LNP58_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12610;old_locus_tag=LNP58_12595 NZ_CP086372.1 Protein Homology CDS 2660659 2661099 . + 0 ID=cds-WP_011260315.1;Parent=gene-LNP58_RS12610;Dbxref=Genbank:WP_011260315.1;Name=WP_011260315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804768.1;locus_tag=LNP58_RS12610;product=response regulator;protein_id=WP_011260315.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2661103 2662605 . + . ID=gene-LNP58_RS12615;Name=LNP58_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12615;old_locus_tag=LNP58_12600 NZ_CP086372.1 Protein Homology CDS 2661103 2662605 . + 0 ID=cds-WP_011260314.1;Parent=gene-LNP58_RS12615;Dbxref=Genbank:WP_011260314.1;Name=WP_011260314.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346356.1;locus_tag=LNP58_RS12615;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011260314.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2662697 2663212 . + . ID=gene-LNP58_RS12620;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LNP58_RS12620;old_locus_tag=LNP58_12605 NZ_CP086372.1 Protein Homology CDS 2662697 2663212 . + 0 ID=cds-WP_011260313.1;Parent=gene-LNP58_RS12620;Dbxref=Genbank:WP_011260313.1;Name=WP_011260313.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482682.1;locus_tag=LNP58_RS12620;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_011260313.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2663381 2664118 . - . ID=gene-LNP58_RS12625;Name=LNP58_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12625;old_locus_tag=LNP58_12610 NZ_CP086372.1 Protein Homology CDS 2663381 2664118 . - 0 ID=cds-WP_011409442.1;Parent=gene-LNP58_RS12625;Dbxref=Genbank:WP_011409442.1;Name=WP_011409442.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303260.1;locus_tag=LNP58_RS12625;product=pteridine reductase;protein_id=WP_011409442.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2664117 2665370 . + . ID=gene-LNP58_RS12630;Name=LNP58_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12630;old_locus_tag=LNP58_12615 NZ_CP086372.1 Protein Homology CDS 2664117 2665370 . + 0 ID=cds-WP_011409441.1;Parent=gene-LNP58_RS12630;Dbxref=Genbank:WP_011409441.1;Name=WP_011409441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237264.1;locus_tag=LNP58_RS12630;product=class I SAM-dependent methyltransferase;protein_id=WP_011409441.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2665358 2665546 . + . ID=gene-LNP58_RS12635;Name=LNP58_RS12635;end_range=2665546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12635;old_locus_tag=LNP58_12620;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2665358 2665546 . + 0 ID=cds-LNP58_RS12635;Parent=gene-LNP58_RS12635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2665546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968563.1;locus_tag=LNP58_RS12635;partial=true;product=VanZ family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2665586 2665860 . - . ID=gene-LNP58_RS12640;Name=LNP58_RS12640;end_range=2665860,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12640;old_locus_tag=LNP58_12625;partial=true;pseudo=true;start_range=.,2665586 NZ_CP086372.1 Protein Homology CDS 2665586 2665860 . - 0 ID=cds-LNP58_RS12640;Parent=gene-LNP58_RS12640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=2665860,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612215.1;locus_tag=LNP58_RS12640;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2665586;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2665895 2667006 . - . ID=gene-LNP58_RS12645;Name=LNP58_RS12645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12645;old_locus_tag=LNP58_12630;pseudo=true NZ_CP086372.1 Protein Homology CDS 2665895 2667006 . - 0 ID=cds-LNP58_RS12645;Parent=gene-LNP58_RS12645;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=LNP58_RS12645;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2667058 2667168 . + . ID=gene-LNP58_RS12650;Name=LNP58_RS12650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12650;old_locus_tag=LNP58_12635;partial=true;pseudo=true;start_range=.,2667058 NZ_CP086372.1 Protein Homology CDS 2667058 2667168 . + 0 ID=cds-LNP58_RS12650;Parent=gene-LNP58_RS12650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS12650;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,2667058;transl_table=11 NZ_CP086372.1 RefSeq gene 2667450 2670140 . + . ID=gene-LNP58_RS12655;Name=LNP58_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12655;old_locus_tag=LNP58_12640 NZ_CP086372.1 Protein Homology CDS 2667450 2670140 . + 0 ID=cds-WP_069960264.1;Parent=gene-LNP58_RS12655;Dbxref=Genbank:WP_069960264.1;Name=WP_069960264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050492.1;locus_tag=LNP58_RS12655;product=TonB-dependent receptor;protein_id=WP_069960264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2670291 2673188 . + . ID=gene-LNP58_RS12660;Name=LNP58_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12660;old_locus_tag=LNP58_12645 NZ_CP086372.1 Protein Homology CDS 2670291 2673188 . + 0 ID=cds-WP_011260306.1;Parent=gene-LNP58_RS12660;Dbxref=Genbank:WP_011260306.1;Name=WP_011260306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451298.1;locus_tag=LNP58_RS12660;product=DUF4982 domain-containing protein;protein_id=WP_011260306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2673185 2675581 . + . ID=gene-LNP58_RS12665;Name=LNP58_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12665;old_locus_tag=LNP58_12650 NZ_CP086372.1 Protein Homology CDS 2673185 2675581 . + 0 ID=cds-WP_069960326.1;Parent=gene-LNP58_RS12665;Dbxref=Genbank:WP_069960326.1;Name=WP_069960326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368195.1;locus_tag=LNP58_RS12665;product=alpha-N-acetylglucosaminidase;protein_id=WP_069960326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2675727 2676893 . + . ID=gene-LNP58_RS12670;Name=LNP58_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12670;old_locus_tag=LNP58_12655 NZ_CP086372.1 Protein Homology CDS 2675727 2676893 . + 0 ID=cds-WP_011409433.1;Parent=gene-LNP58_RS12670;Dbxref=Genbank:WP_011409433.1;Name=WP_011409433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911069.1;locus_tag=LNP58_RS12670;product=heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein;protein_id=WP_011409433.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2677153 2677875 . + . ID=gene-LNP58_RS12675;Name=LNP58_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12675;old_locus_tag=LNP58_12660 NZ_CP086372.1 Protein Homology CDS 2677153 2677875 . + 0 ID=cds-WP_012444126.1;Parent=gene-LNP58_RS12675;Dbxref=Genbank:WP_012444126.1;Name=WP_012444126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156688.1;locus_tag=LNP58_RS12675;product=GntR family transcriptional regulator;protein_id=WP_012444126.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2677920 2679197 . + . ID=gene-LNP58_RS12680;Name=LNP58_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12680;old_locus_tag=LNP58_12665 NZ_CP086372.1 Protein Homology CDS 2677920 2679197 . + 0 ID=cds-WP_027703724.1;Parent=gene-LNP58_RS12680;Dbxref=Genbank:WP_027703724.1;Name=WP_027703724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911064.1;locus_tag=LNP58_RS12680;product=sugar MFS transporter;protein_id=WP_027703724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2679238 2680305 . + . ID=gene-LNP58_RS12685;Name=LNP58_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12685;old_locus_tag=LNP58_12670 NZ_CP086372.1 Protein Homology CDS 2679238 2680305 . + 0 ID=cds-WP_012444129.1;Parent=gene-LNP58_RS12685;Dbxref=Genbank:WP_012444129.1;Name=WP_012444129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301891.1;locus_tag=LNP58_RS12685;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_012444129.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2680312 2681340 . + . ID=gene-LNP58_RS12690;Name=LNP58_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12690;old_locus_tag=LNP58_12675 NZ_CP086372.1 Protein Homology CDS 2680312 2681340 . + 0 ID=cds-WP_011260300.1;Parent=gene-LNP58_RS12690;Dbxref=Genbank:WP_011260300.1;Name=WP_011260300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995982.1;locus_tag=LNP58_RS12690;product=SIS domain-containing protein;protein_id=WP_011260300.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2681343 2682497 . + . ID=gene-LNP58_RS12695;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LNP58_RS12695;old_locus_tag=LNP58_12680 NZ_CP086372.1 Protein Homology CDS 2681343 2682497 . + 0 ID=cds-WP_044756434.1;Parent=gene-LNP58_RS12695;Dbxref=Genbank:WP_044756434.1;Name=WP_044756434.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974066.1;locus_tag=LNP58_RS12695;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_044756434.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2682917 2683522 . - . ID=gene-LNP58_RS12700;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=LNP58_RS12700;old_locus_tag=LNP58_12685 NZ_CP086372.1 Protein Homology CDS 2682917 2683522 . - 0 ID=cds-WP_044756435.1;Parent=gene-LNP58_RS12700;Dbxref=Genbank:WP_044756435.1;Name=WP_044756435.1;Ontology_term=GO:0000271,GO:0042710,GO:0008375,GO:0016020;gbkey=CDS;gene=pgaD;go_component=membrane|0016020||IEA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501922.1;locus_tag=LNP58_RS12700;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_044756435.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2683519 2684772 . - . ID=gene-LNP58_RS12705;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LNP58_RS12705;old_locus_tag=LNP58_12690 NZ_CP086372.1 Protein Homology CDS 2683519 2684772 . - 0 ID=cds-WP_011260297.1;Parent=gene-LNP58_RS12705;Dbxref=Genbank:WP_011260297.1;Name=WP_011260297.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304732.1;locus_tag=LNP58_RS12705;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_011260297.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2684774 2686672 . - . ID=gene-LNP58_RS12710;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LNP58_RS12710;old_locus_tag=LNP58_12695 NZ_CP086372.1 Protein Homology CDS 2684774 2686672 . - 0 ID=cds-WP_011409429.1;Parent=gene-LNP58_RS12710;Dbxref=Genbank:WP_011409429.1;Name=WP_011409429.1;Ontology_term=GO:0045226,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301885.1;locus_tag=LNP58_RS12710;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_011409429.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2686674 2688716 . - . ID=gene-LNP58_RS12715;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LNP58_RS12715;old_locus_tag=LNP58_12700 NZ_CP086372.1 Protein Homology CDS 2686674 2688716 . - 0 ID=cds-WP_011409428.1;Parent=gene-LNP58_RS12715;Dbxref=Genbank:WP_011409428.1;Name=WP_011409428.1;Ontology_term=GO:0015774,GO:0042710,GO:0005215,GO:0009279;gbkey=CDS;gene=pgaA;go_component=cell outer membrane|0009279||IEA;go_function=transporter activity|0005215||IEA;go_process=polysaccharide transport|0015774||IEA,biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444133.1;locus_tag=LNP58_RS12715;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_011409428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2689341 2689571 . + . ID=gene-LNP58_RS12720;Name=LNP58_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12720;old_locus_tag=LNP58_12705 NZ_CP086372.1 Protein Homology CDS 2689341 2689571 . + 0 ID=cds-WP_012444134.1;Parent=gene-LNP58_RS12720;Dbxref=Genbank:WP_012444134.1;Name=WP_012444134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301884.1;locus_tag=LNP58_RS12720;product=hypothetical protein;protein_id=WP_012444134.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2690033 2690998 . - . ID=gene-LNP58_RS12725;Name=LNP58_RS12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12725;old_locus_tag=LNP58_12710;pseudo=true NZ_CP086372.1 Protein Homology CDS 2690033 2690998 . - 0 ID=cds-LNP58_RS12725;Parent=gene-LNP58_RS12725;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS12725;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2691634 2693882 . + . ID=gene-LNP58_RS12730;Name=LNP58_RS12730;end_range=2693882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12730;old_locus_tag=LNP58_12715;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2691634 2693882 . + 0 ID=cds-LNP58_RS12730;Parent=gene-LNP58_RS12730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0019867;end_range=2693882,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508960.1;locus_tag=LNP58_RS12730;partial=true;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2694057 2694377 . + . ID=gene-LNP58_RS12735;Name=LNP58_RS12735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12735;old_locus_tag=LNP58_12720;partial=true;pseudo=true;start_range=.,2694057 NZ_CP086372.1 Protein Homology CDS 2694057 2694377 . + 0 ID=cds-LNP58_RS12735;Parent=gene-LNP58_RS12735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089361.1;locus_tag=LNP58_RS12735;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,2694057;transl_table=11 NZ_CP086372.1 RefSeq gene 2694408 2695171 . - . ID=gene-LNP58_RS12740;Name=LNP58_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12740;old_locus_tag=LNP58_12725 NZ_CP086372.1 Protein Homology CDS 2694856 2695171 . - 0 ID=cds-WP_094187715.1-5;Parent=gene-LNP58_RS12740;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12740;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2694408 2694856 . - 2 ID=cds-WP_094187715.1-5;Parent=gene-LNP58_RS12740;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12740;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2695297 2695372 . + . ID=gene-LNP58_RS12745;Name=LNP58_RS12745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS12745;old_locus_tag=LNP58_12730 NZ_CP086372.1 cmsearch ncRNA 2695297 2695372 . + . ID=rna-LNP58_RS12745;Parent=gene-LNP58_RS12745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12745;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2695297 2695372 . + . ID=exon-LNP58_RS12745-1;Parent=rna-LNP58_RS12745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS12745;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2695507 2696475 . + . ID=gene-LNP58_RS12750;Name=LNP58_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12750;old_locus_tag=LNP58_12735 NZ_CP086372.1 Protein Homology CDS 2695507 2696475 . + 0 ID=cds-WP_011258802.1-10;Parent=gene-LNP58_RS12750;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS12750;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2696687 2697643 . + . ID=gene-LNP58_RS12755;Name=LNP58_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12755;old_locus_tag=LNP58_12740 NZ_CP086372.1 Protein Homology CDS 2696687 2697643 . + 0 ID=cds-WP_011407237.1-2;Parent=gene-LNP58_RS12755;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS12755;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2697819 2698781 . + . ID=gene-LNP58_RS12760;Name=LNP58_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12760;old_locus_tag=LNP58_12745 NZ_CP086372.1 Protein Homology CDS 2697819 2698781 . + 0 ID=cds-WP_011409423.1;Parent=gene-LNP58_RS12760;Dbxref=Genbank:WP_011409423.1;Name=WP_011409423.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=LNP58_RS12760;product=IS1595-like element ISXo16 family transposase;protein_id=WP_011409423.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2698821 2700053 . - . ID=gene-LNP58_RS12765;Name=LNP58_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12765;old_locus_tag=LNP58_12750 NZ_CP086372.1 Protein Homology CDS 2698821 2700053 . - 0 ID=cds-WP_011260292.1;Parent=gene-LNP58_RS12765;Dbxref=Genbank:WP_011260292.1;Name=WP_011260292.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159082.1;locus_tag=LNP58_RS12765;product=multifunctional CCA addition/repair protein;protein_id=WP_011260292.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2700138 2700878 . - . ID=gene-LNP58_RS12770;Name=LNP58_RS12770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12770;old_locus_tag=LNP58_12755;partial=true;pseudo=true;start_range=.,2700138 NZ_CP086372.1 Protein Homology CDS 2700138 2700878 . - 0 ID=cds-LNP58_RS12770;Parent=gene-LNP58_RS12770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS12770;partial=true;product=IS5-like element ISXoo4 family transposase;pseudo=true;start_range=.,2700138;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2701081 2701656 . - . ID=gene-LNP58_RS12775;Name=LNP58_RS12775;end_range=2701656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12775;old_locus_tag=LNP58_12760;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2701081 2701656 . - 0 ID=cds-LNP58_RS12775;Parent=gene-LNP58_RS12775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2701656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS12775;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2701700 2702498 . + . ID=gene-LNP58_RS12780;Name=LNP58_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12780;old_locus_tag=LNP58_12765 NZ_CP086372.1 Protein Homology CDS 2701700 2701971 . + 0 ID=cds-WP_094187728.1-2;Parent=gene-LNP58_RS12780;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS12780;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2701970 2702498 . + 1 ID=cds-WP_094187728.1-2;Parent=gene-LNP58_RS12780;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS12780;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2702506 2703252 . - . ID=gene-LNP58_RS12785;Name=LNP58_RS12785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12785;old_locus_tag=LNP58_12770;partial=true;pseudo=true;start_range=.,2702506 NZ_CP086372.1 Protein Homology CDS 2702506 2703252 . - 0 ID=cds-LNP58_RS12785;Parent=gene-LNP58_RS12785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS12785;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,2702506;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2703365 2703696 . - . ID=gene-LNP58_RS12790;Name=LNP58_RS12790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12790;old_locus_tag=LNP58_12775;partial=true;pseudo=true;start_range=.,2703365 NZ_CP086372.1 Protein Homology CDS 2703365 2703696 . - 0 ID=cds-LNP58_RS12790;Parent=gene-LNP58_RS12790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=LNP58_RS12790;partial=true;product=transposase;pseudo=true;start_range=.,2703365;transl_table=11 NZ_CP086372.1 RefSeq gene 2703792 2704130 . - . ID=gene-LNP58_RS12795;Name=LNP58_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12795;old_locus_tag=LNP58_12780 NZ_CP086372.1 GeneMarkS-2+ CDS 2703792 2704130 . - 0 ID=cds-WP_207927976.1;Parent=gene-LNP58_RS12795;Dbxref=Genbank:WP_207927976.1;Name=WP_207927976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS12795;product=hypothetical protein;protein_id=WP_207927976.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2704218 2705594 . - . ID=gene-LNP58_RS12800;Name=LNP58_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12800;old_locus_tag=LNP58_12785 NZ_CP086372.1 Protein Homology CDS 2704218 2705594 . - 0 ID=cds-WP_069964507.1-4;Parent=gene-LNP58_RS12800;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS12800;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2705949 2706917 . - . ID=gene-LNP58_RS12805;Name=LNP58_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12805;old_locus_tag=LNP58_12790 NZ_CP086372.1 Protein Homology CDS 2705949 2706917 . - 0 ID=cds-WP_011257031.1-2;Parent=gene-LNP58_RS12805;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS12805;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2706964 2708340 . - . ID=gene-LNP58_RS12810;Name=LNP58_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12810;old_locus_tag=LNP58_12795 NZ_CP086372.1 Protein Homology CDS 2706964 2708340 . - 0 ID=cds-WP_069964507.1-5;Parent=gene-LNP58_RS12810;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS12810;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2708509 2709272 . - . ID=gene-LNP58_RS12815;Name=LNP58_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12815;old_locus_tag=LNP58_12800 NZ_CP086372.1 Protein Homology CDS 2708957 2709272 . - 0 ID=cds-WP_109182012.1-5;Parent=gene-LNP58_RS12815;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12815;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2708509 2708957 . - 2 ID=cds-WP_109182012.1-5;Parent=gene-LNP58_RS12815;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS12815;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2709465 2712089 . - . ID=gene-LNP58_RS12820;Name=LNP58_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12820;old_locus_tag=LNP58_12805 NZ_CP086372.1 Protein Homology CDS 2709465 2712089 . - 0 ID=cds-WP_220123702.1;Parent=gene-LNP58_RS12820;Dbxref=Genbank:WP_220123702.1;Name=WP_220123702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409420.1;locus_tag=LNP58_RS12820;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_220123702.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2712161 2713150 . - . ID=gene-LNP58_RS12825;Name=LNP58_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12825;old_locus_tag=LNP58_12810 NZ_CP086372.1 Protein Homology CDS 2712161 2713150 . - 0 ID=cds-WP_011409419.1;Parent=gene-LNP58_RS12825;Dbxref=Genbank:WP_011409419.1;Name=WP_011409419.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS12825;product=IS5 family transposase;protein_id=WP_011409419.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2713291 2714334 . + . ID=gene-LNP58_RS12830;Name=LNP58_RS12830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12830;old_locus_tag=LNP58_12815;pseudo=true NZ_CP086372.1 Protein Homology CDS 2713291 2714334 . + 0 ID=cds-LNP58_RS12830;Parent=gene-LNP58_RS12830;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS12830;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2714365 2714941 . - . ID=gene-LNP58_RS12835;Name=LNP58_RS12835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12835;old_locus_tag=LNP58_12820;partial=true;pseudo=true;start_range=.,2714365 NZ_CP086372.1 Protein Homology CDS 2714365 2714941 . - 0 ID=cds-LNP58_RS12835;Parent=gene-LNP58_RS12835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451628.1;locus_tag=LNP58_RS12835;partial=true;product=BCCT family transporter;pseudo=true;start_range=.,2714365;transl_table=11 NZ_CP086372.1 RefSeq gene 2715079 2715816 . - . ID=gene-LNP58_RS12840;Name=LNP58_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12840;old_locus_tag=LNP58_12825 NZ_CP086372.1 Protein Homology CDS 2715079 2715816 . - 0 ID=cds-WP_011409416.1;Parent=gene-LNP58_RS12840;Dbxref=Genbank:WP_011409416.1;Name=WP_011409416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409416.1;locus_tag=LNP58_RS12840;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_011409416.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2715866 2716681 . - . ID=gene-LNP58_RS12845;Name=LNP58_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12845;old_locus_tag=LNP58_12830 NZ_CP086372.1 Protein Homology CDS 2715866 2716681 . - 0 ID=cds-WP_011260284.1;Parent=gene-LNP58_RS12845;Dbxref=Genbank:WP_011260284.1;Name=WP_011260284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089366.1;locus_tag=LNP58_RS12845;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_011260284.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2716773 2717423 . - . ID=gene-LNP58_RS12850;Name=LNP58_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12850;old_locus_tag=LNP58_12835 NZ_CP086372.1 Protein Homology CDS 2716773 2717423 . - 0 ID=cds-WP_011409415.1;Parent=gene-LNP58_RS12850;Dbxref=Genbank:WP_011409415.1;Name=WP_011409415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482610.1;locus_tag=LNP58_RS12850;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_011409415.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2717517 2718314 . - . ID=gene-LNP58_RS12855;Name=LNP58_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12855;old_locus_tag=LNP58_12840 NZ_CP086372.1 Protein Homology CDS 2717517 2718314 . - 0 ID=cds-WP_011260283.1;Parent=gene-LNP58_RS12855;Dbxref=Genbank:WP_011260283.1;Name=WP_011260283.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911041.1;locus_tag=LNP58_RS12855;product=c-type cytochrome;protein_id=WP_011260283.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2718459 2719082 . + . ID=gene-LNP58_RS12860;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LNP58_RS12860;old_locus_tag=LNP58_12845 NZ_CP086372.1 Protein Homology CDS 2718459 2719082 . + 0 ID=cds-WP_011409413.1;Parent=gene-LNP58_RS12860;Dbxref=Genbank:WP_011409413.1;Name=WP_011409413.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156699.1;locus_tag=LNP58_RS12860;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_011409413.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2719222 2720020 . + . ID=gene-LNP58_RS12865;Name=LNP58_RS12865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12865;old_locus_tag=LNP58_12850;pseudo=true NZ_CP086372.1 Protein Homology CDS 2719222 2720020 . + 0 ID=cds-LNP58_RS12865;Parent=gene-LNP58_RS12865;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS12865;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2720029 2720724 . - . ID=gene-LNP58_RS12870;Name=LNP58_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12870;old_locus_tag=LNP58_12855 NZ_CP086372.1 Protein Homology CDS 2720029 2720724 . - 0 ID=cds-WP_011409411.1;Parent=gene-LNP58_RS12870;Dbxref=Genbank:WP_011409411.1;Name=WP_011409411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171583.1;locus_tag=LNP58_RS12870;product=VIT family protein;protein_id=WP_011409411.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2720940 2722304 . + . ID=gene-LNP58_RS12875;Name=LNP58_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12875;old_locus_tag=LNP58_12860 NZ_CP086372.1 Protein Homology CDS 2720940 2722304 . + 0 ID=cds-WP_011260279.1;Parent=gene-LNP58_RS12875;Dbxref=Genbank:WP_011260279.1;Name=WP_011260279.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=LNP58_RS12875;product=glutamate--cysteine ligase;protein_id=WP_011260279.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2722491 2723409 . - . ID=gene-LNP58_RS12880;Name=LNP58_RS12880;end_range=2723409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12880;old_locus_tag=LNP58_12865;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2722491 2723409 . - 0 ID=cds-LNP58_RS12880;Parent=gene-LNP58_RS12880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2723409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576761.1;locus_tag=LNP58_RS12880;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2723376 2723795 . + . ID=gene-LNP58_RS12885;Name=LNP58_RS12885;end_range=2723795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12885;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2723376 2723795 . + 0 ID=cds-LNP58_RS12885;Parent=gene-LNP58_RS12885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042398,GO:0004357;end_range=2723795,.;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014162019.1;locus_tag=LNP58_RS12885;partial=true;product=glutamate-cysteine ligase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2723868 2725187 . + . ID=gene-LNP58_RS12890;Name=LNP58_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12890;old_locus_tag=LNP58_12870 NZ_CP086372.1 Protein Homology CDS 2723868 2725187 . + 0 ID=cds-WP_205412332.1;Parent=gene-LNP58_RS12890;Dbxref=Genbank:WP_205412332.1;Name=WP_205412332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS12890;product=IS701-like element ISXo15 family transposase;protein_id=WP_205412332.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2725273 2726040 . + . ID=gene-LNP58_RS12895;Name=LNP58_RS12895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS12895;old_locus_tag=LNP58_12875;partial=true;pseudo=true;start_range=.,2725273 NZ_CP086372.1 Protein Homology CDS 2725273 2726040 . + 0 ID=cds-LNP58_RS12895;Parent=gene-LNP58_RS12895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=LNP58_RS12895;partial=true;product=glutamate-cysteine ligase family protein;pseudo=true;start_range=.,2725273;transl_table=11 NZ_CP086372.1 RefSeq gene 2726103 2726588 . - . ID=gene-LNP58_RS12900;Name=LNP58_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12900;old_locus_tag=LNP58_12880 NZ_CP086372.1 Protein Homology CDS 2726103 2726588 . - 0 ID=cds-WP_011409407.1;Parent=gene-LNP58_RS12900;Dbxref=Genbank:WP_011409407.1;Name=WP_011409407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377824.1;locus_tag=LNP58_RS12900;product=hypothetical protein;protein_id=WP_011409407.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2726990 2727535 . + . ID=gene-LNP58_RS12905;Name=LNP58_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12905;old_locus_tag=LNP58_12885 NZ_CP086372.1 Protein Homology CDS 2726990 2727535 . + 0 ID=cds-WP_228329721.1;Parent=gene-LNP58_RS12905;Dbxref=Genbank:WP_228329721.1;Name=WP_228329721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299880.1;locus_tag=LNP58_RS12905;product=hypothetical protein;protein_id=WP_228329721.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2727557 2728483 . + . ID=gene-LNP58_RS12910;Name=LNP58_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12910;old_locus_tag=LNP58_12890 NZ_CP086372.1 Protein Homology CDS 2727557 2728483 . + 0 ID=cds-WP_042465225.1;Parent=gene-LNP58_RS12910;Dbxref=Genbank:WP_042465225.1;Name=WP_042465225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118219.1;locus_tag=LNP58_RS12910;product=hypothetical protein;protein_id=WP_042465225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2728516 2730015 . - . ID=gene-LNP58_RS12915;Name=LNP58_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12915;old_locus_tag=LNP58_12895 NZ_CP086372.1 Protein Homology CDS 2728516 2730015 . - 0 ID=cds-WP_011409404.1;Parent=gene-LNP58_RS12915;Dbxref=Genbank:WP_011409404.1;Name=WP_011409404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365576.1;locus_tag=LNP58_RS12915;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_011409404.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2730012 2730740 . - . ID=gene-LNP58_RS12920;Name=LNP58_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12920;old_locus_tag=LNP58_12900 NZ_CP086372.1 Protein Homology CDS 2730012 2730740 . - 0 ID=cds-WP_011409403.1;Parent=gene-LNP58_RS12920;Dbxref=Genbank:WP_011409403.1;Name=WP_011409403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902620.1;locus_tag=LNP58_RS12920;product=response regulator transcription factor;protein_id=WP_011409403.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2730870 2731970 . + . ID=gene-LNP58_RS12925;Name=LNP58_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12925;old_locus_tag=LNP58_12905 NZ_CP086372.1 Protein Homology CDS 2730870 2731970 . + 0 ID=cds-WP_011260272.1;Parent=gene-LNP58_RS12925;Dbxref=Genbank:WP_011260272.1;Name=WP_011260272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112264.1;locus_tag=LNP58_RS12925;product=glycosyltransferase;protein_id=WP_011260272.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2732855 2733130 . + . ID=gene-LNP58_RS12930;Name=LNP58_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12930;old_locus_tag=LNP58_12910 NZ_CP086372.1 Protein Homology CDS 2732855 2733130 . + 0 ID=cds-WP_011260271.1;Parent=gene-LNP58_RS12930;Dbxref=Genbank:WP_011260271.1;Name=WP_011260271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384071.1;locus_tag=LNP58_RS12930;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011260271.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2733195 2734304 . + . ID=gene-LNP58_RS12935;Name=LNP58_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12935;old_locus_tag=LNP58_12915 NZ_CP086372.1 Protein Homology CDS 2733195 2734304 . + 0 ID=cds-WP_011409400.1;Parent=gene-LNP58_RS12935;Dbxref=Genbank:WP_011409400.1;Name=WP_011409400.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477647.1;locus_tag=LNP58_RS12935;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_011409400.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2734373 2734996 . + . ID=gene-LNP58_RS12940;Name=gfa;gbkey=Gene;gene=gfa;gene_biotype=protein_coding;locus_tag=LNP58_RS12940;old_locus_tag=LNP58_12920 NZ_CP086372.1 Protein Homology CDS 2734373 2734996 . + 0 ID=cds-WP_228329720.1;Parent=gene-LNP58_RS12940;Dbxref=Genbank:WP_228329720.1;Name=WP_228329720.1;Ontology_term=GO:0046292,GO:0051907;gbkey=CDS;gene=gfa;go_function=S-(hydroxymethyl)glutathione synthase activity|0051907||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: protein motif:HMM:NF003829.0;locus_tag=LNP58_RS12940;product=S-(hydroxymethyl)glutathione synthase;protein_id=WP_228329720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2735006 2735836 . + . ID=gene-LNP58_RS12945;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LNP58_RS12945;old_locus_tag=LNP58_12925 NZ_CP086372.1 Protein Homology CDS 2735006 2735836 . + 0 ID=cds-WP_011260269.1;Parent=gene-LNP58_RS12945;Dbxref=Genbank:WP_011260269.1;Name=WP_011260269.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902627.1;locus_tag=LNP58_RS12945;product=S-formylglutathione hydrolase;protein_id=WP_011260269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2735966 2736193 . + . ID=gene-LNP58_RS12950;Name=LNP58_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12950;old_locus_tag=LNP58_12930 NZ_CP086372.1 Protein Homology CDS 2735966 2736193 . + 0 ID=cds-WP_012444166.1;Parent=gene-LNP58_RS12950;Dbxref=Genbank:WP_012444166.1;Name=WP_012444166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501951.1;locus_tag=LNP58_RS12950;product=DUF4386 family protein;protein_id=WP_012444166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2736351 2736683 . + . ID=gene-LNP58_RS12955;Name=LNP58_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12955;old_locus_tag=LNP58_12935 NZ_CP086372.1 Protein Homology CDS 2736351 2736683 . + 0 ID=cds-WP_011409398.1;Parent=gene-LNP58_RS12955;Dbxref=Genbank:WP_011409398.1;Name=WP_011409398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409398.1;locus_tag=LNP58_RS12955;product=DUF4386 domain-containing protein;protein_id=WP_011409398.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2736680 2737018 . - . ID=gene-LNP58_RS12960;Name=LNP58_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12960;old_locus_tag=LNP58_12940 NZ_CP086372.1 Protein Homology CDS 2736680 2737018 . - 0 ID=cds-WP_019299887.1;Parent=gene-LNP58_RS12960;Dbxref=Genbank:WP_019299887.1;Name=WP_019299887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299887.1;locus_tag=LNP58_RS12960;product=hypothetical protein;protein_id=WP_019299887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2737199 2738860 . - . ID=gene-LNP58_RS12965;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LNP58_RS12965;old_locus_tag=LNP58_12945 NZ_CP086372.1 Protein Homology CDS 2737199 2738860 . - 0 ID=cds-WP_010367724.1;Parent=gene-LNP58_RS12965;Dbxref=Genbank:WP_010367724.1;Name=WP_010367724.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346396.1;locus_tag=LNP58_RS12965;product=energy-dependent translational throttle protein EttA;protein_id=WP_010367724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2739087 2739656 . + . ID=gene-LNP58_RS12970;Name=LNP58_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12970;old_locus_tag=LNP58_12950 NZ_CP086372.1 Protein Homology CDS 2739087 2739656 . + 0 ID=cds-WP_075242171.1;Parent=gene-LNP58_RS12970;Dbxref=Genbank:WP_075242171.1;Name=WP_075242171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156712.1;locus_tag=LNP58_RS12970;product=RcnB family protein;protein_id=WP_075242171.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2739781 2740242 . - . ID=gene-LNP58_RS12975;Name=LNP58_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12975;old_locus_tag=LNP58_12955 NZ_CP086372.1 GeneMarkS-2+ CDS 2739781 2740242 . - 0 ID=cds-WP_228329719.1;Parent=gene-LNP58_RS12975;Dbxref=Genbank:WP_228329719.1;Name=WP_228329719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS12975;product=hypothetical protein;protein_id=WP_228329719.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2740328 2742682 . + . ID=gene-LNP58_RS12980;Name=LNP58_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12980;old_locus_tag=LNP58_12960 NZ_CP086372.1 Protein Homology CDS 2740328 2742682 . + 0 ID=cds-WP_041182269.1;Parent=gene-LNP58_RS12980;Dbxref=Genbank:WP_041182269.1;Name=WP_041182269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117272.1;locus_tag=LNP58_RS12980;product=TonB-dependent receptor;protein_id=WP_041182269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2742868 2744121 . + . ID=gene-LNP58_RS12985;Name=LNP58_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12985;old_locus_tag=LNP58_12965 NZ_CP086372.1 Protein Homology CDS 2742868 2744121 . + 0 ID=cds-WP_011260263.1;Parent=gene-LNP58_RS12985;Dbxref=Genbank:WP_011260263.1;Name=WP_011260263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260263.1;locus_tag=LNP58_RS12985;product=serine hydroxymethyltransferase;protein_id=WP_011260263.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2744135 2744650 . + . ID=gene-LNP58_RS12990;Name=LNP58_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS12990;old_locus_tag=LNP58_12970 NZ_CP086372.1 Protein Homology CDS 2744135 2744650 . + 0 ID=cds-WP_011409395.1;Parent=gene-LNP58_RS12990;Dbxref=Genbank:WP_011409395.1;Name=WP_011409395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501960.1;locus_tag=LNP58_RS12990;product=hypothetical protein;protein_id=WP_011409395.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2744650 2745174 . + . ID=gene-LNP58_RS12995;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LNP58_RS12995;old_locus_tag=LNP58_12975 NZ_CP086372.1 Protein Homology CDS 2744650 2745174 . + 0 ID=cds-WP_011260261.1;Parent=gene-LNP58_RS12995;Dbxref=Genbank:WP_011260261.1;Name=WP_011260261.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453216.1;locus_tag=LNP58_RS12995;product=transcriptional regulator NrdR;protein_id=WP_011260261.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2745171 2745656 . + . ID=gene-LNP58_RS13000;Name=LNP58_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13000;old_locus_tag=LNP58_12980 NZ_CP086372.1 Protein Homology CDS 2745171 2745656 . + 0 ID=cds-WP_011260260.1;Parent=gene-LNP58_RS13000;Dbxref=Genbank:WP_011260260.1;Name=WP_011260260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112785.1;locus_tag=LNP58_RS13000;product=GNAT family N-acetyltransferase;protein_id=WP_011260260.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2745653 2746762 . + . ID=gene-LNP58_RS13005;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LNP58_RS13005;old_locus_tag=LNP58_12985 NZ_CP086372.1 Protein Homology CDS 2745653 2746762 . + 0 ID=cds-WP_011260259.1;Parent=gene-LNP58_RS13005;Dbxref=Genbank:WP_011260259.1;Name=WP_011260259.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501964.1;locus_tag=LNP58_RS13005;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_011260259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2746818 2747441 . - . ID=gene-LNP58_RS13010;Name=LNP58_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13010;old_locus_tag=LNP58_12990 NZ_CP086372.1 Protein Homology CDS 2746818 2747441 . - 0 ID=cds-WP_011260258.1;Parent=gene-LNP58_RS13010;Dbxref=Genbank:WP_011260258.1;Name=WP_011260258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035933.1;locus_tag=LNP58_RS13010;product=hypothetical protein;protein_id=WP_011260258.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 2747659 2747834 . + . ID=id-NZ_CP086372.1:2747659..2747834;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq gene 2748002 2748604 . + . ID=gene-LNP58_RS13015;Name=LNP58_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13015;old_locus_tag=LNP58_12995 NZ_CP086372.1 Protein Homology CDS 2748002 2748604 . + 0 ID=cds-WP_011260257.1;Parent=gene-LNP58_RS13015;Dbxref=Genbank:WP_011260257.1;Name=WP_011260257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576782.1;locus_tag=LNP58_RS13015;product=riboflavin synthase;protein_id=WP_011260257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2748601 2749740 . + . ID=gene-LNP58_RS13020;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LNP58_RS13020;old_locus_tag=LNP58_13000 NZ_CP086372.1 Protein Homology CDS 2748601 2749740 . + 0 ID=cds-WP_011260256.1;Parent=gene-LNP58_RS13020;Dbxref=Genbank:WP_011260256.1;Name=WP_011260256.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444173.1;locus_tag=LNP58_RS13020;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_011260256.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2750054 2750518 . + . ID=gene-LNP58_RS13025;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LNP58_RS13025;old_locus_tag=LNP58_13005 NZ_CP086372.1 Protein Homology CDS 2750054 2750518 . + 0 ID=cds-WP_011409394.1;Parent=gene-LNP58_RS13025;Dbxref=Genbank:WP_011409394.1;Name=WP_011409394.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409394.1;locus_tag=LNP58_RS13025;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_011409394.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2750515 2750985 . + . ID=gene-LNP58_RS13030;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LNP58_RS13030;old_locus_tag=LNP58_13010 NZ_CP086372.1 Protein Homology CDS 2750515 2750985 . + 0 ID=cds-WP_011260254.1;Parent=gene-LNP58_RS13030;Dbxref=Genbank:WP_011260254.1;Name=WP_011260254.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968663.1;locus_tag=LNP58_RS13030;product=transcription antitermination factor NusB;protein_id=WP_011260254.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2751206 2752180 . + . ID=gene-LNP58_RS13035;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LNP58_RS13035;old_locus_tag=LNP58_13015 NZ_CP086372.1 Protein Homology CDS 2751206 2752180 . + 0 ID=cds-WP_011409393.1;Parent=gene-LNP58_RS13035;Dbxref=Genbank:WP_011409393.1;Name=WP_011409393.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925283.1;locus_tag=LNP58_RS13035;product=thiamine-phosphate kinase;protein_id=WP_011409393.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2752479 2753503 . + . ID=gene-LNP58_RS13040;Name=LNP58_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13040;old_locus_tag=LNP58_13020;pseudo=true NZ_CP086372.1 Protein Homology CDS 2752479 2753503 . + 0 ID=cds-LNP58_RS13040;Parent=gene-LNP58_RS13040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501973.1;locus_tag=LNP58_RS13040;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2753787 2754827 . + . ID=gene-LNP58_RS13045;Name=LNP58_RS13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13045;old_locus_tag=LNP58_13025;partial=true;pseudo=true;start_range=.,2753787 NZ_CP086372.1 Protein Homology CDS 2753787 2754827 . + 0 ID=cds-LNP58_RS13045;Parent=gene-LNP58_RS13045;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501974.1;locus_tag=LNP58_RS13045;partial=true;product=F-box domain-containing protein;pseudo=true;start_range=.,2753787;transl_table=11 NZ_CP086372.1 RefSeq gene 2755277 2755369 . + . ID=gene-LNP58_RS13050;Name=LNP58_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13050;old_locus_tag=LNP58_13030 NZ_CP086372.1 Protein Homology CDS 2755277 2755369 . + 0 ID=cds-WP_006452907.1;Parent=gene-LNP58_RS13050;Dbxref=Genbank:WP_006452907.1;Name=WP_006452907.1;Ontology_term=GO:0043462,GO:0008556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452907.1;locus_tag=LNP58_RS13050;product=potassium-transporting ATPase subunit F;protein_id=WP_006452907.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2755385 2757178 . + . ID=gene-LNP58_RS13055;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LNP58_RS13055;old_locus_tag=LNP58_13035 NZ_CP086372.1 Protein Homology CDS 2755385 2757178 . + 0 ID=cds-WP_069963895.1;Parent=gene-LNP58_RS13055;Dbxref=Genbank:WP_069963895.1;Name=WP_069963895.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490514.1;locus_tag=LNP58_RS13055;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_069963895.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2757191 2759239 . + . ID=gene-LNP58_RS13060;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LNP58_RS13060;old_locus_tag=LNP58_13040 NZ_CP086372.1 Protein Homology CDS 2757191 2759239 . + 0 ID=cds-WP_011260249.1;Parent=gene-LNP58_RS13060;Dbxref=Genbank:WP_011260249.1;Name=WP_011260249.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260249.1;locus_tag=LNP58_RS13060;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_011260249.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2759280 2759909 . + . ID=gene-LNP58_RS13065;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LNP58_RS13065;old_locus_tag=LNP58_13045 NZ_CP086372.1 Protein Homology CDS 2759280 2759909 . + 0 ID=cds-WP_011409390.1;Parent=gene-LNP58_RS13065;Dbxref=Genbank:WP_011409390.1;Name=WP_011409390.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490511.1;locus_tag=LNP58_RS13065;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_011409390.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2759961 2762621 . + . ID=gene-LNP58_RS13070;Name=LNP58_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13070;old_locus_tag=LNP58_13050 NZ_CP086372.1 Protein Homology CDS 2759961 2762621 . + 0 ID=cds-WP_011260247.1;Parent=gene-LNP58_RS13070;Dbxref=Genbank:WP_011260247.1;Name=WP_011260247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849531.1;locus_tag=LNP58_RS13070;product=sensor histidine kinase KdpD;protein_id=WP_011260247.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2762611 2763327 . + . ID=gene-LNP58_RS13075;Name=LNP58_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13075;old_locus_tag=LNP58_13055 NZ_CP086372.1 Protein Homology CDS 2762611 2763327 . + 0 ID=cds-WP_011409389.1;Parent=gene-LNP58_RS13075;Dbxref=Genbank:WP_011409389.1;Name=WP_011409389.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158836.1;locus_tag=LNP58_RS13075;product=response regulator;protein_id=WP_011409389.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2763341 2764726 . - . ID=gene-LNP58_RS13080;Name=LNP58_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13080;old_locus_tag=LNP58_13060 NZ_CP086372.1 Protein Homology CDS 2763341 2764726 . - 0 ID=cds-WP_011409388.1;Parent=gene-LNP58_RS13080;Dbxref=Genbank:WP_011409388.1;Name=WP_011409388.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115489.1;locus_tag=LNP58_RS13080;product=FAD-binding protein;protein_id=WP_011409388.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2764723 2765262 . - . ID=gene-LNP58_RS13085;Name=LNP58_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13085;old_locus_tag=LNP58_13065 NZ_CP086372.1 Protein Homology CDS 2764723 2765262 . - 0 ID=cds-WP_011409387.1;Parent=gene-LNP58_RS13085;Dbxref=Genbank:WP_011409387.1;Name=WP_011409387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910944.1;locus_tag=LNP58_RS13085;product=metal-dependent hydrolase;protein_id=WP_011409387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2765292 2765660 . - . ID=gene-LNP58_RS13090;Name=LNP58_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13090;old_locus_tag=LNP58_13070 NZ_CP086372.1 Protein Homology CDS 2765292 2765660 . - 0 ID=cds-WP_011409386.1;Parent=gene-LNP58_RS13090;Dbxref=Genbank:WP_011409386.1;Name=WP_011409386.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571510.1;locus_tag=LNP58_RS13090;product=YraN family protein;protein_id=WP_011409386.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2765665 2767356 . - . ID=gene-LNP58_RS13095;Name=LNP58_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13095;old_locus_tag=LNP58_13075 NZ_CP086372.1 Protein Homology CDS 2765665 2767356 . - 0 ID=cds-WP_027703224.1;Parent=gene-LNP58_RS13095;Dbxref=Genbank:WP_027703224.1;Name=WP_027703224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160278.1;locus_tag=LNP58_RS13095;product=penicillin-binding protein activator;protein_id=WP_027703224.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2767477 2768298 . + . ID=gene-LNP58_RS13100;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LNP58_RS13100;old_locus_tag=LNP58_13080 NZ_CP086372.1 Protein Homology CDS 2767477 2768298 . + 0 ID=cds-WP_011409385.1;Parent=gene-LNP58_RS13100;Dbxref=Genbank:WP_011409385.1;Name=WP_011409385.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035951.1;locus_tag=LNP58_RS13100;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011409385.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2768445 2768794 . + . ID=gene-LNP58_RS13105;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LNP58_RS13105;old_locus_tag=LNP58_13085 NZ_CP086372.1 cmsearch RNase_P_RNA 2768445 2768794 . + . ID=rna-LNP58_RS13105;Parent=gene-LNP58_RS13105;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13105;product=RNase P RNA component class A NZ_CP086372.1 cmsearch exon 2768445 2768794 . + . ID=exon-LNP58_RS13105-1;Parent=rna-LNP58_RS13105;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13105;product=RNase P RNA component class A NZ_CP086372.1 RefSeq pseudogene 2768911 2769126 . - . ID=gene-LNP58_RS13110;Name=LNP58_RS13110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13110;old_locus_tag=LNP58_13090;partial=true;pseudo=true;start_range=.,2768911 NZ_CP086372.1 Protein Homology CDS 2768911 2769126 . - 0 ID=cds-LNP58_RS13110;Parent=gene-LNP58_RS13110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988736.1;locus_tag=LNP58_RS13110;partial=true;product=type II toxin-antitoxin system CcdA family antitoxin;pseudo=true;start_range=.,2768911;transl_table=11 NZ_CP086372.1 RefSeq gene 2769175 2769942 . - . ID=gene-LNP58_RS13115;Name=LNP58_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13115;old_locus_tag=LNP58_13095 NZ_CP086372.1 Protein Homology CDS 2769175 2769942 . - 0 ID=cds-WP_075242170.1;Parent=gene-LNP58_RS13115;Dbxref=Genbank:WP_075242170.1;Name=WP_075242170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485298.1;locus_tag=LNP58_RS13115;product=NRDE family protein;protein_id=WP_075242170.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2770257 2770712 . + . ID=gene-LNP58_RS13120;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LNP58_RS13120;old_locus_tag=LNP58_13100 NZ_CP086372.1 Protein Homology CDS 2770257 2770712 . + 0 ID=cds-WP_011260238.1;Parent=gene-LNP58_RS13120;Dbxref=Genbank:WP_011260238.1;Name=WP_011260238.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367651.1;locus_tag=LNP58_RS13120;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_011260238.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2770728 2771771 . + . ID=gene-LNP58_RS13125;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LNP58_RS13125;old_locus_tag=LNP58_13105 NZ_CP086372.1 Protein Homology CDS 2770728 2771771 . + 0 ID=cds-WP_011409381.1;Parent=gene-LNP58_RS13125;Dbxref=Genbank:WP_011409381.1;Name=WP_011409381.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299913.1;locus_tag=LNP58_RS13125;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011409381.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2771768 2772031 . + . ID=gene-LNP58_RS13130;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LNP58_RS13130;old_locus_tag=LNP58_13110 NZ_CP086372.1 Protein Homology CDS 2771768 2772031 . + 0 ID=cds-WP_011409380.1;Parent=gene-LNP58_RS13130;Dbxref=Genbank:WP_011409380.1;Name=WP_011409380.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344441.1;locus_tag=LNP58_RS13130;product=cell division protein FtsL;protein_id=WP_011409380.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2772171 2774039 . + . ID=gene-LNP58_RS13135;Name=LNP58_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13135;old_locus_tag=LNP58_13115 NZ_CP086372.1 Protein Homology CDS 2772171 2774039 . + 0 ID=cds-WP_011409379.1;Parent=gene-LNP58_RS13135;Dbxref=Genbank:WP_011409379.1;Name=WP_011409379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381784.1;locus_tag=LNP58_RS13135;product=penicillin-binding protein 2;protein_id=WP_011409379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2774048 2775523 . + . ID=gene-LNP58_RS13140;Name=LNP58_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13140;old_locus_tag=LNP58_13120 NZ_CP086372.1 Protein Homology CDS 2774048 2775523 . + 0 ID=cds-WP_080493528.1;Parent=gene-LNP58_RS13140;Dbxref=Genbank:WP_080493528.1;Name=WP_080493528.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346420.1;locus_tag=LNP58_RS13140;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080493528.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2775520 2777031 . + . ID=gene-LNP58_RS13145;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LNP58_RS13145;old_locus_tag=LNP58_13125 NZ_CP086372.1 Protein Homology CDS 2775520 2777031 . + 0 ID=cds-WP_011409378.1;Parent=gene-LNP58_RS13145;Dbxref=Genbank:WP_011409378.1;Name=WP_011409378.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485287.1;locus_tag=LNP58_RS13145;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011409378.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2777021 2778106 . + . ID=gene-LNP58_RS13150;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LNP58_RS13150;old_locus_tag=LNP58_13130 NZ_CP086372.1 Protein Homology CDS 2777021 2778106 . + 0 ID=cds-WP_011260232.1;Parent=gene-LNP58_RS13150;Dbxref=Genbank:WP_011260232.1;Name=WP_011260232.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=LNP58_RS13150;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_011260232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2778106 2779479 . + . ID=gene-LNP58_RS13155;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LNP58_RS13155;old_locus_tag=LNP58_13135 NZ_CP086372.1 Protein Homology CDS 2778106 2779479 . + 0 ID=cds-WP_011409377.1;Parent=gene-LNP58_RS13155;Dbxref=Genbank:WP_011409377.1;Name=WP_011409377.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155392.1;locus_tag=LNP58_RS13155;product=putative lipid II flippase FtsW;protein_id=WP_011409377.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2779476 2780801 . + . ID=gene-LNP58_RS13160;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LNP58_RS13160;old_locus_tag=LNP58_13140 NZ_CP086372.1 Protein Homology CDS 2779476 2780801 . + 0 ID=cds-WP_011260230.1;Parent=gene-LNP58_RS13160;Dbxref=Genbank:WP_011260230.1;Name=WP_011260230.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260230.1;locus_tag=LNP58_RS13160;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_011260230.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2780798 2782231 . + . ID=gene-LNP58_RS13165;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LNP58_RS13165;old_locus_tag=LNP58_13145 NZ_CP086372.1 Protein Homology CDS 2780798 2782231 . + 0 ID=cds-WP_011409375.1;Parent=gene-LNP58_RS13165;Dbxref=Genbank:WP_011409375.1;Name=WP_011409375.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165008.1;locus_tag=LNP58_RS13165;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_011409375.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2782228 2783184 . + . ID=gene-LNP58_RS13170;Name=LNP58_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13170;old_locus_tag=LNP58_13150 NZ_CP086372.1 Protein Homology CDS 2782228 2783184 . + 0 ID=cds-WP_012444189.1;Parent=gene-LNP58_RS13170;Dbxref=Genbank:WP_012444189.1;Name=WP_012444189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485275.1;locus_tag=LNP58_RS13170;product=D-alanine--D-alanine ligase;protein_id=WP_012444189.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2783309 2784130 . + . ID=gene-LNP58_RS13175;Name=LNP58_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13175;old_locus_tag=LNP58_13155 NZ_CP086372.1 Protein Homology CDS 2783309 2784130 . + 0 ID=cds-WP_069959993.1;Parent=gene-LNP58_RS13175;Dbxref=Genbank:WP_069959993.1;Name=WP_069959993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501996.1;locus_tag=LNP58_RS13175;product=cell division protein FtsQ/DivIB;protein_id=WP_069959993.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2784134 2785369 . + . ID=gene-LNP58_RS13180;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LNP58_RS13180;old_locus_tag=LNP58_13160 NZ_CP086372.1 Protein Homology CDS 2784134 2785369 . + 0 ID=cds-WP_012444190.1;Parent=gene-LNP58_RS13180;Dbxref=Genbank:WP_012444190.1;Name=WP_012444190.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=LNP58_RS13180;product=cell division protein FtsA;protein_id=WP_012444190.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2785672 2786916 . + . ID=gene-LNP58_RS13185;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LNP58_RS13185;old_locus_tag=LNP58_13165 NZ_CP086372.1 Protein Homology CDS 2785672 2786916 . + 0 ID=cds-WP_011260226.1;Parent=gene-LNP58_RS13185;Dbxref=Genbank:WP_011260226.1;Name=WP_011260226.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170527.1;locus_tag=LNP58_RS13185;product=cell division protein FtsZ;protein_id=WP_011260226.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2787158 2788069 . + . ID=gene-LNP58_RS13190;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LNP58_RS13190;old_locus_tag=LNP58_13170 NZ_CP086372.1 Protein Homology CDS 2787158 2788069 . + 0 ID=cds-WP_011260225.1;Parent=gene-LNP58_RS13190;Dbxref=Genbank:WP_011260225.1;Name=WP_011260225.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237961.1;locus_tag=LNP58_RS13190;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_011260225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2788256 2788702 . - . ID=gene-LNP58_RS13195;Name=LNP58_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13195;old_locus_tag=LNP58_13175 NZ_CP086372.1 Protein Homology CDS 2788256 2788702 . - 0 ID=cds-WP_069959992.1;Parent=gene-LNP58_RS13195;Dbxref=Genbank:WP_069959992.1;Name=WP_069959992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571812.1;locus_tag=LNP58_RS13195;product=DUF721 domain-containing protein;protein_id=WP_069959992.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2788703 2789644 . + . ID=gene-LNP58_RS13200;Name=LNP58_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13200;old_locus_tag=LNP58_13180 NZ_CP086372.1 Protein Homology CDS 2788703 2789644 . + 0 ID=cds-WP_011409372.1;Parent=gene-LNP58_RS13200;Dbxref=Genbank:WP_011409372.1;Name=WP_011409372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158828.1;locus_tag=LNP58_RS13200;product=M23 family metallopeptidase;protein_id=WP_011409372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2789801 2792539 . + . ID=gene-LNP58_RS13205;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LNP58_RS13205;old_locus_tag=LNP58_13185 NZ_CP086372.1 Protein Homology CDS 2789801 2792539 . + 0 ID=cds-WP_011260222.1;Parent=gene-LNP58_RS13205;Dbxref=Genbank:WP_011260222.1;Name=WP_011260222.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112773.1;locus_tag=LNP58_RS13205;product=preprotein translocase subunit SecA;protein_id=WP_011260222.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2793004 2793372 . + . ID=gene-LNP58_RS13210;Name=LNP58_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13210;old_locus_tag=LNP58_13190 NZ_CP086372.1 Protein Homology CDS 2793004 2793372 . + 0 ID=cds-WP_011409371.1;Parent=gene-LNP58_RS13210;Dbxref=Genbank:WP_011409371.1;Name=WP_011409371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506680.1;locus_tag=LNP58_RS13210;product=glyoxalase;protein_id=WP_011409371.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2793513 2794460 . + . ID=gene-LNP58_RS13215;Name=LNP58_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13215;old_locus_tag=LNP58_13195 NZ_CP086372.1 Protein Homology CDS 2793513 2794460 . + 0 ID=cds-WP_011260220.1;Parent=gene-LNP58_RS13215;Dbxref=Genbank:WP_011260220.1;Name=WP_011260220.1;Ontology_term=GO:0008413;gbkey=CDS;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910877.1;locus_tag=LNP58_RS13215;product=Nudix family hydrolase;protein_id=WP_011260220.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2794646 2795233 . - . ID=gene-LNP58_RS13220;Name=LNP58_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13220;old_locus_tag=LNP58_13200 NZ_CP086372.1 Protein Homology CDS 2794646 2795233 . - 0 ID=cds-WP_011260218.1;Parent=gene-LNP58_RS13220;Dbxref=Genbank:WP_011260218.1;Name=WP_011260218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155380.1;locus_tag=LNP58_RS13220;product=hypothetical protein;protein_id=WP_011260218.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2795347 2795423 . - . ID=gene-LNP58_RS13225;Name=LNP58_RS13225;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13225;old_locus_tag=LNP58_13205 NZ_CP086372.1 cmsearch ncRNA 2795347 2795423 . - . ID=rna-LNP58_RS13225;Parent=gene-LNP58_RS13225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13225;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2795347 2795423 . - . ID=exon-LNP58_RS13225-1;Parent=rna-LNP58_RS13225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13225;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2795606 2796433 . - . ID=gene-LNP58_RS13230;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LNP58_RS13230;old_locus_tag=LNP58_13210 NZ_CP086372.1 Protein Homology CDS 2795606 2796433 . - 0 ID=cds-WP_011260216.1;Parent=gene-LNP58_RS13230;Dbxref=Genbank:WP_011260216.1;Name=WP_011260216.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155379.1;locus_tag=LNP58_RS13230;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_011260216.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2796473 2797855 . - . ID=gene-LNP58_RS13235;Name=LNP58_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13235;old_locus_tag=LNP58_13215 NZ_CP086372.1 Protein Homology CDS 2796473 2797855 . - 0 ID=cds-WP_075242169.1;Parent=gene-LNP58_RS13235;Dbxref=Genbank:WP_075242169.1;Name=WP_075242169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346430.1;locus_tag=LNP58_RS13235;product=hypothetical protein;protein_id=WP_075242169.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2798346 2799323 . + . ID=gene-LNP58_RS13240;Name=LNP58_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13240;old_locus_tag=LNP58_13220 NZ_CP086372.1 Protein Homology CDS 2798346 2799323 . + 0 ID=cds-WP_011260213.1;Parent=gene-LNP58_RS13240;Dbxref=Genbank:WP_011260213.1;Name=WP_011260213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812340.1;locus_tag=LNP58_RS13240;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_011260213.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2799620 2800150 . + . ID=gene-LNP58_RS13245;Name=LNP58_RS13245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13245;old_locus_tag=LNP58_13225;partial=true;pseudo=true;start_range=.,2799620 NZ_CP086372.1 Protein Homology CDS 2799620 2800150 . + 0 ID=cds-LNP58_RS13245;Parent=gene-LNP58_RS13245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160284.1;locus_tag=LNP58_RS13245;partial=true;product=S8 family serine peptidase;pseudo=true;start_range=.,2799620;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2800230 2800633 . - . ID=gene-LNP58_RS13250;Name=LNP58_RS13250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13250;old_locus_tag=LNP58_13230;pseudo=true NZ_CP086372.1 Protein Homology CDS 2800230 2800633 . - 0 ID=cds-LNP58_RS13250;Parent=gene-LNP58_RS13250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968728.1;locus_tag=LNP58_RS13250;product=VOC family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2801011 2801946 . + . ID=gene-LNP58_RS13255;Name=LNP58_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13255;old_locus_tag=LNP58_13235 NZ_CP086372.1 Protein Homology CDS 2801011 2801946 . + 0 ID=cds-WP_069959991.1;Parent=gene-LNP58_RS13255;Dbxref=Genbank:WP_069959991.1;Name=WP_069959991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485244.1;locus_tag=LNP58_RS13255;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_069959991.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2802387 2802463 . + . ID=gene-LNP58_RS13260;Name=LNP58_RS13260;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13260;old_locus_tag=LNP58_13240 NZ_CP086372.1 cmsearch ncRNA 2802387 2802463 . + . ID=rna-LNP58_RS13260;Parent=gene-LNP58_RS13260;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13260;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2802387 2802463 . + . ID=exon-LNP58_RS13260-1;Parent=rna-LNP58_RS13260;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13260;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2803282 2803827 . + . ID=gene-LNP58_RS13265;Name=LNP58_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13265;old_locus_tag=LNP58_13245 NZ_CP086372.1 Protein Homology CDS 2803282 2803827 . + 0 ID=cds-WP_011260209.1;Parent=gene-LNP58_RS13265;Dbxref=Genbank:WP_011260209.1;Name=WP_011260209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260209.1;locus_tag=LNP58_RS13265;product=DUF2058 domain-containing protein;protein_id=WP_011260209.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2804056 2804613 . + . ID=gene-LNP58_RS13270;Name=LNP58_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13270;old_locus_tag=LNP58_13250 NZ_CP086372.1 Protein Homology CDS 2804056 2804613 . + 0 ID=cds-WP_075242167.1;Parent=gene-LNP58_RS13270;Dbxref=Genbank:WP_075242167.1;Name=WP_075242167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158826.1;locus_tag=LNP58_RS13270;product=DUF3228 family protein;protein_id=WP_075242167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2804764 2805450 . + . ID=gene-LNP58_RS13275;Name=LNP58_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13275;old_locus_tag=LNP58_13255 NZ_CP086372.1 Protein Homology CDS 2804764 2805450 . + 0 ID=cds-WP_014502013.1;Parent=gene-LNP58_RS13275;Dbxref=Genbank:WP_014502013.1;Name=WP_014502013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155370.1;locus_tag=LNP58_RS13275;product=hypothetical protein;protein_id=WP_014502013.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2805941 2806873 . + . ID=gene-LNP58_RS13280;Name=LNP58_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13280;old_locus_tag=LNP58_13260 NZ_CP086372.1 Protein Homology CDS 2805941 2806873 . + 0 ID=cds-WP_011260206.1;Parent=gene-LNP58_RS13280;Dbxref=Genbank:WP_011260206.1;Name=WP_011260206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155369.1;locus_tag=LNP58_RS13280;product=sulfotransferase domain-containing protein;protein_id=WP_011260206.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2806970 2807137 . - . ID=gene-LNP58_RS13285;Name=LNP58_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13285;old_locus_tag=LNP58_13265 NZ_CP086372.1 GeneMarkS-2+ CDS 2806970 2807137 . - 0 ID=cds-WP_228329770.1;Parent=gene-LNP58_RS13285;Dbxref=Genbank:WP_228329770.1;Name=WP_228329770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13285;product=hypothetical protein;protein_id=WP_228329770.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2807067 2807690 . + . ID=gene-LNP58_RS13290;Name=LNP58_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13290;old_locus_tag=LNP58_13270 NZ_CP086372.1 Protein Homology CDS 2807067 2807690 . + 0 ID=cds-WP_228329760.1;Parent=gene-LNP58_RS13290;Dbxref=Genbank:WP_228329760.1;Name=WP_228329760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160285.1;locus_tag=LNP58_RS13290;product=class I SAM-dependent methyltransferase;protein_id=WP_228329760.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2807922 2809364 . - . ID=gene-LNP58_RS13295;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LNP58_RS13295;old_locus_tag=LNP58_13275 NZ_CP086372.1 Protein Homology CDS 2807922 2809364 . - 0 ID=cds-WP_011260204.1;Parent=gene-LNP58_RS13295;Dbxref=Genbank:WP_011260204.1;Name=WP_011260204.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035988.1;locus_tag=LNP58_RS13295;product=adenosylhomocysteinase;protein_id=WP_011260204.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 2809397 2809512 . - . ID=id-NZ_CP086372.1:2809397..2809512;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq pseudogene 2809765 2810088 . + . ID=gene-LNP58_RS13300;Name=LNP58_RS13300;end_range=2810088,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13300;old_locus_tag=LNP58_13280;partial=true;pseudo=true;start_range=.,2809765 NZ_CP086372.1 Protein Homology CDS 2809765 2810088 . + 0 ID=cds-LNP58_RS13300;Parent=gene-LNP58_RS13300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=2810088,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158615.1;locus_tag=LNP58_RS13300;partial=true;product=prolyl oligopeptidase family serine peptidase;pseudo=true;start_range=.,2809765;transl_table=11 NZ_CP086372.1 RefSeq gene 2810417 2813131 . + . ID=gene-LNP58_RS13305;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LNP58_RS13305;old_locus_tag=LNP58_13285 NZ_CP086372.1 Protein Homology CDS 2810417 2813131 . + 0 ID=cds-WP_044756465.1;Parent=gene-LNP58_RS13305;Dbxref=Genbank:WP_044756465.1;Name=WP_044756465.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155365.1;locus_tag=LNP58_RS13305;product=phosphoenolpyruvate carboxylase;protein_id=WP_044756465.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2813269 2813826 . + . ID=gene-LNP58_RS13310;Name=LNP58_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13310;old_locus_tag=LNP58_13290 NZ_CP086372.1 Protein Homology CDS 2813269 2813826 . + 0 ID=cds-WP_024710449.1;Parent=gene-LNP58_RS13310;Dbxref=Genbank:WP_024710449.1;Name=WP_024710449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112764.1;locus_tag=LNP58_RS13310;product=TetR/AcrR family transcriptional regulator;protein_id=WP_024710449.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2813890 2814177 . - . ID=gene-LNP58_RS13315;Name=LNP58_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13315;old_locus_tag=LNP58_13295 NZ_CP086372.1 GeneMarkS-2+ CDS 2813890 2814177 . - 0 ID=cds-WP_228329629.1;Parent=gene-LNP58_RS13315;Dbxref=Genbank:WP_228329629.1;Name=WP_228329629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13315;product=hypothetical protein;protein_id=WP_228329629.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2814341 2815660 . - . ID=gene-LNP58_RS13320;Name=LNP58_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13320;old_locus_tag=LNP58_13300 NZ_CP086372.1 Protein Homology CDS 2814341 2815660 . - 0 ID=cds-WP_109181915.1;Parent=gene-LNP58_RS13320;Dbxref=Genbank:WP_109181915.1;Name=WP_109181915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS13320;product=IS701-like element ISXo15 family transposase;protein_id=WP_109181915.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2816579 2816803 . - . ID=gene-LNP58_RS13325;Name=LNP58_RS13325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13325;old_locus_tag=LNP58_13305;partial=true;pseudo=true;start_range=.,2816579 NZ_CP086372.1 Protein Homology CDS 2816579 2816803 . - 0 ID=cds-LNP58_RS13325;Parent=gene-LNP58_RS13325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155362.1;locus_tag=LNP58_RS13325;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2816579;transl_table=11 NZ_CP086372.1 RefSeq gene 2816802 2819558 . + . ID=gene-LNP58_RS13330;Name=LNP58_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13330;old_locus_tag=LNP58_13310 NZ_CP086372.1 Protein Homology CDS 2816802 2819558 . + 0 ID=cds-WP_011409360.1;Parent=gene-LNP58_RS13330;Dbxref=Genbank:WP_011409360.1;Name=WP_011409360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910823.1;locus_tag=LNP58_RS13330;product=TonB-dependent receptor;protein_id=WP_011409360.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2819548 2821146 . + . ID=gene-LNP58_RS13335;Name=LNP58_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13335;old_locus_tag=LNP58_13315 NZ_CP086372.1 Protein Homology CDS 2819548 2821146 . + 0 ID=cds-WP_011260198.1;Parent=gene-LNP58_RS13335;Dbxref=Genbank:WP_011260198.1;Name=WP_011260198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159806.1;locus_tag=LNP58_RS13335;product=histidine-type phosphatase;protein_id=WP_011260198.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2821198 2821961 . + . ID=gene-LNP58_RS13340;Name=LNP58_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13340;old_locus_tag=LNP58_13320 NZ_CP086372.1 Protein Homology CDS 2821198 2821513 . + 0 ID=cds-WP_094187715.1-6;Parent=gene-LNP58_RS13340;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS13340;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2821513 2821961 . + 2 ID=cds-WP_094187715.1-6;Parent=gene-LNP58_RS13340;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS13340;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2822307 2823518 . - . ID=gene-LNP58_RS13345;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LNP58_RS13345;old_locus_tag=LNP58_13325 NZ_CP086372.1 Protein Homology CDS 2822307 2823518 . - 0 ID=cds-WP_005910819.1;Parent=gene-LNP58_RS13345;Dbxref=Genbank:WP_005910819.1;Name=WP_005910819.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=LNP58_RS13345;product=methionine adenosyltransferase;protein_id=WP_005910819.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2823764 2824860 . + . ID=gene-LNP58_RS13350;Name=LNP58_RS13350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13350;old_locus_tag=LNP58_13330;pseudo=true NZ_CP086372.1 Protein Homology CDS 2823764 2824860 . + 0 ID=cds-LNP58_RS13350;Parent=gene-LNP58_RS13350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970626.1;locus_tag=LNP58_RS13350;product=metal-dependent hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2824857 2825679 . - . ID=gene-LNP58_RS13355;Name=LNP58_RS13355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13355;old_locus_tag=LNP58_13335;partial=true;pseudo=true;start_range=.,2824857 NZ_CP086372.1 Protein Homology CDS 2824857 2825679 . - 0 ID=cds-LNP58_RS13355;Parent=gene-LNP58_RS13355;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485197.1;locus_tag=LNP58_RS13355;partial=true;product=methyltransferase domain-containing protein;pseudo=true;start_range=.,2824857;transl_table=11 NZ_CP086372.1 RefSeq gene 2825707 2826705 . - . ID=gene-LNP58_RS13360;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LNP58_RS13360;old_locus_tag=LNP58_13340 NZ_CP086372.1 Protein Homology CDS 2825707 2826705 . - 0 ID=cds-WP_011260196.1;Parent=gene-LNP58_RS13360;Dbxref=Genbank:WP_011260196.1;Name=WP_011260196.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050554.1;locus_tag=LNP58_RS13360;product=tRNA dihydrouridine synthase DusB;protein_id=WP_011260196.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2826815 2828908 . - . ID=gene-LNP58_RS13365;Name=LNP58_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13365;old_locus_tag=LNP58_13345 NZ_CP086372.1 Protein Homology CDS 2826815 2828908 . - 0 ID=cds-WP_027704209.1;Parent=gene-LNP58_RS13365;Dbxref=Genbank:WP_027704209.1;Name=WP_027704209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930931.1;locus_tag=LNP58_RS13365;product=carbohydrate-binding protein;protein_id=WP_027704209.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2829589 2830539 . - . ID=gene-LNP58_RS13370;Name=LNP58_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13370;old_locus_tag=LNP58_13350 NZ_CP086372.1 Protein Homology CDS 2829589 2830539 . - 0 ID=cds-WP_011409356.1;Parent=gene-LNP58_RS13370;Dbxref=Genbank:WP_011409356.1;Name=WP_011409356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167865.1;locus_tag=LNP58_RS13370;product=ribokinase;protein_id=WP_011409356.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2830631 2831929 . - . ID=gene-LNP58_RS13375;Name=LNP58_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13375;old_locus_tag=LNP58_13355 NZ_CP086372.1 Protein Homology CDS 2830631 2831929 . - 0 ID=cds-WP_011409355.1;Parent=gene-LNP58_RS13375;Dbxref=Genbank:WP_011409355.1;Name=WP_011409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304462.1;locus_tag=LNP58_RS13375;product=nucleoside transporter NupC;protein_id=WP_011409355.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2832229 2832603 . - . ID=gene-LNP58_RS13380;Name=LNP58_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13380;old_locus_tag=LNP58_13360 NZ_CP086372.1 GeneMarkS-2+ CDS 2832229 2832603 . - 0 ID=cds-WP_153303323.1;Parent=gene-LNP58_RS13380;Dbxref=Genbank:WP_153303323.1;Name=WP_153303323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13380;product=hypothetical protein;protein_id=WP_153303323.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2833128 2834096 . + . ID=gene-LNP58_RS13385;Name=LNP58_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13385;old_locus_tag=LNP58_13365 NZ_CP086372.1 Protein Homology CDS 2833128 2834096 . + 0 ID=cds-WP_011409354.1;Parent=gene-LNP58_RS13385;Dbxref=Genbank:WP_011409354.1;Name=WP_011409354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930920.1;locus_tag=LNP58_RS13385;product=aldo/keto reductase;protein_id=WP_011409354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2834477 2834716 . + . ID=gene-LNP58_RS13390;Name=LNP58_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13390;old_locus_tag=LNP58_13370 NZ_CP086372.1 Protein Homology CDS 2834477 2834716 . + 0 ID=cds-WP_027704205.1;Parent=gene-LNP58_RS13390;Dbxref=Genbank:WP_027704205.1;Name=WP_027704205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269995.1;locus_tag=LNP58_RS13390;product=hemin uptake protein HemP;protein_id=WP_027704205.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2834740 2834816 . - . ID=gene-LNP58_RS13395;Name=LNP58_RS13395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13395;old_locus_tag=LNP58_13375 NZ_CP086372.1 cmsearch ncRNA 2834740 2834816 . - . ID=rna-LNP58_RS13395;Parent=gene-LNP58_RS13395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13395;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2834740 2834816 . - . ID=exon-LNP58_RS13395-1;Parent=rna-LNP58_RS13395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13395;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2835353 2836000 . + . ID=gene-LNP58_RS13400;Name=LNP58_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13400;old_locus_tag=LNP58_13380 NZ_CP086372.1 Protein Homology CDS 2835353 2836000 . + 0 ID=cds-WP_011409353.1;Parent=gene-LNP58_RS13400;Dbxref=Genbank:WP_011409353.1;Name=WP_011409353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409353.1;locus_tag=LNP58_RS13400;product=hypothetical protein;protein_id=WP_011409353.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2836063 2836139 . + . ID=gene-LNP58_RS13405;Name=LNP58_RS13405;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13405;old_locus_tag=LNP58_13385 NZ_CP086372.1 cmsearch ncRNA 2836063 2836139 . + . ID=rna-LNP58_RS13405;Parent=gene-LNP58_RS13405;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13405;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2836063 2836139 . + . ID=exon-LNP58_RS13405-1;Parent=rna-LNP58_RS13405;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13405;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2836159 2836233 . - . ID=gene-LNP58_RS13410;Name=LNP58_RS13410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13410;old_locus_tag=LNP58_13390 NZ_CP086372.1 cmsearch ncRNA 2836159 2836233 . - . ID=rna-LNP58_RS13410;Parent=gene-LNP58_RS13410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13410;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2836159 2836233 . - . ID=exon-LNP58_RS13410-1;Parent=rna-LNP58_RS13410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13410;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2836302 2836655 . - . ID=gene-LNP58_RS13415;Name=LNP58_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13415;old_locus_tag=LNP58_13395 NZ_CP086372.1 Protein Homology CDS 2836302 2836655 . - 0 ID=cds-WP_011260188.1;Parent=gene-LNP58_RS13415;Dbxref=Genbank:WP_011260188.1;Name=WP_011260188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303348.1;locus_tag=LNP58_RS13415;product=DMT family protein;protein_id=WP_011260188.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2836738 2837623 . - . ID=gene-LNP58_RS13420;Name=LNP58_RS13420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13420;old_locus_tag=LNP58_13400;pseudo=true NZ_CP086372.1 Protein Homology CDS 2836738 2837623 . - 0 ID=cds-LNP58_RS13420;Parent=gene-LNP58_RS13420;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160361.1;locus_tag=LNP58_RS13420;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2837620 2838452 . - . ID=gene-LNP58_RS13425;Name=LNP58_RS13425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13425;old_locus_tag=LNP58_13405;pseudo=true NZ_CP086372.1 Protein Homology CDS 2837620 2838452 . - 0 ID=cds-LNP58_RS13425;Parent=gene-LNP58_RS13425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972117.1;locus_tag=LNP58_RS13425;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2838456 2839502 . - . ID=gene-LNP58_RS13430;Name=LNP58_RS13430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13430;old_locus_tag=LNP58_13410;pseudo=true NZ_CP086372.1 Protein Homology CDS 2838456 2839502 . - 0 ID=cds-LNP58_RS13430;Parent=gene-LNP58_RS13430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346464.1;locus_tag=LNP58_RS13430;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2839544 2840461 . - . ID=gene-LNP58_RS13435;Name=LNP58_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13435;old_locus_tag=LNP58_13415 NZ_CP086372.1 Protein Homology CDS 2839544 2840461 . - 0 ID=cds-WP_011409349.1;Parent=gene-LNP58_RS13435;Dbxref=Genbank:WP_011409349.1;Name=WP_011409349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409349.1;locus_tag=LNP58_RS13435;product=TauD/TfdA family dioxygenase;protein_id=WP_011409349.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2840775 2843258 . - . ID=gene-LNP58_RS13440;Name=LNP58_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13440;old_locus_tag=LNP58_13420 NZ_CP086372.1 Protein Homology CDS 2840775 2843258 . - 0 ID=cds-WP_069959987.1;Parent=gene-LNP58_RS13440;Dbxref=Genbank:WP_069959987.1;Name=WP_069959987.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485158.1;locus_tag=LNP58_RS13440;product=FtsX-like permease family protein;protein_id=WP_069959987.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2843255 2843854 . - . ID=gene-LNP58_RS13445;Name=LNP58_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13445;old_locus_tag=LNP58_13425 NZ_CP086372.1 Protein Homology CDS 2843255 2843854 . - 0 ID=cds-WP_011260185.1;Parent=gene-LNP58_RS13445;Dbxref=Genbank:WP_011260185.1;Name=WP_011260185.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811879.1;locus_tag=LNP58_RS13445;product=ATP-binding cassette domain-containing protein;protein_id=WP_011260185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2843964 2844632 . + . ID=gene-LNP58_RS13450;Name=LNP58_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13450;old_locus_tag=LNP58_13430 NZ_CP086372.1 Protein Homology CDS 2843964 2844632 . + 0 ID=cds-WP_011260184.1;Parent=gene-LNP58_RS13450;Dbxref=Genbank:WP_011260184.1;Name=WP_011260184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260184.1;locus_tag=LNP58_RS13450;product=arylesterase;protein_id=WP_011260184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2844724 2845437 . + . ID=gene-LNP58_RS13455;Name=LNP58_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13455;old_locus_tag=LNP58_13435 NZ_CP086372.1 Protein Homology CDS 2844724 2845437 . + 0 ID=cds-WP_002811889.1;Parent=gene-LNP58_RS13455;Dbxref=Genbank:WP_002811889.1;Name=WP_002811889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661106.1;locus_tag=LNP58_RS13455;product=response regulator transcription factor;protein_id=WP_002811889.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2845580 2846851 . + . ID=gene-LNP58_RS13460;Name=LNP58_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13460;old_locus_tag=LNP58_13440 NZ_CP086372.1 Protein Homology CDS 2845580 2846851 . + 0 ID=cds-WP_011409346.1;Parent=gene-LNP58_RS13460;Dbxref=Genbank:WP_011409346.1;Name=WP_011409346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900779.1;locus_tag=LNP58_RS13460;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_011409346.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2847209 2847285 . + . ID=gene-LNP58_RS13465;Name=LNP58_RS13465;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13465;old_locus_tag=LNP58_13445 NZ_CP086372.1 cmsearch ncRNA 2847209 2847285 . + . ID=rna-LNP58_RS13465;Parent=gene-LNP58_RS13465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13465;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2847209 2847285 . + . ID=exon-LNP58_RS13465-1;Parent=rna-LNP58_RS13465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13465;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2847425 2848126 . - . ID=gene-LNP58_RS13470;Name=LNP58_RS13470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13470;old_locus_tag=LNP58_13450;pseudo=true NZ_CP086372.1 Protein Homology CDS 2847425 2848126 . - 0 ID=cds-LNP58_RS13470;Parent=gene-LNP58_RS13470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157323.1;locus_tag=LNP58_RS13470;product=SGNH/GDSL hydrolase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2848309 2848689 . + . ID=gene-LNP58_RS13475;Name=LNP58_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13475;old_locus_tag=LNP58_13455 NZ_CP086372.1 Protein Homology CDS 2848309 2848689 . + 0 ID=cds-WP_011409344.1;Parent=gene-LNP58_RS13475;Dbxref=Genbank:WP_011409344.1;Name=WP_011409344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573596.1;locus_tag=LNP58_RS13475;product=diacylglycerol kinase;protein_id=WP_011409344.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2848785 2849423 . + . ID=gene-LNP58_RS13480;Name=LNP58_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13480;old_locus_tag=LNP58_13460 NZ_CP086372.1 Protein Homology CDS 2848785 2849423 . + 0 ID=cds-WP_041182264.1;Parent=gene-LNP58_RS13480;Dbxref=Genbank:WP_041182264.1;Name=WP_041182264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381647.1;locus_tag=LNP58_RS13480;product=LemA family protein;protein_id=WP_041182264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2849761 2850651 . + . ID=gene-LNP58_RS13485;Name=LNP58_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13485;old_locus_tag=LNP58_13465 NZ_CP086372.1 Protein Homology CDS 2849761 2850651 . + 0 ID=cds-WP_027704105.1;Parent=gene-LNP58_RS13485;Dbxref=Genbank:WP_027704105.1;Name=WP_027704105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472553.1;locus_tag=LNP58_RS13485;product=TPM domain-containing protein;protein_id=WP_027704105.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2850651 2851142 . + . ID=gene-LNP58_RS13490;Name=LNP58_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13490;old_locus_tag=LNP58_13470 NZ_CP086372.1 Protein Homology CDS 2850651 2851142 . + 0 ID=cds-WP_011260174.1;Parent=gene-LNP58_RS13490;Dbxref=Genbank:WP_011260174.1;Name=WP_011260174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972126.1;locus_tag=LNP58_RS13490;product=TPM domain-containing protein;protein_id=WP_011260174.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2851197 2852087 . + . ID=gene-LNP58_RS13495;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LNP58_RS13495;old_locus_tag=LNP58_13475 NZ_CP086372.1 Protein Homology CDS 2851197 2852087 . + 0 ID=cds-WP_011260173.1;Parent=gene-LNP58_RS13495;Dbxref=Genbank:WP_011260173.1;Name=WP_011260173.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945080.1;locus_tag=LNP58_RS13495;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_011260173.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2852084 2852878 . + . ID=gene-LNP58_RS13500;Name=LNP58_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13500;old_locus_tag=LNP58_13480 NZ_CP086372.1 Protein Homology CDS 2852084 2852878 . + 0 ID=cds-WP_011260172.1;Parent=gene-LNP58_RS13500;Dbxref=Genbank:WP_011260172.1;Name=WP_011260172.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260172.1;locus_tag=LNP58_RS13500;product=thymidylate synthase;protein_id=WP_011260172.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2852945 2853232 . + . ID=gene-LNP58_RS13505;Name=LNP58_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13505;old_locus_tag=LNP58_13485 NZ_CP086372.1 Protein Homology CDS 2852945 2853232 . + 0 ID=cds-WP_027704106.1;Parent=gene-LNP58_RS13505;Dbxref=Genbank:WP_027704106.1;Name=WP_027704106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303563.1;locus_tag=LNP58_RS13505;product=hypothetical protein;protein_id=WP_027704106.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2853229 2853723 . + . ID=gene-LNP58_RS13510;Name=LNP58_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13510;old_locus_tag=LNP58_13490 NZ_CP086372.1 Protein Homology CDS 2853229 2853723 . + 0 ID=cds-WP_011260171.1;Parent=gene-LNP58_RS13510;Dbxref=Genbank:WP_011260171.1;Name=WP_011260171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157316.1;locus_tag=LNP58_RS13510;product=dihydrofolate reductase;protein_id=WP_011260171.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2853777 2854733 . - . ID=gene-LNP58_RS13515;Name=LNP58_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13515;old_locus_tag=LNP58_13495 NZ_CP086372.1 Protein Homology CDS 2853777 2854733 . - 0 ID=cds-WP_011260170.1;Parent=gene-LNP58_RS13515;Dbxref=Genbank:WP_011260170.1;Name=WP_011260170.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444234.1;locus_tag=LNP58_RS13515;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_011260170.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2854762 2855145 . - . ID=gene-LNP58_RS13520;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LNP58_RS13520;old_locus_tag=LNP58_13500 NZ_CP086372.1 Protein Homology CDS 2854762 2855145 . - 0 ID=cds-WP_011260169.1;Parent=gene-LNP58_RS13520;Dbxref=Genbank:WP_011260169.1;Name=WP_011260169.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451488.1;locus_tag=LNP58_RS13520;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011260169.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2855182 2855970 . - . ID=gene-LNP58_RS13525;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LNP58_RS13525;old_locus_tag=LNP58_13505 NZ_CP086372.1 Protein Homology CDS 2855182 2855970 . - 0 ID=cds-WP_011260168.1;Parent=gene-LNP58_RS13525;Dbxref=Genbank:WP_011260168.1;Name=WP_011260168.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260168.1;locus_tag=LNP58_RS13525;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011260168.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2856028 2856103 . - . ID=gene-LNP58_RS13530;Name=LNP58_RS13530;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13530;old_locus_tag=LNP58_13510 NZ_CP086372.1 cmsearch ncRNA 2856028 2856103 . - . ID=rna-LNP58_RS13530;Parent=gene-LNP58_RS13530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13530;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2856028 2856103 . - . ID=exon-LNP58_RS13530-1;Parent=rna-LNP58_RS13530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13530;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2856227 2857198 . - . ID=gene-LNP58_RS13535;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LNP58_RS13535;old_locus_tag=LNP58_13515 NZ_CP086372.1 Protein Homology CDS 2856227 2857198 . - 0 ID=cds-WP_011260167.1;Parent=gene-LNP58_RS13535;Dbxref=Genbank:WP_011260167.1;Name=WP_011260167.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157313.1;locus_tag=LNP58_RS13535;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_011260167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2857219 2858610 . - . ID=gene-LNP58_RS13540;Name=LNP58_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13540;old_locus_tag=LNP58_13520 NZ_CP086372.1 Protein Homology CDS 2857219 2858610 . - 0 ID=cds-WP_011260166.1;Parent=gene-LNP58_RS13540;Dbxref=Genbank:WP_011260166.1;Name=WP_011260166.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157312.1;locus_tag=LNP58_RS13540;product=peptidylprolyl isomerase;protein_id=WP_011260166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2858607 2861048 . - . ID=gene-LNP58_RS13545;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LNP58_RS13545;old_locus_tag=LNP58_13525 NZ_CP086372.1 Protein Homology CDS 2858607 2861048 . - 0 ID=cds-WP_011409337.1;Parent=gene-LNP58_RS13545;Dbxref=Genbank:WP_011409337.1;Name=WP_011409337.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036030.1;locus_tag=LNP58_RS13545;product=LPS-assembly protein LptD;protein_id=WP_011409337.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2861176 2862084 . - . ID=gene-LNP58_RS13550;Name=LNP58_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13550;old_locus_tag=LNP58_13530 NZ_CP086372.1 Protein Homology CDS 2861176 2862084 . - 0 ID=cds-WP_027704107.1;Parent=gene-LNP58_RS13550;Dbxref=Genbank:WP_027704107.1;Name=WP_027704107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900762.1;locus_tag=LNP58_RS13550;product=histone deacetylase family protein;protein_id=WP_027704107.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2862122 2862679 . - . ID=gene-LNP58_RS13555;Name=LNP58_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13555;old_locus_tag=LNP58_13535 NZ_CP086372.1 Protein Homology CDS 2862122 2862679 . - 0 ID=cds-WP_011260163.1;Parent=gene-LNP58_RS13555;Dbxref=Genbank:WP_011260163.1;Name=WP_011260163.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502064.1;locus_tag=LNP58_RS13555;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011260163.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2862683 2863261 . - . ID=gene-LNP58_RS13560;Name=LNP58_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13560;old_locus_tag=LNP58_13540 NZ_CP086372.1 Protein Homology CDS 2862683 2863261 . - 0 ID=cds-WP_011409335.1;Parent=gene-LNP58_RS13560;Dbxref=Genbank:WP_011409335.1;Name=WP_011409335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159102.1;locus_tag=LNP58_RS13560;product=hypothetical protein;protein_id=WP_011409335.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2863560 2864768 . + . ID=gene-LNP58_RS13565;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LNP58_RS13565;old_locus_tag=LNP58_13545 NZ_CP086372.1 Protein Homology CDS 2863560 2864768 . + 0 ID=cds-WP_011409334.1;Parent=gene-LNP58_RS13565;Dbxref=Genbank:WP_011409334.1;Name=WP_011409334.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171680.1;locus_tag=LNP58_RS13565;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_011409334.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2864765 2865946 . + . ID=gene-LNP58_RS13570;Name=LNP58_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13570;old_locus_tag=LNP58_13550 NZ_CP086372.1 Protein Homology CDS 2864765 2865946 . + 0 ID=cds-WP_011409333.1;Parent=gene-LNP58_RS13570;Dbxref=Genbank:WP_011409333.1;Name=WP_011409333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157306.1;locus_tag=LNP58_RS13570;product=UbiH/UbiF family hydroxylase;protein_id=WP_011409333.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2866074 2866797 . + . ID=gene-LNP58_RS13575;Name=LNP58_RS13575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13575;old_locus_tag=LNP58_13555;pseudo=true NZ_CP086372.1 Protein Homology CDS 2866074 2866797 . + 0 ID=cds-LNP58_RS13575;Parent=gene-LNP58_RS13575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089440.1;locus_tag=LNP58_RS13575;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2866914 2867435 . + . ID=gene-LNP58_RS13580;Name=LNP58_RS13580;end_range=2867435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13580;old_locus_tag=LNP58_13560;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2866914 2867435 . + 0 ID=cds-LNP58_RS13580;Parent=gene-LNP58_RS13580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2867435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445209.1;locus_tag=LNP58_RS13580;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2867523 2868488 . + . ID=gene-LNP58_RS13585;Name=LNP58_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13585;old_locus_tag=LNP58_13565 NZ_CP086372.1 Protein Homology CDS 2867523 2868488 . + 0 ID=cds-WP_109182027.1-3;Parent=gene-LNP58_RS13585;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS13585;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2868493 2868876 . + . ID=gene-LNP58_RS13590;Name=LNP58_RS13590;end_range=2868876,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13590;old_locus_tag=LNP58_13570;partial=true;pseudo=true;start_range=.,2868493 NZ_CP086372.1 Protein Homology CDS 2868493 2868876 . + 0 ID=cds-LNP58_RS13590;Parent=gene-LNP58_RS13590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=2868876,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260016.1;locus_tag=LNP58_RS13590;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2868493;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2868873 2869335 . - . ID=gene-LNP58_RS13595;Name=LNP58_RS13595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13595;old_locus_tag=LNP58_13575;partial=true;pseudo=true;start_range=.,2868873 NZ_CP086372.1 Protein Homology CDS 2868873 2869335 . - 0 ID=cds-LNP58_RS13595;Parent=gene-LNP58_RS13595;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157302.1;locus_tag=LNP58_RS13595;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,2868873;transl_table=11 NZ_CP086372.1 RefSeq gene 2869572 2870468 . + . ID=gene-LNP58_RS13600;Name=LNP58_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13600;old_locus_tag=LNP58_13580 NZ_CP086372.1 Protein Homology CDS 2869572 2870468 . + 0 ID=cds-WP_011260154.1;Parent=gene-LNP58_RS13600;Dbxref=Genbank:WP_011260154.1;Name=WP_011260154.1;Ontology_term=GO:0006725,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157301.1;locus_tag=LNP58_RS13600;product=gallate dioxygenase;protein_id=WP_011260154.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2870479 2870839 . + . ID=gene-LNP58_RS13605;Name=LNP58_RS13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13605;old_locus_tag=LNP58_13585;pseudo=true NZ_CP086372.1 Protein Homology CDS 2870479 2870839 . + 0 ID=cds-LNP58_RS13605;Parent=gene-LNP58_RS13605;Note=extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols%3B part of the bacterial aromatic compound degradation pathway%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157300.1;locus_tag=LNP58_RS13605;product=protocatechuate 3%2C4-dioxygenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2870905 2871906 . + . ID=gene-LNP58_RS13610;Name=LNP58_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13610;old_locus_tag=LNP58_13590 NZ_CP086372.1 Protein Homology CDS 2870905 2871906 . + 0 ID=cds-WP_011409327.1;Parent=gene-LNP58_RS13610;Dbxref=Genbank:WP_011409327.1;Name=WP_011409327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970087.1;locus_tag=LNP58_RS13610;product=LysR substrate-binding domain-containing protein;protein_id=WP_011409327.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2872091 2873569 . - . ID=gene-LNP58_RS13615;Name=LNP58_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13615;old_locus_tag=LNP58_13595 NZ_CP086372.1 Protein Homology CDS 2872091 2873569 . - 0 ID=cds-WP_011409326.1;Parent=gene-LNP58_RS13615;Dbxref=Genbank:WP_011409326.1;Name=WP_011409326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367439.1;locus_tag=LNP58_RS13615;product=AMP-binding protein;protein_id=WP_011409326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2873772 2875241 . - . ID=gene-LNP58_RS13620;Name=LNP58_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13620;old_locus_tag=LNP58_13600 NZ_CP086372.1 Protein Homology CDS 2873772 2875241 . - 0 ID=cds-WP_011409325.1;Parent=gene-LNP58_RS13620;Dbxref=Genbank:WP_011409325.1;Name=WP_011409325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014077148.1;locus_tag=LNP58_RS13620;product=aldehyde dehydrogenase;protein_id=WP_011409325.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2875325 2876152 . - . ID=gene-LNP58_RS13625;Name=LNP58_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13625;old_locus_tag=LNP58_13605 NZ_CP086372.1 Protein Homology CDS 2875325 2876152 . - 0 ID=cds-WP_011409324.1;Parent=gene-LNP58_RS13625;Dbxref=Genbank:WP_011409324.1;Name=WP_011409324.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572593.1;locus_tag=LNP58_RS13625;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_011409324.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2876198 2876671 . - . ID=gene-LNP58_RS13630;Name=LNP58_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13630;old_locus_tag=LNP58_13610 NZ_CP086372.1 Protein Homology CDS 2876198 2876671 . - 0 ID=cds-WP_011260149.1;Parent=gene-LNP58_RS13630;Dbxref=Genbank:WP_011260149.1;Name=WP_011260149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157297.1;locus_tag=LNP58_RS13630;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011260149.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2876799 2877206 . - . ID=gene-LNP58_RS13635;Name=LNP58_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13635;old_locus_tag=LNP58_13615 NZ_CP086372.1 Protein Homology CDS 2876799 2877206 . - 0 ID=cds-WP_011409323.1;Parent=gene-LNP58_RS13635;Dbxref=Genbank:WP_011409323.1;Name=WP_011409323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157296.1;locus_tag=LNP58_RS13635;product=hypothetical protein;protein_id=WP_011409323.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2877406 2878128 . - . ID=gene-LNP58_RS13640;Name=LNP58_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13640;old_locus_tag=LNP58_13620 NZ_CP086372.1 Protein Homology CDS 2877406 2878128 . - 0 ID=cds-WP_027703838.1;Parent=gene-LNP58_RS13640;Dbxref=Genbank:WP_027703838.1;Name=WP_027703838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449576.1;locus_tag=LNP58_RS13640;product=hypothetical protein;protein_id=WP_027703838.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2878211 2879116 . - . ID=gene-LNP58_RS13645;Name=LNP58_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13645;old_locus_tag=LNP58_13625 NZ_CP086372.1 Protein Homology CDS 2878211 2879116 . - 0 ID=cds-WP_011409321.1;Parent=gene-LNP58_RS13645;Dbxref=Genbank:WP_011409321.1;Name=WP_011409321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157294.1;locus_tag=LNP58_RS13645;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_011409321.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2879311 2880420 . + . ID=gene-LNP58_RS13650;Name=LNP58_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13650;old_locus_tag=LNP58_13630 NZ_CP086372.1 Protein Homology CDS 2879311 2880420 . + 0 ID=cds-WP_012444247.1;Parent=gene-LNP58_RS13650;Dbxref=Genbank:WP_012444247.1;Name=WP_012444247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300569.1;locus_tag=LNP58_RS13650;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_012444247.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2880742 2881785 . - . ID=gene-LNP58_RS13655;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=LNP58_RS13655;old_locus_tag=LNP58_13635 NZ_CP086372.1 Protein Homology CDS 2880742 2881785 . - 0 ID=cds-WP_011409319.1;Parent=gene-LNP58_RS13655;Dbxref=Genbank:WP_011409319.1;Name=WP_011409319.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260144.1;locus_tag=LNP58_RS13655;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_011409319.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2881822 2882382 . - . ID=gene-LNP58_RS13660;Name=LNP58_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13660;old_locus_tag=LNP58_13640 NZ_CP086372.1 Protein Homology CDS 2881822 2882382 . - 0 ID=cds-WP_011409318.1;Parent=gene-LNP58_RS13660;Dbxref=Genbank:WP_011409318.1;Name=WP_011409318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572602.1;locus_tag=LNP58_RS13660;product=nucleoside deaminase;protein_id=WP_011409318.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2882382 2882792 . - . ID=gene-LNP58_RS13665;Name=LNP58_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13665;old_locus_tag=LNP58_13645 NZ_CP086372.1 Protein Homology CDS 2882382 2882792 . - 0 ID=cds-WP_011409317.1;Parent=gene-LNP58_RS13665;Dbxref=Genbank:WP_011409317.1;Name=WP_011409317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112744.1;locus_tag=LNP58_RS13665;product=hypothetical protein;protein_id=WP_011409317.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2883029 2883111 . + . ID=gene-LNP58_RS13670;Name=LNP58_RS13670;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13670;old_locus_tag=LNP58_13650 NZ_CP086372.1 cmsearch ncRNA 2883029 2883111 . + . ID=rna-LNP58_RS13670;Parent=gene-LNP58_RS13670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13670;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2883029 2883111 . + . ID=exon-LNP58_RS13670-1;Parent=rna-LNP58_RS13670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13670;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2883476 2884319 . - . ID=gene-LNP58_RS13675;Name=LNP58_RS13675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13675;old_locus_tag=LNP58_13655;partial=true;pseudo=true;start_range=.,2883476 NZ_CP086372.1 Protein Homology CDS 2883476 2884319 . - 0 ID=cds-LNP58_RS13675;Parent=gene-LNP58_RS13675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965281.1;locus_tag=LNP58_RS13675;partial=true;product=DMT family transporter;pseudo=true;start_range=.,2883476;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2884372 2885171 . + . ID=gene-LNP58_RS13680;Name=LNP58_RS13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13680;old_locus_tag=LNP58_13660;pseudo=true NZ_CP086372.1 Protein Homology CDS 2884372 2885171 . + 0 ID=cds-LNP58_RS13680;Parent=gene-LNP58_RS13680;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS13680;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2885182 2885277 . - . ID=gene-LNP58_RS13685;Name=LNP58_RS13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13685;old_locus_tag=LNP58_13665;partial=true;pseudo=true;start_range=.,2885182 NZ_CP086372.1 Protein Homology CDS 2885182 2885277 . - 0 ID=cds-LNP58_RS13685;Parent=gene-LNP58_RS13685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340020.1;locus_tag=LNP58_RS13685;partial=true;product=EamA/RhaT family transporter;pseudo=true;start_range=.,2885182;transl_table=11 NZ_CP086372.1 RefSeq gene 2885379 2885540 . + . ID=gene-LNP58_RS13690;Name=LNP58_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13690;old_locus_tag=LNP58_13670 NZ_CP086372.1 Protein Homology CDS 2885379 2885540 . + 0 ID=cds-WP_115844438.1;Parent=gene-LNP58_RS13690;Dbxref=Genbank:WP_115844438.1;Name=WP_115844438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=LNP58_RS13690;product=helix-turn-helix domain-containing protein;protein_id=WP_115844438.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2885745 2886508 . + . ID=gene-LNP58_RS13695;Name=LNP58_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13695;old_locus_tag=LNP58_13675 NZ_CP086372.1 Protein Homology CDS 2885745 2886060 . + 0 ID=cds-WP_094187736.1-2;Parent=gene-LNP58_RS13695;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS13695;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2886060 2886508 . + 2 ID=cds-WP_094187736.1-2;Parent=gene-LNP58_RS13695;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS13695;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2886517 2887170 . + . ID=gene-LNP58_RS13700;Name=LNP58_RS13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13700;old_locus_tag=LNP58_13680;partial=true;pseudo=true;start_range=.,2886517 NZ_CP086372.1 Protein Homology CDS 2886517 2887170 . + 0 ID=cds-LNP58_RS13700;Parent=gene-LNP58_RS13700;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS13700;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,2886517;transl_table=11 NZ_CP086372.1 RefSeq gene 2887220 2887405 . - . ID=gene-LNP58_RS13705;Name=LNP58_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13705;old_locus_tag=LNP58_13685 NZ_CP086372.1 Protein Homology CDS 2887220 2887405 . - 0 ID=cds-WP_059317428.1;Parent=gene-LNP58_RS13705;Dbxref=Genbank:WP_059317428.1;Name=WP_059317428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502089.1;locus_tag=LNP58_RS13705;product=hypothetical protein;protein_id=WP_059317428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2887598 2889337 . - . ID=gene-LNP58_RS13710;Name=LNP58_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13710;old_locus_tag=LNP58_13690 NZ_CP086372.1 Protein Homology CDS 2887598 2889337 . - 0 ID=cds-WP_011260138.1;Parent=gene-LNP58_RS13710;Dbxref=Genbank:WP_011260138.1;Name=WP_011260138.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449568.1;locus_tag=LNP58_RS13710;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_011260138.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2889742 2890383 . + . ID=gene-LNP58_RS13715;Name=LNP58_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13715;old_locus_tag=LNP58_13695 NZ_CP086372.1 Protein Homology CDS 2889742 2890383 . + 0 ID=cds-WP_011260137.1;Parent=gene-LNP58_RS13715;Dbxref=Genbank:WP_011260137.1;Name=WP_011260137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381590.1;locus_tag=LNP58_RS13715;product=glutathione S-transferase family protein;protein_id=WP_011260137.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2890385 2890621 . + . ID=gene-LNP58_RS13720;Name=LNP58_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13720;old_locus_tag=LNP58_13700 NZ_CP086372.1 Protein Homology CDS 2890385 2890621 . + 0 ID=cds-WP_012444257.1;Parent=gene-LNP58_RS13720;Dbxref=Genbank:WP_012444257.1;Name=WP_012444257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444257.1;locus_tag=LNP58_RS13720;product=DUF2007 domain-containing protein;protein_id=WP_012444257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2890736 2891200 . - . ID=gene-LNP58_RS13725;Name=LNP58_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13725;old_locus_tag=LNP58_13705 NZ_CP086372.1 Protein Homology CDS 2890736 2891200 . - 0 ID=cds-WP_011409313.1;Parent=gene-LNP58_RS13725;Dbxref=Genbank:WP_011409313.1;Name=WP_011409313.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367413.1;locus_tag=LNP58_RS13725;product=response regulator;protein_id=WP_011409313.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2891197 2892114 . - . ID=gene-LNP58_RS13730;Name=LNP58_RS13730;end_range=2892114,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13730;old_locus_tag=LNP58_13710;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2891197 2892114 . - 0 ID=cds-LNP58_RS13730;Parent=gene-LNP58_RS13730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2892114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900734.1;locus_tag=LNP58_RS13730;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2892024 2892500 . - . ID=gene-LNP58_RS13735;Name=LNP58_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13735;old_locus_tag=LNP58_13715 NZ_CP086372.1 GeneMarkS-2+ CDS 2892024 2892500 . - 0 ID=cds-WP_011257704.1;Parent=gene-LNP58_RS13735;Dbxref=Genbank:WP_011257704.1;Name=WP_011257704.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13735;product=IS5 family transposase;protein_id=WP_011257704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2892466 2892822 . - . ID=gene-LNP58_RS13740;Name=LNP58_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13740;old_locus_tag=LNP58_13720 NZ_CP086372.1 GeneMarkS-2+ CDS 2892466 2892822 . - 0 ID=cds-WP_011407260.1;Parent=gene-LNP58_RS13740;Dbxref=Genbank:WP_011407260.1;Name=WP_011407260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13740;product=IS5 family transposase;protein_id=WP_011407260.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2892866 2893336 . + . ID=gene-LNP58_RS13745;Name=LNP58_RS13745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13745;old_locus_tag=LNP58_13725;partial=true;pseudo=true;start_range=.,2892866 NZ_CP086372.1 Protein Homology CDS 2892866 2893336 . + 0 ID=cds-LNP58_RS13745;Parent=gene-LNP58_RS13745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=LNP58_RS13745;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,2892866;transl_table=11 NZ_CP086372.1 RefSeq gene 2893275 2893601 . - . ID=gene-LNP58_RS13750;Name=LNP58_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13750;old_locus_tag=LNP58_13730 NZ_CP086372.1 GeneMarkS-2+ CDS 2893275 2893601 . - 0 ID=cds-WP_075240877.1;Parent=gene-LNP58_RS13750;Dbxref=Genbank:WP_075240877.1;Name=WP_075240877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS13750;product=hypothetical protein;protein_id=WP_075240877.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2893564 2894205 . - . ID=gene-LNP58_RS13755;Name=LNP58_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13755;old_locus_tag=LNP58_13735 NZ_CP086372.1 Protein Homology CDS 2893564 2894205 . - 0 ID=cds-WP_011409312.1;Parent=gene-LNP58_RS13755;Dbxref=Genbank:WP_011409312.1;Name=WP_011409312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300708.1;locus_tag=LNP58_RS13755;product=hypothetical protein;protein_id=WP_011409312.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2894268 2894774 . - . ID=gene-LNP58_RS13760;Name=LNP58_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13760;old_locus_tag=LNP58_13740 NZ_CP086372.1 Protein Homology CDS 2894268 2894774 . - 0 ID=cds-WP_011409311.1;Parent=gene-LNP58_RS13760;Dbxref=Genbank:WP_011409311.1;Name=WP_011409311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=LNP58_RS13760;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_011409311.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2894825 2895867 . - . ID=gene-LNP58_RS13765;Name=LNP58_RS13765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13765;old_locus_tag=LNP58_13745;pseudo=true NZ_CP086372.1 Protein Homology CDS 2894825 2895867 . - 0 ID=cds-LNP58_RS13765;Parent=gene-LNP58_RS13765;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS13765;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2895976 2897283 . - . ID=gene-LNP58_RS13770;Name=LNP58_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13770;old_locus_tag=LNP58_13750 NZ_CP086372.1 Protein Homology CDS 2895976 2897283 . - 0 ID=cds-WP_041182257.1;Parent=gene-LNP58_RS13770;Dbxref=Genbank:WP_041182257.1;Name=WP_041182257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260131.1;locus_tag=LNP58_RS13770;product=MFS transporter;protein_id=WP_041182257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2897445 2899484 . - . ID=gene-LNP58_RS13775;Name=LNP58_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13775;old_locus_tag=LNP58_13755 NZ_CP086372.1 Protein Homology CDS 2897445 2899484 . - 0 ID=cds-WP_011260130.1;Parent=gene-LNP58_RS13775;Dbxref=Genbank:WP_011260130.1;Name=WP_011260130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300705.1;locus_tag=LNP58_RS13775;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_011260130.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2899692 2900714 . - . ID=gene-LNP58_RS13780;Name=LNP58_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13780;old_locus_tag=LNP58_13760 NZ_CP086372.1 Protein Homology CDS 2899692 2900714 . - 0 ID=cds-WP_011260129.1;Parent=gene-LNP58_RS13780;Dbxref=Genbank:WP_011260129.1;Name=WP_011260129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998400.1;locus_tag=LNP58_RS13780;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_011260129.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2901130 2902227 . + . ID=gene-LNP58_RS13785;Name=LNP58_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13785;old_locus_tag=LNP58_13765 NZ_CP086372.1 Protein Homology CDS 2901130 2902227 . + 0 ID=cds-WP_011409308.1;Parent=gene-LNP58_RS13785;Dbxref=Genbank:WP_011409308.1;Name=WP_011409308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1;locus_tag=LNP58_RS13785;product=OmpA family protein;protein_id=WP_011409308.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2902420 2902929 . + . ID=gene-LNP58_RS13790;Name=LNP58_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13790;old_locus_tag=LNP58_13770 NZ_CP086372.1 Protein Homology CDS 2902420 2902929 . + 0 ID=cds-WP_011260127.1;Parent=gene-LNP58_RS13790;Dbxref=Genbank:WP_011260127.1;Name=WP_011260127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156231.1;locus_tag=LNP58_RS13790;product=hypothetical protein;protein_id=WP_011260127.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2902949 2903809 . + . ID=gene-LNP58_RS13795;Name=LNP58_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13795;old_locus_tag=LNP58_13775 NZ_CP086372.1 Protein Homology CDS 2902949 2903809 . + 0 ID=cds-WP_011260126.1;Parent=gene-LNP58_RS13795;Dbxref=Genbank:WP_011260126.1;Name=WP_011260126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156232.1;locus_tag=LNP58_RS13795;product=pseudouridine synthase;protein_id=WP_011260126.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2903760 2904152 . - . ID=gene-LNP58_RS13800;Name=LNP58_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13800;old_locus_tag=LNP58_13780 NZ_CP086372.1 Protein Homology CDS 2903760 2904152 . - 0 ID=cds-WP_011409307.1;Parent=gene-LNP58_RS13800;Dbxref=Genbank:WP_011409307.1;Name=WP_011409307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156233.1;locus_tag=LNP58_RS13800;product=hypothetical protein;protein_id=WP_011409307.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2904155 2905363 . - . ID=gene-LNP58_RS13805;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=LNP58_RS13805;old_locus_tag=LNP58_13785 NZ_CP086372.1 Protein Homology CDS 2904155 2905363 . - 0 ID=cds-WP_011260125.1;Parent=gene-LNP58_RS13805;Dbxref=Genbank:WP_011260125.1;Name=WP_011260125.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156234.1;locus_tag=LNP58_RS13805;product=glycine C-acetyltransferase;protein_id=WP_011260125.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2905454 2906551 . + . ID=gene-LNP58_RS13810;Name=LNP58_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13810;old_locus_tag=LNP58_13790 NZ_CP086372.1 Protein Homology CDS 2905454 2906551 . + 0 ID=cds-WP_011260124.1;Parent=gene-LNP58_RS13810;Dbxref=Genbank:WP_011260124.1;Name=WP_011260124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=LNP58_RS13810;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_011260124.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2906555 2907415 . + . ID=gene-LNP58_RS13815;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LNP58_RS13815;old_locus_tag=LNP58_13795 NZ_CP086372.1 Protein Homology CDS 2906555 2907415 . + 0 ID=cds-WP_011260123.1;Parent=gene-LNP58_RS13815;Dbxref=Genbank:WP_011260123.1;Name=WP_011260123.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036155.1;locus_tag=LNP58_RS13815;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_011260123.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2907412 2908365 . + . ID=gene-LNP58_RS13820;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LNP58_RS13820;old_locus_tag=LNP58_13800 NZ_CP086372.1 Protein Homology CDS 2907412 2908365 . + 0 ID=cds-WP_011260122.1;Parent=gene-LNP58_RS13820;Dbxref=Genbank:WP_011260122.1;Name=WP_011260122.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158531.1;locus_tag=LNP58_RS13820;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_011260122.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2908373 2909407 . + . ID=gene-LNP58_RS13825;Name=LNP58_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13825;old_locus_tag=LNP58_13805 NZ_CP086372.1 Protein Homology CDS 2908373 2909407 . + 0 ID=cds-WP_027703808.1;Parent=gene-LNP58_RS13825;Dbxref=Genbank:WP_027703808.1;Name=WP_027703808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305108.1;locus_tag=LNP58_RS13825;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_027703808.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2909761 2910474 . + . ID=gene-LNP58_RS13830;Name=LNP58_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13830;old_locus_tag=LNP58_13810 NZ_CP086372.1 Protein Homology CDS 2909761 2910474 . + 0 ID=cds-WP_011409306.1;Parent=gene-LNP58_RS13830;Dbxref=Genbank:WP_011409306.1;Name=WP_011409306.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159554.1;locus_tag=LNP58_RS13830;product=TorF family putative porin;protein_id=WP_011409306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2910544 2911578 . - . ID=gene-LNP58_RS13835;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LNP58_RS13835;old_locus_tag=LNP58_13815 NZ_CP086372.1 Protein Homology CDS 2910544 2911578 . - 0 ID=cds-WP_011260119.1;Parent=gene-LNP58_RS13835;Dbxref=Genbank:WP_011260119.1;Name=WP_011260119.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164734.1;locus_tag=LNP58_RS13835;product=L-threonine 3-dehydrogenase;protein_id=WP_011260119.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2912081 2914414 . - . ID=gene-LNP58_RS13840;Name=LNP58_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13840;old_locus_tag=LNP58_13820 NZ_CP086372.1 Protein Homology CDS 2912081 2914414 . - 0 ID=cds-WP_075242295.1;Parent=gene-LNP58_RS13840;Dbxref=Genbank:WP_075242295.1;Name=WP_075242295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571636.1;locus_tag=LNP58_RS13840;product=TonB-dependent receptor;protein_id=WP_075242295.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2914470 2916459 . + . ID=gene-LNP58_RS13845;Name=LNP58_RS13845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13845;old_locus_tag=LNP58_13825;partial=true;pseudo=true;start_range=.,2914470 NZ_CP086372.1 Protein Homology CDS 2914470 2916459 . + 0 ID=cds-LNP58_RS13845;Parent=gene-LNP58_RS13845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115285.1;locus_tag=LNP58_RS13845;partial=true;product=phospholipase C%2C phosphocholine-specific;pseudo=true;start_range=.,2914470;transl_table=11 NZ_CP086372.1 RefSeq gene 2916701 2918776 . + . ID=gene-LNP58_RS13850;Name=LNP58_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13850;old_locus_tag=LNP58_13830 NZ_CP086372.1 Protein Homology CDS 2916701 2918776 . + 0 ID=cds-WP_027703644.1;Parent=gene-LNP58_RS13850;Dbxref=Genbank:WP_027703644.1;Name=WP_027703644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156243.1;locus_tag=LNP58_RS13850;product=S46 family peptidase;protein_id=WP_027703644.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2918868 2919512 . + . ID=gene-LNP58_RS13855;Name=LNP58_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13855;old_locus_tag=LNP58_13835 NZ_CP086372.1 Protein Homology CDS 2918868 2919512 . + 0 ID=cds-WP_011409301.1;Parent=gene-LNP58_RS13855;Dbxref=Genbank:WP_011409301.1;Name=WP_011409301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=LNP58_RS13855;product=histidine phosphatase family protein;protein_id=WP_011409301.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2920226 2920302 . - . ID=gene-LNP58_RS13860;Name=LNP58_RS13860;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13860;old_locus_tag=LNP58_13840 NZ_CP086372.1 cmsearch ncRNA 2920226 2920302 . - . ID=rna-LNP58_RS13860;Parent=gene-LNP58_RS13860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13860;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2920226 2920302 . - . ID=exon-LNP58_RS13860-1;Parent=rna-LNP58_RS13860;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13860;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2920485 2921783 . + . ID=gene-LNP58_RS13865;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LNP58_RS13865;old_locus_tag=LNP58_13845 NZ_CP086372.1 Protein Homology CDS 2920485 2921783 . + 0 ID=cds-WP_011409300.1;Parent=gene-LNP58_RS13865;Dbxref=Genbank:WP_011409300.1;Name=WP_011409300.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409300.1;locus_tag=LNP58_RS13865;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_011409300.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2921851 2922933 . + . ID=gene-LNP58_RS13870;Name=LNP58_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13870;old_locus_tag=LNP58_13850 NZ_CP086372.1 Protein Homology CDS 2921851 2922933 . + 0 ID=cds-WP_011260113.1;Parent=gene-LNP58_RS13870;Dbxref=Genbank:WP_011260113.1;Name=WP_011260113.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=LNP58_RS13870;product=SPOR domain-containing protein;protein_id=WP_011260113.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2923148 2923894 . + . ID=gene-LNP58_RS13875;Name=LNP58_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13875;old_locus_tag=LNP58_13855 NZ_CP086372.1 Protein Homology CDS 2923148 2923894 . + 0 ID=cds-WP_011409299.1;Parent=gene-LNP58_RS13875;Dbxref=Genbank:WP_011409299.1;Name=WP_011409299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301875.1;locus_tag=LNP58_RS13875;product=CvpA family protein;protein_id=WP_011409299.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2923925 2925391 . + . ID=gene-LNP58_RS13880;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LNP58_RS13880;old_locus_tag=LNP58_13860 NZ_CP086372.1 Protein Homology CDS 2923925 2925391 . + 0 ID=cds-WP_011409298.1;Parent=gene-LNP58_RS13880;Dbxref=Genbank:WP_011409298.1;Name=WP_011409298.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806604.1;locus_tag=LNP58_RS13880;product=amidophosphoribosyltransferase;protein_id=WP_011409298.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2925530 2926354 . + . ID=gene-LNP58_RS13885;Name=LNP58_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13885;old_locus_tag=LNP58_13865 NZ_CP086372.1 Protein Homology CDS 2925530 2926354 . + 0 ID=cds-WP_011409297.1;Parent=gene-LNP58_RS13885;Dbxref=Genbank:WP_011409297.1;Name=WP_011409297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115654.1;locus_tag=LNP58_RS13885;product=ferritin-like domain-containing protein;protein_id=WP_011409297.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2926389 2926466 . - . ID=gene-LNP58_RS13890;Name=LNP58_RS13890;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS13890;old_locus_tag=LNP58_13870 NZ_CP086372.1 cmsearch ncRNA 2926389 2926466 . - . ID=rna-LNP58_RS13890;Parent=gene-LNP58_RS13890;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13890;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2926389 2926466 . - . ID=exon-LNP58_RS13890-1;Parent=rna-LNP58_RS13890;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS13890;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 2927031 2927156 . + . ID=gene-LNP58_RS13895;Name=LNP58_RS13895;end_range=2927156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13895;old_locus_tag=LNP58_13875;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2927031 2927156 . + 0 ID=cds-LNP58_RS13895;Parent=gene-LNP58_RS13895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2927156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506851.1;locus_tag=LNP58_RS13895;partial=true;product=peptidyl-Asp metalloendopeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2927423 2927842 . + . ID=gene-LNP58_RS13900;Name=LNP58_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13900;old_locus_tag=LNP58_13880 NZ_CP086372.1 Protein Homology CDS 2927423 2927842 . + 0 ID=cds-WP_011260109.1;Parent=gene-LNP58_RS13900;Dbxref=Genbank:WP_011260109.1;Name=WP_011260109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368563.1;locus_tag=LNP58_RS13900;product=hypothetical protein;protein_id=WP_011260109.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2928022 2928765 . - . ID=gene-LNP58_RS13905;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LNP58_RS13905;old_locus_tag=LNP58_13885 NZ_CP086372.1 Protein Homology CDS 2928022 2928765 . - 0 ID=cds-WP_011260108.1;Parent=gene-LNP58_RS13905;Dbxref=Genbank:WP_011260108.1;Name=WP_011260108.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439087.1;locus_tag=LNP58_RS13905;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_011260108.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2929413 2929955 . - . ID=gene-LNP58_RS13910;Name=LNP58_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13910;old_locus_tag=LNP58_13890 NZ_CP086372.1 Protein Homology CDS 2929413 2929955 . - 0 ID=cds-WP_011409295.1;Parent=gene-LNP58_RS13910;Dbxref=Genbank:WP_011409295.1;Name=WP_011409295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409295.1;locus_tag=LNP58_RS13910;product=phosphatase PAP2 family protein;protein_id=WP_011409295.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2929936 2931072 . - . ID=gene-LNP58_RS13915;Name=LNP58_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13915;old_locus_tag=LNP58_13895 NZ_CP086372.1 Protein Homology CDS 2929936 2931072 . - 0 ID=cds-WP_075242294.1;Parent=gene-LNP58_RS13915;Dbxref=Genbank:WP_075242294.1;Name=WP_075242294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922250.1;locus_tag=LNP58_RS13915;product=glycosyltransferase family 1 protein;protein_id=WP_075242294.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2931277 2932797 . - . ID=gene-LNP58_RS13920;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LNP58_RS13920;old_locus_tag=LNP58_13900 NZ_CP086372.1 Protein Homology CDS 2931277 2932797 . - 0 ID=cds-WP_012445948.1;Parent=gene-LNP58_RS13920;Dbxref=Genbank:WP_012445948.1;Name=WP_012445948.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304895.1;locus_tag=LNP58_RS13920;product=exopolyphosphatase;protein_id=WP_012445948.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2932975 2935077 . - . ID=gene-LNP58_RS13925;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LNP58_RS13925;old_locus_tag=LNP58_13905 NZ_CP086372.1 Protein Homology CDS 2932975 2935077 . - 0 ID=cds-WP_011260104.1;Parent=gene-LNP58_RS13925;Dbxref=Genbank:WP_011260104.1;Name=WP_011260104.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483747.1;locus_tag=LNP58_RS13925;product=polyphosphate kinase 1;protein_id=WP_011260104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2935193 2936521 . - . ID=gene-LNP58_RS13930;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LNP58_RS13930;old_locus_tag=LNP58_13910 NZ_CP086372.1 Protein Homology CDS 2935193 2936521 . - 0 ID=cds-WP_012445946.1;Parent=gene-LNP58_RS13930;Dbxref=Genbank:WP_012445946.1;Name=WP_012445946.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158112.1;locus_tag=LNP58_RS13930;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_012445946.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2936594 2937283 . - . ID=gene-LNP58_RS13935;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LNP58_RS13935;old_locus_tag=LNP58_13915 NZ_CP086372.1 Protein Homology CDS 2936594 2937283 . - 0 ID=cds-WP_011260102.1;Parent=gene-LNP58_RS13935;Dbxref=Genbank:WP_011260102.1;Name=WP_011260102.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806631.1;locus_tag=LNP58_RS13935;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_011260102.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2937464 2939170 . - . ID=gene-LNP58_RS13940;Name=LNP58_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13940;old_locus_tag=LNP58_13920 NZ_CP086372.1 Protein Homology CDS 2937464 2939170 . - 0 ID=cds-WP_027703647.1;Parent=gene-LNP58_RS13940;Dbxref=Genbank:WP_027703647.1;Name=WP_027703647.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378377.1;locus_tag=LNP58_RS13940;product=M48 family metalloprotease;protein_id=WP_027703647.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2939260 2939568 . + . ID=gene-LNP58_RS13945;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LNP58_RS13945;old_locus_tag=LNP58_13925 NZ_CP086372.1 Protein Homology CDS 2939260 2939568 . + 0 ID=cds-WP_012445944.1;Parent=gene-LNP58_RS13945;Dbxref=Genbank:WP_012445944.1;Name=WP_012445944.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927845.1;locus_tag=LNP58_RS13945;product=glutaredoxin 3;protein_id=WP_012445944.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2939565 2939960 . + . ID=gene-LNP58_RS13950;Name=LNP58_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13950;old_locus_tag=LNP58_13930 NZ_CP086372.1 Protein Homology CDS 2939565 2939960 . + 0 ID=cds-WP_011260099.1;Parent=gene-LNP58_RS13950;Dbxref=Genbank:WP_011260099.1;Name=WP_011260099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483760.1;locus_tag=LNP58_RS13950;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011260099.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2940111 2940880 . + . ID=gene-LNP58_RS13955;Name=LNP58_RS13955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13955;old_locus_tag=LNP58_13935;pseudo=true NZ_CP086372.1 Protein Homology CDS 2940111 2940880 . + 0 ID=cds-LNP58_RS13955;Parent=gene-LNP58_RS13955;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS13955;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2940890 2941465 . + . ID=gene-LNP58_RS13960;Name=LNP58_RS13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13960;old_locus_tag=LNP58_13940;partial=true;pseudo=true;start_range=.,2940890 NZ_CP086372.1 Protein Homology CDS 2940890 2941465 . + 0 ID=cds-LNP58_RS13960;Parent=gene-LNP58_RS13960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS13960;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,2940890;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2941539 2942120 . - . ID=gene-LNP58_RS13965;Name=LNP58_RS13965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13965;old_locus_tag=LNP58_13945;partial=true;pseudo=true;start_range=.,2941539 NZ_CP086372.1 Protein Homology CDS 2941539 2942120 . - 0 ID=cds-LNP58_RS13965;Parent=gene-LNP58_RS13965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994157.1;locus_tag=LNP58_RS13965;partial=true;product=DNA-binding response regulator;pseudo=true;start_range=.,2941539;transl_table=11 NZ_CP086372.1 RefSeq gene 2942245 2942760 . + . ID=gene-LNP58_RS13970;Name=LNP58_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13970;old_locus_tag=LNP58_13950 NZ_CP086372.1 Protein Homology CDS 2942245 2942760 . + 0 ID=cds-WP_011409289.1;Parent=gene-LNP58_RS13970;Dbxref=Genbank:WP_011409289.1;Name=WP_011409289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160446.1;locus_tag=LNP58_RS13970;product=SgcJ/EcaC family oxidoreductase;protein_id=WP_011409289.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2942856 2943506 . + . ID=gene-LNP58_RS13975;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LNP58_RS13975;old_locus_tag=LNP58_13955 NZ_CP086372.1 Protein Homology CDS 2942856 2943506 . + 0 ID=cds-WP_069959982.1;Parent=gene-LNP58_RS13975;Dbxref=Genbank:WP_069959982.1;Name=WP_069959982.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089456.1;locus_tag=LNP58_RS13975;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_069959982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2943922 2944500 . - . ID=gene-LNP58_RS13980;Name=LNP58_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13980;old_locus_tag=LNP58_13960 NZ_CP086372.1 Protein Homology CDS 2943922 2944500 . - 0 ID=cds-WP_011260092.1;Parent=gene-LNP58_RS13980;Dbxref=Genbank:WP_011260092.1;Name=WP_011260092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156974.1;locus_tag=LNP58_RS13980;product=glutamine amidotransferase;protein_id=WP_011260092.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2944712 2945845 . - . ID=gene-LNP58_RS13985;Name=LNP58_RS13985;end_range=2945845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13985;old_locus_tag=LNP58_13965;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 2944712 2945845 . - 0 ID=cds-LNP58_RS13985;Parent=gene-LNP58_RS13985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2945845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS13985;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 2945934 2946899 . + . ID=gene-LNP58_RS13990;Name=LNP58_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS13990;old_locus_tag=LNP58_13970 NZ_CP086372.1 Protein Homology CDS 2945934 2946899 . + 0 ID=cds-WP_109181970.1;Parent=gene-LNP58_RS13990;Dbxref=Genbank:WP_109181970.1;Name=WP_109181970.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS13990;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181970.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2946906 2947097 . - . ID=gene-LNP58_RS13995;Name=LNP58_RS13995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS13995;old_locus_tag=LNP58_13975;partial=true;pseudo=true;start_range=.,2946906 NZ_CP086372.1 Protein Homology CDS 2946906 2947097 . - 0 ID=cds-LNP58_RS13995;Parent=gene-LNP58_RS13995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS13995;partial=true;product=transposase;pseudo=true;start_range=.,2946906;transl_table=11 NZ_CP086372.1 RefSeq gene 2947563 2948531 . - . ID=gene-LNP58_RS14000;Name=LNP58_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14000;old_locus_tag=LNP58_13980 NZ_CP086372.1 Protein Homology CDS 2947563 2948531 . - 0 ID=cds-WP_012444266.1;Parent=gene-LNP58_RS14000;Dbxref=Genbank:WP_012444266.1;Name=WP_012444266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089458.1;locus_tag=LNP58_RS14000;product=transaldolase;protein_id=WP_012444266.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2948594 2949025 . - . ID=gene-LNP58_RS14005;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=LNP58_RS14005;old_locus_tag=LNP58_13985 NZ_CP086372.1 Protein Homology CDS 2948594 2949025 . - 0 ID=cds-WP_011409284.1;Parent=gene-LNP58_RS14005;Dbxref=Genbank:WP_011409284.1;Name=WP_011409284.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381561.1;locus_tag=LNP58_RS14005;product=nucleoside diphosphate kinase regulator;protein_id=WP_011409284.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2949452 2950393 . - . ID=gene-LNP58_RS14010;Name=LNP58_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14010;old_locus_tag=LNP58_13990 NZ_CP086372.1 Protein Homology CDS 2949452 2950393 . - 0 ID=cds-WP_012444268.1;Parent=gene-LNP58_RS14010;Dbxref=Genbank:WP_012444268.1;Name=WP_012444268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811807.1;locus_tag=LNP58_RS14010;product=LysR substrate-binding domain-containing protein;protein_id=WP_012444268.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2950485 2952077 . - . ID=gene-LNP58_RS14015;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LNP58_RS14015;old_locus_tag=LNP58_13995 NZ_CP086372.1 Protein Homology CDS 2950485 2952077 . - 0 ID=cds-WP_011409282.1;Parent=gene-LNP58_RS14015;Dbxref=Genbank:WP_011409282.1;Name=WP_011409282.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488827.1;locus_tag=LNP58_RS14015;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_011409282.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2952268 2952831 . - . ID=gene-LNP58_RS14020;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LNP58_RS14020;old_locus_tag=LNP58_14000 NZ_CP086372.1 Protein Homology CDS 2952268 2952831 . - 0 ID=cds-WP_010381556.1;Parent=gene-LNP58_RS14020;Dbxref=Genbank:WP_010381556.1;Name=WP_010381556.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114658.1;locus_tag=LNP58_RS14020;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_010381556.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2953033 2953878 . + . ID=gene-LNP58_RS14025;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LNP58_RS14025;old_locus_tag=LNP58_14005 NZ_CP086372.1 Protein Homology CDS 2953033 2953878 . + 0 ID=cds-WP_011260084.1;Parent=gene-LNP58_RS14025;Dbxref=Genbank:WP_011260084.1;Name=WP_011260084.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304655.1;locus_tag=LNP58_RS14025;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_011260084.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2953937 2954893 . - . ID=gene-LNP58_RS14030;Name=LNP58_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14030;old_locus_tag=LNP58_14010 NZ_CP086372.1 Protein Homology CDS 2953937 2954893 . - 0 ID=cds-WP_042465726.1;Parent=gene-LNP58_RS14030;Dbxref=Genbank:WP_042465726.1;Name=WP_042465726.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS14030;product=IS30-like element IS1112b family transposase;protein_id=WP_042465726.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2954887 2955246 . + . ID=gene-LNP58_RS14035;Name=LNP58_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14035;old_locus_tag=LNP58_14015 NZ_CP086372.1 GeneMarkS-2+ CDS 2954887 2955246 . + 0 ID=cds-WP_075243232.1;Parent=gene-LNP58_RS14035;Dbxref=Genbank:WP_075243232.1;Name=WP_075243232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14035;product=hypothetical protein;protein_id=WP_075243232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2955291 2955572 . + . ID=gene-LNP58_RS14040;Name=LNP58_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14040;old_locus_tag=LNP58_14020 NZ_CP086372.1 GeneMarkS-2+ CDS 2955291 2955572 . + 0 ID=cds-WP_228383567.1;Parent=gene-LNP58_RS14040;Dbxref=Genbank:WP_228383567.1;Name=WP_228383567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14040;product=hypothetical protein;protein_id=WP_228383567.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2955616 2955942 . + . ID=gene-LNP58_RS14045;Name=LNP58_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14045;old_locus_tag=LNP58_14025 NZ_CP086372.1 Protein Homology CDS 2955616 2955942 . + 0 ID=cds-WP_011260082.1;Parent=gene-LNP58_RS14045;Dbxref=Genbank:WP_011260082.1;Name=WP_011260082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260082.1;locus_tag=LNP58_RS14045;product=hypothetical protein;protein_id=WP_011260082.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2955953 2956231 . - . ID=gene-LNP58_RS14050;Name=LNP58_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14050;old_locus_tag=LNP58_14030 NZ_CP086372.1 GeneMarkS-2+ CDS 2955953 2956231 . - 0 ID=cds-WP_228329631.1;Parent=gene-LNP58_RS14050;Dbxref=Genbank:WP_228329631.1;Name=WP_228329631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14050;product=hypothetical protein;protein_id=WP_228329631.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2956444 2956749 . - . ID=gene-LNP58_RS14055;Name=LNP58_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14055;old_locus_tag=LNP58_14035 NZ_CP086372.1 Protein Homology CDS 2956444 2956749 . - 0 ID=cds-WP_011409278.1;Parent=gene-LNP58_RS14055;Dbxref=Genbank:WP_011409278.1;Name=WP_011409278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304656.1;locus_tag=LNP58_RS14055;product=hypothetical protein;protein_id=WP_011409278.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2956838 2957779 . + . ID=gene-LNP58_RS14060;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LNP58_RS14060;old_locus_tag=LNP58_14040 NZ_CP086372.1 Protein Homology CDS 2956838 2957779 . + 0 ID=cds-WP_011260081.1;Parent=gene-LNP58_RS14060;Dbxref=Genbank:WP_011260081.1;Name=WP_011260081.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811802.1;locus_tag=LNP58_RS14060;product=prolyl aminopeptidase;protein_id=WP_011260081.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2957980 2958777 . - . ID=gene-LNP58_RS14065;Name=LNP58_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14065;old_locus_tag=LNP58_14045 NZ_CP086372.1 Protein Homology CDS 2957980 2958777 . - 0 ID=cds-WP_011260080.1;Parent=gene-LNP58_RS14065;Dbxref=Genbank:WP_011260080.1;Name=WP_011260080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260080.1;locus_tag=LNP58_RS14065;product=N-formylglutamate amidohydrolase;protein_id=WP_011260080.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2958758 2959309 . - . ID=gene-LNP58_RS14070;Name=LNP58_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14070;old_locus_tag=LNP58_14050 NZ_CP086372.1 Protein Homology CDS 2958758 2959309 . - 0 ID=cds-WP_011260079.1;Parent=gene-LNP58_RS14070;Dbxref=Genbank:WP_011260079.1;Name=WP_011260079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472542.1;locus_tag=LNP58_RS14070;product=NUDIX hydrolase;protein_id=WP_011260079.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2959306 2960292 . - . ID=gene-LNP58_RS14075;Name=LNP58_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14075;old_locus_tag=LNP58_14055 NZ_CP086372.1 Protein Homology CDS 2959306 2960292 . - 0 ID=cds-WP_011260078.1;Parent=gene-LNP58_RS14075;Dbxref=Genbank:WP_011260078.1;Name=WP_011260078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156966.1;locus_tag=LNP58_RS14075;product=exodeoxyribonuclease IX;protein_id=WP_011260078.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2960289 2960864 . - . ID=gene-LNP58_RS14080;Name=LNP58_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14080;old_locus_tag=LNP58_14060 NZ_CP086372.1 Protein Homology CDS 2960289 2960864 . - 0 ID=cds-WP_011409277.1;Parent=gene-LNP58_RS14080;Dbxref=Genbank:WP_011409277.1;Name=WP_011409277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915539.1;locus_tag=LNP58_RS14080;product=nitroreductase;protein_id=WP_011409277.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2961232 2963571 . + . ID=gene-LNP58_RS14085;Name=LNP58_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14085;old_locus_tag=LNP58_14065 NZ_CP086372.1 Protein Homology CDS 2961232 2963571 . + 0 ID=cds-WP_011260076.1;Parent=gene-LNP58_RS14085;Dbxref=Genbank:WP_011260076.1;Name=WP_011260076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915543.1;locus_tag=LNP58_RS14085;product=DUF1631 domain-containing protein;protein_id=WP_011260076.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2963717 2964814 . + . ID=gene-LNP58_RS14090;Name=LNP58_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14090;old_locus_tag=LNP58_14070 NZ_CP086372.1 Protein Homology CDS 2963717 2964814 . + 0 ID=cds-WP_011409276.1;Parent=gene-LNP58_RS14090;Dbxref=Genbank:WP_011409276.1;Name=WP_011409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488800.1;locus_tag=LNP58_RS14090;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_011409276.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2965212 2965697 . - . ID=gene-LNP58_RS14095;Name=LNP58_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14095;old_locus_tag=LNP58_14075 NZ_CP086372.1 Protein Homology CDS 2965212 2965697 . - 0 ID=cds-WP_027703741.1;Parent=gene-LNP58_RS14095;Dbxref=Genbank:WP_027703741.1;Name=WP_027703741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156962.1;locus_tag=LNP58_RS14095;product=DUF3106 domain-containing protein;protein_id=WP_027703741.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2965703 2966053 . - . ID=gene-LNP58_RS14100;Name=LNP58_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14100;old_locus_tag=LNP58_14080 NZ_CP086372.1 Protein Homology CDS 2965703 2966053 . - 0 ID=cds-WP_011260071.1;Parent=gene-LNP58_RS14100;Dbxref=Genbank:WP_011260071.1;Name=WP_011260071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578132.1;locus_tag=LNP58_RS14100;product=hypothetical protein;protein_id=WP_011260071.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2966050 2966631 . - . ID=gene-LNP58_RS14105;Name=LNP58_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14105;old_locus_tag=LNP58_14085 NZ_CP086372.1 Protein Homology CDS 2966050 2966631 . - 0 ID=cds-WP_069965062.1;Parent=gene-LNP58_RS14105;Dbxref=Genbank:WP_069965062.1;Name=WP_069965062.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156960.1;locus_tag=LNP58_RS14105;product=RNA polymerase sigma factor;protein_id=WP_069965062.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2966755 2967060 . + . ID=gene-LNP58_RS14110;Name=LNP58_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14110;old_locus_tag=LNP58_14090 NZ_CP086372.1 Protein Homology CDS 2966755 2967060 . + 0 ID=cds-WP_011409274.1;Parent=gene-LNP58_RS14110;Dbxref=Genbank:WP_011409274.1;Name=WP_011409274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488789.1;locus_tag=LNP58_RS14110;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_011409274.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2967057 2968556 . + . ID=gene-LNP58_RS14115;Name=LNP58_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14115;old_locus_tag=LNP58_14095 NZ_CP086372.1 Protein Homology CDS 2967057 2968556 . + 0 ID=cds-WP_069964594.1;Parent=gene-LNP58_RS14115;Dbxref=Genbank:WP_069964594.1;Name=WP_069964594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260068.1;locus_tag=LNP58_RS14115;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_069964594.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2968470 2969268 . - . ID=gene-LNP58_RS14120;Name=LNP58_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14120;old_locus_tag=LNP58_14100 NZ_CP086372.1 Protein Homology CDS 2968997 2969268 . - 0 ID=cds-WP_094187731.1-2;Parent=gene-LNP58_RS14120;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS14120;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 2968470 2968998 . - 1 ID=cds-WP_094187731.1-2;Parent=gene-LNP58_RS14120;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS14120;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2969472 2969696 . + . ID=gene-LNP58_RS14125;Name=LNP58_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14125;old_locus_tag=LNP58_14105 NZ_CP086372.1 Protein Homology CDS 2969472 2969696 . + 0 ID=cds-WP_027703428.1;Parent=gene-LNP58_RS14125;Dbxref=Genbank:WP_027703428.1;Name=WP_027703428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304579.1;locus_tag=LNP58_RS14125;product=hypothetical protein;protein_id=WP_027703428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2969811 2970230 . - . ID=gene-LNP58_RS14130;Name=LNP58_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14130;old_locus_tag=LNP58_14110 NZ_CP086372.1 Protein Homology CDS 2969811 2970230 . - 0 ID=cds-WP_011409271.1;Parent=gene-LNP58_RS14130;Dbxref=Genbank:WP_011409271.1;Name=WP_011409271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156959.1;locus_tag=LNP58_RS14130;product=hypothetical protein;protein_id=WP_011409271.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2970417 2970971 . + . ID=gene-LNP58_RS14135;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=LNP58_RS14135;old_locus_tag=LNP58_14115 NZ_CP086372.1 Protein Homology CDS 2970417 2970971 . + 0 ID=cds-WP_011260066.1;Parent=gene-LNP58_RS14135;Dbxref=Genbank:WP_011260066.1;Name=WP_011260066.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=sufT;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488784.1;locus_tag=LNP58_RS14135;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_011260066.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2971036 2972121 . + . ID=gene-LNP58_RS14140;Name=LNP58_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14140;old_locus_tag=LNP58_14120 NZ_CP086372.1 Protein Homology CDS 2971036 2972121 . + 0 ID=cds-WP_011260065.1;Parent=gene-LNP58_RS14140;Dbxref=Genbank:WP_011260065.1;Name=WP_011260065.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036086.1;locus_tag=LNP58_RS14140;product=branched-chain amino acid aminotransferase;protein_id=WP_011260065.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 2972438 2973592 . + . ID=gene-LNP58_RS14145;Name=LNP58_RS14145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14145;old_locus_tag=LNP58_14125;partial=true;pseudo=true;start_range=.,2972438 NZ_CP086372.1 Protein Homology CDS 2972438 2973592 . + 0 ID=cds-LNP58_RS14145;Parent=gene-LNP58_RS14145;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972507.1;locus_tag=LNP58_RS14145;partial=true;product=S8 family serine peptidase;pseudo=true;start_range=.,2972438;transl_table=11 NZ_CP086372.1 RefSeq gene 2973800 2974273 . - . ID=gene-LNP58_RS14150;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LNP58_RS14150;old_locus_tag=LNP58_14130 NZ_CP086372.1 Protein Homology CDS 2973800 2974273 . - 0 ID=cds-WP_011409268.1;Parent=gene-LNP58_RS14150;Dbxref=Genbank:WP_011409268.1;Name=WP_011409268.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988832.1;locus_tag=LNP58_RS14150;product=Cys-tRNA(Pro) deacylase;protein_id=WP_011409268.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2974278 2974763 . - . ID=gene-LNP58_RS14155;Name=LNP58_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14155;old_locus_tag=LNP58_14135 NZ_CP086372.1 Protein Homology CDS 2974278 2974763 . - 0 ID=cds-WP_011409267.1;Parent=gene-LNP58_RS14155;Dbxref=Genbank:WP_011409267.1;Name=WP_011409267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488754.1;locus_tag=LNP58_RS14155;product=asparaginase domain-containing protein;protein_id=WP_011409267.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2975277 2976497 . + . ID=gene-LNP58_RS14160;Name=LNP58_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14160;old_locus_tag=LNP58_14140 NZ_CP086372.1 Protein Homology CDS 2975277 2976497 . + 0 ID=cds-WP_011409266.1;Parent=gene-LNP58_RS14160;Dbxref=Genbank:WP_011409266.1;Name=WP_011409266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158669.1;locus_tag=LNP58_RS14160;product=xylanase;protein_id=WP_011409266.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2976502 2976576 . - . ID=gene-LNP58_RS14165;Name=LNP58_RS14165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS14165;old_locus_tag=LNP58_14145 NZ_CP086372.1 cmsearch ncRNA 2976502 2976576 . - . ID=rna-LNP58_RS14165;Parent=gene-LNP58_RS14165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS14165;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 2976502 2976576 . - . ID=exon-LNP58_RS14165-1;Parent=rna-LNP58_RS14165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS14165;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 2976706 2977053 . - . ID=gene-LNP58_RS14170;Name=LNP58_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14170;old_locus_tag=LNP58_14150 NZ_CP086372.1 Protein Homology CDS 2976706 2977053 . - 0 ID=cds-WP_041182600.1;Parent=gene-LNP58_RS14170;Dbxref=Genbank:WP_041182600.1;Name=WP_041182600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502128.1;locus_tag=LNP58_RS14170;product=DUF2069 domain-containing protein;protein_id=WP_041182600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2977050 2977646 . - . ID=gene-LNP58_RS14175;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LNP58_RS14175;old_locus_tag=LNP58_14155 NZ_CP086372.1 Protein Homology CDS 2977050 2977646 . - 0 ID=cds-WP_005925984.1;Parent=gene-LNP58_RS14175;Dbxref=Genbank:WP_005925984.1;Name=WP_005925984.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367335.1;locus_tag=LNP58_RS14175;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_005925984.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2977758 2979035 . + . ID=gene-LNP58_RS14180;Name=LNP58_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14180;old_locus_tag=LNP58_14160 NZ_CP086372.1 Protein Homology CDS 2977758 2979035 . + 0 ID=cds-WP_075242243.1;Parent=gene-LNP58_RS14180;Dbxref=Genbank:WP_075242243.1;Name=WP_075242243.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036096.1;locus_tag=LNP58_RS14180;product=YihY family inner membrane protein;protein_id=WP_075242243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2979032 2979634 . + . ID=gene-LNP58_RS14185;Name=LNP58_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14185;old_locus_tag=LNP58_14165 NZ_CP086372.1 Protein Homology CDS 2979032 2979634 . + 0 ID=cds-WP_011260055.1;Parent=gene-LNP58_RS14185;Dbxref=Genbank:WP_011260055.1;Name=WP_011260055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346527.1;locus_tag=LNP58_RS14185;product=TlpA disulfide reductase family protein;protein_id=WP_011260055.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2979634 2979900 . + . ID=gene-LNP58_RS14190;Name=LNP58_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14190;old_locus_tag=LNP58_14170 NZ_CP086372.1 Protein Homology CDS 2979634 2979900 . + 0 ID=cds-WP_011409264.1;Parent=gene-LNP58_RS14190;Dbxref=Genbank:WP_011409264.1;Name=WP_011409264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112879.1;locus_tag=LNP58_RS14190;product=acylphosphatase;protein_id=WP_011409264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2979986 2981215 . + . ID=gene-LNP58_RS14195;Name=LNP58_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14195;old_locus_tag=LNP58_14175 NZ_CP086372.1 Protein Homology CDS 2979986 2981215 . + 0 ID=cds-WP_011260053.1;Parent=gene-LNP58_RS14195;Dbxref=Genbank:WP_011260053.1;Name=WP_011260053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925993.1;locus_tag=LNP58_RS14195;product=hypothetical protein;protein_id=WP_011260053.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2981197 2981979 . - . ID=gene-LNP58_RS14200;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LNP58_RS14200;old_locus_tag=LNP58_14180 NZ_CP086372.1 Protein Homology CDS 2981197 2981979 . - 0 ID=cds-WP_011260052.1;Parent=gene-LNP58_RS14200;Dbxref=Genbank:WP_011260052.1;Name=WP_011260052.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965859.1;locus_tag=LNP58_RS14200;product=polyphosphate kinase 2;protein_id=WP_011260052.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2982012 2982530 . - . ID=gene-LNP58_RS14205;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=LNP58_RS14205;old_locus_tag=LNP58_14185 NZ_CP086372.1 Protein Homology CDS 2982012 2982530 . - 0 ID=cds-WP_011260051.1;Parent=gene-LNP58_RS14205;Dbxref=Genbank:WP_011260051.1;Name=WP_011260051.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346528.1;locus_tag=LNP58_RS14205;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_011260051.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2982996 2984702 . - . ID=gene-LNP58_RS14210;Name=LNP58_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14210;old_locus_tag=LNP58_14190 NZ_CP086372.1 Protein Homology CDS 2982996 2984702 . - 0 ID=cds-WP_011260050.1;Parent=gene-LNP58_RS14210;Dbxref=Genbank:WP_011260050.1;Name=WP_011260050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118468.1;locus_tag=LNP58_RS14210;product=tetratricopeptide repeat protein;protein_id=WP_011260050.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2984699 2985784 . - . ID=gene-LNP58_RS14215;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LNP58_RS14215;old_locus_tag=LNP58_14195 NZ_CP086372.1 Protein Homology CDS 2984699 2985784 . - 0 ID=cds-WP_011260049.1;Parent=gene-LNP58_RS14215;Dbxref=Genbank:WP_011260049.1;Name=WP_011260049.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=LNP58_RS14215;product=peptide chain release factor 1;protein_id=WP_011260049.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2985762 2987060 . - . ID=gene-LNP58_RS14220;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LNP58_RS14220;old_locus_tag=LNP58_14200 NZ_CP086372.1 Protein Homology CDS 2985762 2987060 . - 0 ID=cds-WP_011409263.1;Parent=gene-LNP58_RS14220;Dbxref=Genbank:WP_011409263.1;Name=WP_011409263.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450610.1;locus_tag=LNP58_RS14220;product=glutamyl-tRNA reductase;protein_id=WP_011409263.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2987126 2988814 . + . ID=gene-LNP58_RS14225;Name=LNP58_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14225;old_locus_tag=LNP58_14205 NZ_CP086372.1 Protein Homology CDS 2987126 2988814 . + 0 ID=cds-WP_011409262.1;Parent=gene-LNP58_RS14225;Dbxref=Genbank:WP_011409262.1;Name=WP_011409262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972526.1;locus_tag=LNP58_RS14225;product=tetratricopeptide repeat protein;protein_id=WP_011409262.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2988811 2989464 . + . ID=gene-LNP58_RS14230;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LNP58_RS14230;old_locus_tag=LNP58_14210 NZ_CP086372.1 Protein Homology CDS 2988811 2989464 . + 0 ID=cds-WP_011260046.1;Parent=gene-LNP58_RS14230;Dbxref=Genbank:WP_011260046.1;Name=WP_011260046.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172004.1;locus_tag=LNP58_RS14230;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_011260046.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2989446 2990333 . + . ID=gene-LNP58_RS14235;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LNP58_RS14235;old_locus_tag=LNP58_14215 NZ_CP086372.1 Protein Homology CDS 2989446 2990333 . + 0 ID=cds-WP_011260045.1;Parent=gene-LNP58_RS14235;Dbxref=Genbank:WP_011260045.1;Name=WP_011260045.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346534.1;locus_tag=LNP58_RS14235;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_011260045.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2990337 2990413 . + . ID=gene-LNP58_RS14240;Name=LNP58_RS14240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS14240;old_locus_tag=LNP58_14220 NZ_CP086372.1 tRNAscan-SE tRNA 2990337 2990413 . + . ID=rna-LNP58_RS14240;Parent=gene-LNP58_RS14240;anticodon=(pos:2990371..2990373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14240;product=tRNA-Gln NZ_CP086372.1 tRNAscan-SE exon 2990337 2990413 . + . ID=exon-LNP58_RS14240-1;Parent=rna-LNP58_RS14240;anticodon=(pos:2990371..2990373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14240;product=tRNA-Gln NZ_CP086372.1 RefSeq gene 2990541 2991500 . + . ID=gene-LNP58_RS14245;Name=LNP58_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14245;old_locus_tag=LNP58_14225 NZ_CP086372.1 Protein Homology CDS 2990541 2991500 . + 0 ID=cds-WP_011409260.1;Parent=gene-LNP58_RS14245;Dbxref=Genbank:WP_011409260.1;Name=WP_011409260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003428.0;locus_tag=LNP58_RS14245;product=ribose-phosphate diphosphokinase;protein_id=WP_011409260.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2991610 2992245 . + . ID=gene-LNP58_RS14250;Name=LNP58_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14250;old_locus_tag=LNP58_14230 NZ_CP086372.1 Protein Homology CDS 2991610 2992245 . + 0 ID=cds-WP_011260043.1;Parent=gene-LNP58_RS14250;Dbxref=Genbank:WP_011260043.1;Name=WP_011260043.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486759.1;locus_tag=LNP58_RS14250;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_011260043.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2992297 2992881 . + . ID=gene-LNP58_RS14255;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LNP58_RS14255;old_locus_tag=LNP58_14235 NZ_CP086372.1 Protein Homology CDS 2992297 2992881 . + 0 ID=cds-WP_044756498.1;Parent=gene-LNP58_RS14255;Dbxref=Genbank:WP_044756498.1;Name=WP_044756498.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968854.1;locus_tag=LNP58_RS14255;product=aminoacyl-tRNA hydrolase;protein_id=WP_044756498.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2992956 2994047 . + . ID=gene-LNP58_RS14260;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LNP58_RS14260;old_locus_tag=LNP58_14240 NZ_CP086372.1 Protein Homology CDS 2992956 2994047 . + 0 ID=cds-WP_011260041.1;Parent=gene-LNP58_RS14260;Dbxref=Genbank:WP_011260041.1;Name=WP_011260041.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506572.1;locus_tag=LNP58_RS14260;product=redox-regulated ATPase YchF;protein_id=WP_011260041.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2994201 2994286 . + . ID=gene-LNP58_RS14265;Name=LNP58_RS14265;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS14265;old_locus_tag=LNP58_14245 NZ_CP086372.1 tRNAscan-SE tRNA 2994201 2994286 . + . ID=rna-LNP58_RS14265;Parent=gene-LNP58_RS14265;anticodon=(pos:2994235..2994237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14265;product=tRNA-Tyr NZ_CP086372.1 tRNAscan-SE exon 2994201 2994286 . + . ID=exon-LNP58_RS14265-1;Parent=rna-LNP58_RS14265;anticodon=(pos:2994235..2994237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14265;product=tRNA-Tyr NZ_CP086372.1 RefSeq gene 2994316 2994389 . + . ID=gene-LNP58_RS14270;Name=LNP58_RS14270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS14270;old_locus_tag=LNP58_14250 NZ_CP086372.1 tRNAscan-SE tRNA 2994316 2994389 . + . ID=rna-LNP58_RS14270;Parent=gene-LNP58_RS14270;anticodon=(pos:2994348..2994350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14270;product=tRNA-Gly NZ_CP086372.1 tRNAscan-SE exon 2994316 2994389 . + . ID=exon-LNP58_RS14270-1;Parent=rna-LNP58_RS14270;anticodon=(pos:2994348..2994350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14270;product=tRNA-Gly NZ_CP086372.1 RefSeq gene 2994424 2994499 . + . ID=gene-LNP58_RS14275;Name=LNP58_RS14275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS14275;old_locus_tag=LNP58_14255 NZ_CP086372.1 tRNAscan-SE tRNA 2994424 2994499 . + . ID=rna-LNP58_RS14275;Parent=gene-LNP58_RS14275;anticodon=(pos:2994457..2994459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14275;product=tRNA-Thr NZ_CP086372.1 tRNAscan-SE exon 2994424 2994499 . + . ID=exon-LNP58_RS14275-1;Parent=rna-LNP58_RS14275;anticodon=(pos:2994457..2994459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14275;product=tRNA-Thr NZ_CP086372.1 RefSeq gene 2994546 2995736 . + . ID=gene-LNP58_RS14280;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LNP58_RS14280;old_locus_tag=LNP58_14260 NZ_CP086372.1 Protein Homology CDS 2994546 2995736 . + 0 ID=cds-WP_011260030.1;Parent=gene-LNP58_RS14280;Dbxref=Genbank:WP_011260030.1;Name=WP_011260030.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LNP58_RS14280;product=elongation factor Tu;protein_id=WP_011260030.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2995842 2995917 . + . ID=gene-LNP58_RS14285;Name=LNP58_RS14285;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS14285;old_locus_tag=LNP58_14265 NZ_CP086372.1 tRNAscan-SE tRNA 2995842 2995917 . + . ID=rna-LNP58_RS14285;Parent=gene-LNP58_RS14285;anticodon=(pos:2995875..2995877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14285;product=tRNA-Trp NZ_CP086372.1 tRNAscan-SE exon 2995842 2995917 . + . ID=exon-LNP58_RS14285-1;Parent=rna-LNP58_RS14285;anticodon=(pos:2995875..2995877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS14285;product=tRNA-Trp NZ_CP086372.1 RefSeq gene 2995967 2996377 . + . ID=gene-LNP58_RS14290;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LNP58_RS14290;old_locus_tag=LNP58_14270 NZ_CP086372.1 Protein Homology CDS 2995967 2996377 . + 0 ID=cds-WP_011260040.1;Parent=gene-LNP58_RS14290;Dbxref=Genbank:WP_011260040.1;Name=WP_011260040.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993330.1;locus_tag=LNP58_RS14290;product=preprotein translocase subunit SecE;protein_id=WP_011260040.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2996391 2996948 . + . ID=gene-LNP58_RS14295;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LNP58_RS14295;old_locus_tag=LNP58_14275 NZ_CP086372.1 Protein Homology CDS 2996391 2996948 . + 0 ID=cds-WP_011409259.1;Parent=gene-LNP58_RS14295;Dbxref=Genbank:WP_011409259.1;Name=WP_011409259.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162956.1;locus_tag=LNP58_RS14295;product=transcription termination/antitermination protein NusG;protein_id=WP_011409259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2997145 2997573 . + . ID=gene-LNP58_RS14300;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LNP58_RS14300;old_locus_tag=LNP58_14280 NZ_CP086372.1 Protein Homology CDS 2997145 2997573 . + 0 ID=cds-WP_011260038.1;Parent=gene-LNP58_RS14300;Dbxref=Genbank:WP_011260038.1;Name=WP_011260038.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=LNP58_RS14300;product=50S ribosomal protein L11;protein_id=WP_011260038.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2997577 2998275 . + . ID=gene-LNP58_RS14305;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LNP58_RS14305;old_locus_tag=LNP58_14285 NZ_CP086372.1 Protein Homology CDS 2997577 2998275 . + 0 ID=cds-WP_011409258.1;Parent=gene-LNP58_RS14305;Dbxref=Genbank:WP_011409258.1;Name=WP_011409258.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341341.1;locus_tag=LNP58_RS14305;product=50S ribosomal protein L1;protein_id=WP_011409258.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2998821 2999354 . + . ID=gene-LNP58_RS14310;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LNP58_RS14310;old_locus_tag=LNP58_14290 NZ_CP086372.1 Protein Homology CDS 2998821 2999354 . + 0 ID=cds-WP_014502152.1;Parent=gene-LNP58_RS14310;Dbxref=Genbank:WP_014502152.1;Name=WP_014502152.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036116.1;locus_tag=LNP58_RS14310;product=50S ribosomal protein L10;protein_id=WP_014502152.1;transl_table=11 NZ_CP086372.1 RefSeq gene 2999409 2999774 . + . ID=gene-LNP58_RS14315;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LNP58_RS14315;old_locus_tag=LNP58_14295 NZ_CP086372.1 Protein Homology CDS 2999409 2999774 . + 0 ID=cds-WP_053502914.1;Parent=gene-LNP58_RS14315;Dbxref=Genbank:WP_053502914.1;Name=WP_053502914.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574194.1;locus_tag=LNP58_RS14315;product=50S ribosomal protein L7/L12;protein_id=WP_053502914.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3000087 3004238 . + . ID=gene-LNP58_RS14320;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LNP58_RS14320;old_locus_tag=LNP58_14300 NZ_CP086372.1 Protein Homology CDS 3000087 3004238 . + 0 ID=cds-WP_011260034.1;Parent=gene-LNP58_RS14320;Dbxref=Genbank:WP_011260034.1;Name=WP_011260034.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930752.1;locus_tag=LNP58_RS14320;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_011260034.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3004389 3008606 . + . ID=gene-LNP58_RS14325;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LNP58_RS14325;old_locus_tag=LNP58_14305 NZ_CP086372.1 Protein Homology CDS 3004389 3008606 . + 0 ID=cds-WP_011260033.1;Parent=gene-LNP58_RS14325;Dbxref=Genbank:WP_011260033.1;Name=WP_011260033.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036119.1;locus_tag=LNP58_RS14325;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_011260033.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3008825 3009199 . + . ID=gene-LNP58_RS14330;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LNP58_RS14330;old_locus_tag=LNP58_14310 NZ_CP086372.1 Protein Homology CDS 3008825 3009199 . + 0 ID=cds-WP_002811712.1;Parent=gene-LNP58_RS14330;Dbxref=Genbank:WP_002811712.1;Name=WP_002811712.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=LNP58_RS14330;product=30S ribosomal protein S12;protein_id=WP_002811712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3009212 3009679 . + . ID=gene-LNP58_RS14335;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LNP58_RS14335;old_locus_tag=LNP58_14315 NZ_CP086372.1 Protein Homology CDS 3009212 3009679 . + 0 ID=cds-WP_011260032.1;Parent=gene-LNP58_RS14335;Dbxref=Genbank:WP_011260032.1;Name=WP_011260032.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=LNP58_RS14335;product=30S ribosomal protein S7;protein_id=WP_011260032.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3009818 3011935 . + . ID=gene-LNP58_RS14340;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LNP58_RS14340;old_locus_tag=LNP58_14320 NZ_CP086372.1 Protein Homology CDS 3009818 3011935 . + 0 ID=cds-WP_011260031.1;Parent=gene-LNP58_RS14340;Dbxref=Genbank:WP_011260031.1;Name=WP_011260031.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156211.1;locus_tag=LNP58_RS14340;product=elongation factor G;protein_id=WP_011260031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3011985 3013175 . + . ID=gene-LNP58_RS14345;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LNP58_RS14345;old_locus_tag=LNP58_14325 NZ_CP086372.1 Protein Homology CDS 3011985 3013175 . + 0 ID=cds-WP_011260030.1-2;Parent=gene-LNP58_RS14345;Dbxref=Genbank:WP_011260030.1;Name=WP_011260030.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LNP58_RS14345;product=elongation factor Tu;protein_id=WP_011260030.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3013491 3014166 . - . ID=gene-LNP58_RS14350;Name=LNP58_RS14350;end_range=3014166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14350;old_locus_tag=LNP58_14330;partial=true;pseudo=true;start_range=.,3013491 NZ_CP086372.1 Protein Homology CDS 3013491 3014166 . - 0 ID=cds-LNP58_RS14350;Parent=gene-LNP58_RS14350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=3014166,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LNP58_RS14350;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3013491;transl_table=11 NZ_CP086372.1 RefSeq gene 3014956 3015270 . + . ID=gene-LNP58_RS14355;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LNP58_RS14355;old_locus_tag=LNP58_14335 NZ_CP086372.1 Protein Homology CDS 3014956 3015270 . + 0 ID=cds-WP_011409257.1;Parent=gene-LNP58_RS14355;Dbxref=Genbank:WP_011409257.1;Name=WP_011409257.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=LNP58_RS14355;product=30S ribosomal protein S10;protein_id=WP_011409257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3015282 3015932 . + . ID=gene-LNP58_RS14360;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LNP58_RS14360;old_locus_tag=LNP58_14340 NZ_CP086372.1 Protein Homology CDS 3015282 3015932 . + 0 ID=cds-WP_011260029.1;Parent=gene-LNP58_RS14360;Dbxref=Genbank:WP_011260029.1;Name=WP_011260029.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036123.1;locus_tag=LNP58_RS14360;product=50S ribosomal protein L3;protein_id=WP_011260029.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3015945 3016550 . + . ID=gene-LNP58_RS14365;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LNP58_RS14365;old_locus_tag=LNP58_14345 NZ_CP086372.1 Protein Homology CDS 3015945 3016550 . + 0 ID=cds-WP_011260028.1;Parent=gene-LNP58_RS14365;Dbxref=Genbank:WP_011260028.1;Name=WP_011260028.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=LNP58_RS14365;product=50S ribosomal protein L4;protein_id=WP_011260028.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3016547 3016846 . + . ID=gene-LNP58_RS14370;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LNP58_RS14370;old_locus_tag=LNP58_14350 NZ_CP086372.1 Protein Homology CDS 3016547 3016846 . + 0 ID=cds-WP_003486717.1;Parent=gene-LNP58_RS14370;Dbxref=Genbank:WP_003486717.1;Name=WP_003486717.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145338.1;locus_tag=LNP58_RS14370;product=50S ribosomal protein L23;protein_id=WP_003486717.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3016857 3017684 . + . ID=gene-LNP58_RS14375;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LNP58_RS14375;old_locus_tag=LNP58_14355 NZ_CP086372.1 Protein Homology CDS 3016857 3017684 . + 0 ID=cds-WP_011260027.1;Parent=gene-LNP58_RS14375;Dbxref=Genbank:WP_011260027.1;Name=WP_011260027.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=LNP58_RS14375;product=50S ribosomal protein L2;protein_id=WP_011260027.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3017691 3017960 . + . ID=gene-LNP58_RS14380;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LNP58_RS14380;old_locus_tag=LNP58_14360 NZ_CP086372.1 Protein Homology CDS 3017691 3017960 . + 0 ID=cds-WP_005993369.1;Parent=gene-LNP58_RS14380;Dbxref=Genbank:WP_005993369.1;Name=WP_005993369.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341594.1;locus_tag=LNP58_RS14380;product=30S ribosomal protein S19;protein_id=WP_005993369.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3017973 3018308 . + . ID=gene-LNP58_RS14385;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LNP58_RS14385;old_locus_tag=LNP58_14365 NZ_CP086372.1 Protein Homology CDS 3017973 3018308 . + 0 ID=cds-WP_002811686.1;Parent=gene-LNP58_RS14385;Dbxref=Genbank:WP_002811686.1;Name=WP_002811686.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=LNP58_RS14385;product=50S ribosomal protein L22;protein_id=WP_002811686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3018326 3019060 . + . ID=gene-LNP58_RS14390;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LNP58_RS14390;old_locus_tag=LNP58_14370 NZ_CP086372.1 Protein Homology CDS 3018326 3019060 . + 0 ID=cds-WP_005993372.1;Parent=gene-LNP58_RS14390;Dbxref=Genbank:WP_005993372.1;Name=WP_005993372.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811684.1;locus_tag=LNP58_RS14390;product=30S ribosomal protein S3;protein_id=WP_005993372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3019066 3019479 . + . ID=gene-LNP58_RS14395;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LNP58_RS14395;old_locus_tag=LNP58_14375 NZ_CP086372.1 Protein Homology CDS 3019066 3019479 . + 0 ID=cds-WP_003486706.1;Parent=gene-LNP58_RS14395;Dbxref=Genbank:WP_003486706.1;Name=WP_003486706.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=LNP58_RS14395;product=50S ribosomal protein L16;protein_id=WP_003486706.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3019479 3019664 . + . ID=gene-LNP58_RS14400;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LNP58_RS14400;old_locus_tag=LNP58_14380 NZ_CP086372.1 Protein Homology CDS 3019479 3019664 . + 0 ID=cds-WP_003486703.1;Parent=gene-LNP58_RS14400;Dbxref=Genbank:WP_003486703.1;Name=WP_003486703.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050639.1;locus_tag=LNP58_RS14400;product=50S ribosomal protein L29;protein_id=WP_003486703.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3019676 3019945 . + . ID=gene-LNP58_RS14405;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LNP58_RS14405;old_locus_tag=LNP58_14385 NZ_CP086372.1 Protein Homology CDS 3019676 3019945 . + 0 ID=cds-WP_003486701.1;Parent=gene-LNP58_RS14405;Dbxref=Genbank:WP_003486701.1;Name=WP_003486701.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154489.1;locus_tag=LNP58_RS14405;product=30S ribosomal protein S17;protein_id=WP_003486701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3019960 3020328 . + . ID=gene-LNP58_RS14410;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LNP58_RS14410;old_locus_tag=LNP58_14390 NZ_CP086372.1 Protein Homology CDS 3019960 3020328 . + 0 ID=cds-WP_011260026.1;Parent=gene-LNP58_RS14410;Dbxref=Genbank:WP_011260026.1;Name=WP_011260026.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LNP58_RS14410;product=50S ribosomal protein L14;protein_id=WP_011260026.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3020344 3020661 . + . ID=gene-LNP58_RS14415;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LNP58_RS14415;old_locus_tag=LNP58_14395 NZ_CP086372.1 Protein Homology CDS 3020344 3020661 . + 0 ID=cds-WP_011260025.1;Parent=gene-LNP58_RS14415;Dbxref=Genbank:WP_011260025.1;Name=WP_011260025.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=LNP58_RS14415;product=50S ribosomal protein L24;protein_id=WP_011260025.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3020673 3021215 . + . ID=gene-LNP58_RS14420;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LNP58_RS14420;old_locus_tag=LNP58_14400 NZ_CP086372.1 Protein Homology CDS 3020673 3021215 . + 0 ID=cds-WP_011260024.1;Parent=gene-LNP58_RS14420;Dbxref=Genbank:WP_011260024.1;Name=WP_011260024.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486694.1;locus_tag=LNP58_RS14420;product=50S ribosomal protein L5;protein_id=WP_011260024.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3021234 3021539 . + . ID=gene-LNP58_RS14425;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LNP58_RS14425;old_locus_tag=LNP58_14405 NZ_CP086372.1 Protein Homology CDS 3021234 3021539 . + 0 ID=cds-WP_005917137.1;Parent=gene-LNP58_RS14425;Dbxref=Genbank:WP_005917137.1;Name=WP_005917137.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917137.1;locus_tag=LNP58_RS14425;product=30S ribosomal protein S14;protein_id=WP_005917137.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3021745 3022143 . + . ID=gene-LNP58_RS14430;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LNP58_RS14430;old_locus_tag=LNP58_14410 NZ_CP086372.1 Protein Homology CDS 3021745 3022143 . + 0 ID=cds-WP_011260023.1;Parent=gene-LNP58_RS14430;Dbxref=Genbank:WP_011260023.1;Name=WP_011260023.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=LNP58_RS14430;product=30S ribosomal protein S8;protein_id=WP_011260023.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3022159 3022686 . + . ID=gene-LNP58_RS14435;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LNP58_RS14435;old_locus_tag=LNP58_14415 NZ_CP086372.1 Protein Homology CDS 3022159 3022686 . + 0 ID=cds-WP_011260022.1;Parent=gene-LNP58_RS14435;Dbxref=Genbank:WP_011260022.1;Name=WP_011260022.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=LNP58_RS14435;product=50S ribosomal protein L6;protein_id=WP_011260022.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3022775 3023134 . + . ID=gene-LNP58_RS14440;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LNP58_RS14440;old_locus_tag=LNP58_14420 NZ_CP086372.1 Protein Homology CDS 3022775 3023134 . + 0 ID=cds-WP_010371104.1;Parent=gene-LNP58_RS14440;Dbxref=Genbank:WP_010371104.1;Name=WP_010371104.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811659.1;locus_tag=LNP58_RS14440;product=50S ribosomal protein L18;protein_id=WP_010371104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3023293 3023835 . + . ID=gene-LNP58_RS14445;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LNP58_RS14445;old_locus_tag=LNP58_14425 NZ_CP086372.1 Protein Homology CDS 3023293 3023835 . + 0 ID=cds-WP_003486682.1;Parent=gene-LNP58_RS14445;Dbxref=Genbank:WP_003486682.1;Name=WP_003486682.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145411.1;locus_tag=LNP58_RS14445;product=30S ribosomal protein S5;protein_id=WP_003486682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3023828 3024019 . + . ID=gene-LNP58_RS14450;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LNP58_RS14450;old_locus_tag=LNP58_14430 NZ_CP086372.1 Protein Homology CDS 3023828 3024019 . + 0 ID=cds-WP_003486678.1;Parent=gene-LNP58_RS14450;Dbxref=Genbank:WP_003486678.1;Name=WP_003486678.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486678.1;locus_tag=LNP58_RS14450;product=50S ribosomal protein L30;protein_id=WP_003486678.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3024024 3024467 . + . ID=gene-LNP58_RS14455;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LNP58_RS14455;old_locus_tag=LNP58_14435 NZ_CP086372.1 Protein Homology CDS 3024024 3024467 . + 0 ID=cds-WP_011260021.1;Parent=gene-LNP58_RS14455;Dbxref=Genbank:WP_011260021.1;Name=WP_011260021.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=LNP58_RS14455;product=50S ribosomal protein L15;protein_id=WP_011260021.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3024475 3025839 . + . ID=gene-LNP58_RS14460;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LNP58_RS14460;old_locus_tag=LNP58_14440 NZ_CP086372.1 Protein Homology CDS 3024475 3025839 . + 0 ID=cds-WP_011409256.1;Parent=gene-LNP58_RS14460;Dbxref=Genbank:WP_011409256.1;Name=WP_011409256.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486674.1;locus_tag=LNP58_RS14460;product=preprotein translocase subunit SecY;protein_id=WP_011409256.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3026172 3026528 . + . ID=gene-LNP58_RS14465;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LNP58_RS14465;old_locus_tag=LNP58_14445 NZ_CP086372.1 Protein Homology CDS 3026172 3026528 . + 0 ID=cds-WP_003486672.1;Parent=gene-LNP58_RS14465;Dbxref=Genbank:WP_003486672.1;Name=WP_003486672.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154500.1;locus_tag=LNP58_RS14465;product=30S ribosomal protein S13;protein_id=WP_003486672.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3026539 3026931 . + . ID=gene-LNP58_RS14470;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LNP58_RS14470;old_locus_tag=LNP58_14450 NZ_CP086372.1 Protein Homology CDS 3026539 3026931 . + 0 ID=cds-WP_011260019.1;Parent=gene-LNP58_RS14470;Dbxref=Genbank:WP_011260019.1;Name=WP_011260019.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996786.1;locus_tag=LNP58_RS14470;product=30S ribosomal protein S11;protein_id=WP_011260019.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3026947 3027573 . + . ID=gene-LNP58_RS14475;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LNP58_RS14475;old_locus_tag=LNP58_14455 NZ_CP086372.1 Protein Homology CDS 3026947 3027573 . + 0 ID=cds-WP_044756501.1;Parent=gene-LNP58_RS14475;Dbxref=Genbank:WP_044756501.1;Name=WP_044756501.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145446.1;locus_tag=LNP58_RS14475;product=30S ribosomal protein S4;protein_id=WP_044756501.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3027627 3028625 . + . ID=gene-LNP58_RS14480;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LNP58_RS14480;old_locus_tag=LNP58_14460 NZ_CP086372.1 Protein Homology CDS 3027627 3028625 . + 0 ID=cds-WP_002811635.1;Parent=gene-LNP58_RS14480;Dbxref=Genbank:WP_002811635.1;Name=WP_002811635.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=LNP58_RS14480;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002811635.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3028807 3029190 . + . ID=gene-LNP58_RS14485;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LNP58_RS14485;old_locus_tag=LNP58_14465 NZ_CP086372.1 Protein Homology CDS 3028807 3029190 . + 0 ID=cds-WP_003486665.1;Parent=gene-LNP58_RS14485;Dbxref=Genbank:WP_003486665.1;Name=WP_003486665.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1;locus_tag=LNP58_RS14485;product=50S ribosomal protein L17;protein_id=WP_003486665.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3029324 3030382 . - . ID=gene-LNP58_RS14490;Name=LNP58_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14490;old_locus_tag=LNP58_14470 NZ_CP086372.1 Protein Homology CDS 3029324 3030382 . - 0 ID=cds-WP_228329632.1;Parent=gene-LNP58_RS14490;Dbxref=Genbank:WP_228329632.1;Name=WP_228329632.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409255.1;locus_tag=LNP58_RS14490;product=IS630 family transposase;protein_id=WP_228329632.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3030564 3031327 . - . ID=gene-LNP58_RS14495;Name=LNP58_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14495;old_locus_tag=LNP58_14475 NZ_CP086372.1 Protein Homology CDS 3031012 3031327 . - 0 ID=cds-WP_094187715.1-7;Parent=gene-LNP58_RS14495;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS14495;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3030564 3031012 . - 2 ID=cds-WP_094187715.1-7;Parent=gene-LNP58_RS14495;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS14495;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3031484 3032440 . + . ID=gene-LNP58_RS14500;Name=LNP58_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14500;old_locus_tag=LNP58_14480 NZ_CP086372.1 Protein Homology CDS 3031484 3032440 . + 0 ID=cds-WP_228329633.1;Parent=gene-LNP58_RS14500;Dbxref=Genbank:WP_228329633.1;Name=WP_228329633.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS14500;product=IS30-like element IS1112a family transposase;protein_id=WP_228329633.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3032539 3033580 . + . ID=gene-LNP58_RS14505;Name=LNP58_RS14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14505;old_locus_tag=LNP58_14485;pseudo=true NZ_CP086372.1 Protein Homology CDS 3032539 3033580 . + 0 ID=cds-LNP58_RS14505;Parent=gene-LNP58_RS14505;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS14505;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3033612 3033695 . - . ID=gene-LNP58_RS14510;Name=LNP58_RS14510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14510;old_locus_tag=LNP58_14490;partial=true;pseudo=true;start_range=.,3033612 NZ_CP086372.1 Protein Homology CDS 3033612 3033695 . - 0 ID=cds-LNP58_RS14510;Parent=gene-LNP58_RS14510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS14510;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3033612;transl_table=11 NZ_CP086372.1 RefSeq gene 3033841 3034926 . - . ID=gene-LNP58_RS14515;Name=LNP58_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14515;old_locus_tag=LNP58_14495 NZ_CP086372.1 Protein Homology CDS 3033841 3034926 . - 0 ID=cds-WP_011409252.1;Parent=gene-LNP58_RS14515;Dbxref=Genbank:WP_011409252.1;Name=WP_011409252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305349.1;locus_tag=LNP58_RS14515;product=DUF3396 domain-containing protein;protein_id=WP_011409252.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3034923 3035993 . - . ID=gene-LNP58_RS14520;Name=LNP58_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14520;old_locus_tag=LNP58_14500 NZ_CP086372.1 Protein Homology CDS 3034923 3035993 . - 0 ID=cds-WP_011409251.1;Parent=gene-LNP58_RS14520;Dbxref=Genbank:WP_011409251.1;Name=WP_011409251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=LNP58_RS14520;product=DUF3396 domain-containing protein;protein_id=WP_011409251.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3036001 3036696 . - . ID=gene-LNP58_RS14525;Name=LNP58_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14525;old_locus_tag=LNP58_14505 NZ_CP086372.1 Protein Homology CDS 3036001 3036696 . - 0 ID=cds-WP_011409250.1;Parent=gene-LNP58_RS14525;Dbxref=Genbank:WP_011409250.1;Name=WP_011409250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409250.1;locus_tag=LNP58_RS14525;product=VRR-NUC domain-containing protein;protein_id=WP_011409250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3036693 3037142 . - . ID=gene-LNP58_RS14530;Name=LNP58_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14530;old_locus_tag=LNP58_14510 NZ_CP086372.1 Protein Homology CDS 3036693 3037142 . - 0 ID=cds-WP_011409249.1;Parent=gene-LNP58_RS14530;Dbxref=Genbank:WP_011409249.1;Name=WP_011409249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409249.1;locus_tag=LNP58_RS14530;product=hypothetical protein;protein_id=WP_011409249.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3037472 3040426 . - . ID=gene-LNP58_RS14535;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LNP58_RS14535;old_locus_tag=LNP58_14515 NZ_CP086372.1 Protein Homology CDS 3037472 3040426 . - 0 ID=cds-WP_069965063.1;Parent=gene-LNP58_RS14535;Dbxref=Genbank:WP_069965063.1;Name=WP_069965063.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050782.1;locus_tag=LNP58_RS14535;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_069965063.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 3040526 3040640 . - . ID=id-NZ_CP086372.1:3040526..3040640;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq gene 3040894 3041076 . - . ID=gene-LNP58_RS14540;Name=raxX;gbkey=Gene;gene=raxX;gene_biotype=protein_coding;locus_tag=LNP58_RS14540;old_locus_tag=LNP58_14520 NZ_CP086372.1 Protein Homology CDS 3040894 3041076 . - 0 ID=cds-WP_027703308.1;Parent=gene-LNP58_RS14540;Dbxref=Genbank:WP_027703308.1;Name=WP_027703308.1;gbkey=CDS;gene=raxX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154694.1;locus_tag=LNP58_RS14540;product=RaxX family RiPP;protein_id=WP_027703308.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3041507 3042310 . + . ID=gene-LNP58_RS14545;Name=raxST;gbkey=Gene;gene=raxST;gene_biotype=protein_coding;locus_tag=LNP58_RS14545;old_locus_tag=LNP58_14525 NZ_CP086372.1 Protein Homology CDS 3041507 3042310 . + 0 ID=cds-WP_027703307.1;Parent=gene-LNP58_RS14545;Dbxref=Genbank:WP_027703307.1;Name=WP_027703307.1;gbkey=CDS;gene=raxST;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160223.1;locus_tag=LNP58_RS14545;product=RiPP modification sulfotransferase RaxST;protein_id=WP_027703307.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3042291 3043610 . + . ID=gene-LNP58_RS14550;Name=LNP58_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14550;old_locus_tag=LNP58_14530 NZ_CP086372.1 Protein Homology CDS 3042291 3043610 . + 0 ID=cds-WP_011260007.1;Parent=gene-LNP58_RS14550;Dbxref=Genbank:WP_011260007.1;Name=WP_011260007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154692.1;locus_tag=LNP58_RS14550;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_011260007.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3043607 3045766 . + . ID=gene-LNP58_RS14555;Name=raxB;gbkey=Gene;gene=raxB;gene_biotype=protein_coding;locus_tag=LNP58_RS14555;old_locus_tag=LNP58_14535 NZ_CP086372.1 Protein Homology CDS 3043607 3045766 . + 0 ID=cds-WP_011409245.1;Parent=gene-LNP58_RS14555;Dbxref=Genbank:WP_011409245.1;Name=WP_011409245.1;Note=Cleaves RaxX at a Gly-Gly motif on export.;gbkey=CDS;gene=raxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302887.1;locus_tag=LNP58_RS14555;product=peptidase domain-containing ABC transporter RaxB;protein_id=WP_011409245.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3046061 3047091 . + . ID=gene-LNP58_RS14560;Name=LNP58_RS14560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14560;old_locus_tag=LNP58_14540;pseudo=true NZ_CP086372.1 Protein Homology CDS 3046061 3047091 . + 0 ID=cds-LNP58_RS14560;Parent=gene-LNP58_RS14560;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930283.1;locus_tag=LNP58_RS14560;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3047108 3047512 . + . ID=gene-LNP58_RS14565;Name=LNP58_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14565;old_locus_tag=LNP58_14545 NZ_CP086372.1 Protein Homology CDS 3047108 3047512 . + 0 ID=cds-WP_011260005.1;Parent=gene-LNP58_RS14565;Dbxref=Genbank:WP_011260005.1;Name=WP_011260005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154690.1;locus_tag=LNP58_RS14565;product=hypothetical protein;protein_id=WP_011260005.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3047594 3049612 . - . ID=gene-LNP58_RS14570;Name=LNP58_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14570;old_locus_tag=LNP58_14550 NZ_CP086372.1 Protein Homology CDS 3047594 3049612 . - 0 ID=cds-WP_075242315.1;Parent=gene-LNP58_RS14570;Dbxref=Genbank:WP_075242315.1;Name=WP_075242315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484383.1;locus_tag=LNP58_RS14570;product=M2 family metallopeptidase;protein_id=WP_075242315.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3049724 3051394 . - . ID=gene-LNP58_RS14575;Name=LNP58_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14575;old_locus_tag=LNP58_14555 NZ_CP086372.1 Protein Homology CDS 3049724 3051394 . - 0 ID=cds-WP_011409242.1;Parent=gene-LNP58_RS14575;Dbxref=Genbank:WP_011409242.1;Name=WP_011409242.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577029.1;locus_tag=LNP58_RS14575;product=phosphoethanolamine--lipid A transferase;protein_id=WP_011409242.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3051391 3052155 . - . ID=gene-LNP58_RS14580;Name=LNP58_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14580;old_locus_tag=LNP58_14560 NZ_CP086372.1 Protein Homology CDS 3051391 3052155 . - 0 ID=cds-WP_011409241.1;Parent=gene-LNP58_RS14580;Dbxref=Genbank:WP_011409241.1;Name=WP_011409241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089620.1;locus_tag=LNP58_RS14580;product=phosphatase PAP2 family protein;protein_id=WP_011409241.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3052255 3053988 . - . ID=gene-LNP58_RS14585;Name=LNP58_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14585;old_locus_tag=LNP58_14565 NZ_CP086372.1 Protein Homology CDS 3052255 3053988 . - 0 ID=cds-WP_041182250.1;Parent=gene-LNP58_RS14585;Dbxref=Genbank:WP_041182250.1;Name=WP_041182250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930293.1;locus_tag=LNP58_RS14585;product=glycosyltransferase family 39 protein;protein_id=WP_041182250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3054207 3054923 . + . ID=gene-LNP58_RS14590;Name=LNP58_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14590;old_locus_tag=LNP58_14570 NZ_CP086372.1 Protein Homology CDS 3054207 3054923 . + 0 ID=cds-WP_011409239.1;Parent=gene-LNP58_RS14590;Dbxref=Genbank:WP_011409239.1;Name=WP_011409239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484375.1;locus_tag=LNP58_RS14590;product=response regulator transcription factor;protein_id=WP_011409239.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3054916 3056208 . + . ID=gene-LNP58_RS14595;Name=LNP58_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14595;old_locus_tag=LNP58_14575 NZ_CP086372.1 Protein Homology CDS 3054916 3056208 . + 0 ID=cds-WP_011409238.1;Parent=gene-LNP58_RS14595;Dbxref=Genbank:WP_011409238.1;Name=WP_011409238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303739.1;locus_tag=LNP58_RS14595;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_011409238.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3056360 3056851 . - . ID=gene-LNP58_RS14600;Name=LNP58_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14600;old_locus_tag=LNP58_14580 NZ_CP086372.1 Protein Homology CDS 3056360 3056851 . - 0 ID=cds-WP_027703304.1;Parent=gene-LNP58_RS14600;Dbxref=Genbank:WP_027703304.1;Name=WP_027703304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484372.1;locus_tag=LNP58_RS14600;product=hypothetical protein;protein_id=WP_027703304.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3056920 3057177 . - . ID=gene-LNP58_RS14605;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LNP58_RS14605;old_locus_tag=LNP58_14585 NZ_CP086372.1 Protein Homology CDS 3056920 3057177 . - 0 ID=cds-WP_003484370.1;Parent=gene-LNP58_RS14605;Dbxref=Genbank:WP_003484370.1;Name=WP_003484370.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036323.1;locus_tag=LNP58_RS14605;product=cell division topological specificity factor MinE;protein_id=WP_003484370.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3057180 3057989 . - . ID=gene-LNP58_RS14610;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LNP58_RS14610;old_locus_tag=LNP58_14590 NZ_CP086372.1 Protein Homology CDS 3057180 3057989 . - 0 ID=cds-WP_012444318.1;Parent=gene-LNP58_RS14610;Dbxref=Genbank:WP_012444318.1;Name=WP_012444318.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=LNP58_RS14610;product=septum site-determining protein MinD;protein_id=WP_012444318.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3058025 3058765 . - . ID=gene-LNP58_RS14615;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LNP58_RS14615;old_locus_tag=LNP58_14595 NZ_CP086372.1 Protein Homology CDS 3058025 3058765 . - 0 ID=cds-WP_011409235.1;Parent=gene-LNP58_RS14615;Dbxref=Genbank:WP_011409235.1;Name=WP_011409235.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=LNP58_RS14615;product=septum site-determining protein MinC;protein_id=WP_011409235.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3058770 3059366 . - . ID=gene-LNP58_RS14620;Name=LNP58_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14620;old_locus_tag=LNP58_14600 NZ_CP086372.1 Protein Homology CDS 3058770 3059366 . - 0 ID=cds-WP_011259995.1;Parent=gene-LNP58_RS14620;Dbxref=Genbank:WP_011259995.1;Name=WP_011259995.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156556.1;locus_tag=LNP58_RS14620;product=GNAT family N-acetyltransferase;protein_id=WP_011259995.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3059611 3060807 . + . ID=gene-LNP58_RS14625;Name=LNP58_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14625;old_locus_tag=LNP58_14605 NZ_CP086372.1 Protein Homology CDS 3059611 3060807 . + 0 ID=cds-WP_011259994.1;Parent=gene-LNP58_RS14625;Dbxref=Genbank:WP_011259994.1;Name=WP_011259994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171659.1;locus_tag=LNP58_RS14625;product=sensor histidine kinase;protein_id=WP_011259994.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3060807 3061448 . + . ID=gene-LNP58_RS14630;Name=LNP58_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14630;old_locus_tag=LNP58_14610 NZ_CP086372.1 Protein Homology CDS 3060807 3061448 . + 0 ID=cds-WP_010371538.1;Parent=gene-LNP58_RS14630;Dbxref=Genbank:WP_010371538.1;Name=WP_010371538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807809.1;locus_tag=LNP58_RS14630;product=response regulator transcription factor;protein_id=WP_010371538.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3061799 3062980 . + . ID=gene-LNP58_RS14635;Name=LNP58_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14635;old_locus_tag=LNP58_14615 NZ_CP086372.1 Protein Homology CDS 3061799 3062980 . + 0 ID=cds-WP_011259992.1;Parent=gene-LNP58_RS14635;Dbxref=Genbank:WP_011259992.1;Name=WP_011259992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117313.1;locus_tag=LNP58_RS14635;product=SRPBCC family protein;protein_id=WP_011259992.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3063062 3063448 . + . ID=gene-LNP58_RS14640;Name=LNP58_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14640;old_locus_tag=LNP58_14620 NZ_CP086372.1 Protein Homology CDS 3063062 3063448 . + 0 ID=cds-WP_027703302.1;Parent=gene-LNP58_RS14640;Dbxref=Genbank:WP_027703302.1;Name=WP_027703302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259991.1;locus_tag=LNP58_RS14640;product=DUF423 domain-containing protein;protein_id=WP_027703302.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3063451 3064125 . + . ID=gene-LNP58_RS14645;Name=LNP58_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14645;old_locus_tag=LNP58_14625 NZ_CP086372.1 Protein Homology CDS 3063451 3064125 . + 0 ID=cds-WP_011259990.1;Parent=gene-LNP58_RS14645;Dbxref=Genbank:WP_011259990.1;Name=WP_011259990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574704.1;locus_tag=LNP58_RS14645;product=DNA-3-methyladenine glycosylase;protein_id=WP_011259990.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3064189 3064986 . - . ID=gene-LNP58_RS14650;Name=LNP58_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14650;old_locus_tag=LNP58_14630 NZ_CP086372.1 Protein Homology CDS 3064189 3064986 . - 0 ID=cds-WP_069959977.1;Parent=gene-LNP58_RS14650;Dbxref=Genbank:WP_069959977.1;Name=WP_069959977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259989.1;locus_tag=LNP58_RS14650;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_069959977.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3065117 3065296 . - . ID=gene-LNP58_RS14655;Name=LNP58_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14655;old_locus_tag=LNP58_14635 NZ_CP086372.1 Protein Homology CDS 3065117 3065296 . - 0 ID=cds-WP_011259988.1;Parent=gene-LNP58_RS14655;Dbxref=Genbank:WP_011259988.1;Name=WP_011259988.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302659.1;locus_tag=LNP58_RS14655;product=Arc family DNA-binding protein;protein_id=WP_011259988.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3065293 3065577 . - . ID=gene-LNP58_RS14660;Name=LNP58_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14660;old_locus_tag=LNP58_14640 NZ_CP086372.1 Protein Homology CDS 3065293 3065577 . - 0 ID=cds-WP_011259987.1;Parent=gene-LNP58_RS14660;Dbxref=Genbank:WP_011259987.1;Name=WP_011259987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156562.1;locus_tag=LNP58_RS14660;product=hypothetical protein;protein_id=WP_011259987.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3065587 3065994 . - . ID=gene-LNP58_RS14665;Name=LNP58_RS14665;end_range=3065994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14665;old_locus_tag=LNP58_14645;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3065587 3065994 . - 0 ID=cds-LNP58_RS14665;Parent=gene-LNP58_RS14665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3065994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507017.1;locus_tag=LNP58_RS14665;partial=true;product=SPFH domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3066194 3067396 . + . ID=gene-LNP58_RS14670;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LNP58_RS14670;old_locus_tag=LNP58_14650 NZ_CP086372.1 Protein Homology CDS 3066194 3067396 . + 0 ID=cds-WP_048483117.1;Parent=gene-LNP58_RS14670;Dbxref=Genbank:WP_048483117.1;Name=WP_048483117.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472403.1;locus_tag=LNP58_RS14670;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_048483117.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3067596 3067994 . - . ID=gene-LNP58_RS14675;Name=LNP58_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14675;old_locus_tag=LNP58_14655 NZ_CP086372.1 Protein Homology CDS 3067596 3067994 . - 0 ID=cds-WP_143704877.1;Parent=gene-LNP58_RS14675;Dbxref=Genbank:WP_143704877.1;Name=WP_143704877.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=LNP58_RS14675;product=transposase;protein_id=WP_143704877.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3067980 3068150 . - . ID=gene-LNP58_RS14680;Name=LNP58_RS14680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14680;partial=true;pseudo=true;start_range=.,3067980 NZ_CP086372.1 Protein Homology CDS 3067980 3068150 . - 0 ID=cds-LNP58_RS14680;Parent=gene-LNP58_RS14680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=LNP58_RS14680;partial=true;product=transposase;pseudo=true;start_range=.,3067980;transl_table=11 NZ_CP086372.1 RefSeq gene 3068413 3069078 . - . ID=gene-LNP58_RS14685;Name=LNP58_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14685;old_locus_tag=LNP58_14660 NZ_CP086372.1 Protein Homology CDS 3068413 3069078 . - 0 ID=cds-WP_228329761.1;Parent=gene-LNP58_RS14685;Dbxref=Genbank:WP_228329761.1;Name=WP_228329761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502379.1;locus_tag=LNP58_RS14685;product=hypothetical protein;protein_id=WP_228329761.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3069353 3070231 . + . ID=gene-LNP58_RS14690;Name=LNP58_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14690;old_locus_tag=LNP58_14665 NZ_CP086372.1 Protein Homology CDS 3069353 3070231 . + 0 ID=cds-WP_011259982.1;Parent=gene-LNP58_RS14690;Dbxref=Genbank:WP_011259982.1;Name=WP_011259982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801819.1;locus_tag=LNP58_RS14690;product=M15 family metallopeptidase;protein_id=WP_011259982.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3070341 3070601 . + . ID=gene-LNP58_RS14695;Name=LNP58_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14695;old_locus_tag=LNP58_14670 NZ_CP086372.1 Protein Homology CDS 3070341 3070601 . + 0 ID=cds-WP_011409228.1;Parent=gene-LNP58_RS14695;Dbxref=Genbank:WP_011409228.1;Name=WP_011409228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471049.1;locus_tag=LNP58_RS14695;product=PAAR domain-containing protein;protein_id=WP_011409228.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3070661 3072142 . + . ID=gene-LNP58_RS14700;Name=LNP58_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14700;old_locus_tag=LNP58_14675 NZ_CP086372.1 Protein Homology CDS 3070661 3072142 . + 0 ID=cds-WP_059317431.1;Parent=gene-LNP58_RS14700;Dbxref=Genbank:WP_059317431.1;Name=WP_059317431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444329.1;locus_tag=LNP58_RS14700;product=hypothetical protein;protein_id=WP_059317431.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3072158 3075895 . + . ID=gene-LNP58_RS14705;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LNP58_RS14705;old_locus_tag=LNP58_14680 NZ_CP086372.1 Protein Homology CDS 3072158 3075895 . + 0 ID=cds-WP_069964588.1;Parent=gene-LNP58_RS14705;Dbxref=Genbank:WP_069964588.1;Name=WP_069964588.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801812.1;locus_tag=LNP58_RS14705;product=type VI secretion system membrane subunit TssM;protein_id=WP_069964588.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3075892 3076875 . + . ID=gene-LNP58_RS14710;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LNP58_RS14710;old_locus_tag=LNP58_14685 NZ_CP086372.1 Protein Homology CDS 3075892 3076875 . + 0 ID=cds-WP_011259979.1;Parent=gene-LNP58_RS14710;Dbxref=Genbank:WP_011259979.1;Name=WP_011259979.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259979.1;locus_tag=LNP58_RS14710;product=type VI secretion system-associated protein TagF;protein_id=WP_011259979.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3076872 3077702 . + . ID=gene-LNP58_RS14715;Name=LNP58_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14715;old_locus_tag=LNP58_14690 NZ_CP086372.1 Protein Homology CDS 3076872 3077702 . + 0 ID=cds-WP_044756514.1;Parent=gene-LNP58_RS14715;Dbxref=Genbank:WP_044756514.1;Name=WP_044756514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444331.1;locus_tag=LNP58_RS14715;product=OmpA family protein;protein_id=WP_044756514.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3077755 3078828 . - . ID=gene-LNP58_RS14720;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LNP58_RS14720;old_locus_tag=LNP58_14695 NZ_CP086372.1 Protein Homology CDS 3077755 3078828 . - 0 ID=cds-WP_011409224.1;Parent=gene-LNP58_RS14720;Dbxref=Genbank:WP_011409224.1;Name=WP_011409224.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471063.1;locus_tag=LNP58_RS14720;product=type VI secretion system protein TssA;protein_id=WP_011409224.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3079439 3079657 . + . ID=gene-LNP58_RS14725;Name=LNP58_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14725;old_locus_tag=LNP58_14700 NZ_CP086372.1 GeneMarkS-2+ CDS 3079439 3079657 . + 0 ID=cds-WP_228329634.1;Parent=gene-LNP58_RS14725;Dbxref=Genbank:WP_228329634.1;Name=WP_228329634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14725;product=hypothetical protein;protein_id=WP_228329634.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3079778 3082753 . + . ID=gene-LNP58_RS14730;Name=LNP58_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14730;old_locus_tag=LNP58_14705 NZ_CP086372.1 Protein Homology CDS 3079778 3082753 . + 0 ID=cds-WP_228329635.1;Parent=gene-LNP58_RS14730;Dbxref=Genbank:WP_228329635.1;Name=WP_228329635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444332.1;locus_tag=LNP58_RS14730;product=type VI secretion system Vgr family protein;protein_id=WP_228329635.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3082914 3085805 . + . ID=gene-LNP58_RS14735;Name=LNP58_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14735;old_locus_tag=LNP58_14710 NZ_CP086372.1 Protein Homology CDS 3082914 3085805 . + 0 ID=cds-WP_229001897.1;Parent=gene-LNP58_RS14735;Dbxref=Genbank:WP_229001897.1;Name=WP_229001897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444333.1;locus_tag=LNP58_RS14735;product=DNA repair protein;protein_id=WP_229001897.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3085953 3086912 . - . ID=gene-LNP58_RS14740;Name=LNP58_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14740;old_locus_tag=LNP58_14715 NZ_CP086372.1 Protein Homology CDS 3085953 3086912 . - 0 ID=cds-WP_044756518.1;Parent=gene-LNP58_RS14740;Dbxref=Genbank:WP_044756518.1;Name=WP_044756518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444336.1;locus_tag=LNP58_RS14740;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_044756518.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3086971 3087546 . + . ID=gene-LNP58_RS14745;Name=LNP58_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14745;old_locus_tag=LNP58_14720 NZ_CP086372.1 Protein Homology CDS 3086971 3087546 . + 0 ID=cds-WP_044756519.1;Parent=gene-LNP58_RS14745;Dbxref=Genbank:WP_044756519.1;Name=WP_044756519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444337.1;locus_tag=LNP58_RS14745;product=hypothetical protein;protein_id=WP_044756519.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3087603 3088559 . - . ID=gene-LNP58_RS14750;Name=LNP58_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14750;old_locus_tag=LNP58_14725 NZ_CP086372.1 Protein Homology CDS 3087603 3088559 . - 0 ID=cds-WP_059317432.1;Parent=gene-LNP58_RS14750;Dbxref=Genbank:WP_059317432.1;Name=WP_059317432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444336.1;locus_tag=LNP58_RS14750;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_059317432.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3088979 3091408 . + . ID=gene-LNP58_RS14755;Name=LNP58_RS14755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14755;old_locus_tag=LNP58_14730;partial=true;pseudo=true;start_range=.,3088979 NZ_CP086372.1 Protein Homology CDS 3088979 3091408 . + 0 ID=cds-LNP58_RS14755;Parent=gene-LNP58_RS14755;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264699.1;locus_tag=LNP58_RS14755;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,3088979;transl_table=11 NZ_CP086372.1 RefSeq gene 3091423 3092304 . + . ID=gene-LNP58_RS14760;Name=LNP58_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14760;old_locus_tag=LNP58_14735 NZ_CP086372.1 Protein Homology CDS 3091423 3092304 . + 0 ID=cds-WP_229001898.1;Parent=gene-LNP58_RS14760;Dbxref=Genbank:WP_229001898.1;Name=WP_229001898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801745.1;locus_tag=LNP58_RS14760;product=DUF4123 domain-containing protein;protein_id=WP_229001898.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3092301 3092765 . + . ID=gene-LNP58_RS14765;Name=LNP58_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14765;old_locus_tag=LNP58_14740 NZ_CP086372.1 Protein Homology CDS 3092301 3092765 . + 0 ID=cds-WP_011409220.1;Parent=gene-LNP58_RS14765;Dbxref=Genbank:WP_011409220.1;Name=WP_011409220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=LNP58_RS14765;product=DUF3304 domain-containing protein;protein_id=WP_011409220.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3092789 3093268 . + . ID=gene-LNP58_RS14770;Name=LNP58_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14770;old_locus_tag=LNP58_14745 NZ_CP086372.1 Protein Homology CDS 3092789 3093268 . + 0 ID=cds-WP_011409219.1;Parent=gene-LNP58_RS14770;Dbxref=Genbank:WP_011409219.1;Name=WP_011409219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409219.1;locus_tag=LNP58_RS14770;product=DUF3304 domain-containing protein;protein_id=WP_011409219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3093265 3093588 . + . ID=gene-LNP58_RS14775;Name=LNP58_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14775;old_locus_tag=LNP58_14750 NZ_CP086372.1 GeneMarkS-2+ CDS 3093265 3093588 . + 0 ID=cds-WP_048485619.1;Parent=gene-LNP58_RS14775;Dbxref=Genbank:WP_048485619.1;Name=WP_048485619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14775;product=hypothetical protein;protein_id=WP_048485619.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3093585 3094049 . + . ID=gene-LNP58_RS14780;Name=LNP58_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14780;old_locus_tag=LNP58_14755 NZ_CP086372.1 Protein Homology CDS 3093585 3094049 . + 0 ID=cds-WP_011259972.1;Parent=gene-LNP58_RS14780;Dbxref=Genbank:WP_011259972.1;Name=WP_011259972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=LNP58_RS14780;product=DUF3304 domain-containing protein;protein_id=WP_011259972.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3094073 3094552 . + . ID=gene-LNP58_RS14785;Name=LNP58_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14785;old_locus_tag=LNP58_14760 NZ_CP086372.1 Protein Homology CDS 3094073 3094552 . + 0 ID=cds-WP_011409218.1;Parent=gene-LNP58_RS14785;Dbxref=Genbank:WP_011409218.1;Name=WP_011409218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409219.1;locus_tag=LNP58_RS14785;product=DUF3304 domain-containing protein;protein_id=WP_011409218.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3094549 3095043 . + . ID=gene-LNP58_RS14790;Name=LNP58_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14790;old_locus_tag=LNP58_14765 NZ_CP086372.1 Protein Homology CDS 3094549 3095043 . + 0 ID=cds-WP_219724822.1;Parent=gene-LNP58_RS14790;Dbxref=Genbank:WP_219724822.1;Name=WP_219724822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021508.2;locus_tag=LNP58_RS14790;product=DUF2235 domain-containing protein;protein_id=WP_219724822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3095088 3096323 . + . ID=gene-LNP58_RS14795;Name=LNP58_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14795;old_locus_tag=LNP58_14770 NZ_CP086372.1 Protein Homology CDS 3095088 3096323 . + 0 ID=cds-WP_011409439.1;Parent=gene-LNP58_RS14795;Dbxref=Genbank:WP_011409439.1;Name=WP_011409439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS14795;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011409439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3096304 3097701 . + . ID=gene-LNP58_RS14800;Name=LNP58_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14800;old_locus_tag=LNP58_14775 NZ_CP086372.1 Protein Homology CDS 3096304 3097701 . + 0 ID=cds-WP_228329637.1;Parent=gene-LNP58_RS14800;Dbxref=Genbank:WP_228329637.1;Name=WP_228329637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409217.1;locus_tag=LNP58_RS14800;product=DUF2235 domain-containing protein;protein_id=WP_228329637.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3097724 3098328 . + . ID=gene-LNP58_RS14805;Name=LNP58_RS14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14805;old_locus_tag=LNP58_14780;partial=true;pseudo=true;start_range=.,3097724 NZ_CP086372.1 Protein Homology CDS 3097724 3098328 . + 0 ID=cds-LNP58_RS14805;Parent=gene-LNP58_RS14805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444332.1;locus_tag=LNP58_RS14805;partial=true;product=DUF2345 domain-containing protein;pseudo=true;start_range=.,3097724;transl_table=11 NZ_CP086372.1 RefSeq gene 3098489 3101380 . + . ID=gene-LNP58_RS14810;Name=LNP58_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14810;old_locus_tag=LNP58_14785 NZ_CP086372.1 Protein Homology CDS 3098489 3101380 . + 0 ID=cds-WP_229001899.1;Parent=gene-LNP58_RS14810;Dbxref=Genbank:WP_229001899.1;Name=WP_229001899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444333.1;locus_tag=LNP58_RS14810;product=DNA repair protein;protein_id=WP_229001899.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3101433 3102395 . - . ID=gene-LNP58_RS14815;Name=LNP58_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14815;old_locus_tag=LNP58_14790 NZ_CP086372.1 Protein Homology CDS 3101433 3102395 . - 0 ID=cds-WP_011409215.1;Parent=gene-LNP58_RS14815;Dbxref=Genbank:WP_011409215.1;Name=WP_011409215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444336.1;locus_tag=LNP58_RS14815;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_011409215.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3102581 3105250 . + . ID=gene-LNP58_RS14820;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LNP58_RS14820;old_locus_tag=LNP58_14795 NZ_CP086372.1 Protein Homology CDS 3102581 3105250 . + 0 ID=cds-WP_228329639.1;Parent=gene-LNP58_RS14820;Dbxref=Genbank:WP_228329639.1;Name=WP_228329639.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409214.1;locus_tag=LNP58_RS14820;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_228329639.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3105256 3106071 . + . ID=gene-LNP58_RS14825;Name=LNP58_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14825;old_locus_tag=LNP58_14800 NZ_CP086372.1 Protein Homology CDS 3105256 3106071 . + 0 ID=cds-WP_228329640.1;Parent=gene-LNP58_RS14825;Dbxref=Genbank:WP_228329640.1;Name=WP_228329640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009604057.1;locus_tag=LNP58_RS14825;product=DUF4123 domain-containing protein;protein_id=WP_228329640.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3106064 3106660 . + . ID=gene-LNP58_RS14830;Name=LNP58_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14830;old_locus_tag=LNP58_14805 NZ_CP086372.1 Protein Homology CDS 3106064 3106660 . + 0 ID=cds-WP_011409212.1;Parent=gene-LNP58_RS14830;Dbxref=Genbank:WP_011409212.1;Name=WP_011409212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409212.1;locus_tag=LNP58_RS14830;product=DUF3304 domain-containing protein;protein_id=WP_011409212.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3106660 3108891 . + . ID=gene-LNP58_RS14835;Name=LNP58_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14835;old_locus_tag=LNP58_14810 NZ_CP086372.1 Protein Homology CDS 3106660 3108891 . + 0 ID=cds-WP_011409211.1;Parent=gene-LNP58_RS14835;Dbxref=Genbank:WP_011409211.1;Name=WP_011409211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009604062.1;locus_tag=LNP58_RS14835;product=DUF2235 domain-containing protein;protein_id=WP_011409211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3108872 3109261 . + . ID=gene-LNP58_RS14840;Name=LNP58_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14840;old_locus_tag=LNP58_14815 NZ_CP086372.1 Protein Homology CDS 3108872 3109261 . + 0 ID=cds-WP_011259961.1;Parent=gene-LNP58_RS14840;Dbxref=Genbank:WP_011259961.1;Name=WP_011259961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259961.1;locus_tag=LNP58_RS14840;product=DUF2345 domain-containing protein;protein_id=WP_011259961.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3109296 3111635 . - . ID=gene-LNP58_RS14845;Name=LNP58_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14845;old_locus_tag=LNP58_14820 NZ_CP086372.1 Protein Homology CDS 3109296 3111635 . - 0 ID=cds-WP_082323408.1;Parent=gene-LNP58_RS14845;Dbxref=Genbank:WP_082323408.1;Name=WP_082323408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259949.1;locus_tag=LNP58_RS14845;product=type VI secretion system Vgr family protein;protein_id=WP_082323408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3111646 3112437 . - . ID=gene-LNP58_RS14850;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LNP58_RS14850;old_locus_tag=LNP58_14825 NZ_CP086372.1 Protein Homology CDS 3111646 3112437 . - 0 ID=cds-WP_178383471.1;Parent=gene-LNP58_RS14850;Dbxref=Genbank:WP_178383471.1;Name=WP_178383471.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304316.1;locus_tag=LNP58_RS14850;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_178383471.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3112434 3113372 . - . ID=gene-LNP58_RS14855;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LNP58_RS14855;old_locus_tag=LNP58_14830 NZ_CP086372.1 Protein Homology CDS 3112434 3113372 . - 0 ID=cds-WP_229001946.1;Parent=gene-LNP58_RS14855;Dbxref=Genbank:WP_229001946.1;Name=WP_229001946.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03353.2;locus_tag=LNP58_RS14855;product=type VI secretion system baseplate subunit TssK;protein_id=WP_229001946.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3113419 3114498 . - . ID=gene-LNP58_RS14860;Name=LNP58_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14860;old_locus_tag=LNP58_14835 NZ_CP086372.1 Protein Homology CDS 3113419 3114498 . - 0 ID=cds-WP_069959972.1;Parent=gene-LNP58_RS14860;Dbxref=Genbank:WP_069959972.1;Name=WP_069959972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=LNP58_RS14860;product=Imm71 family immunity protein;protein_id=WP_069959972.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3114495 3114800 . - . ID=gene-LNP58_RS14865;Name=LNP58_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14865;old_locus_tag=LNP58_14840 NZ_CP086372.1 Protein Homology CDS 3114495 3114800 . - 0 ID=cds-WP_069959971.1;Parent=gene-LNP58_RS14865;Dbxref=Genbank:WP_069959971.1;Name=WP_069959971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812779.1;locus_tag=LNP58_RS14865;product=hypothetical protein;protein_id=WP_069959971.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3114909 3115454 . - . ID=gene-LNP58_RS14870;Name=LNP58_RS14870;end_range=3115454,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14870;old_locus_tag=LNP58_14845;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3114909 3115454 . - 0 ID=cds-LNP58_RS14870;Parent=gene-LNP58_RS14870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3115454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=LNP58_RS14870;partial=true;product=Imm72 family immunity protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3115475 3116689 . - . ID=gene-LNP58_RS14875;Name=LNP58_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14875;old_locus_tag=LNP58_14850 NZ_CP086372.1 Protein Homology CDS 3115475 3116689 . - 0 ID=cds-WP_041182240.1;Parent=gene-LNP58_RS14875;Dbxref=Genbank:WP_041182240.1;Name=WP_041182240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS14875;product=IS4-like element ISXo14 family transposase;protein_id=WP_041182240.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3116806 3117348 . - . ID=gene-LNP58_RS14880;Name=LNP58_RS14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS14880;old_locus_tag=LNP58_14855;partial=true;pseudo=true;start_range=.,3116806 NZ_CP086372.1 Protein Homology CDS 3116806 3117348 . - 0 ID=cds-LNP58_RS14880;Parent=gene-LNP58_RS14880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=LNP58_RS14880;partial=true;product=Imm71 family immunity protein;pseudo=true;start_range=.,3116806;transl_table=11 NZ_CP086372.1 RefSeq gene 3117345 3117746 . - . ID=gene-LNP58_RS14885;Name=LNP58_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14885;old_locus_tag=LNP58_14860 NZ_CP086372.1 Protein Homology CDS 3117345 3117746 . - 0 ID=cds-WP_228329641.1;Parent=gene-LNP58_RS14885;Dbxref=Genbank:WP_228329641.1;Name=WP_228329641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812779.1;locus_tag=LNP58_RS14885;product=hypothetical protein;protein_id=WP_228329641.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3117962 3118930 . - . ID=gene-LNP58_RS14890;Name=LNP58_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14890;old_locus_tag=LNP58_14865 NZ_CP086372.1 Protein Homology CDS 3117962 3118930 . - 0 ID=cds-WP_011258803.1-5;Parent=gene-LNP58_RS14890;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS14890;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3118982 3119989 . - . ID=gene-LNP58_RS14895;Name=LNP58_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14895;old_locus_tag=LNP58_14870 NZ_CP086372.1 GeneMarkS-2+ CDS 3118982 3119989 . - 0 ID=cds-WP_228329642.1;Parent=gene-LNP58_RS14895;Dbxref=Genbank:WP_228329642.1;Name=WP_228329642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14895;product=hypothetical protein;protein_id=WP_228329642.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3120049 3122301 . - . ID=gene-LNP58_RS14900;Name=LNP58_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14900;old_locus_tag=LNP58_14875 NZ_CP086372.1 Protein Homology CDS 3120049 3122301 . - 0 ID=cds-WP_082323406.1;Parent=gene-LNP58_RS14900;Dbxref=Genbank:WP_082323406.1;Name=WP_082323406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264661.1;locus_tag=LNP58_RS14900;product=type VI secretion system Vgr family protein;protein_id=WP_082323406.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3122343 3122888 . - . ID=gene-LNP58_RS14905;Name=LNP58_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14905;old_locus_tag=LNP58_14880 NZ_CP086372.1 GeneMarkS-2+ CDS 3122343 3122888 . - 0 ID=cds-WP_128415298.1;Parent=gene-LNP58_RS14905;Dbxref=Genbank:WP_128415298.1;Name=WP_128415298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14905;product=hypothetical protein;protein_id=WP_128415298.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3122863 3125109 . - . ID=gene-LNP58_RS14910;Name=LNP58_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14910;old_locus_tag=LNP58_14885 NZ_CP086372.1 Protein Homology CDS 3122863 3125109 . - 0 ID=cds-WP_229001900.1;Parent=gene-LNP58_RS14910;Dbxref=Genbank:WP_229001900.1;Name=WP_229001900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259952.1;locus_tag=LNP58_RS14910;product=M23 family metallopeptidase;protein_id=WP_229001900.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3125122 3127287 . - . ID=gene-LNP58_RS14915;Name=LNP58_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14915;old_locus_tag=LNP58_14890 NZ_CP086372.1 Protein Homology CDS 3125122 3127287 . - 0 ID=cds-WP_228329644.1;Parent=gene-LNP58_RS14915;Dbxref=Genbank:WP_228329644.1;Name=WP_228329644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259949.1;locus_tag=LNP58_RS14915;product=type VI secretion system Vgr family protein;protein_id=WP_228329644.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3127296 3127871 . - . ID=gene-LNP58_RS14920;Name=LNP58_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14920;old_locus_tag=LNP58_14895 NZ_CP086372.1 GeneMarkS-2+ CDS 3127296 3127871 . - 0 ID=cds-WP_125168764.1;Parent=gene-LNP58_RS14920;Dbxref=Genbank:WP_125168764.1;Name=WP_125168764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14920;product=hypothetical protein;protein_id=WP_125168764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3127846 3128823 . - . ID=gene-LNP58_RS14925;Name=LNP58_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14925;old_locus_tag=LNP58_14900 NZ_CP086372.1 GeneMarkS-2+ CDS 3127846 3128823 . - 0 ID=cds-WP_075242365.1;Parent=gene-LNP58_RS14925;Dbxref=Genbank:WP_075242365.1;Name=WP_075242365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14925;product=hypothetical protein;protein_id=WP_075242365.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3128820 3131096 . - . ID=gene-LNP58_RS14930;Name=LNP58_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14930;old_locus_tag=LNP58_14905 NZ_CP086372.1 Protein Homology CDS 3128820 3131096 . - 0 ID=cds-WP_229001901.1;Parent=gene-LNP58_RS14930;Dbxref=Genbank:WP_229001901.1;Name=WP_229001901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409209.1;locus_tag=LNP58_RS14930;product=type VI secretion system Vgr family protein;protein_id=WP_229001901.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3131298 3131891 . - . ID=gene-LNP58_RS14935;Name=LNP58_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14935;old_locus_tag=LNP58_14910 NZ_CP086372.1 GeneMarkS-2+ CDS 3131298 3131891 . - 0 ID=cds-WP_143700010.1;Parent=gene-LNP58_RS14935;Dbxref=Genbank:WP_143700010.1;Name=WP_143700010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14935;product=hypothetical protein;protein_id=WP_143700010.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3132212 3132814 . - . ID=gene-LNP58_RS14940;Name=LNP58_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14940;old_locus_tag=LNP58_14915 NZ_CP086372.1 GeneMarkS-2+ CDS 3132212 3132814 . - 0 ID=cds-WP_133260575.1;Parent=gene-LNP58_RS14940;Dbxref=Genbank:WP_133260575.1;Name=WP_133260575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS14940;product=hypothetical protein;protein_id=WP_133260575.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3132811 3134979 . - . ID=gene-LNP58_RS14945;Name=LNP58_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14945;old_locus_tag=LNP58_14920 NZ_CP086372.1 Protein Homology CDS 3132811 3134979 . - 0 ID=cds-WP_075242360.1;Parent=gene-LNP58_RS14945;Dbxref=Genbank:WP_075242360.1;Name=WP_075242360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=LNP58_RS14945;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_075242360.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3134984 3137518 . - . ID=gene-LNP58_RS14950;Name=LNP58_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14950;old_locus_tag=LNP58_14925 NZ_CP086372.1 Protein Homology CDS 3134984 3137518 . - 0 ID=cds-WP_228329645.1;Parent=gene-LNP58_RS14950;Dbxref=Genbank:WP_228329645.1;Name=WP_228329645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264661.1;locus_tag=LNP58_RS14950;product=type VI secretion system Vgr family protein;protein_id=WP_228329645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3137529 3138320 . - . ID=gene-LNP58_RS14955;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LNP58_RS14955;old_locus_tag=LNP58_14930 NZ_CP086372.1 Protein Homology CDS 3137529 3138320 . - 0 ID=cds-WP_014502417.1;Parent=gene-LNP58_RS14955;Dbxref=Genbank:WP_014502417.1;Name=WP_014502417.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304316.1;locus_tag=LNP58_RS14955;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_014502417.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3138317 3139255 . - . ID=gene-LNP58_RS14960;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LNP58_RS14960;old_locus_tag=LNP58_14935 NZ_CP086372.1 Protein Homology CDS 3138317 3139255 . - 0 ID=cds-WP_229001946.1-2;Parent=gene-LNP58_RS14960;Dbxref=Genbank:WP_229001946.1;Name=WP_229001946.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03353.2;locus_tag=LNP58_RS14960;product=type VI secretion system baseplate subunit TssK;protein_id=WP_229001946.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3139302 3140381 . - . ID=gene-LNP58_RS14965;Name=LNP58_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14965;old_locus_tag=LNP58_14940 NZ_CP086372.1 Protein Homology CDS 3139302 3140381 . - 0 ID=cds-WP_075243562.1;Parent=gene-LNP58_RS14965;Dbxref=Genbank:WP_075243562.1;Name=WP_075243562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=LNP58_RS14965;product=Imm71 family immunity protein;protein_id=WP_075243562.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3140378 3141784 . - . ID=gene-LNP58_RS14970;Name=LNP58_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14970;old_locus_tag=LNP58_14945 NZ_CP086372.1 Protein Homology CDS 3140378 3141784 . - 0 ID=cds-WP_228329646.1;Parent=gene-LNP58_RS14970;Dbxref=Genbank:WP_228329646.1;Name=WP_228329646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502402.1;locus_tag=LNP58_RS14970;product=hypothetical protein;protein_id=WP_228329646.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3141925 3144753 . - . ID=gene-LNP58_RS14975;Name=LNP58_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14975;old_locus_tag=LNP58_14950 NZ_CP086372.1 Protein Homology CDS 3141925 3144753 . - 0 ID=cds-WP_228329647.1;Parent=gene-LNP58_RS14975;Dbxref=Genbank:WP_228329647.1;Name=WP_228329647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264661.1;locus_tag=LNP58_RS14975;product=type VI secretion system Vgr family protein;protein_id=WP_228329647.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3144764 3145555 . - . ID=gene-LNP58_RS14980;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LNP58_RS14980;old_locus_tag=LNP58_14955 NZ_CP086372.1 Protein Homology CDS 3144764 3145555 . - 0 ID=cds-WP_014502417.1-2;Parent=gene-LNP58_RS14980;Dbxref=Genbank:WP_014502417.1;Name=WP_014502417.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304316.1;locus_tag=LNP58_RS14980;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_014502417.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3145552 3146886 . - . ID=gene-LNP58_RS14985;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LNP58_RS14985;old_locus_tag=LNP58_14960 NZ_CP086372.1 Protein Homology CDS 3145552 3146886 . - 0 ID=cds-WP_011259947.1;Parent=gene-LNP58_RS14985;Dbxref=Genbank:WP_011259947.1;Name=WP_011259947.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812677.1;locus_tag=LNP58_RS14985;product=type VI secretion system baseplate subunit TssK;protein_id=WP_011259947.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3147038 3147646 . - . ID=gene-LNP58_RS14990;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LNP58_RS14990;old_locus_tag=LNP58_14965 NZ_CP086372.1 Protein Homology CDS 3147038 3147646 . - 0 ID=cds-WP_044750743.1;Parent=gene-LNP58_RS14990;Dbxref=Genbank:WP_044750743.1;Name=WP_044750743.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302181.1;locus_tag=LNP58_RS14990;product=type VI secretion system lipoprotein TssJ;protein_id=WP_044750743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3148033 3148521 . + . ID=gene-LNP58_RS14995;Name=LNP58_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS14995;old_locus_tag=LNP58_14970 NZ_CP086372.1 Protein Homology CDS 3148033 3148521 . + 0 ID=cds-WP_033005590.1;Parent=gene-LNP58_RS14995;Dbxref=Genbank:WP_033005590.1;Name=WP_033005590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445672.1;locus_tag=LNP58_RS14995;product=hypothetical protein;protein_id=WP_033005590.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3148568 3149068 . + . ID=gene-LNP58_RS15000;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LNP58_RS15000;old_locus_tag=LNP58_14975 NZ_CP086372.1 Protein Homology CDS 3148568 3149068 . + 0 ID=cds-WP_003467601.1;Parent=gene-LNP58_RS15000;Dbxref=Genbank:WP_003467601.1;Name=WP_003467601.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304314.1;locus_tag=LNP58_RS15000;product=type VI secretion system contractile sheath small subunit;protein_id=WP_003467601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3149072 3150568 . + . ID=gene-LNP58_RS15005;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LNP58_RS15005;old_locus_tag=LNP58_14980 NZ_CP086372.1 Protein Homology CDS 3149072 3150568 . + 0 ID=cds-WP_014502419.1;Parent=gene-LNP58_RS15005;Dbxref=Genbank:WP_014502419.1;Name=WP_014502419.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302184.1;locus_tag=LNP58_RS15005;product=type VI secretion system contractile sheath large subunit;protein_id=WP_014502419.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3150710 3151207 . + . ID=gene-LNP58_RS15010;Name=LNP58_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15010;old_locus_tag=LNP58_14985 NZ_CP086372.1 Protein Homology CDS 3150710 3151207 . + 0 ID=cds-WP_003467612.1;Parent=gene-LNP58_RS15010;Dbxref=Genbank:WP_003467612.1;Name=WP_003467612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006465355.1;locus_tag=LNP58_RS15010;product=type VI secretion system tube protein Hcp;protein_id=WP_003467612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3151355 3151843 . + . ID=gene-LNP58_RS15015;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LNP58_RS15015;old_locus_tag=LNP58_14990 NZ_CP086372.1 Protein Homology CDS 3151355 3151843 . + 0 ID=cds-WP_011259942.1;Parent=gene-LNP58_RS15015;Dbxref=Genbank:WP_011259942.1;Name=WP_011259942.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302186.1;locus_tag=LNP58_RS15015;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011259942.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3151846 3153681 . + . ID=gene-LNP58_RS15020;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LNP58_RS15020;old_locus_tag=LNP58_14995 NZ_CP086372.1 Protein Homology CDS 3151846 3153681 . + 0 ID=cds-WP_014502420.1;Parent=gene-LNP58_RS15020;Dbxref=Genbank:WP_014502420.1;Name=WP_014502420.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812662.1;locus_tag=LNP58_RS15020;product=type VI secretion system baseplate subunit TssF;protein_id=WP_014502420.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3153645 3154736 . + . ID=gene-LNP58_RS15025;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LNP58_RS15025;old_locus_tag=LNP58_15000 NZ_CP086372.1 Protein Homology CDS 3153645 3154736 . + 0 ID=cds-WP_014502421.1;Parent=gene-LNP58_RS15025;Dbxref=Genbank:WP_014502421.1;Name=WP_014502421.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302188.1;locus_tag=LNP58_RS15025;product=type VI secretion system baseplate subunit TssG;protein_id=WP_014502421.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3154822 3157554 . + . ID=gene-LNP58_RS15030;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LNP58_RS15030;old_locus_tag=LNP58_15005 NZ_CP086372.1 Protein Homology CDS 3154822 3157554 . + 0 ID=cds-WP_075242256.1;Parent=gene-LNP58_RS15030;Dbxref=Genbank:WP_075242256.1;Name=WP_075242256.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445669.1;locus_tag=LNP58_RS15030;product=type VI secretion system ATPase TssH;protein_id=WP_075242256.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3157585 3157938 . + . ID=gene-LNP58_RS15035;Name=LNP58_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15035;old_locus_tag=LNP58_15010 NZ_CP086372.1 Protein Homology CDS 3157585 3157938 . + 0 ID=cds-WP_014502423.1;Parent=gene-LNP58_RS15035;Dbxref=Genbank:WP_014502423.1;Name=WP_014502423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303308.1;locus_tag=LNP58_RS15035;product=hypothetical protein;protein_id=WP_014502423.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3158031 3160790 . + . ID=gene-LNP58_RS15040;Name=LNP58_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15040;old_locus_tag=LNP58_15015 NZ_CP086372.1 Protein Homology CDS 3158031 3160790 . + 0 ID=cds-WP_075242942.1;Parent=gene-LNP58_RS15040;Dbxref=Genbank:WP_075242942.1;Name=WP_075242942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503453.1;locus_tag=LNP58_RS15040;product=type VI secretion system Vgr family protein;protein_id=WP_075242942.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3160981 3161637 . + . ID=gene-LNP58_RS15045;Name=LNP58_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15045;old_locus_tag=LNP58_15020 NZ_CP086372.1 Protein Homology CDS 3160981 3161637 . + 0 ID=cds-WP_228329650.1;Parent=gene-LNP58_RS15045;Dbxref=Genbank:WP_228329650.1;Name=WP_228329650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.2;locus_tag=LNP58_RS15045;product=DUF4123 domain-containing protein;protein_id=WP_228329650.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3161656 3164514 . + . ID=gene-LNP58_RS15050;Name=LNP58_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15050;old_locus_tag=LNP58_15025 NZ_CP086372.1 Protein Homology CDS 3161656 3164514 . + 0 ID=cds-WP_228329651.1;Parent=gene-LNP58_RS15050;Dbxref=Genbank:WP_228329651.1;Name=WP_228329651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445666.1;locus_tag=LNP58_RS15050;product=hypothetical protein;protein_id=WP_228329651.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3164523 3165554 . + . ID=gene-LNP58_RS15055;Name=LNP58_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15055;old_locus_tag=LNP58_15030 NZ_CP086372.1 Protein Homology CDS 3164523 3165554 . + 0 ID=cds-WP_069959960.1;Parent=gene-LNP58_RS15055;Dbxref=Genbank:WP_069959960.1;Name=WP_069959960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=LNP58_RS15055;product=hypothetical protein;protein_id=WP_069959960.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3165556 3168054 . + . ID=gene-LNP58_RS15060;Name=LNP58_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15060;old_locus_tag=LNP58_15035 NZ_CP086372.1 Protein Homology CDS 3165556 3168054 . + 0 ID=cds-WP_228329652.1;Parent=gene-LNP58_RS15060;Dbxref=Genbank:WP_228329652.1;Name=WP_228329652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409199.1;locus_tag=LNP58_RS15060;product=hypothetical protein;protein_id=WP_228329652.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3168058 3169083 . + . ID=gene-LNP58_RS15065;Name=LNP58_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15065;old_locus_tag=LNP58_15040 NZ_CP086372.1 Protein Homology CDS 3168058 3169083 . + 0 ID=cds-WP_228329653.1;Parent=gene-LNP58_RS15065;Dbxref=Genbank:WP_228329653.1;Name=WP_228329653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=LNP58_RS15065;product=hypothetical protein;protein_id=WP_228329653.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3169085 3170938 . + . ID=gene-LNP58_RS15070;Name=LNP58_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15070;old_locus_tag=LNP58_15045 NZ_CP086372.1 GeneMarkS-2+ CDS 3169085 3170938 . + 0 ID=cds-WP_228329654.1;Parent=gene-LNP58_RS15070;Dbxref=Genbank:WP_228329654.1;Name=WP_228329654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15070;product=hypothetical protein;protein_id=WP_228329654.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3170950 3171966 . + . ID=gene-LNP58_RS15075;Name=LNP58_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15075;old_locus_tag=LNP58_15050 NZ_CP086372.1 Protein Homology CDS 3170950 3171966 . + 0 ID=cds-WP_069964582.1;Parent=gene-LNP58_RS15075;Dbxref=Genbank:WP_069964582.1;Name=WP_069964582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=LNP58_RS15075;product=hypothetical protein;protein_id=WP_069964582.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3172488 3173015 . - . ID=gene-LNP58_RS15080;Name=LNP58_RS15080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15080;old_locus_tag=LNP58_15055;partial=true;pseudo=true;start_range=.,3172488 NZ_CP086372.1 Protein Homology CDS 3172488 3173015 . - 0 ID=cds-LNP58_RS15080;Parent=gene-LNP58_RS15080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503453.1;locus_tag=LNP58_RS15080;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,3172488;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3173172 3173297 . + . ID=gene-LNP58_RS15085;Name=LNP58_RS15085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15085;old_locus_tag=LNP58_15060;partial=true;pseudo=true;start_range=.,3173172 NZ_CP086372.1 Protein Homology CDS 3173172 3173297 . + 0 ID=cds-LNP58_RS15085;Parent=gene-LNP58_RS15085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611589.1;locus_tag=LNP58_RS15085;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,3173172;transl_table=11 NZ_CP086372.1 RefSeq gene 3173359 3173435 . + . ID=gene-LNP58_RS15090;Name=LNP58_RS15090;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15090;old_locus_tag=LNP58_15065 NZ_CP086372.1 cmsearch ncRNA 3173359 3173435 . + . ID=rna-LNP58_RS15090;Parent=gene-LNP58_RS15090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15090;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3173359 3173435 . + . ID=exon-LNP58_RS15090-1;Parent=rna-LNP58_RS15090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15090;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3173738 3174001 . + . ID=gene-LNP58_RS15095;Name=LNP58_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15095;old_locus_tag=LNP58_15070 NZ_CP086372.1 Protein Homology CDS 3173738 3174001 . + 0 ID=cds-WP_011259930.1;Parent=gene-LNP58_RS15095;Dbxref=Genbank:WP_011259930.1;Name=WP_011259930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479855.1;locus_tag=LNP58_RS15095;product=hypothetical protein;protein_id=WP_011259930.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3174008 3174316 . + . ID=gene-LNP58_RS15100;Name=LNP58_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15100;old_locus_tag=LNP58_15075 NZ_CP086372.1 Protein Homology CDS 3174008 3174316 . + 0 ID=cds-WP_011259929.1;Parent=gene-LNP58_RS15100;Dbxref=Genbank:WP_011259929.1;Name=WP_011259929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259929.1;locus_tag=LNP58_RS15100;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011259929.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3174350 3175816 . - . ID=gene-LNP58_RS15105;Name=LNP58_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15105;old_locus_tag=LNP58_15080 NZ_CP086372.1 Protein Homology CDS 3174350 3175816 . - 0 ID=cds-WP_228329655.1;Parent=gene-LNP58_RS15105;Dbxref=Genbank:WP_228329655.1;Name=WP_228329655.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376176.1;locus_tag=LNP58_RS15105;product=restriction endonuclease subunit S;protein_id=WP_228329655.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3175809 3177353 . - . ID=gene-LNP58_RS15110;Name=LNP58_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15110;old_locus_tag=LNP58_15085 NZ_CP086372.1 Protein Homology CDS 3175809 3177353 . - 0 ID=cds-WP_069964581.1;Parent=gene-LNP58_RS15110;Dbxref=Genbank:WP_069964581.1;Name=WP_069964581.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502302.1;locus_tag=LNP58_RS15110;product=N-6 DNA methylase;protein_id=WP_069964581.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3177400 3178398 . - . ID=gene-LNP58_RS15115;Name=LNP58_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15115;old_locus_tag=LNP58_15090 NZ_CP086372.1 Protein Homology CDS 3177400 3178398 . - 0 ID=cds-WP_069964580.1;Parent=gene-LNP58_RS15115;Dbxref=Genbank:WP_069964580.1;Name=WP_069964580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409184.1;locus_tag=LNP58_RS15115;product=Abi family protein;protein_id=WP_069964580.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3178538 3182011 . - . ID=gene-LNP58_RS15120;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=LNP58_RS15120;old_locus_tag=LNP58_15095 NZ_CP086372.1 Protein Homology CDS 3178538 3182011 . - 0 ID=cds-WP_069959957.1;Parent=gene-LNP58_RS15120;Dbxref=Genbank:WP_069959957.1;Name=WP_069959957.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930478.1;locus_tag=LNP58_RS15120;product=type I restriction-modification system endonuclease;protein_id=WP_069959957.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3182321 3182585 . + . ID=gene-LNP58_RS15125;Name=LNP58_RS15125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15125;old_locus_tag=LNP58_15100;pseudo=true NZ_CP086372.1 Protein Homology CDS 3182321 3182585 . + 0 ID=cds-LNP58_RS15125;Parent=gene-LNP58_RS15125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479855.1;locus_tag=LNP58_RS15125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3182592 3182900 . + . ID=gene-LNP58_RS15130;Name=LNP58_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15130;old_locus_tag=LNP58_15105 NZ_CP086372.1 Protein Homology CDS 3182592 3182900 . + 0 ID=cds-WP_044756557.1;Parent=gene-LNP58_RS15130;Dbxref=Genbank:WP_044756557.1;Name=WP_044756557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903357.1;locus_tag=LNP58_RS15130;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_044756557.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3182881 3183945 . + . ID=gene-LNP58_RS15135;Name=LNP58_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15135;old_locus_tag=LNP58_15110 NZ_CP086372.1 Protein Homology CDS 3182881 3183945 . + 0 ID=cds-WP_011259922.1;Parent=gene-LNP58_RS15135;Dbxref=Genbank:WP_011259922.1;Name=WP_011259922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903356.1;locus_tag=LNP58_RS15135;product=restriction endonuclease;protein_id=WP_011259922.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3184308 3185777 . + . ID=gene-LNP58_RS15140;Name=LNP58_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15140;old_locus_tag=LNP58_15115 NZ_CP086372.1 Protein Homology CDS 3184308 3185777 . + 0 ID=cds-WP_229001947.1;Parent=gene-LNP58_RS15140;Dbxref=Genbank:WP_229001947.1;Name=WP_229001947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019397174.1;locus_tag=LNP58_RS15140;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_229001947.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3185788 3186222 . + . ID=gene-LNP58_RS15145;Name=LNP58_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15145;old_locus_tag=LNP58_15120 NZ_CP086372.1 Protein Homology CDS 3185788 3186222 . + 0 ID=cds-WP_011409179.1;Parent=gene-LNP58_RS15145;Dbxref=Genbank:WP_011409179.1;Name=WP_011409179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409179.1;locus_tag=LNP58_RS15145;product=nucleotidyltransferase substrate binding protein;protein_id=WP_011409179.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3186215 3187726 . + . ID=gene-LNP58_RS15150;Name=LNP58_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15150;old_locus_tag=LNP58_15125 NZ_CP086372.1 Protein Homology CDS 3186215 3187726 . + 0 ID=cds-WP_075242182.1;Parent=gene-LNP58_RS15150;Dbxref=Genbank:WP_075242182.1;Name=WP_075242182.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903352.1;locus_tag=LNP58_RS15150;product=restriction endonuclease subunit S;protein_id=WP_075242182.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3187723 3188469 . + . ID=gene-LNP58_RS15155;Name=LNP58_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15155;old_locus_tag=LNP58_15130 NZ_CP086372.1 Protein Homology CDS 3187723 3188469 . + 0 ID=cds-WP_069959956.1;Parent=gene-LNP58_RS15155;Dbxref=Genbank:WP_069959956.1;Name=WP_069959956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409175.1;locus_tag=LNP58_RS15155;product=abortive infection family protein;protein_id=WP_069959956.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3188469 3189143 . + . ID=gene-LNP58_RS15160;Name=LNP58_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15160;old_locus_tag=LNP58_15135 NZ_CP086372.1 Protein Homology CDS 3188469 3189143 . + 0 ID=cds-WP_069963885.1;Parent=gene-LNP58_RS15160;Dbxref=Genbank:WP_069963885.1;Name=WP_069963885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903350.1;locus_tag=LNP58_RS15160;product=hypothetical protein;protein_id=WP_069963885.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3189143 3192322 . + . ID=gene-LNP58_RS15165;Name=LNP58_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15165;old_locus_tag=LNP58_15140 NZ_CP086372.1 Protein Homology CDS 3189143 3192322 . + 0 ID=cds-WP_069964578.1;Parent=gene-LNP58_RS15165;Dbxref=Genbank:WP_069964578.1;Name=WP_069964578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409173.1;locus_tag=LNP58_RS15165;product=type I restriction endonuclease subunit R;protein_id=WP_069964578.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3192601 3192867 . + . ID=gene-LNP58_RS15170;Name=LNP58_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15170;old_locus_tag=LNP58_15145 NZ_CP086372.1 Protein Homology CDS 3192601 3192867 . + 0 ID=cds-WP_011409172.1;Parent=gene-LNP58_RS15170;Dbxref=Genbank:WP_011409172.1;Name=WP_011409172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502313.1;locus_tag=LNP58_RS15170;product=hypothetical protein;protein_id=WP_011409172.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3193116 3194690 . - . ID=gene-LNP58_RS15175;Name=LNP58_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15175;old_locus_tag=LNP58_15150 NZ_CP086372.1 Protein Homology CDS 3193116 3194690 . - 0 ID=cds-WP_041182229.1;Parent=gene-LNP58_RS15175;Dbxref=Genbank:WP_041182229.1;Name=WP_041182229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161779.1;locus_tag=LNP58_RS15175;product=XopAU family type III secretion system effector serine/threonine kinase;protein_id=WP_041182229.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3195099 3195875 . + . ID=gene-LNP58_RS15180;Name=LNP58_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15180;old_locus_tag=LNP58_15155 NZ_CP086372.1 Protein Homology CDS 3195099 3195875 . + 0 ID=cds-WP_069963882.1;Parent=gene-LNP58_RS15180;Dbxref=Genbank:WP_069963882.1;Name=WP_069963882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303846.1;locus_tag=LNP58_RS15180;product=type III secretion system effector XopAV;protein_id=WP_069963882.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3196204 3196959 . + . ID=gene-LNP58_RS15185;Name=LNP58_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15185;old_locus_tag=LNP58_15160 NZ_CP086372.1 Protein Homology CDS 3196204 3196959 . + 0 ID=cds-WP_027704159.1;Parent=gene-LNP58_RS15185;Dbxref=Genbank:WP_027704159.1;Name=WP_027704159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157921.1;locus_tag=LNP58_RS15185;product=type III secretion system effector XopAV;protein_id=WP_027704159.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3197020 3197649 . - . ID=gene-LNP58_RS15190;Name=LNP58_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15190;old_locus_tag=LNP58_15165 NZ_CP086372.1 Protein Homology CDS 3197020 3197649 . - 0 ID=cds-WP_011409168.1;Parent=gene-LNP58_RS15190;Dbxref=Genbank:WP_011409168.1;Name=WP_011409168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903342.1;locus_tag=LNP58_RS15190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011409168.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3197864 3198643 . + . ID=gene-LNP58_RS15195;Name=LNP58_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15195;old_locus_tag=LNP58_15170 NZ_CP086372.1 Protein Homology CDS 3197864 3198643 . + 0 ID=cds-WP_011409167.1;Parent=gene-LNP58_RS15195;Dbxref=Genbank:WP_011409167.1;Name=WP_011409167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490632.1;locus_tag=LNP58_RS15195;product=histidine phosphatase family protein;protein_id=WP_011409167.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3198643 3199512 . + . ID=gene-LNP58_RS15200;Name=LNP58_RS15200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15200;old_locus_tag=LNP58_15175;pseudo=true NZ_CP086372.1 Protein Homology CDS 3198643 3199512 . + 0 ID=cds-LNP58_RS15200;Parent=gene-LNP58_RS15200;Note=internal stop;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849374.1;locus_tag=LNP58_RS15200;product=NAD(P)H-hydrate dehydratase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3199838 3200806 . - . ID=gene-LNP58_RS15205;Name=LNP58_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15205;old_locus_tag=LNP58_15180 NZ_CP086372.1 Protein Homology CDS 3199838 3200806 . - 0 ID=cds-WP_011258529.1-3;Parent=gene-LNP58_RS15205;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS15205;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3200880 3201678 . - . ID=gene-LNP58_RS15210;Name=LNP58_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15210;old_locus_tag=LNP58_15185 NZ_CP086372.1 Protein Homology CDS 3201407 3201678 . - 0 ID=cds-WP_094187763.1-3;Parent=gene-LNP58_RS15210;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS15210;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3200880 3201408 . - 1 ID=cds-WP_094187763.1-3;Parent=gene-LNP58_RS15210;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS15210;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3201823 3201975 . + . ID=gene-LNP58_RS15215;Name=LNP58_RS15215;end_range=3201975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15215;old_locus_tag=LNP58_15190;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3201823 3201975 . + 0 ID=cds-LNP58_RS15215;Parent=gene-LNP58_RS15215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3201975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157900.1;locus_tag=LNP58_RS15215;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3202170 3202595 . - . ID=gene-LNP58_RS15220;Name=LNP58_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15220;old_locus_tag=LNP58_15195 NZ_CP086372.1 Protein Homology CDS 3202170 3202595 . - 0 ID=cds-WP_011409165.1;Parent=gene-LNP58_RS15220;Dbxref=Genbank:WP_011409165.1;Name=WP_011409165.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157899.1;locus_tag=LNP58_RS15220;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_011409165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3202605 3202826 . - . ID=gene-LNP58_RS15225;Name=LNP58_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15225;old_locus_tag=LNP58_15200 NZ_CP086372.1 Protein Homology CDS 3202605 3202826 . - 0 ID=cds-WP_011259911.1;Parent=gene-LNP58_RS15225;Dbxref=Genbank:WP_011259911.1;Name=WP_011259911.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302153.1;locus_tag=LNP58_RS15225;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_011259911.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3202976 3203581 . + . ID=gene-LNP58_RS15230;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LNP58_RS15230;old_locus_tag=LNP58_15205 NZ_CP086372.1 Protein Homology CDS 3202976 3203581 . + 0 ID=cds-WP_011409164.1;Parent=gene-LNP58_RS15230;Dbxref=Genbank:WP_011409164.1;Name=WP_011409164.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971824.1;locus_tag=LNP58_RS15230;product=transcriptional repressor LexA;protein_id=WP_011409164.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3203583 3204233 . + . ID=gene-LNP58_RS15235;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=LNP58_RS15235;old_locus_tag=LNP58_15210 NZ_CP086372.1 Protein Homology CDS 3203583 3204233 . + 0 ID=cds-WP_011259909.1;Parent=gene-LNP58_RS15235;Dbxref=Genbank:WP_011259909.1;Name=WP_011259909.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116014.1;locus_tag=LNP58_RS15235;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_011259909.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3204243 3205661 . + . ID=gene-LNP58_RS15240;Name=LNP58_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15240;old_locus_tag=LNP58_15215 NZ_CP086372.1 Protein Homology CDS 3204243 3205661 . + 0 ID=cds-WP_011259908.1;Parent=gene-LNP58_RS15240;Dbxref=Genbank:WP_011259908.1;Name=WP_011259908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502328.1;locus_tag=LNP58_RS15240;product=DNA polymerase Y family protein;protein_id=WP_011259908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3205674 3205856 . + . ID=gene-LNP58_RS15245;Name=LNP58_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15245;old_locus_tag=LNP58_15220 NZ_CP086372.1 Protein Homology CDS 3205674 3205856 . + 0 ID=cds-WP_075239010.1;Parent=gene-LNP58_RS15245;Dbxref=Genbank:WP_075239010.1;Name=WP_075239010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157895.1;locus_tag=LNP58_RS15245;product=hypothetical protein;protein_id=WP_075239010.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3205843 3209094 . + . ID=gene-LNP58_RS15250;Name=LNP58_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15250;old_locus_tag=LNP58_15225 NZ_CP086372.1 Protein Homology CDS 3205843 3209094 . + 0 ID=cds-WP_011259907.1;Parent=gene-LNP58_RS15250;Dbxref=Genbank:WP_011259907.1;Name=WP_011259907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445640.1;locus_tag=LNP58_RS15250;product=error-prone DNA polymerase;protein_id=WP_011259907.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3209405 3210223 . + . ID=gene-LNP58_RS15255;Name=LNP58_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15255;old_locus_tag=LNP58_15230 NZ_CP086372.1 Protein Homology CDS 3209405 3210223 . + 0 ID=cds-WP_027704156.1;Parent=gene-LNP58_RS15255;Dbxref=Genbank:WP_027704156.1;Name=WP_027704156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814392.1;locus_tag=LNP58_RS15255;product=HDOD domain-containing protein;protein_id=WP_027704156.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3210336 3211733 . - . ID=gene-LNP58_RS15260;Name=LNP58_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15260;old_locus_tag=LNP58_15235 NZ_CP086372.1 Protein Homology CDS 3210336 3211733 . - 0 ID=cds-WP_011259904.1;Parent=gene-LNP58_RS15260;Dbxref=Genbank:WP_011259904.1;Name=WP_011259904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489555.1;locus_tag=LNP58_RS15260;product=trypsin-like peptidase domain-containing protein;protein_id=WP_011259904.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3212162 3214132 . + . ID=gene-LNP58_RS15265;Name=LNP58_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15265;old_locus_tag=LNP58_15240 NZ_CP086372.1 Protein Homology CDS 3212162 3214132 . + 0 ID=cds-WP_011259903.1;Parent=gene-LNP58_RS15265;Dbxref=Genbank:WP_011259903.1;Name=WP_011259903.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346708.1;locus_tag=LNP58_RS15265;product=oligopeptide transporter%2C OPT family;protein_id=WP_011259903.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3214457 3215425 . + . ID=gene-LNP58_RS15270;Name=LNP58_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15270;old_locus_tag=LNP58_15245 NZ_CP086372.1 Protein Homology CDS 3214457 3215425 . + 0 ID=cds-WP_011407175.1-2;Parent=gene-LNP58_RS15270;Dbxref=Genbank:WP_011407175.1;Name=WP_011407175.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS15270;product=IS5-like element ISXo1 family transposase;protein_id=WP_011407175.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3215727 3215803 . + . ID=gene-LNP58_RS15275;Name=LNP58_RS15275;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15275;old_locus_tag=LNP58_15250 NZ_CP086372.1 cmsearch ncRNA 3215727 3215803 . + . ID=rna-LNP58_RS15275;Parent=gene-LNP58_RS15275;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15275;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3215727 3215803 . + . ID=exon-LNP58_RS15275-1;Parent=rna-LNP58_RS15275;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15275;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3216417 3217262 . + . ID=gene-LNP58_RS15280;Name=LNP58_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15280;old_locus_tag=LNP58_15255 NZ_CP086372.1 Protein Homology CDS 3216417 3217262 . + 0 ID=cds-WP_027704154.1;Parent=gene-LNP58_RS15280;Dbxref=Genbank:WP_027704154.1;Name=WP_027704154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158565.1;locus_tag=LNP58_RS15280;product=transporter;protein_id=WP_027704154.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3217324 3217395 . + . ID=gene-LNP58_RS15285;Name=LNP58_RS15285;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15285;old_locus_tag=LNP58_15260 NZ_CP086372.1 cmsearch ncRNA 3217324 3217395 . + . ID=rna-LNP58_RS15285;Parent=gene-LNP58_RS15285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15285;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3217324 3217395 . + . ID=exon-LNP58_RS15285-1;Parent=rna-LNP58_RS15285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15285;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3217529 3219649 . + . ID=gene-LNP58_RS15290;Name=LNP58_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15290;old_locus_tag=LNP58_15265 NZ_CP086372.1 Protein Homology CDS 3217529 3219649 . + 0 ID=cds-WP_027704153.1;Parent=gene-LNP58_RS15290;Dbxref=Genbank:WP_027704153.1;Name=WP_027704153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169463.1;locus_tag=LNP58_RS15290;product=S9 family peptidase;protein_id=WP_027704153.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3219723 3220622 . - . ID=gene-LNP58_RS15295;Name=LNP58_RS15295;end_range=3220622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15295;old_locus_tag=LNP58_15270;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3219723 3220622 . - 0 ID=cds-LNP58_RS15295;Parent=gene-LNP58_RS15295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3220622,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS15295;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3220686 3221934 . + . ID=gene-LNP58_RS15300;Name=LNP58_RS15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15300;old_locus_tag=LNP58_15275;pseudo=true NZ_CP086372.1 Protein Homology CDS 3220686 3221934 . + 0 ID=cds-LNP58_RS15300;Parent=gene-LNP58_RS15300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS15300;product=ISL3-like element ISXoo13 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3221941 3222432 . - . ID=gene-LNP58_RS15305;Name=LNP58_RS15305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15305;old_locus_tag=LNP58_15280;partial=true;pseudo=true;start_range=.,3221941 NZ_CP086372.1 Protein Homology CDS 3221941 3222432 . - 0 ID=cds-LNP58_RS15305;Parent=gene-LNP58_RS15305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS15305;partial=true;product=transposase;pseudo=true;start_range=.,3221941;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3222514 3222926 . + . ID=gene-LNP58_RS15310;Name=LNP58_RS15310;end_range=3222926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15310;old_locus_tag=LNP58_15285;partial=true;pseudo=true;start_range=.,3222514 NZ_CP086372.1 Protein Homology CDS 3222514 3222926 . + 0 ID=cds-LNP58_RS15310;Parent=gene-LNP58_RS15310;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=3222926,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=LNP58_RS15310;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,3222514;transl_table=11 NZ_CP086372.1 RefSeq gene 3223096 3223557 . + . ID=gene-LNP58_RS15315;Name=LNP58_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15315;old_locus_tag=LNP58_15290 NZ_CP086372.1 Protein Homology CDS 3223096 3223557 . + 0 ID=cds-WP_011409154.1;Parent=gene-LNP58_RS15315;Dbxref=Genbank:WP_011409154.1;Name=WP_011409154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157885.1;locus_tag=LNP58_RS15315;product=hypothetical protein;protein_id=WP_011409154.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3223689 3224414 . + . ID=gene-LNP58_RS15320;Name=LNP58_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15320;old_locus_tag=LNP58_15295 NZ_CP086372.1 Protein Homology CDS 3223689 3224414 . + 0 ID=cds-WP_011259895.1;Parent=gene-LNP58_RS15320;Dbxref=Genbank:WP_011259895.1;Name=WP_011259895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371630.1;locus_tag=LNP58_RS15320;product=AraC family transcriptional regulator;protein_id=WP_011259895.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3224564 3224776 . - . ID=gene-LNP58_RS15325;Name=LNP58_RS15325;end_range=3224776,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15325;old_locus_tag=LNP58_15300;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3224564 3224776 . - 0 ID=cds-LNP58_RS15325;Parent=gene-LNP58_RS15325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3224776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15325;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3224798 3225832 . - . ID=gene-LNP58_RS15330;Name=LNP58_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15330;old_locus_tag=LNP58_15305 NZ_CP086372.1 Protein Homology CDS 3224798 3225832 . - 0 ID=cds-WP_011407587.1-3;Parent=gene-LNP58_RS15330;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=LNP58_RS15330;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3225887 3226645 . - . ID=gene-LNP58_RS15335;Name=LNP58_RS15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15335;old_locus_tag=LNP58_15310;partial=true;pseudo=true;start_range=.,3225887 NZ_CP086372.1 Protein Homology CDS 3225887 3226645 . - 0 ID=cds-LNP58_RS15335;Parent=gene-LNP58_RS15335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15335;partial=true;product=IS1595-like element ISXo5 family transposase;pseudo=true;start_range=.,3225887;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3226853 3227539 . - . ID=gene-LNP58_RS15340;Name=LNP58_RS15340;end_range=3227539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15340;old_locus_tag=LNP58_15315;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3226853 3227539 . - 0 ID=cds-LNP58_RS15340;Parent=gene-LNP58_RS15340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3227539,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS15340;partial=true;product=IS5-like element ISXo1 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3227560 3228936 . - . ID=gene-LNP58_RS15345;Name=LNP58_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15345;old_locus_tag=LNP58_15320 NZ_CP086372.1 Protein Homology CDS 3227560 3228936 . - 0 ID=cds-WP_069964507.1-6;Parent=gene-LNP58_RS15345;Dbxref=Genbank:WP_069964507.1;Name=WP_069964507.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS15345;product=IS5-like element ISXo4 family transposase;protein_id=WP_069964507.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3229045 3229341 . - . ID=gene-LNP58_RS15350;Name=LNP58_RS15350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15350;old_locus_tag=LNP58_15325;partial=true;pseudo=true;start_range=.,3229045 NZ_CP086372.1 Protein Homology CDS 3229045 3229341 . - 0 ID=cds-LNP58_RS15350;Parent=gene-LNP58_RS15350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS15350;partial=true;product=transposase;pseudo=true;start_range=.,3229045;transl_table=11 NZ_CP086372.1 RefSeq gene 3229509 3229585 . + . ID=gene-LNP58_RS15355;Name=LNP58_RS15355;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15355;old_locus_tag=LNP58_15330 NZ_CP086372.1 cmsearch ncRNA 3229509 3229585 . + . ID=rna-LNP58_RS15355;Parent=gene-LNP58_RS15355;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15355;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3229509 3229585 . + . ID=exon-LNP58_RS15355-1;Parent=rna-LNP58_RS15355;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15355;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3230104 3232245 . + . ID=gene-LNP58_RS15360;Name=LNP58_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15360;old_locus_tag=LNP58_15335 NZ_CP086372.1 Protein Homology CDS 3230104 3232245 . + 0 ID=cds-WP_042465136.1;Parent=gene-LNP58_RS15360;Dbxref=Genbank:WP_042465136.1;Name=WP_042465136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259894.1;locus_tag=LNP58_RS15360;product=type III secretion system effector protein XopP;protein_id=WP_042465136.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3232473 3233711 . - . ID=gene-LNP58_RS15365;Name=LNP58_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15365;old_locus_tag=LNP58_15340 NZ_CP086372.1 Protein Homology CDS 3232473 3233711 . - 0 ID=cds-WP_042465674.1;Parent=gene-LNP58_RS15365;Dbxref=Genbank:WP_042465674.1;Name=WP_042465674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154699.1;locus_tag=LNP58_RS15365;product=hypothetical protein;protein_id=WP_042465674.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3234537 3236642 . - . ID=gene-LNP58_RS15370;Name=LNP58_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15370;old_locus_tag=LNP58_15345 NZ_CP086372.1 Protein Homology CDS 3234537 3236642 . - 0 ID=cds-WP_011409150.1;Parent=gene-LNP58_RS15370;Dbxref=Genbank:WP_011409150.1;Name=WP_011409150.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154698.1;locus_tag=LNP58_RS15370;product=catalase;protein_id=WP_011409150.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3236860 3237148 . - . ID=gene-LNP58_RS15375;Name=LNP58_RS15375;end_range=3237148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15375;old_locus_tag=LNP58_15350;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3236860 3237148 . - 0 ID=cds-LNP58_RS15375;Parent=gene-LNP58_RS15375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3237148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050780.1;locus_tag=LNP58_RS15375;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3237168 3237593 . - . ID=gene-LNP58_RS15380;Name=LNP58_RS15380;end_range=3237593,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15380;old_locus_tag=LNP58_15355;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3237168 3237593 . - 0 ID=cds-LNP58_RS15380;Parent=gene-LNP58_RS15380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3237593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=LNP58_RS15380;partial=true;product=DUF3396 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3237669 3238671 . + . ID=gene-LNP58_RS15385;Name=LNP58_RS15385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15385;old_locus_tag=LNP58_15360;pseudo=true NZ_CP086372.1 Protein Homology CDS 3237669 3238671 . + 0 ID=cds-LNP58_RS15385;Parent=gene-LNP58_RS15385;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445627.1;locus_tag=LNP58_RS15385;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3238809 3241664 . + . ID=gene-LNP58_RS15390;Name=LNP58_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15390;old_locus_tag=LNP58_15365 NZ_CP086372.1 Protein Homology CDS 3238809 3241664 . + 0 ID=cds-WP_075242204.1;Parent=gene-LNP58_RS15390;Dbxref=Genbank:WP_075242204.1;Name=WP_075242204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159178.1;locus_tag=LNP58_RS15390;product=DUF2339 domain-containing protein;protein_id=WP_075242204.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3241661 3243019 . + . ID=gene-LNP58_RS15395;Name=LNP58_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15395;old_locus_tag=LNP58_15370 NZ_CP086372.1 Protein Homology CDS 3241661 3243019 . + 0 ID=cds-WP_011409146.1;Parent=gene-LNP58_RS15395;Dbxref=Genbank:WP_011409146.1;Name=WP_011409146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155483.1;locus_tag=LNP58_RS15395;product=DUF3999 domain-containing protein;protein_id=WP_011409146.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3243353 3244528 . + . ID=gene-LNP58_RS15400;Name=LNP58_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15400;old_locus_tag=LNP58_15375 NZ_CP086372.1 Protein Homology CDS 3243353 3244528 . + 0 ID=cds-WP_011259887.1;Parent=gene-LNP58_RS15400;Dbxref=Genbank:WP_011259887.1;Name=WP_011259887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445624.1;locus_tag=LNP58_RS15400;product=phosphoglycerate kinase;protein_id=WP_011259887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3244525 3245169 . + . ID=gene-LNP58_RS15405;Name=LNP58_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15405;old_locus_tag=LNP58_15380 NZ_CP086372.1 Protein Homology CDS 3244525 3245169 . + 0 ID=cds-WP_011259886.1;Parent=gene-LNP58_RS15405;Dbxref=Genbank:WP_011259886.1;Name=WP_011259886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300871.1;locus_tag=LNP58_RS15405;product=HAD family hydrolase;protein_id=WP_011259886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3245426 3246892 . + . ID=gene-LNP58_RS15410;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LNP58_RS15410;old_locus_tag=LNP58_15385 NZ_CP086372.1 Protein Homology CDS 3245426 3246892 . + 0 ID=cds-WP_011409145.1;Parent=gene-LNP58_RS15410;Dbxref=Genbank:WP_011409145.1;Name=WP_011409145.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487265.1;locus_tag=LNP58_RS15410;product=pyruvate kinase;protein_id=WP_011409145.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3247482 3248486 . + . ID=gene-LNP58_RS15415;Name=LNP58_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15415;old_locus_tag=LNP58_15390 NZ_CP086372.1 Protein Homology CDS 3247482 3248486 . + 0 ID=cds-WP_011259884.1;Parent=gene-LNP58_RS15415;Dbxref=Genbank:WP_011259884.1;Name=WP_011259884.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437525.1;locus_tag=LNP58_RS15415;product=fructose-bisphosphate aldolase class I;protein_id=WP_011259884.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3248688 3249227 . - . ID=gene-LNP58_RS15420;Name=LNP58_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15420;old_locus_tag=LNP58_15395 NZ_CP086372.1 Protein Homology CDS 3248688 3249227 . - 0 ID=cds-WP_041182225.1;Parent=gene-LNP58_RS15420;Dbxref=Genbank:WP_041182225.1;Name=WP_041182225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300868.1;locus_tag=LNP58_RS15420;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_041182225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3249423 3249929 . - . ID=gene-LNP58_RS15425;Name=LNP58_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15425;old_locus_tag=LNP58_15400 NZ_CP086372.1 Protein Homology CDS 3249423 3249929 . - 0 ID=cds-WP_011259882.1;Parent=gene-LNP58_RS15425;Dbxref=Genbank:WP_011259882.1;Name=WP_011259882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155478.1;locus_tag=LNP58_RS15425;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_011259882.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3250237 3251196 . - . ID=gene-LNP58_RS15430;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LNP58_RS15430;old_locus_tag=LNP58_15405 NZ_CP086372.1 Protein Homology CDS 3250237 3251196 . - 0 ID=cds-WP_011259881.1;Parent=gene-LNP58_RS15430;Dbxref=Genbank:WP_011259881.1;Name=WP_011259881.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660021.1;locus_tag=LNP58_RS15430;product=cysteine synthase A;protein_id=WP_011259881.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3251213 3252418 . - . ID=gene-LNP58_RS15435;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LNP58_RS15435;old_locus_tag=LNP58_15410 NZ_CP086372.1 Protein Homology CDS 3251213 3252418 . - 0 ID=cds-WP_075240596.1;Parent=gene-LNP58_RS15435;Dbxref=Genbank:WP_075240596.1;Name=WP_075240596.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922380.1;locus_tag=LNP58_RS15435;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_075240596.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3252586 3253569 . + . ID=gene-LNP58_RS15440;Name=LNP58_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15440;old_locus_tag=LNP58_15415 NZ_CP086372.1 Protein Homology CDS 3252586 3253569 . + 0 ID=cds-WP_044756573.1;Parent=gene-LNP58_RS15440;Dbxref=Genbank:WP_044756573.1;Name=WP_044756573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477207.1;locus_tag=LNP58_RS15440;product=LysR family transcriptional regulator;protein_id=WP_044756573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3253580 3253861 . + . ID=gene-LNP58_RS15445;Name=LNP58_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15445;old_locus_tag=LNP58_15420 NZ_CP086372.1 Protein Homology CDS 3253580 3253861 . + 0 ID=cds-WP_044756574.1;Parent=gene-LNP58_RS15445;Dbxref=Genbank:WP_044756574.1;Name=WP_044756574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850560.1;locus_tag=LNP58_RS15445;product=hypothetical protein;protein_id=WP_044756574.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3253877 3253951 . - . ID=gene-LNP58_RS15450;Name=LNP58_RS15450;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15450;old_locus_tag=LNP58_15425 NZ_CP086372.1 cmsearch ncRNA 3253877 3253951 . - . ID=rna-LNP58_RS15450;Parent=gene-LNP58_RS15450;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15450;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3253877 3253951 . - . ID=exon-LNP58_RS15450-1;Parent=rna-LNP58_RS15450;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15450;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3254201 3254277 . + . ID=gene-LNP58_RS15455;Name=LNP58_RS15455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15455;old_locus_tag=LNP58_15430 NZ_CP086372.1 cmsearch ncRNA 3254201 3254277 . + . ID=rna-LNP58_RS15455;Parent=gene-LNP58_RS15455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15455;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3254201 3254277 . + . ID=exon-LNP58_RS15455-1;Parent=rna-LNP58_RS15455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15455;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3254754 3254827 . - . ID=gene-LNP58_RS15460;Name=LNP58_RS15460;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15460;old_locus_tag=LNP58_15435 NZ_CP086372.1 cmsearch ncRNA 3254754 3254827 . - . ID=rna-LNP58_RS15460;Parent=gene-LNP58_RS15460;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15460;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3254754 3254827 . - . ID=exon-LNP58_RS15460-1;Parent=rna-LNP58_RS15460;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15460;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3254931 3256127 . - . ID=gene-LNP58_RS15465;Name=LNP58_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15465;old_locus_tag=LNP58_15440 NZ_CP086372.1 Protein Homology CDS 3254931 3256127 . - 0 ID=cds-WP_012445617.1;Parent=gene-LNP58_RS15465;Dbxref=Genbank:WP_012445617.1;Name=WP_012445617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155473.1;locus_tag=LNP58_RS15465;product=GAF domain-containing sensor histidine kinase;protein_id=WP_012445617.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3256450 3256887 . + . ID=gene-LNP58_RS15470;Name=LNP58_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15470;old_locus_tag=LNP58_15445 NZ_CP086372.1 Protein Homology CDS 3256450 3256887 . + 0 ID=cds-WP_012445616.1;Parent=gene-LNP58_RS15470;Dbxref=Genbank:WP_012445616.1;Name=WP_012445616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850457.1;locus_tag=LNP58_RS15470;product=DUF2946 family protein;protein_id=WP_012445616.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3257082 3259085 . + . ID=gene-LNP58_RS15475;Name=LNP58_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15475;old_locus_tag=LNP58_15450 NZ_CP086372.1 Protein Homology CDS 3257082 3259085 . + 0 ID=cds-WP_041182223.1;Parent=gene-LNP58_RS15475;Dbxref=Genbank:WP_041182223.1;Name=WP_041182223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155471.1;locus_tag=LNP58_RS15475;product=TonB-dependent receptor;protein_id=WP_041182223.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3259085 3260686 . + . ID=gene-LNP58_RS15480;Name=LNP58_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15480;old_locus_tag=LNP58_15455 NZ_CP086372.1 Protein Homology CDS 3259085 3260686 . + 0 ID=cds-WP_069959950.1;Parent=gene-LNP58_RS15480;Dbxref=Genbank:WP_069959950.1;Name=WP_069959950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114669.1;locus_tag=LNP58_RS15480;product=PepSY domain-containing protein;protein_id=WP_069959950.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3260822 3261547 . - . ID=gene-LNP58_RS15485;Name=LNP58_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15485;old_locus_tag=LNP58_15460 NZ_CP086372.1 Protein Homology CDS 3260822 3261547 . - 0 ID=cds-WP_011259873.1;Parent=gene-LNP58_RS15485;Dbxref=Genbank:WP_011259873.1;Name=WP_011259873.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038282.1;locus_tag=LNP58_RS15485;product=phosphoadenylyl-sulfate reductase;protein_id=WP_011259873.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3261544 3263265 . - . ID=gene-LNP58_RS15490;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LNP58_RS15490;old_locus_tag=LNP58_15465 NZ_CP086372.1 Protein Homology CDS 3261544 3263265 . - 0 ID=cds-WP_011409143.1;Parent=gene-LNP58_RS15490;Dbxref=Genbank:WP_011409143.1;Name=WP_011409143.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409143.1;locus_tag=LNP58_RS15490;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_011409143.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3263374 3265221 . - . ID=gene-LNP58_RS15495;Name=LNP58_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15495;old_locus_tag=LNP58_15470 NZ_CP086372.1 Protein Homology CDS 3263374 3265221 . - 0 ID=cds-WP_011409142.1;Parent=gene-LNP58_RS15495;Dbxref=Genbank:WP_011409142.1;Name=WP_011409142.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504375.1;locus_tag=LNP58_RS15495;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_011409142.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3265402 3266310 . + . ID=gene-LNP58_RS15500;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LNP58_RS15500;old_locus_tag=LNP58_15475 NZ_CP086372.1 Protein Homology CDS 3265402 3266310 . + 0 ID=cds-WP_011259870.1;Parent=gene-LNP58_RS15500;Dbxref=Genbank:WP_011259870.1;Name=WP_011259870.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370926.1;locus_tag=LNP58_RS15500;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_011259870.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3266373 3268286 . + . ID=gene-LNP58_RS15505;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LNP58_RS15505;old_locus_tag=LNP58_15480 NZ_CP086372.1 Protein Homology CDS 3266373 3268286 . + 0 ID=cds-WP_027704223.1;Parent=gene-LNP58_RS15505;Dbxref=Genbank:WP_027704223.1;Name=WP_027704223.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167870.1;locus_tag=LNP58_RS15505;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_027704223.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3268721 3269791 . + . ID=gene-LNP58_RS15510;Name=LNP58_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15510;old_locus_tag=LNP58_15485 NZ_CP086372.1 Protein Homology CDS 3268721 3269791 . + 0 ID=cds-WP_011409140.1;Parent=gene-LNP58_RS15510;Dbxref=Genbank:WP_011409140.1;Name=WP_011409140.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974022.1;locus_tag=LNP58_RS15510;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011409140.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3269788 3272913 . + . ID=gene-LNP58_RS15515;Name=LNP58_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15515;old_locus_tag=LNP58_15490 NZ_CP086372.1 Protein Homology CDS 3269788 3272913 . + 0 ID=cds-WP_011259867.1;Parent=gene-LNP58_RS15515;Dbxref=Genbank:WP_011259867.1;Name=WP_011259867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370936.1;locus_tag=LNP58_RS15515;product=efflux RND transporter permease subunit;protein_id=WP_011259867.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3273265 3275934 . + . ID=gene-LNP58_RS15520;Name=LNP58_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15520;old_locus_tag=LNP58_15495 NZ_CP086372.1 Protein Homology CDS 3273265 3275934 . + 0 ID=cds-WP_042465131.1;Parent=gene-LNP58_RS15520;Dbxref=Genbank:WP_042465131.1;Name=WP_042465131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301826.1;locus_tag=LNP58_RS15520;product=M1 family metallopeptidase;protein_id=WP_042465131.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3276299 3276751 . - . ID=gene-LNP58_RS15525;Name=LNP58_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15525;old_locus_tag=LNP58_15500 NZ_CP086372.1 Protein Homology CDS 3276299 3276751 . - 0 ID=cds-WP_011259865.1;Parent=gene-LNP58_RS15525;Dbxref=Genbank:WP_011259865.1;Name=WP_011259865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409137.1;locus_tag=LNP58_RS15525;product=hypothetical protein;protein_id=WP_011259865.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3276814 3277779 . + . ID=gene-LNP58_RS15530;Name=LNP58_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15530;old_locus_tag=LNP58_15505 NZ_CP086372.1 Protein Homology CDS 3276814 3277779 . + 0 ID=cds-WP_109181988.1;Parent=gene-LNP58_RS15530;Dbxref=Genbank:WP_109181988.1;Name=WP_109181988.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15530;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181988.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3278435 3278970 . + . ID=gene-LNP58_RS15535;Name=LNP58_RS15535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15535;old_locus_tag=LNP58_15510;pseudo=true NZ_CP086372.1 Protein Homology CDS 3278435 3278970 . + 0 ID=cds-LNP58_RS15535;Parent=gene-LNP58_RS15535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477169.1;locus_tag=LNP58_RS15535;product=GNAT family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3279127 3280038 . + . ID=gene-LNP58_RS15540;Name=LNP58_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15540;old_locus_tag=LNP58_15515 NZ_CP086372.1 Protein Homology CDS 3279127 3280038 . + 0 ID=cds-WP_011409134.1;Parent=gene-LNP58_RS15540;Dbxref=Genbank:WP_011409134.1;Name=WP_011409134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301824.1;locus_tag=LNP58_RS15540;product=RNA methyltransferase;protein_id=WP_011409134.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3280261 3281556 . + . ID=gene-LNP58_RS15545;Name=LNP58_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15545;old_locus_tag=LNP58_15520 NZ_CP086372.1 Protein Homology CDS 3280261 3281556 . + 0 ID=cds-WP_228329657.1;Parent=gene-LNP58_RS15545;Dbxref=Genbank:WP_228329657.1;Name=WP_228329657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.2;locus_tag=LNP58_RS15545;product=carboxylesterase family protein;protein_id=WP_228329657.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3281644 3282607 . - . ID=gene-LNP58_RS15550;Name=LNP58_RS15550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15550;old_locus_tag=LNP58_15525;pseudo=true NZ_CP086372.1 Protein Homology CDS 3281644 3282607 . - 0 ID=cds-LNP58_RS15550;Parent=gene-LNP58_RS15550;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS15550;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3283112 3283875 . + . ID=gene-LNP58_RS15555;Name=LNP58_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15555;old_locus_tag=LNP58_15530 NZ_CP086372.1 Protein Homology CDS 3283112 3283427 . + 0 ID=cds-WP_094187715.1-8;Parent=gene-LNP58_RS15555;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15555;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3283427 3283875 . + 2 ID=cds-WP_094187715.1-8;Parent=gene-LNP58_RS15555;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15555;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3283937 3284012 . + . ID=gene-LNP58_RS15560;Name=LNP58_RS15560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15560;old_locus_tag=LNP58_15535 NZ_CP086372.1 cmsearch ncRNA 3283937 3284012 . + . ID=rna-LNP58_RS15560;Parent=gene-LNP58_RS15560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15560;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3283937 3284012 . + . ID=exon-LNP58_RS15560-1;Parent=rna-LNP58_RS15560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15560;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3284007 3284429 . - . ID=gene-LNP58_RS15565;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LNP58_RS15565;old_locus_tag=LNP58_15540 NZ_CP086372.1 Protein Homology CDS 3284007 3284429 . - 0 ID=cds-WP_012445603.1;Parent=gene-LNP58_RS15565;Dbxref=Genbank:WP_012445603.1;Name=WP_012445603.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409130.1;locus_tag=LNP58_RS15565;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_012445603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3284490 3285203 . - . ID=gene-LNP58_RS15570;Name=LNP58_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15570;old_locus_tag=LNP58_15545 NZ_CP086372.1 Protein Homology CDS 3284490 3285203 . - 0 ID=cds-WP_011409129.1;Parent=gene-LNP58_RS15570;Dbxref=Genbank:WP_011409129.1;Name=WP_011409129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052181.1;locus_tag=LNP58_RS15570;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011409129.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3285372 3286388 . - . ID=gene-LNP58_RS15575;Name=LNP58_RS15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15575;old_locus_tag=LNP58_15550;pseudo=true NZ_CP086372.1 Protein Homology CDS 3285372 3286388 . - 0 ID=cds-LNP58_RS15575;Parent=gene-LNP58_RS15575;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=LNP58_RS15575;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3286736 3288111 . - . ID=gene-LNP58_RS15580;Name=LNP58_RS15580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15580;old_locus_tag=LNP58_15555;pseudo=true NZ_CP086372.1 Protein Homology CDS 3286736 3288111 . - 0 ID=cds-LNP58_RS15580;Parent=gene-LNP58_RS15580;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS15580;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3288250 3288525 . - . ID=gene-LNP58_RS15585;Name=LNP58_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15585;old_locus_tag=LNP58_15560 NZ_CP086372.1 Protein Homology CDS 3288250 3288525 . - 0 ID=cds-WP_011259856.1;Parent=gene-LNP58_RS15585;Dbxref=Genbank:WP_011259856.1;Name=WP_011259856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259856.1;locus_tag=LNP58_RS15585;product=hypothetical protein;protein_id=WP_011259856.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3288785 3289126 . + . ID=gene-LNP58_RS15590;Name=LNP58_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15590;old_locus_tag=LNP58_15565 NZ_CP086372.1 Protein Homology CDS 3288785 3289126 . + 0 ID=cds-WP_011409127.1;Parent=gene-LNP58_RS15590;Dbxref=Genbank:WP_011409127.1;Name=WP_011409127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155445.1;locus_tag=LNP58_RS15590;product=Rieske (2Fe-2S) protein;protein_id=WP_011409127.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3289184 3291046 . - . ID=gene-LNP58_RS15595;Name=LNP58_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15595;old_locus_tag=LNP58_15570 NZ_CP086372.1 Protein Homology CDS 3289184 3291046 . - 0 ID=cds-WP_011259854.1;Parent=gene-LNP58_RS15595;Dbxref=Genbank:WP_011259854.1;Name=WP_011259854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237329.1;locus_tag=LNP58_RS15595;product=SLC13 family permease;protein_id=WP_011259854.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3291122 3291880 . - . ID=gene-LNP58_RS15600;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LNP58_RS15600;old_locus_tag=LNP58_15575 NZ_CP086372.1 Protein Homology CDS 3291122 3291880 . - 0 ID=cds-WP_011259853.1;Parent=gene-LNP58_RS15600;Dbxref=Genbank:WP_011259853.1;Name=WP_011259853.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851486.1;locus_tag=LNP58_RS15600;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011259853.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3292182 3292976 . - . ID=gene-LNP58_RS15605;Name=LNP58_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15605;old_locus_tag=LNP58_15580 NZ_CP086372.1 Protein Homology CDS 3292182 3292976 . - 0 ID=cds-WP_011409125.1;Parent=gene-LNP58_RS15605;Dbxref=Genbank:WP_011409125.1;Name=WP_011409125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487184.1;locus_tag=LNP58_RS15605;product=thiazole synthase;protein_id=WP_011409125.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3293512 3293712 . - . ID=gene-LNP58_RS15610;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LNP58_RS15610;old_locus_tag=LNP58_15585 NZ_CP086372.1 Protein Homology CDS 3293512 3293712 . - 0 ID=cds-WP_011259851.1;Parent=gene-LNP58_RS15610;Dbxref=Genbank:WP_011259851.1;Name=WP_011259851.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903326.1;locus_tag=LNP58_RS15610;product=sulfur carrier protein ThiS;protein_id=WP_011259851.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3293903 3295687 . + . ID=gene-LNP58_RS15615;Name=LNP58_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15615;old_locus_tag=LNP58_15590 NZ_CP086372.1 Protein Homology CDS 3293903 3295687 . + 0 ID=cds-WP_012445601.1;Parent=gene-LNP58_RS15615;Dbxref=Genbank:WP_012445601.1;Name=WP_012445601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914545.1;locus_tag=LNP58_RS15615;product=autotransporter domain-containing esterase;protein_id=WP_012445601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3295804 3295877 . + . ID=gene-LNP58_RS15620;Name=LNP58_RS15620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS15620;old_locus_tag=LNP58_15595 NZ_CP086372.1 tRNAscan-SE tRNA 3295804 3295877 . + . ID=rna-LNP58_RS15620;Parent=gene-LNP58_RS15620;anticodon=(pos:3295836..3295838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS15620;product=tRNA-Gly NZ_CP086372.1 tRNAscan-SE exon 3295804 3295877 . + . ID=exon-LNP58_RS15620-1;Parent=rna-LNP58_RS15620;anticodon=(pos:3295836..3295838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS15620;product=tRNA-Gly NZ_CP086372.1 RefSeq pseudogene 3296269 3297229 . - . ID=gene-LNP58_RS15625;Name=LNP58_RS15625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15625;old_locus_tag=LNP58_15600;pseudo=true NZ_CP086372.1 Protein Homology CDS 3296269 3297229 . - 0 ID=cds-LNP58_RS15625;Parent=gene-LNP58_RS15625;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS15625;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3297479 3297874 . - . ID=gene-LNP58_RS15630;Name=LNP58_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15630;old_locus_tag=LNP58_15605 NZ_CP086372.1 GeneMarkS-2+ CDS 3297479 3297874 . - 0 ID=cds-WP_228329658.1;Parent=gene-LNP58_RS15630;Dbxref=Genbank:WP_228329658.1;Name=WP_228329658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15630;product=hypothetical protein;protein_id=WP_228329658.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3297944 3299045 . + . ID=gene-LNP58_RS15635;Name=LNP58_RS15635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15635;old_locus_tag=LNP58_15610;pseudo=true NZ_CP086372.1 Protein Homology CDS 3297944 3299045 . + 0 ID=cds-LNP58_RS15635;Parent=gene-LNP58_RS15635;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS15635;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3299080 3299598 . - . ID=gene-LNP58_RS15640;Name=LNP58_RS15640;end_range=3299598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15640;old_locus_tag=LNP58_15615;partial=true;pseudo=true;start_range=.,3299080 NZ_CP086372.1 Protein Homology CDS 3299080 3299598 . - 0 ID=cds-LNP58_RS15640;Parent=gene-LNP58_RS15640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3299598,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS15640;partial=true;product=transposase;pseudo=true;start_range=.,3299080;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3299816 3299926 . + . ID=gene-LNP58_RS15645;Name=LNP58_RS15645;end_range=3299926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15645;old_locus_tag=LNP58_15620;partial=true;pseudo=true;start_range=.,3299816 NZ_CP086372.1 Protein Homology CDS 3299816 3299926 . + 0 ID=cds-LNP58_RS15645;Parent=gene-LNP58_RS15645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3299926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS15645;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3299816;transl_table=11 NZ_CP086372.1 RefSeq gene 3300153 3300545 . + . ID=gene-LNP58_RS15650;Name=LNP58_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15650;old_locus_tag=LNP58_15625 NZ_CP086372.1 Protein Homology CDS 3300153 3300545 . + 0 ID=cds-WP_027704094.1;Parent=gene-LNP58_RS15650;Dbxref=Genbank:WP_027704094.1;Name=WP_027704094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173974.1;locus_tag=LNP58_RS15650;product=hypothetical protein;protein_id=WP_027704094.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3300636 3301028 . + . ID=gene-LNP58_RS15655;Name=LNP58_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15655;old_locus_tag=LNP58_15630 NZ_CP086372.1 Protein Homology CDS 3300636 3301028 . + 0 ID=cds-WP_011409118.1;Parent=gene-LNP58_RS15655;Dbxref=Genbank:WP_011409118.1;Name=WP_011409118.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154750.1;locus_tag=LNP58_RS15655;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_011409118.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3301061 3301859 . - . ID=gene-LNP58_RS15660;Name=LNP58_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15660;old_locus_tag=LNP58_15635 NZ_CP086372.1 Protein Homology CDS 3301588 3301859 . - 0 ID=cds-WP_094187763.1-4;Parent=gene-LNP58_RS15660;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS15660;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3301061 3301589 . - 1 ID=cds-WP_094187763.1-4;Parent=gene-LNP58_RS15660;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS15660;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3302033 3302683 . - . ID=gene-LNP58_RS15665;Name=LNP58_RS15665;end_range=3302683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15665;old_locus_tag=LNP58_15640;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3302033 3302683 . - 0 ID=cds-LNP58_RS15665;Parent=gene-LNP58_RS15665;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3302683,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS15665;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3302731 3303494 . + . ID=gene-LNP58_RS15670;Name=LNP58_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15670;old_locus_tag=LNP58_15645 NZ_CP086372.1 Protein Homology CDS 3302731 3303046 . + 0 ID=cds-WP_094187804.1-2;Parent=gene-LNP58_RS15670;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15670;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3303046 3303494 . + 2 ID=cds-WP_094187804.1-2;Parent=gene-LNP58_RS15670;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15670;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3303491 3303748 . - . ID=gene-LNP58_RS15675;Name=LNP58_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15675 NZ_CP086372.1 GeneMarkS-2+ CDS 3303491 3303748 . - 0 ID=cds-WP_229001951.1;Parent=gene-LNP58_RS15675;Dbxref=Genbank:WP_229001951.1;Name=WP_229001951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15675;product=hypothetical protein;protein_id=WP_229001951.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3303870 3304835 . - . ID=gene-LNP58_RS15685;Name=LNP58_RS15685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15685;old_locus_tag=LNP58_15655;pseudo=true NZ_CP086372.1 Protein Homology CDS 3303870 3304835 . - 0 ID=cds-LNP58_RS15685;Parent=gene-LNP58_RS15685;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15685;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3304980 3305504 . + . ID=gene-LNP58_RS15690;Name=LNP58_RS15690;end_range=3305504,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15690;old_locus_tag=LNP58_15660;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3304980 3305504 . + 0 ID=cds-LNP58_RS15690;Parent=gene-LNP58_RS15690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3305504,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS15690;partial=true;product=IS5-like element ISXo1 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3305471 3306219 . - . ID=gene-LNP58_RS15695;Name=LNP58_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15695;old_locus_tag=LNP58_15665 NZ_CP086372.1 Protein Homology CDS 3305904 3306219 . - 0 ID=cds-WP_228329659.1;Parent=gene-LNP58_RS15695;Dbxref=Genbank:WP_228329659.1;Name=WP_228329659.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15695;product=IS5 family transposase;protein_id=WP_228329659.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3305471 3305904 . - 2 ID=cds-WP_228329659.1;Parent=gene-LNP58_RS15695;Dbxref=Genbank:WP_228329659.1;Name=WP_228329659.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15695;product=IS5 family transposase;protein_id=WP_228329659.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3306460 3307425 . + . ID=gene-LNP58_RS15700;Name=LNP58_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15700;old_locus_tag=LNP58_15670 NZ_CP086372.1 Protein Homology CDS 3306460 3307425 . + 0 ID=cds-WP_041182722.1;Parent=gene-LNP58_RS15700;Dbxref=Genbank:WP_041182722.1;Name=WP_041182722.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15700;product=IS1595-like element ISXo5 family transposase;protein_id=WP_041182722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3307422 3307949 . - . ID=gene-LNP58_RS15705;Name=LNP58_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15705;old_locus_tag=LNP58_15675 NZ_CP086372.1 Protein Homology CDS 3307422 3307949 . - 0 ID=cds-WP_011259834.1;Parent=gene-LNP58_RS15705;Dbxref=Genbank:WP_011259834.1;Name=WP_011259834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259834.1;locus_tag=LNP58_RS15705;product=hypothetical protein;protein_id=WP_011259834.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3308244 3309200 . + . ID=gene-LNP58_RS15710;Name=LNP58_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15710;old_locus_tag=LNP58_15680 NZ_CP086372.1 Protein Homology CDS 3308244 3309200 . + 0 ID=cds-WP_228329660.1;Parent=gene-LNP58_RS15710;Dbxref=Genbank:WP_228329660.1;Name=WP_228329660.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS15710;product=IS30-like element IS1112b family transposase;protein_id=WP_228329660.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3309201 3310367 . + . ID=gene-LNP58_RS15715;Name=LNP58_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15715;old_locus_tag=LNP58_15685 NZ_CP086372.1 Protein Homology CDS 3309201 3310367 . + 0 ID=cds-WP_228329764.1;Parent=gene-LNP58_RS15715;Dbxref=Genbank:WP_228329764.1;Name=WP_228329764.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS15715;product=IS4 family transposase;protein_id=WP_228329764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3310455 3311774 . + . ID=gene-LNP58_RS15720;Name=LNP58_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15720;old_locus_tag=LNP58_15690 NZ_CP086372.1 Protein Homology CDS 3310455 3311774 . + 0 ID=cds-WP_228329661.1;Parent=gene-LNP58_RS15720;Dbxref=Genbank:WP_228329661.1;Name=WP_228329661.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS15720;product=IS701 family transposase;protein_id=WP_228329661.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3311865 3312056 . + . ID=gene-LNP58_RS15725;Name=LNP58_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15725;old_locus_tag=LNP58_15695 NZ_CP086372.1 GeneMarkS-2+ CDS 3311865 3312056 . + 0 ID=cds-WP_011259831.1;Parent=gene-LNP58_RS15725;Dbxref=Genbank:WP_011259831.1;Name=WP_011259831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15725;product=hypothetical protein;protein_id=WP_011259831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3312024 3313037 . - . ID=gene-LNP58_RS15730;Name=LNP58_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15730;old_locus_tag=LNP58_15700 NZ_CP086372.1 Protein Homology CDS 3312024 3313037 . - 0 ID=cds-WP_011409111.1;Parent=gene-LNP58_RS15730;Dbxref=Genbank:WP_011409111.1;Name=WP_011409111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502684.1;locus_tag=LNP58_RS15730;product=peptidylprolyl isomerase;protein_id=WP_011409111.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3313071 3313304 . - . ID=gene-LNP58_RS15735;Name=LNP58_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15735;old_locus_tag=LNP58_15705 NZ_CP086372.1 Protein Homology CDS 3313071 3313304 . - 0 ID=cds-WP_011259829.1;Parent=gene-LNP58_RS15735;Dbxref=Genbank:WP_011259829.1;Name=WP_011259829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051827.1;locus_tag=LNP58_RS15735;product=DUF378 domain-containing protein;protein_id=WP_011259829.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3314681 3315444 . - . ID=gene-LNP58_RS15740;Name=LNP58_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15740;old_locus_tag=LNP58_15710 NZ_CP086372.1 Protein Homology CDS 3315129 3315444 . - 0 ID=cds-WP_094187804.1-3;Parent=gene-LNP58_RS15740;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15740;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3314681 3315129 . - 2 ID=cds-WP_094187804.1-3;Parent=gene-LNP58_RS15740;Dbxref=Genbank:WP_094187804.1;Name=WP_094187804.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS15740;product=IS5 family transposase;protein_id=WP_094187804.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3315569 3316534 . + . ID=gene-LNP58_RS15745;Name=LNP58_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15745;old_locus_tag=LNP58_15715 NZ_CP086372.1 Protein Homology CDS 3315569 3316534 . + 0 ID=cds-WP_109181928.1-3;Parent=gene-LNP58_RS15745;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS15745;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3316834 3317283 . - . ID=gene-LNP58_RS15750;Name=LNP58_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15750;old_locus_tag=LNP58_15720 NZ_CP086372.1 Protein Homology CDS 3316834 3317283 . - 0 ID=cds-WP_011409108.1;Parent=gene-LNP58_RS15750;Dbxref=Genbank:WP_011409108.1;Name=WP_011409108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304338.1;locus_tag=LNP58_RS15750;product=DUF4442 domain-containing protein;protein_id=WP_011409108.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3317539 3318396 . - . ID=gene-LNP58_RS15755;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LNP58_RS15755;old_locus_tag=LNP58_15725 NZ_CP086372.1 Protein Homology CDS 3317539 3318396 . - 0 ID=cds-WP_011409107.1;Parent=gene-LNP58_RS15755;Dbxref=Genbank:WP_011409107.1;Name=WP_011409107.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919399.1;locus_tag=LNP58_RS15755;product=thioredoxin;protein_id=WP_011409107.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3318601 3319212 . + . ID=gene-LNP58_RS15760;Name=LNP58_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15760;old_locus_tag=LNP58_15730 NZ_CP086372.1 Protein Homology CDS 3318601 3319212 . + 0 ID=cds-WP_011259826.1;Parent=gene-LNP58_RS15760;Dbxref=Genbank:WP_011259826.1;Name=WP_011259826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502688.1;locus_tag=LNP58_RS15760;product=DUF998 domain-containing protein;protein_id=WP_011259826.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3319285 3321927 . + . ID=gene-LNP58_RS15765;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LNP58_RS15765;old_locus_tag=LNP58_15735 NZ_CP086372.1 Protein Homology CDS 3319285 3321927 . + 0 ID=cds-WP_011259825.1;Parent=gene-LNP58_RS15765;Dbxref=Genbank:WP_011259825.1;Name=WP_011259825.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972619.1;locus_tag=LNP58_RS15765;product=leucine--tRNA ligase;protein_id=WP_011259825.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3322441 3323076 . + . ID=gene-LNP58_RS15770;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LNP58_RS15770;old_locus_tag=LNP58_15740 NZ_CP086372.1 Protein Homology CDS 3322441 3323076 . + 0 ID=cds-WP_011409105.1;Parent=gene-LNP58_RS15770;Dbxref=Genbank:WP_011409105.1;Name=WP_011409105.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162628.1;locus_tag=LNP58_RS15770;product=LPS assembly lipoprotein LptE;protein_id=WP_011409105.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3323099 3324127 . + . ID=gene-LNP58_RS15775;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LNP58_RS15775;old_locus_tag=LNP58_15745 NZ_CP086372.1 Protein Homology CDS 3323099 3324127 . + 0 ID=cds-WP_011259823.1;Parent=gene-LNP58_RS15775;Dbxref=Genbank:WP_011259823.1;Name=WP_011259823.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116404.1;locus_tag=LNP58_RS15775;product=DNA polymerase III subunit delta;protein_id=WP_011259823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3324124 3325023 . + . ID=gene-LNP58_RS15780;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LNP58_RS15780;old_locus_tag=LNP58_15750 NZ_CP086372.1 Protein Homology CDS 3324124 3325023 . + 0 ID=cds-WP_011409104.1;Parent=gene-LNP58_RS15780;Dbxref=Genbank:WP_011409104.1;Name=WP_011409104.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157150.1;locus_tag=LNP58_RS15780;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_011409104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3325080 3325496 . + . ID=gene-LNP58_RS15785;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LNP58_RS15785;old_locus_tag=LNP58_15755 NZ_CP086372.1 Protein Homology CDS 3325080 3325496 . + 0 ID=cds-WP_011259822.1;Parent=gene-LNP58_RS15785;Dbxref=Genbank:WP_011259822.1;Name=WP_011259822.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259822.1;locus_tag=LNP58_RS15785;product=ribosome silencing factor;protein_id=WP_011259822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3325556 3326623 . + . ID=gene-LNP58_RS15790;Name=LNP58_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15790;old_locus_tag=LNP58_15760 NZ_CP086372.1 Protein Homology CDS 3325556 3326623 . + 0 ID=cds-WP_229001902.1;Parent=gene-LNP58_RS15790;Dbxref=Genbank:WP_229001902.1;Name=WP_229001902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449945.1;locus_tag=LNP58_RS15790;product=J domain-containing protein;protein_id=WP_229001902.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3326949 3327128 . - . ID=gene-LNP58_RS15795;Name=LNP58_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15795;old_locus_tag=LNP58_15765 NZ_CP086372.1 Protein Homology CDS 3326949 3327128 . - 0 ID=cds-WP_012445580.1;Parent=gene-LNP58_RS15795;Dbxref=Genbank:WP_012445580.1;Name=WP_012445580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017591.2;locus_tag=LNP58_RS15795;product=DUF839 domain-containing protein;protein_id=WP_012445580.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3327136 3327591 . - . ID=gene-LNP58_RS15800;Name=LNP58_RS15800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15800;old_locus_tag=LNP58_15770;partial=true;pseudo=true;start_range=.,3327136 NZ_CP086372.1 Protein Homology CDS 3327136 3327591 . - 0 ID=cds-LNP58_RS15800;Parent=gene-LNP58_RS15800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933077.1;locus_tag=LNP58_RS15800;partial=true;product=DUF839 domain-containing protein;pseudo=true;start_range=.,3327136;transl_table=11 NZ_CP086372.1 RefSeq gene 3327713 3328183 . + . ID=gene-LNP58_RS15805;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LNP58_RS15805;old_locus_tag=LNP58_15775 NZ_CP086372.1 Protein Homology CDS 3327713 3328183 . + 0 ID=cds-WP_011409102.1;Parent=gene-LNP58_RS15805;Dbxref=Genbank:WP_011409102.1;Name=WP_011409102.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301047.1;locus_tag=LNP58_RS15805;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011409102.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3328257 3328332 . - . ID=gene-LNP58_RS15810;Name=LNP58_RS15810;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15810;old_locus_tag=LNP58_15780 NZ_CP086372.1 cmsearch ncRNA 3328257 3328332 . - . ID=rna-LNP58_RS15810;Parent=gene-LNP58_RS15810;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15810;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3328257 3328332 . - . ID=exon-LNP58_RS15810-1;Parent=rna-LNP58_RS15810;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15810;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 3328619 3329222 . - . ID=gene-LNP58_RS15815;Name=LNP58_RS15815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15815;old_locus_tag=LNP58_15785;pseudo=true NZ_CP086372.1 Protein Homology CDS 3328619 3329222 . - 0 ID=cds-LNP58_RS15815;Parent=gene-LNP58_RS15815;Note=frameshifted;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163037.1;locus_tag=LNP58_RS15815;product=TonB family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3329602 3332715 . - . ID=gene-LNP58_RS15820;Name=LNP58_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15820;old_locus_tag=LNP58_15790 NZ_CP086372.1 Protein Homology CDS 3329602 3332715 . - 0 ID=cds-WP_011409100.1;Parent=gene-LNP58_RS15820;Dbxref=Genbank:WP_011409100.1;Name=WP_011409100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377546.1;locus_tag=LNP58_RS15820;product=TonB-dependent receptor;protein_id=WP_011409100.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3332863 3332940 . - . ID=gene-LNP58_RS15825;Name=LNP58_RS15825;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS15825;old_locus_tag=LNP58_15795 NZ_CP086372.1 cmsearch ncRNA 3332863 3332940 . - . ID=rna-LNP58_RS15825;Parent=gene-LNP58_RS15825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15825;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3332863 3332940 . - . ID=exon-LNP58_RS15825-1;Parent=rna-LNP58_RS15825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS15825;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3333187 3333921 . - . ID=gene-LNP58_RS15830;Name=LNP58_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15830;old_locus_tag=LNP58_15800 NZ_CP086372.1 Protein Homology CDS 3333187 3333921 . - 0 ID=cds-WP_011409099.1;Parent=gene-LNP58_RS15830;Dbxref=Genbank:WP_011409099.1;Name=WP_011409099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302808.1;locus_tag=LNP58_RS15830;product=SIMPL domain-containing protein;protein_id=WP_011409099.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3334060 3334632 . + . ID=gene-LNP58_RS15835;Name=LNP58_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15835;old_locus_tag=LNP58_15805 NZ_CP086372.1 Protein Homology CDS 3334060 3334632 . + 0 ID=cds-WP_011409098.1;Parent=gene-LNP58_RS15835;Dbxref=Genbank:WP_011409098.1;Name=WP_011409098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117854.1;locus_tag=LNP58_RS15835;product=Maf-like protein;protein_id=WP_011409098.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3334632 3336137 . + . ID=gene-LNP58_RS15840;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LNP58_RS15840;old_locus_tag=LNP58_15810 NZ_CP086372.1 Protein Homology CDS 3334632 3336137 . + 0 ID=cds-WP_075242241.1;Parent=gene-LNP58_RS15840;Dbxref=Genbank:WP_075242241.1;Name=WP_075242241.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802933.1;locus_tag=LNP58_RS15840;product=ribonuclease G;protein_id=WP_075242241.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3336271 3340191 . + . ID=gene-LNP58_RS15845;Name=LNP58_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15845;old_locus_tag=LNP58_15815 NZ_CP086372.1 Protein Homology CDS 3336271 3340191 . + 0 ID=cds-WP_075242240.1;Parent=gene-LNP58_RS15845;Dbxref=Genbank:WP_075242240.1;Name=WP_075242240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051814.1;locus_tag=LNP58_RS15845;product=YhdP family protein;protein_id=WP_075242240.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3340197 3340949 . - . ID=gene-LNP58_RS15850;Name=LNP58_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15850;old_locus_tag=LNP58_15820 NZ_CP086372.1 Protein Homology CDS 3340197 3340949 . - 0 ID=cds-WP_075242242.1;Parent=gene-LNP58_RS15850;Dbxref=Genbank:WP_075242242.1;Name=WP_075242242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919426.1;locus_tag=LNP58_RS15850;product=DUF6065 family protein;protein_id=WP_075242242.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3341048 3342493 . + . ID=gene-LNP58_RS15855;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LNP58_RS15855;old_locus_tag=LNP58_15825 NZ_CP086372.1 Protein Homology CDS 3341048 3342493 . + 0 ID=cds-WP_011259808.1;Parent=gene-LNP58_RS15855;Dbxref=Genbank:WP_011259808.1;Name=WP_011259808.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972594.1;locus_tag=LNP58_RS15855;product=metalloprotease TldD;protein_id=WP_011259808.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3342750 3343331 . - . ID=gene-LNP58_RS15860;Name=LNP58_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15860;old_locus_tag=LNP58_15830 NZ_CP086372.1 Protein Homology CDS 3342750 3343331 . - 0 ID=cds-WP_011409095.1;Parent=gene-LNP58_RS15860;Dbxref=Genbank:WP_011409095.1;Name=WP_011409095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156395.1;locus_tag=LNP58_RS15860;product=ribosome-associated protein;protein_id=WP_011409095.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3343477 3344844 . + . ID=gene-LNP58_RS15865;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LNP58_RS15865;old_locus_tag=LNP58_15835 NZ_CP086372.1 Protein Homology CDS 3343477 3344844 . + 0 ID=cds-WP_014502704.1;Parent=gene-LNP58_RS15865;Dbxref=Genbank:WP_014502704.1;Name=WP_014502704.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019662101.1;locus_tag=LNP58_RS15865;product=metalloprotease PmbA;protein_id=WP_014502704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3344841 3345161 . + . ID=gene-LNP58_RS15870;Name=LNP58_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15870;old_locus_tag=LNP58_15840 NZ_CP086372.1 GeneMarkS-2+ CDS 3344841 3345161 . + 0 ID=cds-WP_069963878.1;Parent=gene-LNP58_RS15870;Dbxref=Genbank:WP_069963878.1;Name=WP_069963878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15870;product=hypothetical protein;protein_id=WP_069963878.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3345158 3345322 . + . ID=gene-LNP58_RS15875;Name=LNP58_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15875;old_locus_tag=LNP58_15845 NZ_CP086372.1 Protein Homology CDS 3345158 3345322 . + 0 ID=cds-WP_228329765.1;Parent=gene-LNP58_RS15875;Dbxref=Genbank:WP_228329765.1;Name=WP_228329765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502706.1;locus_tag=LNP58_RS15875;product=DUF4870 domain-containing protein;protein_id=WP_228329765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3345374 3345838 . + . ID=gene-LNP58_RS15880;Name=LNP58_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15880;old_locus_tag=LNP58_15850 NZ_CP086372.1 Protein Homology CDS 3345374 3345838 . + 0 ID=cds-WP_027704198.1;Parent=gene-LNP58_RS15880;Dbxref=Genbank:WP_027704198.1;Name=WP_027704198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112466.1;locus_tag=LNP58_RS15880;product=DUF4870 domain-containing protein;protein_id=WP_027704198.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3345908 3347001 . - . ID=gene-LNP58_RS15885;Name=LNP58_RS15885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15885;old_locus_tag=LNP58_15855;pseudo=true NZ_CP086372.1 Protein Homology CDS 3345908 3347001 . - 0 ID=cds-LNP58_RS15885;Parent=gene-LNP58_RS15885;Note=frameshifted;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508287.1;locus_tag=LNP58_RS15885;product=M35 family metallo-endopeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3347685 3348560 . - . ID=gene-LNP58_RS15890;Name=LNP58_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15890;old_locus_tag=LNP58_15860 NZ_CP086372.1 Protein Homology CDS 3347685 3348560 . - 0 ID=cds-WP_075242285.1;Parent=gene-LNP58_RS15890;Dbxref=Genbank:WP_075242285.1;Name=WP_075242285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174296.1;locus_tag=LNP58_RS15890;product=polyprenyl synthetase family protein;protein_id=WP_075242285.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3348562 3348822 . - . ID=gene-LNP58_RS15895;Name=LNP58_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15895;old_locus_tag=LNP58_15865 NZ_CP086372.1 Protein Homology CDS 3348562 3348822 . - 0 ID=cds-WP_011259802.1;Parent=gene-LNP58_RS15895;Dbxref=Genbank:WP_011259802.1;Name=WP_011259802.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159976.1;locus_tag=LNP58_RS15895;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011259802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3348854 3350158 . - . ID=gene-LNP58_RS15900;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LNP58_RS15900;old_locus_tag=LNP58_15870 NZ_CP086372.1 Protein Homology CDS 3348854 3350158 . - 0 ID=cds-WP_044756614.1;Parent=gene-LNP58_RS15900;Dbxref=Genbank:WP_044756614.1;Name=WP_044756614.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090562.1;locus_tag=LNP58_RS15900;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_044756614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3350192 3351898 . - . ID=gene-LNP58_RS15905;Name=LNP58_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15905;old_locus_tag=LNP58_15875 NZ_CP086372.1 Protein Homology CDS 3350192 3351898 . - 0 ID=cds-WP_011259800.1;Parent=gene-LNP58_RS15905;Dbxref=Genbank:WP_011259800.1;Name=WP_011259800.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502713.1;locus_tag=LNP58_RS15905;product=alkaline phosphatase;protein_id=WP_011259800.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3352042 3353383 . + . ID=gene-LNP58_RS15910;Name=LNP58_RS15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15910;old_locus_tag=LNP58_15880;pseudo=true NZ_CP086372.1 Protein Homology CDS 3352042 3353383 . + 0 ID=cds-LNP58_RS15910;Parent=gene-LNP58_RS15910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300949.1;locus_tag=LNP58_RS15910;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3353393 3354228 . + . ID=gene-LNP58_RS15915;Name=LNP58_RS15915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15915;old_locus_tag=LNP58_15885;pseudo=true NZ_CP086372.1 Protein Homology CDS 3353393 3354228 . + 0 ID=cds-LNP58_RS15915;Parent=gene-LNP58_RS15915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112463.1;locus_tag=LNP58_RS15915;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3354235 3354462 . + . ID=gene-LNP58_RS15920;Name=LNP58_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15920;old_locus_tag=LNP58_15890 NZ_CP086372.1 GeneMarkS-2+ CDS 3354235 3354462 . + 0 ID=cds-WP_125168763.1;Parent=gene-LNP58_RS15920;Dbxref=Genbank:WP_125168763.1;Name=WP_125168763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS15920;product=hypothetical protein;protein_id=WP_125168763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3354475 3354966 . + . ID=gene-LNP58_RS15925;Name=LNP58_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15925;old_locus_tag=LNP58_15895 NZ_CP086372.1 Protein Homology CDS 3354475 3354966 . + 0 ID=cds-WP_011259797.1;Parent=gene-LNP58_RS15925;Dbxref=Genbank:WP_011259797.1;Name=WP_011259797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259797.1;locus_tag=LNP58_RS15925;product=acyl-CoA thioesterase;protein_id=WP_011259797.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3355174 3355923 . - . ID=gene-LNP58_RS15930;Name=LNP58_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15930;old_locus_tag=LNP58_15900 NZ_CP086372.1 Protein Homology CDS 3355174 3355923 . - 0 ID=cds-WP_011259796.1;Parent=gene-LNP58_RS15930;Dbxref=Genbank:WP_011259796.1;Name=WP_011259796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437923.1;locus_tag=LNP58_RS15930;product=C40 family peptidase;protein_id=WP_011259796.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3356033 3356569 . - . ID=gene-LNP58_RS15935;Name=LNP58_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15935;old_locus_tag=LNP58_15905 NZ_CP086372.1 Protein Homology CDS 3356033 3356569 . - 0 ID=cds-WP_027704197.1;Parent=gene-LNP58_RS15935;Dbxref=Genbank:WP_027704197.1;Name=WP_027704197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156384.1;locus_tag=LNP58_RS15935;product=C40 family peptidase;protein_id=WP_027704197.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3356680 3357159 . + . ID=gene-LNP58_RS15940;Name=LNP58_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15940;old_locus_tag=LNP58_15910 NZ_CP086372.1 Protein Homology CDS 3356680 3357159 . + 0 ID=cds-WP_011259794.1;Parent=gene-LNP58_RS15940;Dbxref=Genbank:WP_011259794.1;Name=WP_011259794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903985.1;locus_tag=LNP58_RS15940;product=peptidylprolyl isomerase;protein_id=WP_011259794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3357387 3358631 . + . ID=gene-LNP58_RS15945;Name=LNP58_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15945;old_locus_tag=LNP58_15915 NZ_CP086372.1 Protein Homology CDS 3357387 3358631 . + 0 ID=cds-WP_011409085.1;Parent=gene-LNP58_RS15945;Dbxref=Genbank:WP_011409085.1;Name=WP_011409085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486872.1;locus_tag=LNP58_RS15945;product=DUF418 domain-containing protein;protein_id=WP_011409085.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3358639 3359889 . + . ID=gene-LNP58_RS15950;Name=LNP58_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15950;old_locus_tag=LNP58_15920 NZ_CP086372.1 Protein Homology CDS 3358639 3359889 . + 0 ID=cds-WP_011409084.1;Parent=gene-LNP58_RS15950;Dbxref=Genbank:WP_011409084.1;Name=WP_011409084.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377592.1;locus_tag=LNP58_RS15950;product=FAD-dependent oxidoreductase;protein_id=WP_011409084.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3359886 3361081 . + . ID=gene-LNP58_RS15955;Name=LNP58_RS15955;end_range=3361081,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15955;old_locus_tag=LNP58_15925;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3359886 3361081 . + 0 ID=cds-LNP58_RS15955;Parent=gene-LNP58_RS15955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;end_range=3361081,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486876.1;locus_tag=LNP58_RS15955;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3361173 3362135 . + . ID=gene-LNP58_RS15960;Name=LNP58_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15960;old_locus_tag=LNP58_15930 NZ_CP086372.1 Protein Homology CDS 3361173 3362135 . + 0 ID=cds-WP_011409082.1;Parent=gene-LNP58_RS15960;Dbxref=Genbank:WP_011409082.1;Name=WP_011409082.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=LNP58_RS15960;product=IS1595 family transposase;protein_id=WP_011409082.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3362153 3362332 . + . ID=gene-LNP58_RS15965;Name=LNP58_RS15965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15965;old_locus_tag=LNP58_15935;partial=true;pseudo=true;start_range=.,3362153 NZ_CP086372.1 Protein Homology CDS 3362153 3362332 . + 0 ID=cds-LNP58_RS15965;Parent=gene-LNP58_RS15965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486876.1;locus_tag=LNP58_RS15965;partial=true;product=glutathione-disulfide reductase;pseudo=true;start_range=.,3362153;transl_table=11 NZ_CP086372.1 RefSeq gene 3362573 3362980 . + . ID=gene-LNP58_RS15970;Name=LNP58_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15970;old_locus_tag=LNP58_15940 NZ_CP086372.1 Protein Homology CDS 3362573 3362980 . + 0 ID=cds-WP_011409081.1;Parent=gene-LNP58_RS15970;Dbxref=Genbank:WP_011409081.1;Name=WP_011409081.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051802.1;locus_tag=LNP58_RS15970;product=MGMT family protein;protein_id=WP_011409081.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3363021 3363719 . + . ID=gene-LNP58_RS15975;Name=LNP58_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15975;old_locus_tag=LNP58_15945 NZ_CP086372.1 Protein Homology CDS 3363021 3363719 . + 0 ID=cds-WP_012445555.1;Parent=gene-LNP58_RS15975;Dbxref=Genbank:WP_012445555.1;Name=WP_012445555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169516.1;locus_tag=LNP58_RS15975;product=rhomboid family intramembrane serine protease;protein_id=WP_012445555.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3363990 3366005 . - . ID=gene-LNP58_RS15980;Name=LNP58_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS15980;old_locus_tag=LNP58_15950 NZ_CP086372.1 Protein Homology CDS 3363990 3366005 . - 0 ID=cds-WP_011259787.1;Parent=gene-LNP58_RS15980;Dbxref=Genbank:WP_011259787.1;Name=WP_011259787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969573.1;locus_tag=LNP58_RS15980;product=M13 family metallopeptidase;protein_id=WP_011259787.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3366230 3366925 . + . ID=gene-LNP58_RS15985;Name=LNP58_RS15985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS15985;old_locus_tag=LNP58_15955;partial=true;pseudo=true;start_range=.,3366230 NZ_CP086372.1 Protein Homology CDS 3366230 3366925 . + 0 ID=cds-LNP58_RS15985;Parent=gene-LNP58_RS15985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS15985;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,3366230;transl_table=11 NZ_CP086372.1 RefSeq gene 3367393 3368244 . + . ID=gene-LNP58_RS15990;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LNP58_RS15990;old_locus_tag=LNP58_15960 NZ_CP086372.1 Protein Homology CDS 3367393 3368244 . + 0 ID=cds-WP_011259785.1;Parent=gene-LNP58_RS15990;Dbxref=Genbank:WP_011259785.1;Name=WP_011259785.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156372.1;locus_tag=LNP58_RS15990;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_011259785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3368337 3368906 . + . ID=gene-LNP58_RS15995;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LNP58_RS15995;old_locus_tag=LNP58_15965 NZ_CP086372.1 Protein Homology CDS 3368337 3368906 . + 0 ID=cds-WP_011259784.1;Parent=gene-LNP58_RS15995;Dbxref=Genbank:WP_011259784.1;Name=WP_011259784.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=LNP58_RS15995;product=dCTP deaminase;protein_id=WP_011259784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3368941 3369126 . - . ID=gene-LNP58_RS16000;Name=LNP58_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16000;old_locus_tag=LNP58_15970 NZ_CP086372.1 Protein Homology CDS 3368941 3369126 . - 0 ID=cds-WP_011259783.1;Parent=gene-LNP58_RS16000;Dbxref=Genbank:WP_011259783.1;Name=WP_011259783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486896.1;locus_tag=LNP58_RS16000;product=DUF5668 domain-containing protein;protein_id=WP_011259783.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3369805 3369972 . - . ID=gene-LNP58_RS16005;Name=LNP58_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16005;old_locus_tag=LNP58_15975 NZ_CP086372.1 Protein Homology CDS 3369805 3369972 . - 0 ID=cds-WP_011259782.1;Parent=gene-LNP58_RS16005;Dbxref=Genbank:WP_011259782.1;Name=WP_011259782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259782.1;locus_tag=LNP58_RS16005;product=DUF5668 domain-containing protein;protein_id=WP_011259782.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3370000 3370434 . - . ID=gene-LNP58_RS16010;Name=LNP58_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16010;old_locus_tag=LNP58_15980 NZ_CP086372.1 Protein Homology CDS 3370000 3370434 . - 0 ID=cds-WP_011409078.1;Parent=gene-LNP58_RS16010;Dbxref=Genbank:WP_011409078.1;Name=WP_011409078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503835.1;locus_tag=LNP58_RS16010;product=HIT family protein;protein_id=WP_011409078.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3370431 3371092 . - . ID=gene-LNP58_RS16015;Name=LNP58_RS16015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16015;old_locus_tag=LNP58_15985;pseudo=true NZ_CP086372.1 Protein Homology CDS 3370431 3371092 . - 0 ID=cds-LNP58_RS16015;Parent=gene-LNP58_RS16015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302061.1;locus_tag=LNP58_RS16015;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3371269 3372669 . + . ID=gene-LNP58_RS16020;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LNP58_RS16020;old_locus_tag=LNP58_15990 NZ_CP086372.1 Protein Homology CDS 3371269 3372669 . + 0 ID=cds-WP_044756621.1;Parent=gene-LNP58_RS16020;Dbxref=Genbank:WP_044756621.1;Name=WP_044756621.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259780.1;locus_tag=LNP58_RS16020;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_044756621.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3372791 3373297 . - . ID=gene-LNP58_RS16025;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LNP58_RS16025;old_locus_tag=LNP58_15995 NZ_CP086372.1 Protein Homology CDS 3372791 3373297 . - 0 ID=cds-WP_029217681.1;Parent=gene-LNP58_RS16025;Dbxref=Genbank:WP_029217681.1;Name=WP_029217681.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409076.1;locus_tag=LNP58_RS16025;product=transcription elongation factor GreB;protein_id=WP_029217681.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3373408 3374135 . + . ID=gene-LNP58_RS16030;Name=LNP58_RS16030;end_range=3374135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16030;old_locus_tag=LNP58_16000;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3373408 3374135 . + 0 ID=cds-LNP58_RS16030;Parent=gene-LNP58_RS16030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3374135,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156366.1;locus_tag=LNP58_RS16030;partial=true;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3374225 3375076 . + . ID=gene-LNP58_RS16035;Name=LNP58_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16035;old_locus_tag=LNP58_16005 NZ_CP086372.1 Protein Homology CDS 3374225 3375076 . + 0 ID=cds-WP_228329662.1;Parent=gene-LNP58_RS16035;Dbxref=Genbank:WP_228329662.1;Name=WP_228329662.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS16035;product=IS30 family transposase;protein_id=WP_228329662.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3375109 3375767 . + . ID=gene-LNP58_RS16040;Name=LNP58_RS16040;end_range=3375767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16040;old_locus_tag=LNP58_16010;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3375109 3375767 . + 0 ID=cds-LNP58_RS16040;Parent=gene-LNP58_RS16040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3375767,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS16040;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3375669 3375992 . - . ID=gene-LNP58_RS16045;Name=LNP58_RS16045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16045;old_locus_tag=LNP58_16015;partial=true;pseudo=true;start_range=.,3375669 NZ_CP086372.1 Protein Homology CDS 3375669 3375992 . - 0 ID=cds-LNP58_RS16045;Parent=gene-LNP58_RS16045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347958.1;locus_tag=LNP58_RS16045;partial=true;product=DUF853 family protein;pseudo=true;start_range=.,3375669;transl_table=11 NZ_CP086372.1 RefSeq gene 3376287 3377870 . + . ID=gene-LNP58_RS16050;Name=LNP58_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16050;old_locus_tag=LNP58_16020 NZ_CP086372.1 Protein Homology CDS 3376287 3377870 . + 0 ID=cds-WP_041182211.1;Parent=gene-LNP58_RS16050;Dbxref=Genbank:WP_041182211.1;Name=WP_041182211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914309.1;locus_tag=LNP58_RS16050;product=transglycosylase SLT domain-containing protein;protein_id=WP_041182211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3378277 3378352 . + . ID=gene-LNP58_RS16055;Name=LNP58_RS16055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS16055;old_locus_tag=LNP58_16025 NZ_CP086372.1 cmsearch ncRNA 3378277 3378352 . + . ID=rna-LNP58_RS16055;Parent=gene-LNP58_RS16055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16055;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3378277 3378352 . + . ID=exon-LNP58_RS16055-1;Parent=rna-LNP58_RS16055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16055;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3378421 3379269 . - . ID=gene-LNP58_RS16060;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LNP58_RS16060;old_locus_tag=LNP58_16030 NZ_CP086372.1 Protein Homology CDS 3378421 3379269 . - 0 ID=cds-WP_027703264.1;Parent=gene-LNP58_RS16060;Dbxref=Genbank:WP_027703264.1;Name=WP_027703264.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409071.1;locus_tag=LNP58_RS16060;product=archaetidylserine decarboxylase;protein_id=WP_027703264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3379266 3379916 . - . ID=gene-LNP58_RS16065;Name=LNP58_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16065;old_locus_tag=LNP58_16035 NZ_CP086372.1 Protein Homology CDS 3379266 3379916 . - 0 ID=cds-WP_011259773.1;Parent=gene-LNP58_RS16065;Dbxref=Genbank:WP_011259773.1;Name=WP_011259773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302734.1;locus_tag=LNP58_RS16065;product=SCO family protein;protein_id=WP_011259773.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3379997 3380923 . + . ID=gene-LNP58_RS16070;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LNP58_RS16070;old_locus_tag=LNP58_16040 NZ_CP086372.1 Protein Homology CDS 3379997 3380923 . + 0 ID=cds-WP_011259772.1;Parent=gene-LNP58_RS16070;Dbxref=Genbank:WP_011259772.1;Name=WP_011259772.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927455.1;locus_tag=LNP58_RS16070;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_011259772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3380934 3382037 . + . ID=gene-LNP58_RS16075;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LNP58_RS16075;old_locus_tag=LNP58_16045 NZ_CP086372.1 Protein Homology CDS 3380934 3382037 . + 0 ID=cds-WP_011259771.1;Parent=gene-LNP58_RS16075;Dbxref=Genbank:WP_011259771.1;Name=WP_011259771.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914304.1;locus_tag=LNP58_RS16075;product=chorismate synthase;protein_id=WP_011259771.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3382030 3383103 . + . ID=gene-LNP58_RS16080;Name=LNP58_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16080;old_locus_tag=LNP58_16050 NZ_CP086372.1 Protein Homology CDS 3382030 3383103 . + 0 ID=cds-WP_011409070.1;Parent=gene-LNP58_RS16080;Dbxref=Genbank:WP_011409070.1;Name=WP_011409070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379384.1;locus_tag=LNP58_RS16080;product=D-glycerate dehydrogenase;protein_id=WP_011409070.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3383188 3384213 . + . ID=gene-LNP58_RS16085;Name=LNP58_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16085;old_locus_tag=LNP58_16055 NZ_CP086372.1 Protein Homology CDS 3383188 3384213 . + 0 ID=cds-WP_011259769.1;Parent=gene-LNP58_RS16085;Dbxref=Genbank:WP_011259769.1;Name=WP_011259769.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437949.1;locus_tag=LNP58_RS16085;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_011259769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3384272 3384347 . + . ID=gene-LNP58_RS16090;Name=LNP58_RS16090;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS16090;old_locus_tag=LNP58_16060 NZ_CP086372.1 cmsearch ncRNA 3384272 3384347 . + . ID=rna-LNP58_RS16090;Parent=gene-LNP58_RS16090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16090;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3384272 3384347 . + . ID=exon-LNP58_RS16090-1;Parent=rna-LNP58_RS16090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16090;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3384894 3386846 . + . ID=gene-LNP58_RS16095;Name=LNP58_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16095;old_locus_tag=LNP58_16065 NZ_CP086372.1 Protein Homology CDS 3384894 3386846 . + 0 ID=cds-WP_075242327.1;Parent=gene-LNP58_RS16095;Dbxref=Genbank:WP_075242327.1;Name=WP_075242327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113385.1;locus_tag=LNP58_RS16095;product=ferrous iron transporter B;protein_id=WP_075242327.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3386843 3387250 . + . ID=gene-LNP58_RS16100;Name=LNP58_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16100;old_locus_tag=LNP58_16070 NZ_CP086372.1 Protein Homology CDS 3386843 3387250 . + 0 ID=cds-WP_053502465.1;Parent=gene-LNP58_RS16100;Dbxref=Genbank:WP_053502465.1;Name=WP_053502465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167422.1;locus_tag=LNP58_RS16100;product=VOC family protein;protein_id=WP_053502465.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3387420 3388193 . + . ID=gene-LNP58_RS16105;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LNP58_RS16105;old_locus_tag=LNP58_16075 NZ_CP086372.1 Protein Homology CDS 3387420 3388193 . + 0 ID=cds-WP_053502464.1;Parent=gene-LNP58_RS16105;Dbxref=Genbank:WP_053502464.1;Name=WP_053502464.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304909.1;locus_tag=LNP58_RS16105;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_053502464.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3388190 3388858 . + . ID=gene-LNP58_RS16110;Name=LNP58_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16110;old_locus_tag=LNP58_16080 NZ_CP086372.1 Protein Homology CDS 3388190 3388858 . + 0 ID=cds-WP_011259764.1;Parent=gene-LNP58_RS16110;Dbxref=Genbank:WP_011259764.1;Name=WP_011259764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159966.1;locus_tag=LNP58_RS16110;product=phosphoribosylanthranilate isomerase;protein_id=WP_011259764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3389262 3390188 . - . ID=gene-LNP58_RS16115;Name=LNP58_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16115;old_locus_tag=LNP58_16085 NZ_CP086372.1 Protein Homology CDS 3389262 3390188 . - 0 ID=cds-WP_069964811.1;Parent=gene-LNP58_RS16115;Dbxref=Genbank:WP_069964811.1;Name=WP_069964811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162800.1;locus_tag=LNP58_RS16115;product=LysR family transcriptional regulator;protein_id=WP_069964811.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3390294 3391511 . + . ID=gene-LNP58_RS16120;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LNP58_RS16120;old_locus_tag=LNP58_16090 NZ_CP086372.1 Protein Homology CDS 3390294 3391511 . + 0 ID=cds-WP_044756624.1;Parent=gene-LNP58_RS16120;Dbxref=Genbank:WP_044756624.1;Name=WP_044756624.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914297.1;locus_tag=LNP58_RS16120;product=tryptophan synthase subunit beta;protein_id=WP_044756624.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3391556 3391908 . + . ID=gene-LNP58_RS16125;Name=LNP58_RS16125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16125;old_locus_tag=LNP58_16095;pseudo=true NZ_CP086372.1 Protein Homology CDS 3391556 3391908 . + 0 ID=cds-LNP58_RS16125;Parent=gene-LNP58_RS16125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570955.1;locus_tag=LNP58_RS16125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3391957 3392763 . + . ID=gene-LNP58_RS16130;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LNP58_RS16130;old_locus_tag=LNP58_16100 NZ_CP086372.1 Protein Homology CDS 3391957 3392763 . + 0 ID=cds-WP_011409067.1;Parent=gene-LNP58_RS16130;Dbxref=Genbank:WP_011409067.1;Name=WP_011409067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503808.1;locus_tag=LNP58_RS16130;product=tryptophan synthase subunit alpha;protein_id=WP_011409067.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3393083 3393970 . + . ID=gene-LNP58_RS16135;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LNP58_RS16135;old_locus_tag=LNP58_16105 NZ_CP086372.1 Protein Homology CDS 3393083 3393970 . + 0 ID=cds-WP_011259760.1;Parent=gene-LNP58_RS16135;Dbxref=Genbank:WP_011259760.1;Name=WP_011259760.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366658.1;locus_tag=LNP58_RS16135;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_011259760.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3393967 3395316 . + . ID=gene-LNP58_RS16140;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LNP58_RS16140;old_locus_tag=LNP58_16110 NZ_CP086372.1 Protein Homology CDS 3393967 3395316 . + 0 ID=cds-WP_075242328.1;Parent=gene-LNP58_RS16140;Dbxref=Genbank:WP_075242328.1;Name=WP_075242328.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300396.1;locus_tag=LNP58_RS16140;product=phosphoglucosamine mutase;protein_id=WP_075242328.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3395439 3396377 . + . ID=gene-LNP58_RS16145;Name=LNP58_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16145;old_locus_tag=LNP58_16115 NZ_CP086372.1 Protein Homology CDS 3395439 3396377 . + 0 ID=cds-WP_011259758.1;Parent=gene-LNP58_RS16145;Dbxref=Genbank:WP_011259758.1;Name=WP_011259758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485523.1;locus_tag=LNP58_RS16145;product=isopenicillin N synthase family oxygenase;protein_id=WP_011259758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3396587 3397261 . + . ID=gene-LNP58_RS16150;Name=LNP58_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16150;old_locus_tag=LNP58_16120 NZ_CP086372.1 Protein Homology CDS 3396587 3397261 . + 0 ID=cds-WP_011409066.1;Parent=gene-LNP58_RS16150;Dbxref=Genbank:WP_011409066.1;Name=WP_011409066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485525.1;locus_tag=LNP58_RS16150;product=hypothetical protein;protein_id=WP_011409066.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3397258 3399624 . + . ID=gene-LNP58_RS16155;Name=LNP58_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16155;old_locus_tag=LNP58_16125 NZ_CP086372.1 Protein Homology CDS 3397258 3399624 . + 0 ID=cds-WP_011259756.1;Parent=gene-LNP58_RS16155;Dbxref=Genbank:WP_011259756.1;Name=WP_011259756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973623.1;locus_tag=LNP58_RS16155;product=EAL domain-containing protein;protein_id=WP_011259756.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3399704 3400490 . - . ID=gene-LNP58_RS16160;Name=LNP58_RS16160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16160;old_locus_tag=LNP58_16130;partial=true;pseudo=true;start_range=.,3399704 NZ_CP086372.1 Protein Homology CDS 3399704 3400490 . - 0 ID=cds-LNP58_RS16160;Parent=gene-LNP58_RS16160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1;locus_tag=LNP58_RS16160;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,3399704;transl_table=11 NZ_CP086372.1 RefSeq gene 3400648 3401411 . + . ID=gene-LNP58_RS16165;Name=LNP58_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16165;old_locus_tag=LNP58_16135 NZ_CP086372.1 Protein Homology CDS 3400648 3400963 . + 0 ID=cds-WP_094187736.1-3;Parent=gene-LNP58_RS16165;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS16165;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3400963 3401411 . + 2 ID=cds-WP_094187736.1-3;Parent=gene-LNP58_RS16165;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS16165;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3401478 3401576 . + . ID=gene-LNP58_RS16170;Name=LNP58_RS16170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16170;old_locus_tag=LNP58_16140;partial=true;pseudo=true;start_range=.,3401478 NZ_CP086372.1 Protein Homology CDS 3401478 3401576 . + 0 ID=cds-LNP58_RS16170;Parent=gene-LNP58_RS16170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156087.1;locus_tag=LNP58_RS16170;partial=true;product=DUF3034 family protein;pseudo=true;start_range=.,3401478;transl_table=11 NZ_CP086372.1 RefSeq gene 3401576 3402004 . + . ID=gene-LNP58_RS16175;Name=LNP58_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16175;old_locus_tag=LNP58_16145 NZ_CP086372.1 Protein Homology CDS 3401576 3402004 . + 0 ID=cds-WP_011409063.1;Parent=gene-LNP58_RS16175;Dbxref=Genbank:WP_011409063.1;Name=WP_011409063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810241.1;locus_tag=LNP58_RS16175;product=group 1 truncated hemoglobin;protein_id=WP_011409063.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3402087 3402163 . - . ID=gene-LNP58_RS16180;Name=LNP58_RS16180;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS16180;old_locus_tag=LNP58_16150 NZ_CP086372.1 cmsearch ncRNA 3402087 3402163 . - . ID=rna-LNP58_RS16180;Parent=gene-LNP58_RS16180;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16180;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3402087 3402163 . - . ID=exon-LNP58_RS16180-1;Parent=rna-LNP58_RS16180;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16180;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3402354 3403154 . - . ID=gene-LNP58_RS16185;Name=LNP58_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16185;old_locus_tag=LNP58_16155 NZ_CP086372.1 Protein Homology CDS 3402354 3403154 . - 0 ID=cds-WP_011409062.1;Parent=gene-LNP58_RS16185;Dbxref=Genbank:WP_011409062.1;Name=WP_011409062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570965.1;locus_tag=LNP58_RS16185;product=SDR family oxidoreductase;protein_id=WP_011409062.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3403267 3404022 . + . ID=gene-LNP58_RS16190;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LNP58_RS16190;old_locus_tag=LNP58_16160 NZ_CP086372.1 Protein Homology CDS 3403267 3404022 . + 0 ID=cds-WP_011409061.1;Parent=gene-LNP58_RS16190;Dbxref=Genbank:WP_011409061.1;Name=WP_011409061.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156090.1;locus_tag=LNP58_RS16190;product=triose-phosphate isomerase;protein_id=WP_011409061.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3404056 3404517 . + . ID=gene-LNP58_RS16195;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LNP58_RS16195;old_locus_tag=LNP58_16165 NZ_CP086372.1 Protein Homology CDS 3404056 3404517 . + 0 ID=cds-WP_011259752.1;Parent=gene-LNP58_RS16195;Dbxref=Genbank:WP_011259752.1;Name=WP_011259752.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570967.1;locus_tag=LNP58_RS16195;product=preprotein translocase subunit SecG;protein_id=WP_011259752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3404567 3404651 . + . ID=gene-LNP58_RS16200;Name=LNP58_RS16200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16200;old_locus_tag=LNP58_16170 NZ_CP086372.1 tRNAscan-SE tRNA 3404567 3404651 . + . ID=rna-LNP58_RS16200;Parent=gene-LNP58_RS16200;anticodon=(pos:3404601..3404603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16200;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 3404567 3404651 . + . ID=exon-LNP58_RS16200-1;Parent=rna-LNP58_RS16200;anticodon=(pos:3404601..3404603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16200;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 3404754 3405110 . + . ID=gene-LNP58_RS16205;Name=LNP58_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16205;old_locus_tag=LNP58_16175 NZ_CP086372.1 Protein Homology CDS 3404754 3405110 . + 0 ID=cds-WP_011409060.1;Parent=gene-LNP58_RS16205;Dbxref=Genbank:WP_011409060.1;Name=WP_011409060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=LNP58_RS16205;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_011409060.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3405101 3405655 . + . ID=gene-LNP58_RS16210;Name=LNP58_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16210;old_locus_tag=LNP58_16180 NZ_CP086372.1 Protein Homology CDS 3405101 3405655 . + 0 ID=cds-WP_010371165.1;Parent=gene-LNP58_RS16210;Dbxref=Genbank:WP_010371165.1;Name=WP_010371165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=LNP58_RS16210;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_010371165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3405692 3406444 . + . ID=gene-LNP58_RS16215;Name=LNP58_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16215;old_locus_tag=LNP58_16185 NZ_CP086372.1 Protein Homology CDS 3405692 3406444 . + 0 ID=cds-WP_011259749.1;Parent=gene-LNP58_RS16215;Dbxref=Genbank:WP_011259749.1;Name=WP_011259749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927494.1;locus_tag=LNP58_RS16215;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_011259749.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3406441 3407748 . + . ID=gene-LNP58_RS16220;Name=LNP58_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16220;old_locus_tag=LNP58_16190 NZ_CP086372.1 Protein Homology CDS 3406441 3407748 . + 0 ID=cds-WP_011259748.1;Parent=gene-LNP58_RS16220;Dbxref=Genbank:WP_011259748.1;Name=WP_011259748.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=LNP58_RS16220;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_011259748.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3407745 3408272 . + . ID=gene-LNP58_RS16225;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LNP58_RS16225;old_locus_tag=LNP58_16195 NZ_CP086372.1 Protein Homology CDS 3407745 3408272 . + 0 ID=cds-WP_011259747.1;Parent=gene-LNP58_RS16225;Dbxref=Genbank:WP_011259747.1;Name=WP_011259747.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=LNP58_RS16225;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_011259747.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3408276 3409610 . + . ID=gene-LNP58_RS16230;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LNP58_RS16230;old_locus_tag=LNP58_16200 NZ_CP086372.1 Protein Homology CDS 3408276 3409610 . + 0 ID=cds-WP_011259746.1;Parent=gene-LNP58_RS16230;Dbxref=Genbank:WP_011259746.1;Name=WP_011259746.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503795.1;locus_tag=LNP58_RS16230;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_011259746.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3409607 3411841 . + . ID=gene-LNP58_RS16235;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LNP58_RS16235;old_locus_tag=LNP58_16205 NZ_CP086372.1 Protein Homology CDS 3409607 3411841 . + 0 ID=cds-WP_069959938.1;Parent=gene-LNP58_RS16235;Dbxref=Genbank:WP_069959938.1;Name=WP_069959938.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347938.1;locus_tag=LNP58_RS16235;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_069959938.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3411838 3412929 . + . ID=gene-LNP58_RS16240;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LNP58_RS16240;old_locus_tag=LNP58_16210 NZ_CP086372.1 Protein Homology CDS 3411838 3412929 . + 0 ID=cds-WP_011259744.1;Parent=gene-LNP58_RS16240;Dbxref=Genbank:WP_011259744.1;Name=WP_011259744.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375869.1;locus_tag=LNP58_RS16240;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_011259744.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3412933 3413421 . + . ID=gene-LNP58_RS16245;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LNP58_RS16245;old_locus_tag=LNP58_16215 NZ_CP086372.1 Protein Homology CDS 3412933 3413421 . + 0 ID=cds-WP_011409057.1;Parent=gene-LNP58_RS16245;Dbxref=Genbank:WP_011409057.1;Name=WP_011409057.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=LNP58_RS16245;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011409057.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3413426 3414088 . + . ID=gene-LNP58_RS16250;Name=LNP58_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16250;old_locus_tag=LNP58_16220 NZ_CP086372.1 Protein Homology CDS 3413426 3414088 . + 0 ID=cds-WP_024743634.1;Parent=gene-LNP58_RS16250;Dbxref=Genbank:WP_024743634.1;Name=WP_024743634.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237526.1;locus_tag=LNP58_RS16250;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_024743634.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3414085 3414390 . + . ID=gene-LNP58_RS16255;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LNP58_RS16255;old_locus_tag=LNP58_16225 NZ_CP086372.1 Protein Homology CDS 3414085 3414390 . + 0 ID=cds-WP_005914274.1;Parent=gene-LNP58_RS16255;Dbxref=Genbank:WP_005914274.1;Name=WP_005914274.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450557.1;locus_tag=LNP58_RS16255;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_005914274.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3414398 3416557 . + . ID=gene-LNP58_RS16260;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LNP58_RS16260;old_locus_tag=LNP58_16230 NZ_CP086372.1 Protein Homology CDS 3414398 3416557 . + 0 ID=cds-WP_044756632.1;Parent=gene-LNP58_RS16260;Dbxref=Genbank:WP_044756632.1;Name=WP_044756632.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485563.1;locus_tag=LNP58_RS16260;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_044756632.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3416578 3418080 . + . ID=gene-LNP58_RS16265;Name=LNP58_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16265;old_locus_tag=LNP58_16235 NZ_CP086372.1 Protein Homology CDS 3416578 3418080 . + 0 ID=cds-WP_053502447.1;Parent=gene-LNP58_RS16265;Dbxref=Genbank:WP_053502447.1;Name=WP_053502447.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300411.1;locus_tag=LNP58_RS16265;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_053502447.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3418117 3419577 . + . ID=gene-LNP58_RS16270;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LNP58_RS16270;old_locus_tag=LNP58_16240 NZ_CP086372.1 Protein Homology CDS 3418117 3419577 . + 0 ID=cds-WP_069960097.1;Parent=gene-LNP58_RS16270;Dbxref=Genbank:WP_069960097.1;Name=WP_069960097.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485567.1;locus_tag=LNP58_RS16270;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_069960097.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3419778 3419854 . + . ID=gene-LNP58_RS16275;Name=LNP58_RS16275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16275;old_locus_tag=LNP58_16245 NZ_CP086372.1 tRNAscan-SE tRNA 3419778 3419854 . + . ID=rna-LNP58_RS16275;Parent=gene-LNP58_RS16275;anticodon=(pos:3419812..3419814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16275;product=tRNA-Met NZ_CP086372.1 tRNAscan-SE exon 3419778 3419854 . + . ID=exon-LNP58_RS16275-1;Parent=rna-LNP58_RS16275;anticodon=(pos:3419812..3419814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16275;product=tRNA-Met NZ_CP086372.1 RefSeq gene 3420052 3420642 . + . ID=gene-LNP58_RS16280;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LNP58_RS16280;old_locus_tag=LNP58_16250 NZ_CP086372.1 Protein Homology CDS 3420052 3420642 . + 0 ID=cds-WP_011259738.1;Parent=gene-LNP58_RS16280;Dbxref=Genbank:WP_011259738.1;Name=WP_011259738.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300413.1;locus_tag=LNP58_RS16280;product=ribosome maturation factor RimP;protein_id=WP_011259738.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3420647 3422158 . + . ID=gene-LNP58_RS16285;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LNP58_RS16285;old_locus_tag=LNP58_16255 NZ_CP086372.1 Protein Homology CDS 3420647 3422158 . + 0 ID=cds-WP_011259737.1;Parent=gene-LNP58_RS16285;Dbxref=Genbank:WP_011259737.1;Name=WP_011259737.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=LNP58_RS16285;product=transcription termination factor NusA;protein_id=WP_011259737.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3422254 3424974 . + . ID=gene-LNP58_RS16290;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LNP58_RS16290;old_locus_tag=LNP58_16260 NZ_CP086372.1 Protein Homology CDS 3422254 3424974 . + 0 ID=cds-WP_011409053.1;Parent=gene-LNP58_RS16290;Dbxref=Genbank:WP_011409053.1;Name=WP_011409053.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159225.1;locus_tag=LNP58_RS16290;product=translation initiation factor IF-2;protein_id=WP_011409053.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3425118 3425510 . + . ID=gene-LNP58_RS16295;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LNP58_RS16295;old_locus_tag=LNP58_16265 NZ_CP086372.1 Protein Homology CDS 3425118 3425510 . + 0 ID=cds-WP_011259735.1;Parent=gene-LNP58_RS16295;Dbxref=Genbank:WP_011259735.1;Name=WP_011259735.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051765.1;locus_tag=LNP58_RS16295;product=30S ribosome-binding factor RbfA;protein_id=WP_011259735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3425590 3426516 . + . ID=gene-LNP58_RS16300;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LNP58_RS16300;old_locus_tag=LNP58_16270 NZ_CP086372.1 Protein Homology CDS 3425590 3426516 . + 0 ID=cds-WP_011259734.1;Parent=gene-LNP58_RS16300;Dbxref=Genbank:WP_011259734.1;Name=WP_011259734.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848688.1;locus_tag=LNP58_RS16300;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_011259734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3426673 3426933 . + . ID=gene-LNP58_RS16305;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LNP58_RS16305;old_locus_tag=LNP58_16275 NZ_CP086372.1 Protein Homology CDS 3426673 3426933 . + 0 ID=cds-WP_003485583.1;Parent=gene-LNP58_RS16305;Dbxref=Genbank:WP_003485583.1;Name=WP_003485583.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=LNP58_RS16305;product=30S ribosomal protein S15;protein_id=WP_003485583.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3427099 3429213 . + . ID=gene-LNP58_RS16310;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LNP58_RS16310;old_locus_tag=LNP58_16280 NZ_CP086372.1 Protein Homology CDS 3427099 3429213 . + 0 ID=cds-WP_011259733.1;Parent=gene-LNP58_RS16310;Dbxref=Genbank:WP_011259733.1;Name=WP_011259733.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259733.1;locus_tag=LNP58_RS16310;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_011259733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3429587 3430627 . - . ID=gene-LNP58_RS16315;Name=LNP58_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16315;old_locus_tag=LNP58_16285 NZ_CP086372.1 Protein Homology CDS 3429587 3430627 . - 0 ID=cds-WP_011409052.1;Parent=gene-LNP58_RS16315;Dbxref=Genbank:WP_011409052.1;Name=WP_011409052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156103.1;locus_tag=LNP58_RS16315;product=DUF2272 domain-containing protein;protein_id=WP_011409052.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3430691 3431578 . - . ID=gene-LNP58_RS16320;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LNP58_RS16320;old_locus_tag=LNP58_16290 NZ_CP086372.1 Protein Homology CDS 3430691 3431578 . - 0 ID=cds-WP_011259731.1;Parent=gene-LNP58_RS16320;Dbxref=Genbank:WP_011259731.1;Name=WP_011259731.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158758.1;locus_tag=LNP58_RS16320;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_011259731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3431575 3431844 . - . ID=gene-LNP58_RS16325;Name=LNP58_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16325;old_locus_tag=LNP58_16295 NZ_CP086372.1 Protein Homology CDS 3431575 3431844 . - 0 ID=cds-WP_011259730.1;Parent=gene-LNP58_RS16325;Dbxref=Genbank:WP_011259730.1;Name=WP_011259730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570984.1;locus_tag=LNP58_RS16325;product=hypothetical protein;protein_id=WP_011259730.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3431903 3432406 . + . ID=gene-LNP58_RS16330;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LNP58_RS16330;old_locus_tag=LNP58_16300 NZ_CP086372.1 Protein Homology CDS 3431903 3432406 . + 0 ID=cds-WP_011259729.1;Parent=gene-LNP58_RS16330;Dbxref=Genbank:WP_011259729.1;Name=WP_011259729.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468225.1;locus_tag=LNP58_RS16330;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011259729.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3432403 3433548 . + . ID=gene-LNP58_RS16335;Name=LNP58_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16335;old_locus_tag=LNP58_16305 NZ_CP086372.1 Protein Homology CDS 3432403 3433548 . + 0 ID=cds-WP_011259728.1;Parent=gene-LNP58_RS16335;Dbxref=Genbank:WP_011259728.1;Name=WP_011259728.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051762.1;locus_tag=LNP58_RS16335;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_011259728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3433690 3434268 . - . ID=gene-LNP58_RS16340;Name=LNP58_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16340;old_locus_tag=LNP58_16310 NZ_CP086372.1 Protein Homology CDS 3433690 3434268 . - 0 ID=cds-WP_011409050.1;Parent=gene-LNP58_RS16340;Dbxref=Genbank:WP_011409050.1;Name=WP_011409050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259727.1;locus_tag=LNP58_RS16340;product=superoxide dismutase;protein_id=WP_011409050.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3434390 3434710 . + . ID=gene-LNP58_RS16345;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LNP58_RS16345;old_locus_tag=LNP58_16315 NZ_CP086372.1 Protein Homology CDS 3434390 3434710 . + 0 ID=cds-WP_011259726.1;Parent=gene-LNP58_RS16345;Dbxref=Genbank:WP_011259726.1;Name=WP_011259726.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485599.1;locus_tag=LNP58_RS16345;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011259726.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3434707 3435450 . + . ID=gene-LNP58_RS16350;Name=LNP58_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16350;old_locus_tag=LNP58_16320 NZ_CP086372.1 Protein Homology CDS 3434707 3435450 . + 0 ID=cds-WP_011259725.1;Parent=gene-LNP58_RS16350;Dbxref=Genbank:WP_011259725.1;Name=WP_011259725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503773.1;locus_tag=LNP58_RS16350;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011259725.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3435447 3436046 . + . ID=gene-LNP58_RS16355;Name=LNP58_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16355;old_locus_tag=LNP58_16325 NZ_CP086372.1 Protein Homology CDS 3435447 3436046 . + 0 ID=cds-WP_011409048.1;Parent=gene-LNP58_RS16355;Dbxref=Genbank:WP_011409048.1;Name=WP_011409048.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810180.1;locus_tag=LNP58_RS16355;product=YhgN family NAAT transporter;protein_id=WP_011409048.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3436115 3436191 . + . ID=gene-LNP58_RS16360;Name=LNP58_RS16360;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS16360;old_locus_tag=LNP58_16330 NZ_CP086372.1 cmsearch ncRNA 3436115 3436191 . + . ID=rna-LNP58_RS16360;Parent=gene-LNP58_RS16360;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16360;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3436115 3436191 . + . ID=exon-LNP58_RS16360-1;Parent=rna-LNP58_RS16360;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16360;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3436804 3439998 . + . ID=gene-LNP58_RS16365;Name=LNP58_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16365;old_locus_tag=LNP58_16335 NZ_CP086372.1 Protein Homology CDS 3436804 3439998 . + 0 ID=cds-WP_011259723.1;Parent=gene-LNP58_RS16365;Dbxref=Genbank:WP_011259723.1;Name=WP_011259723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167812.1;locus_tag=LNP58_RS16365;product=TonB-dependent receptor;protein_id=WP_011259723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3440105 3441490 . + . ID=gene-LNP58_RS16370;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LNP58_RS16370;old_locus_tag=LNP58_16340 NZ_CP086372.1 Protein Homology CDS 3440105 3441490 . + 0 ID=cds-WP_011259722.1;Parent=gene-LNP58_RS16370;Dbxref=Genbank:WP_011259722.1;Name=WP_011259722.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154671.1;locus_tag=LNP58_RS16370;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_011259722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3441660 3442175 . + . ID=gene-LNP58_RS16375;Name=LNP58_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16375;old_locus_tag=LNP58_16345 NZ_CP086372.1 Protein Homology CDS 3441660 3442175 . + 0 ID=cds-WP_011259721.1;Parent=gene-LNP58_RS16375;Dbxref=Genbank:WP_011259721.1;Name=WP_011259721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259721.1;locus_tag=LNP58_RS16375;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_011259721.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3442172 3442645 . + . ID=gene-LNP58_RS16380;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LNP58_RS16380;old_locus_tag=LNP58_16350 NZ_CP086372.1 Protein Homology CDS 3442172 3442645 . + 0 ID=cds-WP_011259720.1;Parent=gene-LNP58_RS16380;Dbxref=Genbank:WP_011259720.1;Name=WP_011259720.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259720.1;locus_tag=LNP58_RS16380;product=type IV pilus modification protein PilV;protein_id=WP_011259720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3442642 3443808 . + . ID=gene-LNP58_RS16385;Name=LNP58_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16385;old_locus_tag=LNP58_16355 NZ_CP086372.1 Protein Homology CDS 3442642 3443808 . + 0 ID=cds-WP_011259719.1;Parent=gene-LNP58_RS16385;Dbxref=Genbank:WP_011259719.1;Name=WP_011259719.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259719.1;locus_tag=LNP58_RS16385;product=PilW family protein;protein_id=WP_011259719.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3443812 3444321 . + . ID=gene-LNP58_RS16390;Name=LNP58_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16390;old_locus_tag=LNP58_16360 NZ_CP086372.1 Protein Homology CDS 3443812 3444321 . + 0 ID=cds-WP_011259718.1;Parent=gene-LNP58_RS16390;Dbxref=Genbank:WP_011259718.1;Name=WP_011259718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259718.1;locus_tag=LNP58_RS16390;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=WP_011259718.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3444332 3448261 . + . ID=gene-LNP58_RS16395;Name=LNP58_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16395;old_locus_tag=LNP58_16365 NZ_CP086372.1 Protein Homology CDS 3444332 3448261 . + 0 ID=cds-WP_228329664.1;Parent=gene-LNP58_RS16395;Dbxref=Genbank:WP_228329664.1;Name=WP_228329664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371284.1;locus_tag=LNP58_RS16395;product=PilC/PilY family type IV pilus protein;protein_id=WP_228329664.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3448274 3448723 . + . ID=gene-LNP58_RS16400;Name=LNP58_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16400;old_locus_tag=LNP58_16370 NZ_CP086372.1 Protein Homology CDS 3448274 3448723 . + 0 ID=cds-WP_042465105.1;Parent=gene-LNP58_RS16400;Dbxref=Genbank:WP_042465105.1;Name=WP_042465105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116280.1;locus_tag=LNP58_RS16400;product=type IV pilin protein;protein_id=WP_042465105.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3448776 3448852 . + . ID=gene-LNP58_RS16405;Name=LNP58_RS16405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16405;old_locus_tag=LNP58_16375 NZ_CP086372.1 tRNAscan-SE tRNA 3448776 3448852 . + . ID=rna-LNP58_RS16405;Parent=gene-LNP58_RS16405;anticodon=(pos:3448810..3448812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16405;product=tRNA-Asn NZ_CP086372.1 tRNAscan-SE exon 3448776 3448852 . + . ID=exon-LNP58_RS16405-1;Parent=rna-LNP58_RS16405;anticodon=(pos:3448810..3448812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16405;product=tRNA-Asn NZ_CP086372.1 RefSeq gene 3448902 3449444 . - . ID=gene-LNP58_RS16410;Name=LNP58_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16410;old_locus_tag=LNP58_16380 NZ_CP086372.1 Protein Homology CDS 3448902 3449444 . - 0 ID=cds-WP_011259713.1;Parent=gene-LNP58_RS16410;Dbxref=Genbank:WP_011259713.1;Name=WP_011259713.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371290.1;locus_tag=LNP58_RS16410;product=GspH/FimT family pseudopilin;protein_id=WP_011259713.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3449583 3451604 . + . ID=gene-LNP58_RS16415;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LNP58_RS16415;old_locus_tag=LNP58_16385 NZ_CP086372.1 Protein Homology CDS 3449583 3451604 . + 0 ID=cds-WP_011259712.1;Parent=gene-LNP58_RS16415;Dbxref=Genbank:WP_011259712.1;Name=WP_011259712.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037621.1;locus_tag=LNP58_RS16415;product=excinuclease ABC subunit UvrB;protein_id=WP_011259712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3451700 3451774 . + . ID=gene-LNP58_RS16420;Name=LNP58_RS16420;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16420;old_locus_tag=LNP58_16390 NZ_CP086372.1 tRNAscan-SE tRNA 3451700 3451774 . + . ID=rna-LNP58_RS16420;Parent=gene-LNP58_RS16420;anticodon=(pos:3451732..3451734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16420;product=tRNA-Val NZ_CP086372.1 tRNAscan-SE exon 3451700 3451774 . + . ID=exon-LNP58_RS16420-1;Parent=rna-LNP58_RS16420;anticodon=(pos:3451732..3451734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16420;product=tRNA-Val NZ_CP086372.1 RefSeq pseudogene 3452031 3452180 . + . ID=gene-LNP58_RS16425;Name=LNP58_RS16425;end_range=3452180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16425;old_locus_tag=LNP58_16395;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3452031 3452180 . + 0 ID=cds-LNP58_RS16425;Parent=gene-LNP58_RS16425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3452180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408310.1;locus_tag=LNP58_RS16425;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3452213 3453094 . - . ID=gene-LNP58_RS16430;Name=LNP58_RS16430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16430;old_locus_tag=LNP58_16400;pseudo=true NZ_CP086372.1 Protein Homology CDS 3452213 3453094 . - 0 ID=cds-LNP58_RS16430;Parent=gene-LNP58_RS16430;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=LNP58_RS16430;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3453181 3453363 . + . ID=gene-LNP58_RS16435;Name=LNP58_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16435;old_locus_tag=LNP58_16405 NZ_CP086372.1 Protein Homology CDS 3453181 3453363 . + 0 ID=cds-WP_012445471.1;Parent=gene-LNP58_RS16435;Dbxref=Genbank:WP_012445471.1;Name=WP_012445471.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=LNP58_RS16435;product=integrase core domain-containing protein;protein_id=WP_012445471.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3453390 3453571 . - . ID=gene-LNP58_RS16440;Name=LNP58_RS16440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16440;old_locus_tag=LNP58_16410;partial=true;pseudo=true;start_range=.,3453390 NZ_CP086372.1 Protein Homology CDS 3453390 3453571 . - 0 ID=cds-LNP58_RS16440;Parent=gene-LNP58_RS16440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930238.1;locus_tag=LNP58_RS16440;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;start_range=.,3453390;transl_table=11 NZ_CP086372.1 RefSeq gene 3453896 3455800 . + . ID=gene-LNP58_RS16445;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LNP58_RS16445;old_locus_tag=LNP58_16415 NZ_CP086372.1 Protein Homology CDS 3453896 3455800 . + 0 ID=cds-WP_011409044.1;Parent=gene-LNP58_RS16445;Dbxref=Genbank:WP_011409044.1;Name=WP_011409044.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303507.1;locus_tag=LNP58_RS16445;product=threonine--tRNA ligase;protein_id=WP_011409044.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3455849 3456391 . + . ID=gene-LNP58_RS16450;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LNP58_RS16450;old_locus_tag=LNP58_16420 NZ_CP086372.1 Protein Homology CDS 3455849 3456391 . + 0 ID=cds-WP_080098376.1;Parent=gene-LNP58_RS16450;Dbxref=Genbank:WP_080098376.1;Name=WP_080098376.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=LNP58_RS16450;product=translation initiation factor IF-3;protein_id=WP_080098376.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3456640 3456837 . + . ID=gene-LNP58_RS16455;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LNP58_RS16455;old_locus_tag=LNP58_16425 NZ_CP086372.1 Protein Homology CDS 3456640 3456837 . + 0 ID=cds-WP_002811096.1;Parent=gene-LNP58_RS16455;Dbxref=Genbank:WP_002811096.1;Name=WP_002811096.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=LNP58_RS16455;product=50S ribosomal protein L35;protein_id=WP_002811096.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3456848 3457207 . + . ID=gene-LNP58_RS16460;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LNP58_RS16460;old_locus_tag=LNP58_16430 NZ_CP086372.1 Protein Homology CDS 3456848 3457207 . + 0 ID=cds-WP_003484828.1;Parent=gene-LNP58_RS16460;Dbxref=Genbank:WP_003484828.1;Name=WP_003484828.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124858.1;locus_tag=LNP58_RS16460;product=50S ribosomal protein L20;protein_id=WP_003484828.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3457462 3458457 . + . ID=gene-LNP58_RS16465;Name=LNP58_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16465;old_locus_tag=LNP58_16435 NZ_CP086372.1 Protein Homology CDS 3457462 3458457 . + 0 ID=cds-WP_011259704.1;Parent=gene-LNP58_RS16465;Dbxref=Genbank:WP_011259704.1;Name=WP_011259704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=LNP58_RS16465;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_011259704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3458566 3460944 . + . ID=gene-LNP58_RS16470;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LNP58_RS16470;old_locus_tag=LNP58_16440 NZ_CP086372.1 Protein Homology CDS 3458566 3460944 . + 0 ID=cds-WP_011259703.1;Parent=gene-LNP58_RS16470;Dbxref=Genbank:WP_011259703.1;Name=WP_011259703.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=LNP58_RS16470;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011259703.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3460966 3461265 . + . ID=gene-LNP58_RS16475;Name=LNP58_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16475;old_locus_tag=LNP58_16445 NZ_CP086372.1 Protein Homology CDS 3460966 3461265 . + 0 ID=cds-WP_002811076.1;Parent=gene-LNP58_RS16475;Dbxref=Genbank:WP_002811076.1;Name=WP_002811076.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811076.1;locus_tag=LNP58_RS16475;product=integration host factor subunit alpha;protein_id=WP_002811076.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3461246 3461602 . + . ID=gene-LNP58_RS16480;Name=LNP58_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16480;old_locus_tag=LNP58_16450 NZ_CP086372.1 Protein Homology CDS 3461246 3461602 . + 0 ID=cds-WP_005995911.1;Parent=gene-LNP58_RS16480;Dbxref=Genbank:WP_005995911.1;Name=WP_005995911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=LNP58_RS16480;product=MerR family transcriptional regulator;protein_id=WP_005995911.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3461663 3461739 . + . ID=gene-LNP58_RS16485;Name=LNP58_RS16485;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16485;old_locus_tag=LNP58_16455 NZ_CP086372.1 tRNAscan-SE tRNA 3461663 3461739 . + . ID=rna-LNP58_RS16485;Parent=gene-LNP58_RS16485;anticodon=(pos:3461697..3461699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16485;product=tRNA-Pro NZ_CP086372.1 tRNAscan-SE exon 3461663 3461739 . + . ID=exon-LNP58_RS16485-1;Parent=rna-LNP58_RS16485;anticodon=(pos:3461697..3461699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16485;product=tRNA-Pro NZ_CP086372.1 RefSeq gene 3462211 3462909 . + . ID=gene-LNP58_RS16490;Name=LNP58_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16490;old_locus_tag=LNP58_16460 NZ_CP086372.1 Protein Homology CDS 3462211 3462909 . + 0 ID=cds-WP_011259702.1;Parent=gene-LNP58_RS16490;Dbxref=Genbank:WP_011259702.1;Name=WP_011259702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112207.1;locus_tag=LNP58_RS16490;product=polysaccharide export protein;protein_id=WP_011259702.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3462891 3464330 . + . ID=gene-LNP58_RS16495;Name=LNP58_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16495;old_locus_tag=LNP58_16465 NZ_CP086372.1 Protein Homology CDS 3462891 3464330 . + 0 ID=cds-WP_027704192.1;Parent=gene-LNP58_RS16495;Dbxref=Genbank:WP_027704192.1;Name=WP_027704192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=LNP58_RS16495;product=GumC family protein;protein_id=WP_027704192.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3464574 3466028 . + . ID=gene-LNP58_RS16500;Name=LNP58_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16500;old_locus_tag=LNP58_16470 NZ_CP086372.1 Protein Homology CDS 3464574 3466028 . + 0 ID=cds-WP_011409041.1;Parent=gene-LNP58_RS16500;Dbxref=Genbank:WP_011409041.1;Name=WP_011409041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914017.1;locus_tag=LNP58_RS16500;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_011409041.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3466123 3467412 . + . ID=gene-LNP58_RS16505;Name=LNP58_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16505;old_locus_tag=LNP58_16475 NZ_CP086372.1 Protein Homology CDS 3466123 3467412 . + 0 ID=cds-WP_049756340.1;Parent=gene-LNP58_RS16505;Dbxref=Genbank:WP_049756340.1;Name=WP_049756340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117349.1;locus_tag=LNP58_RS16505;product=hypothetical protein;protein_id=WP_049756340.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3467409 3468500 . + . ID=gene-LNP58_RS16510;Name=LNP58_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16510;old_locus_tag=LNP58_16480 NZ_CP086372.1 Protein Homology CDS 3467409 3468500 . + 0 ID=cds-WP_011259698.1;Parent=gene-LNP58_RS16510;Dbxref=Genbank:WP_011259698.1;Name=WP_011259698.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574566.1;locus_tag=LNP58_RS16510;product=acyltransferase family protein;protein_id=WP_011259698.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3468517 3469593 . + . ID=gene-LNP58_RS16515;Name=LNP58_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16515;old_locus_tag=LNP58_16485 NZ_CP086372.1 Protein Homology CDS 3468517 3469593 . + 0 ID=cds-WP_011409040.1;Parent=gene-LNP58_RS16515;Dbxref=Genbank:WP_011409040.1;Name=WP_011409040.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502860.1;locus_tag=LNP58_RS16515;product=acyltransferase family protein;protein_id=WP_011409040.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3469661 3470803 . + . ID=gene-LNP58_RS16520;Name=gumH;gbkey=Gene;gene=gumH;gene_biotype=protein_coding;locus_tag=LNP58_RS16520;old_locus_tag=LNP58_16490 NZ_CP086372.1 Protein Homology CDS 3469661 3470803 . + 0 ID=cds-WP_011259696.1;Parent=gene-LNP58_RS16520;Dbxref=Genbank:WP_011259696.1;Name=WP_011259696.1;gbkey=CDS;gene=gumH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484848.1;locus_tag=LNP58_RS16520;product=GDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase;protein_id=WP_011259696.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3470800 3471849 . + . ID=gene-LNP58_RS16525;Name=LNP58_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16525;old_locus_tag=LNP58_16495 NZ_CP086372.1 Protein Homology CDS 3470800 3471849 . + 0 ID=cds-WP_011409039.1;Parent=gene-LNP58_RS16525;Dbxref=Genbank:WP_011409039.1;Name=WP_011409039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157110.1;locus_tag=LNP58_RS16525;product=glycosyltransferase;protein_id=WP_011409039.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3471867 3473360 . + . ID=gene-LNP58_RS16530;Name=LNP58_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16530;old_locus_tag=LNP58_16500 NZ_CP086372.1 Protein Homology CDS 3471867 3473360 . + 0 ID=cds-WP_011409038.1;Parent=gene-LNP58_RS16530;Dbxref=Genbank:WP_011409038.1;Name=WP_011409038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157109.1;locus_tag=LNP58_RS16530;product=lipopolysaccharide biosynthesis protein;protein_id=WP_011409038.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3473425 3474621 . + . ID=gene-LNP58_RS16535;Name=LNP58_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16535;old_locus_tag=LNP58_16505 NZ_CP086372.1 Protein Homology CDS 3473425 3474621 . + 0 ID=cds-WP_011409037.1;Parent=gene-LNP58_RS16535;Dbxref=Genbank:WP_011409037.1;Name=WP_011409037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363526.1;locus_tag=LNP58_RS16535;product=glycosyltransferase;protein_id=WP_011409037.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3474658 3475452 . + . ID=gene-LNP58_RS16540;Name=LNP58_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16540;old_locus_tag=LNP58_16510 NZ_CP086372.1 Protein Homology CDS 3474658 3475452 . + 0 ID=cds-WP_011259692.1;Parent=gene-LNP58_RS16540;Dbxref=Genbank:WP_011259692.1;Name=WP_011259692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484852.1;locus_tag=LNP58_RS16540;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_011259692.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3475457 3476251 . + . ID=gene-LNP58_RS16545;Name=LNP58_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16545;old_locus_tag=LNP58_16515 NZ_CP086372.1 Protein Homology CDS 3475457 3476251 . + 0 ID=cds-WP_042465094.1;Parent=gene-LNP58_RS16545;Dbxref=Genbank:WP_042465094.1;Name=WP_042465094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157106.1;locus_tag=LNP58_RS16545;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_042465094.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3476290 3476751 . + . ID=gene-LNP58_RS16550;Name=LNP58_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16550;old_locus_tag=LNP58_16520 NZ_CP086372.1 Protein Homology CDS 3476290 3476751 . + 0 ID=cds-WP_011409035.1;Parent=gene-LNP58_RS16550;Dbxref=Genbank:WP_011409035.1;Name=WP_011409035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502866.1;locus_tag=LNP58_RS16550;product=cupin domain-containing protein;protein_id=WP_011409035.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3476840 3477840 . + . ID=gene-LNP58_RS16555;Name=LNP58_RS16555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16555;old_locus_tag=LNP58_16525;pseudo=true NZ_CP086372.1 Protein Homology CDS 3476840 3477840 . + 0 ID=cds-LNP58_RS16555;Parent=gene-LNP58_RS16555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173582.1;locus_tag=LNP58_RS16555;product=TraB/GumN family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3477958 3479040 . - . ID=gene-LNP58_RS16560;Name=LNP58_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16560;old_locus_tag=LNP58_16530 NZ_CP086372.1 Protein Homology CDS 3477958 3479040 . - 0 ID=cds-WP_011409034.1;Parent=gene-LNP58_RS16560;Dbxref=Genbank:WP_011409034.1;Name=WP_011409034.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=LNP58_RS16560;product=IS630 family transposase;protein_id=WP_011409034.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3479562 3479958 . - . ID=gene-LNP58_RS16565;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LNP58_RS16565;old_locus_tag=LNP58_16535 NZ_CP086372.1 cmsearch tmRNA 3479562 3479958 . - . ID=rna-LNP58_RS16565;Parent=gene-LNP58_RS16565;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16565;product=transfer-messenger RNA NZ_CP086372.1 cmsearch exon 3479562 3479958 . - . ID=exon-LNP58_RS16565-1;Parent=rna-LNP58_RS16565;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16565;product=transfer-messenger RNA NZ_CP086372.1 RefSeq pseudogene 3480094 3481740 . + . ID=gene-LNP58_RS16570;Name=LNP58_RS16570;end_range=3481740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16570;old_locus_tag=LNP58_16540;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3480094 3481740 . + 0 ID=cds-LNP58_RS16570;Parent=gene-LNP58_RS16570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3481740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163234.1;locus_tag=LNP58_RS16570;partial=true;product=serine peptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3481831 3482367 . - . ID=gene-LNP58_RS16575;Name=LNP58_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16575;old_locus_tag=LNP58_16545 NZ_CP086372.1 Protein Homology CDS 3481831 3482367 . - 0 ID=cds-WP_011409032.1;Parent=gene-LNP58_RS16575;Dbxref=Genbank:WP_011409032.1;Name=WP_011409032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157093.1;locus_tag=LNP58_RS16575;product=lipocalin family protein;protein_id=WP_011409032.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3482557 3482632 . + . ID=gene-LNP58_RS16580;Name=LNP58_RS16580;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16580;old_locus_tag=LNP58_16550 NZ_CP086372.1 tRNAscan-SE tRNA 3482557 3482632 . + . ID=rna-LNP58_RS16580;Parent=gene-LNP58_RS16580;anticodon=(pos:3482590..3482592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16580;product=tRNA-Phe NZ_CP086372.1 tRNAscan-SE exon 3482557 3482632 . + . ID=exon-LNP58_RS16580-1;Parent=rna-LNP58_RS16580;anticodon=(pos:3482590..3482592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16580;product=tRNA-Phe NZ_CP086372.1 RefSeq gene 3482637 3483104 . - . ID=gene-LNP58_RS16585;Name=LNP58_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16585;old_locus_tag=LNP58_16555 NZ_CP086372.1 Protein Homology CDS 3482637 3483104 . - 0 ID=cds-WP_181718264.1;Parent=gene-LNP58_RS16585;Dbxref=Genbank:WP_181718264.1;Name=WP_181718264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013958182.1;locus_tag=LNP58_RS16585;product=hypothetical protein;protein_id=WP_181718264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3483085 3483375 . - . ID=gene-LNP58_RS16590;Name=LNP58_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16590;old_locus_tag=LNP58_16560 NZ_CP086372.1 GeneMarkS-2+ CDS 3483085 3483375 . - 0 ID=cds-WP_011409031.1;Parent=gene-LNP58_RS16590;Dbxref=Genbank:WP_011409031.1;Name=WP_011409031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS16590;product=hypothetical protein;protein_id=WP_011409031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3483874 3484905 . + . ID=gene-LNP58_RS16600;Name=LNP58_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16600;old_locus_tag=LNP58_16570 NZ_CP086372.1 Protein Homology CDS 3483874 3484905 . + 0 ID=cds-WP_042465093.1;Parent=gene-LNP58_RS16600;Dbxref=Genbank:WP_042465093.1;Name=WP_042465093.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=LNP58_RS16600;product=IS630 family transposase;protein_id=WP_042465093.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3484887 3485462 . - . ID=gene-LNP58_RS16605;Name=LNP58_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16605;old_locus_tag=LNP58_16575 NZ_CP086372.1 Protein Homology CDS 3484887 3485462 . - 0 ID=cds-WP_011409029.1;Parent=gene-LNP58_RS16605;Dbxref=Genbank:WP_011409029.1;Name=WP_011409029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033447.1;locus_tag=LNP58_RS16605;product=BrxE family protein;protein_id=WP_011409029.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3485494 3485784 . - . ID=gene-LNP58_RS16610;Name=LNP58_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16610;old_locus_tag=LNP58_16580 NZ_CP086372.1 Protein Homology CDS 3485494 3485784 . - 0 ID=cds-WP_228329665.1;Parent=gene-LNP58_RS16610;Dbxref=Genbank:WP_228329665.1;Name=WP_228329665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409028.1;locus_tag=LNP58_RS16610;product=hypothetical protein;protein_id=WP_228329665.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3486149 3486748 . + . ID=gene-LNP58_RS16615;Name=LNP58_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16615;old_locus_tag=LNP58_16585 NZ_CP086372.1 Protein Homology CDS 3486149 3486748 . + 0 ID=cds-WP_011409027.1;Parent=gene-LNP58_RS16615;Dbxref=Genbank:WP_011409027.1;Name=WP_011409027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409027.1;locus_tag=LNP58_RS16615;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_011409027.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3486745 3487668 . + . ID=gene-LNP58_RS16620;Name=LNP58_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16620;old_locus_tag=LNP58_16590 NZ_CP086372.1 Protein Homology CDS 3486745 3487668 . + 0 ID=cds-WP_011259680.1;Parent=gene-LNP58_RS16620;Dbxref=Genbank:WP_011259680.1;Name=WP_011259680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259680.1;locus_tag=LNP58_RS16620;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_011259680.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3487748 3488218 . - . ID=gene-LNP58_RS16625;Name=LNP58_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16625;old_locus_tag=LNP58_16595 NZ_CP086372.1 GeneMarkS-2+ CDS 3487748 3488218 . - 0 ID=cds-WP_228329666.1;Parent=gene-LNP58_RS16625;Dbxref=Genbank:WP_228329666.1;Name=WP_228329666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS16625;product=helix-turn-helix domain-containing protein;protein_id=WP_228329666.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3488684 3488926 . + . ID=gene-LNP58_RS16630;Name=LNP58_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16630;old_locus_tag=LNP58_16600 NZ_CP086372.1 Protein Homology CDS 3488684 3488926 . + 0 ID=cds-WP_011409025.1;Parent=gene-LNP58_RS16630;Dbxref=Genbank:WP_011409025.1;Name=WP_011409025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409025.1;locus_tag=LNP58_RS16630;product=hypothetical protein;protein_id=WP_011409025.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3489378 3490343 . - . ID=gene-LNP58_RS16635;Name=LNP58_RS16635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16635;old_locus_tag=LNP58_16605;pseudo=true NZ_CP086372.1 Protein Homology CDS 3489378 3490343 . - 0 ID=cds-LNP58_RS16635;Parent=gene-LNP58_RS16635;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS16635;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3490438 3490926 . + . ID=gene-LNP58_RS16640;Name=LNP58_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16640;old_locus_tag=LNP58_16610 NZ_CP086372.1 Protein Homology CDS 3490438 3490926 . + 0 ID=cds-WP_011409022.1;Parent=gene-LNP58_RS16640;Dbxref=Genbank:WP_011409022.1;Name=WP_011409022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299957.1;locus_tag=LNP58_RS16640;product=hypothetical protein;protein_id=WP_011409022.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3490943 3491475 . - . ID=gene-LNP58_RS16645;Name=LNP58_RS16645;end_range=3491475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16645;old_locus_tag=LNP58_16615;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3490943 3491475 . - 0 ID=cds-LNP58_RS16645;Parent=gene-LNP58_RS16645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3491475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448487.1;locus_tag=LNP58_RS16645;partial=true;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3491495 3492877 . - . ID=gene-LNP58_RS16650;Name=LNP58_RS16650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16650;old_locus_tag=LNP58_16620;pseudo=true NZ_CP086372.1 Protein Homology CDS 3491495 3492877 . - 0 ID=cds-LNP58_RS16650;Parent=gene-LNP58_RS16650;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS16650;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3492989 3493141 . - . ID=gene-LNP58_RS16655;Name=LNP58_RS16655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16655;old_locus_tag=LNP58_16625;partial=true;pseudo=true;start_range=.,3492989 NZ_CP086372.1 Protein Homology CDS 3492989 3493141 . - 0 ID=cds-LNP58_RS16655;Parent=gene-LNP58_RS16655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363483.1;locus_tag=LNP58_RS16655;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,3492989;transl_table=11 NZ_CP086372.1 RefSeq gene 3493839 3495461 . + . ID=gene-LNP58_RS16660;Name=LNP58_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16660;old_locus_tag=LNP58_16630 NZ_CP086372.1 Protein Homology CDS 3493839 3495461 . + 0 ID=cds-WP_011409018.1;Parent=gene-LNP58_RS16660;Dbxref=Genbank:WP_011409018.1;Name=WP_011409018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347876.1;locus_tag=LNP58_RS16660;product=histidine kinase famiy protein;protein_id=WP_011409018.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3495826 3496104 . - . ID=gene-LNP58_RS16665;Name=LNP58_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16665;old_locus_tag=LNP58_16635 NZ_CP086372.1 Protein Homology CDS 3495826 3496104 . - 0 ID=cds-WP_027703322.1;Parent=gene-LNP58_RS16665;Dbxref=Genbank:WP_027703322.1;Name=WP_027703322.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157086.1;locus_tag=LNP58_RS16665;product=oxidative damage protection protein;protein_id=WP_027703322.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3496128 3497201 . - . ID=gene-LNP58_RS16670;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LNP58_RS16670;old_locus_tag=LNP58_16640 NZ_CP086372.1 Protein Homology CDS 3496128 3497201 . - 0 ID=cds-WP_011259671.1;Parent=gene-LNP58_RS16670;Dbxref=Genbank:WP_011259671.1;Name=WP_011259671.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157085.1;locus_tag=LNP58_RS16670;product=A/G-specific adenine glycosylase;protein_id=WP_011259671.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3497225 3497301 . - . ID=gene-LNP58_RS16675;Name=LNP58_RS16675;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS16675;old_locus_tag=LNP58_16645 NZ_CP086372.1 cmsearch ncRNA 3497225 3497301 . - . ID=rna-LNP58_RS16675;Parent=gene-LNP58_RS16675;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16675;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3497225 3497301 . - . ID=exon-LNP58_RS16675-1;Parent=rna-LNP58_RS16675;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS16675;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3497680 3499296 . - . ID=gene-LNP58_RS16680;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LNP58_RS16680;old_locus_tag=LNP58_16650 NZ_CP086372.1 Protein Homology CDS 3497680 3499296 . - 0 ID=cds-WP_042465086.1;Parent=gene-LNP58_RS16680;Dbxref=Genbank:WP_042465086.1;Name=WP_042465086.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157084.1;locus_tag=LNP58_RS16680;product=signal recognition particle-docking protein FtsY;protein_id=WP_042465086.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3499501 3500217 . - . ID=gene-LNP58_RS16685;Name=LNP58_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16685;old_locus_tag=LNP58_16655 NZ_CP086372.1 Protein Homology CDS 3499501 3500217 . - 0 ID=cds-WP_011409015.1;Parent=gene-LNP58_RS16685;Dbxref=Genbank:WP_011409015.1;Name=WP_011409015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965956.1;locus_tag=LNP58_RS16685;product=AraC family transcriptional regulator;protein_id=WP_011409015.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3500375 3501313 . + . ID=gene-LNP58_RS16690;Name=LNP58_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16690;old_locus_tag=LNP58_16660 NZ_CP086372.1 Protein Homology CDS 3500375 3501313 . + 0 ID=cds-WP_011409014.1;Parent=gene-LNP58_RS16690;Dbxref=Genbank:WP_011409014.1;Name=WP_011409014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810965.1;locus_tag=LNP58_RS16690;product=proline racemase family protein;protein_id=WP_011409014.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3501313 3502575 . + . ID=gene-LNP58_RS16695;Name=LNP58_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16695;old_locus_tag=LNP58_16665 NZ_CP086372.1 Protein Homology CDS 3501313 3502575 . + 0 ID=cds-WP_011259667.1;Parent=gene-LNP58_RS16695;Dbxref=Genbank:WP_011259667.1;Name=WP_011259667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363454.1;locus_tag=LNP58_RS16695;product=FAD-dependent oxidoreductase;protein_id=WP_011259667.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3502572 3502817 . + . ID=gene-LNP58_RS16700;Name=LNP58_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16700;old_locus_tag=LNP58_16670 NZ_CP086372.1 Protein Homology CDS 3502572 3502817 . + 0 ID=cds-WP_011259666.1;Parent=gene-LNP58_RS16700;Dbxref=Genbank:WP_011259666.1;Name=WP_011259666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301582.1;locus_tag=LNP58_RS16700;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011259666.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3502810 3504123 . + . ID=gene-LNP58_RS16705;Name=LNP58_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16705;old_locus_tag=LNP58_16675 NZ_CP086372.1 Protein Homology CDS 3502810 3504123 . + 0 ID=cds-WP_229001903.1;Parent=gene-LNP58_RS16705;Dbxref=Genbank:WP_229001903.1;Name=WP_229001903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172038.1;locus_tag=LNP58_RS16705;product=FAD/NAD(P)-binding oxidoreductase;protein_id=WP_229001903.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3504120 3505028 . + . ID=gene-LNP58_RS16710;Name=LNP58_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16710;old_locus_tag=LNP58_16680 NZ_CP086372.1 Protein Homology CDS 3504120 3505028 . + 0 ID=cds-WP_011259664.1;Parent=gene-LNP58_RS16710;Dbxref=Genbank:WP_011259664.1;Name=WP_011259664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451841.1;locus_tag=LNP58_RS16710;product=dihydrodipicolinate synthase family protein;protein_id=WP_011259664.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3505239 3506855 . + . ID=gene-LNP58_RS16715;Name=LNP58_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16715;old_locus_tag=LNP58_16685 NZ_CP086372.1 Protein Homology CDS 3505239 3506855 . + 0 ID=cds-WP_011259663.1;Parent=gene-LNP58_RS16715;Dbxref=Genbank:WP_011259663.1;Name=WP_011259663.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173723.1;locus_tag=LNP58_RS16715;product=aldehyde dehydrogenase family protein;protein_id=WP_011259663.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3506852 3508051 . + . ID=gene-LNP58_RS16720;Name=LNP58_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16720;old_locus_tag=LNP58_16690 NZ_CP086372.1 Protein Homology CDS 3506852 3508051 . + 0 ID=cds-WP_011409012.1;Parent=gene-LNP58_RS16720;Dbxref=Genbank:WP_011409012.1;Name=WP_011409012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157076.1;locus_tag=LNP58_RS16720;product=Xaa-Pro peptidase family protein;protein_id=WP_011409012.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3508169 3510001 . + . ID=gene-LNP58_RS16725;Name=LNP58_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16725;old_locus_tag=LNP58_16695 NZ_CP086372.1 Protein Homology CDS 3508169 3510001 . + 0 ID=cds-WP_069964571.1;Parent=gene-LNP58_RS16725;Dbxref=Genbank:WP_069964571.1;Name=WP_069964571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159284.1;locus_tag=LNP58_RS16725;product=DUF885 family protein;protein_id=WP_069964571.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3509998 3511863 . + . ID=gene-LNP58_RS16730;Name=LNP58_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16730;old_locus_tag=LNP58_16700 NZ_CP086372.1 Protein Homology CDS 3509998 3511863 . + 0 ID=cds-WP_069964570.1;Parent=gene-LNP58_RS16730;Dbxref=Genbank:WP_069964570.1;Name=WP_069964570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914076.1;locus_tag=LNP58_RS16730;product=DUF885 family protein;protein_id=WP_069964570.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3511926 3513512 . + . ID=gene-LNP58_RS16735;Name=LNP58_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16735;old_locus_tag=LNP58_16705 NZ_CP086372.1 Protein Homology CDS 3511926 3513512 . + 0 ID=cds-WP_011409009.1;Parent=gene-LNP58_RS16735;Dbxref=Genbank:WP_011409009.1;Name=WP_011409009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484927.1;locus_tag=LNP58_RS16735;product=APC family permease;protein_id=WP_011409009.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3513502 3515841 . + . ID=gene-LNP58_RS16740;Name=LNP58_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16740;old_locus_tag=LNP58_16710 NZ_CP086372.1 Protein Homology CDS 3513502 3515841 . + 0 ID=cds-WP_069959933.1;Parent=gene-LNP58_RS16740;Dbxref=Genbank:WP_069959933.1;Name=WP_069959933.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154742.1;locus_tag=LNP58_RS16740;product=S9 family peptidase;protein_id=WP_069959933.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3515841 3517558 . + . ID=gene-LNP58_RS16745;Name=LNP58_RS16745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16745;old_locus_tag=LNP58_16715;pseudo=true NZ_CP086372.1 Protein Homology CDS 3515841 3517558 . + 0 ID=cds-LNP58_RS16745;Parent=gene-LNP58_RS16745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472147.1;locus_tag=LNP58_RS16745;product=DUF5597 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3517555 3517851 . + . ID=gene-LNP58_RS16750;Name=LNP58_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16750;old_locus_tag=LNP58_16720 NZ_CP086372.1 Protein Homology CDS 3517555 3517851 . + 0 ID=cds-WP_069959930.1;Parent=gene-LNP58_RS16750;Dbxref=Genbank:WP_069959930.1;Name=WP_069959930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378174.1;locus_tag=LNP58_RS16750;product=hypothetical protein;protein_id=WP_069959930.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3518059 3519630 . - . ID=gene-LNP58_RS16755;Name=LNP58_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16755;old_locus_tag=LNP58_16725 NZ_CP086372.1 Protein Homology CDS 3518059 3519630 . - 0 ID=cds-WP_011259652.1;Parent=gene-LNP58_RS16755;Dbxref=Genbank:WP_011259652.1;Name=WP_011259652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303782.1;locus_tag=LNP58_RS16755;product=S53 family peptidase;protein_id=WP_011259652.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3520094 3522451 . + . ID=gene-LNP58_RS16760;Name=LNP58_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16760;old_locus_tag=LNP58_16730 NZ_CP086372.1 Protein Homology CDS 3520094 3522451 . + 0 ID=cds-WP_075242196.1;Parent=gene-LNP58_RS16760;Dbxref=Genbank:WP_075242196.1;Name=WP_075242196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167589.1;locus_tag=LNP58_RS16760;product=Tat pathway signal protein;protein_id=WP_075242196.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3522973 3525789 . + . ID=gene-LNP58_RS16765;Name=LNP58_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16765;old_locus_tag=LNP58_16735 NZ_CP086372.1 Protein Homology CDS 3522973 3525789 . + 0 ID=cds-WP_041182199.1;Parent=gene-LNP58_RS16765;Dbxref=Genbank:WP_041182199.1;Name=WP_041182199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051657.1;locus_tag=LNP58_RS16765;product=TonB-dependent receptor;protein_id=WP_041182199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3526028 3530392 . + . ID=gene-LNP58_RS16770;Name=LNP58_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16770;old_locus_tag=LNP58_16740 NZ_CP086372.1 Protein Homology CDS 3526028 3530392 . + 0 ID=cds-WP_044756677.1;Parent=gene-LNP58_RS16770;Dbxref=Genbank:WP_044756677.1;Name=WP_044756677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154735.1;locus_tag=LNP58_RS16770;product=Ig-like domain-containing protein;protein_id=WP_044756677.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3530389 3531975 . + . ID=gene-LNP58_RS16775;Name=LNP58_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16775;old_locus_tag=LNP58_16745 NZ_CP086372.1 Protein Homology CDS 3530389 3531975 . + 0 ID=cds-WP_033013184.1;Parent=gene-LNP58_RS16775;Dbxref=Genbank:WP_033013184.1;Name=WP_033013184.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920354.1;locus_tag=LNP58_RS16775;product=family 43 glycosylhydrolase;protein_id=WP_033013184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3532297 3534642 . + . ID=gene-LNP58_RS16780;Name=LNP58_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16780;old_locus_tag=LNP58_16750 NZ_CP086372.1 Protein Homology CDS 3532297 3534642 . + 0 ID=cds-WP_011409000.1;Parent=gene-LNP58_RS16780;Dbxref=Genbank:WP_011409000.1;Name=WP_011409000.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259647.1;locus_tag=LNP58_RS16780;product=S9 family peptidase;protein_id=WP_011409000.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3535139 3536115 . + . ID=gene-LNP58_RS16785;Name=LNP58_RS16785;end_range=3536115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16785;old_locus_tag=LNP58_16755;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3535139 3536115 . + 0 ID=cds-LNP58_RS16785;Parent=gene-LNP58_RS16785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3536115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=LNP58_RS16785;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3536076 3537260 . - . ID=gene-LNP58_RS16790;Name=LNP58_RS16790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16790;old_locus_tag=LNP58_16760;pseudo=true NZ_CP086372.1 Protein Homology CDS 3536076 3537260 . - 0 ID=cds-LNP58_RS16790;Parent=gene-LNP58_RS16790;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS16790;product=IS256-like element IS1113 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3537345 3539323 . + . ID=gene-LNP58_RS16795;Name=LNP58_RS16795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16795;old_locus_tag=LNP58_16765;partial=true;pseudo=true;start_range=.,3537345 NZ_CP086372.1 Protein Homology CDS 3537345 3539323 . + 0 ID=cds-LNP58_RS16795;Parent=gene-LNP58_RS16795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=LNP58_RS16795;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,3537345;transl_table=11 NZ_CP086372.1 RefSeq gene 3539471 3541846 . + . ID=gene-LNP58_RS16800;Name=LNP58_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16800;old_locus_tag=LNP58_16770 NZ_CP086372.1 Protein Homology CDS 3539471 3541846 . + 0 ID=cds-WP_011408994.1;Parent=gene-LNP58_RS16800;Dbxref=Genbank:WP_011408994.1;Name=WP_011408994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302217.1;locus_tag=LNP58_RS16800;product=glycoside hydrolase family 127 protein;protein_id=WP_011408994.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3541961 3542494 . - . ID=gene-LNP58_RS16805;Name=LNP58_RS16805;end_range=3542494,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16805;old_locus_tag=LNP58_16775;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3541961 3542494 . - 0 ID=cds-LNP58_RS16805;Parent=gene-LNP58_RS16805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3542494,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557936.1;locus_tag=LNP58_RS16805;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3542522 3543556 . - . ID=gene-LNP58_RS16810;Name=LNP58_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16810;old_locus_tag=LNP58_16780 NZ_CP086372.1 Protein Homology CDS 3542522 3543556 . - 0 ID=cds-WP_011407587.1-4;Parent=gene-LNP58_RS16810;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=LNP58_RS16810;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3543612 3543875 . - . ID=gene-LNP58_RS16815;Name=LNP58_RS16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16815;old_locus_tag=LNP58_16785;partial=true;pseudo=true;start_range=.,3543612 NZ_CP086372.1 Protein Homology CDS 3543612 3543875 . - 0 ID=cds-LNP58_RS16815;Parent=gene-LNP58_RS16815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS16815;partial=true;product=transposase;pseudo=true;start_range=.,3543612;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3543949 3544371 . + . ID=gene-LNP58_RS16820;Name=LNP58_RS16820;end_range=3544371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16820;old_locus_tag=LNP58_16790;partial=true;pseudo=true;start_range=.,3543949 NZ_CP086372.1 Protein Homology CDS 3543949 3544371 . + 0 ID=cds-LNP58_RS16820;Parent=gene-LNP58_RS16820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3544371,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257700.1;locus_tag=LNP58_RS16820;partial=true;product=transposase;pseudo=true;start_range=.,3543949;transl_table=11 NZ_CP086372.1 RefSeq gene 3544394 3545629 . - . ID=gene-LNP58_RS16825;Name=LNP58_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16825;old_locus_tag=LNP58_16795 NZ_CP086372.1 Protein Homology CDS 3544394 3545629 . - 0 ID=cds-WP_011408991.1;Parent=gene-LNP58_RS16825;Dbxref=Genbank:WP_011408991.1;Name=WP_011408991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS16825;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011408991.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3545906 3546022 . - . ID=gene-LNP58_RS16830;Name=LNP58_RS16830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16830;old_locus_tag=LNP58_16800;partial=true;pseudo=true;start_range=.,3545906 NZ_CP086372.1 Protein Homology CDS 3545906 3546022 . - 0 ID=cds-LNP58_RS16830;Parent=gene-LNP58_RS16830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380753.1;locus_tag=LNP58_RS16830;partial=true;product=DUF1264 domain-containing protein;pseudo=true;start_range=.,3545906;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3546035 3547000 . - . ID=gene-LNP58_RS16835;Name=LNP58_RS16835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16835;old_locus_tag=LNP58_16805;pseudo=true NZ_CP086372.1 Protein Homology CDS 3546035 3547000 . - 0 ID=cds-LNP58_RS16835;Parent=gene-LNP58_RS16835;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS16835;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3547236 3547619 . + . ID=gene-LNP58_RS16840;Name=LNP58_RS16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16840;old_locus_tag=LNP58_16810;partial=true;pseudo=true;start_range=.,3547236 NZ_CP086372.1 Protein Homology CDS 3547236 3547619 . + 0 ID=cds-LNP58_RS16840;Parent=gene-LNP58_RS16840;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970070.1;locus_tag=LNP58_RS16840;partial=true;product=exodeoxyribonuclease III;pseudo=true;start_range=.,3547236;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3547663 3547935 . - . ID=gene-LNP58_RS16845;Name=LNP58_RS16845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16845;old_locus_tag=LNP58_16815;partial=true;pseudo=true;start_range=.,3547663 NZ_CP086372.1 Protein Homology CDS 3547663 3547935 . - 0 ID=cds-LNP58_RS16845;Parent=gene-LNP58_RS16845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158292.1;locus_tag=LNP58_RS16845;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3547663;transl_table=11 NZ_CP086372.1 RefSeq gene 3548120 3549394 . + . ID=gene-LNP58_RS16850;Name=LNP58_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16850;old_locus_tag=LNP58_16820 NZ_CP086372.1 Protein Homology CDS 3548120 3549394 . + 0 ID=cds-WP_173340398.1;Parent=gene-LNP58_RS16850;Dbxref=Genbank:WP_173340398.1;Name=WP_173340398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160124.1;locus_tag=LNP58_RS16850;product=molybdopterin molybdotransferase MoeA;protein_id=WP_173340398.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3549432 3550001 . + . ID=gene-LNP58_RS16855;Name=LNP58_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16855;old_locus_tag=LNP58_16825 NZ_CP086372.1 Protein Homology CDS 3549432 3550001 . + 0 ID=cds-WP_011408988.1;Parent=gene-LNP58_RS16855;Dbxref=Genbank:WP_011408988.1;Name=WP_011408988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575382.1;locus_tag=LNP58_RS16855;product=molybdenum cofactor guanylyltransferase;protein_id=WP_011408988.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3549985 3550347 . + . ID=gene-LNP58_RS16860;Name=LNP58_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16860;old_locus_tag=LNP58_16830 NZ_CP086372.1 Protein Homology CDS 3549985 3550347 . + 0 ID=cds-WP_011408987.1;Parent=gene-LNP58_RS16860;Dbxref=Genbank:WP_011408987.1;Name=WP_011408987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158289.1;locus_tag=LNP58_RS16860;product=hypothetical protein;protein_id=WP_011408987.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3550581 3551653 . + . ID=gene-LNP58_RS23430;Name=LNP58_RS23430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23430;old_locus_tag=LNP58_16835;pseudo=true NZ_CP086372.1 Protein Homology CDS 3550581 3551653 . + 0 ID=cds-LNP58_RS23430;Parent=gene-LNP58_RS23430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158288.1;locus_tag=LNP58_RS23430;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3551741 3551959 . - . ID=gene-LNP58_RS16875;Name=LNP58_RS16875;end_range=3551959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16875;old_locus_tag=LNP58_16840;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3551741 3551959 . - 0 ID=cds-LNP58_RS16875;Parent=gene-LNP58_RS16875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3551959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575387.1;locus_tag=LNP58_RS16875;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3551935 3552405 . - . ID=gene-LNP58_RS16880;Name=LNP58_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16880;old_locus_tag=LNP58_16845;partial=true;pseudo=true;start_range=.,3551935 NZ_CP086372.1 Protein Homology CDS 3551935 3552405 . - 0 ID=cds-LNP58_RS16880;Parent=gene-LNP58_RS16880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160123.1;locus_tag=LNP58_RS16880;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;start_range=.,3551935;transl_table=11 NZ_CP086372.1 RefSeq gene 3552744 3553721 . - . ID=gene-LNP58_RS16885;Name=LNP58_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16885;old_locus_tag=LNP58_16850 NZ_CP086372.1 Protein Homology CDS 3552744 3553721 . - 0 ID=cds-WP_011408985.1;Parent=gene-LNP58_RS16885;Dbxref=Genbank:WP_011408985.1;Name=WP_011408985.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503383.1;locus_tag=LNP58_RS16885;product=SAM-dependent methyltransferase;protein_id=WP_011408985.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3553806 3554363 . + . ID=gene-LNP58_RS16890;Name=LNP58_RS16890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16890;old_locus_tag=LNP58_16855;pseudo=true NZ_CP086372.1 Protein Homology CDS 3553806 3554363 . + 0 ID=cds-LNP58_RS16890;Parent=gene-LNP58_RS16890;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575394.1;locus_tag=LNP58_RS16890;product=ANTAR domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3554449 3554840 . + . ID=gene-LNP58_RS16895;Name=LNP58_RS16895;end_range=3554840,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16895;old_locus_tag=LNP58_16860;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3554449 3554840 . + 0 ID=cds-LNP58_RS16895;Parent=gene-LNP58_RS16895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3554840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009596539.1;locus_tag=LNP58_RS16895;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3554929 3555894 . + . ID=gene-LNP58_RS16900;Name=LNP58_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16900;old_locus_tag=LNP58_16865 NZ_CP086372.1 Protein Homology CDS 3554929 3555894 . + 0 ID=cds-WP_109182067.1-3;Parent=gene-LNP58_RS16900;Dbxref=Genbank:WP_109182067.1;Name=WP_109182067.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS16900;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182067.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3556175 3556615 . + . ID=gene-LNP58_RS16905;Name=LNP58_RS16905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16905;old_locus_tag=LNP58_16870;partial=true;pseudo=true;start_range=.,3556175 NZ_CP086372.1 Protein Homology CDS 3556175 3556615 . + 0 ID=cds-LNP58_RS16905;Parent=gene-LNP58_RS16905;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169078.1;locus_tag=LNP58_RS16905;partial=true;product=nitrate ABC transporter substrate-binding protein;pseudo=true;start_range=.,3556175;transl_table=11 NZ_CP086372.1 RefSeq gene 3556878 3557840 . - . ID=gene-LNP58_RS16910;Name=LNP58_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16910;old_locus_tag=LNP58_16875 NZ_CP086372.1 Protein Homology CDS 3556878 3557840 . - 0 ID=cds-WP_011408981.1;Parent=gene-LNP58_RS16910;Dbxref=Genbank:WP_011408981.1;Name=WP_011408981.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS16910;product=IS1595-like element ISXo2 family transposase;protein_id=WP_011408981.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3557990 3559309 . - . ID=gene-LNP58_RS16915;Name=LNP58_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16915;old_locus_tag=LNP58_16880 NZ_CP086372.1 Protein Homology CDS 3557990 3559309 . - 0 ID=cds-WP_115840162.1;Parent=gene-LNP58_RS16915;Dbxref=Genbank:WP_115840162.1;Name=WP_115840162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS16915;product=IS701-like element ISXo15 family transposase;protein_id=WP_115840162.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3559446 3560414 . + . ID=gene-LNP58_RS16920;Name=LNP58_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16920;old_locus_tag=LNP58_16885 NZ_CP086372.1 Protein Homology CDS 3559446 3560414 . + 0 ID=cds-WP_011258802.1-11;Parent=gene-LNP58_RS16920;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS16920;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3560730 3561713 . - . ID=gene-LNP58_RS16925;Name=LNP58_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16925;old_locus_tag=LNP58_16890 NZ_CP086372.1 Protein Homology CDS 3560730 3561713 . - 0 ID=cds-WP_011408980.1;Parent=gene-LNP58_RS16925;Dbxref=Genbank:WP_011408980.1;Name=WP_011408980.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS16925;product=IS5 family transposase;protein_id=WP_011408980.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3562153 3562410 . + . ID=gene-LNP58_RS16930;Name=LNP58_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16930;old_locus_tag=LNP58_16895 NZ_CP086372.1 Protein Homology CDS 3562153 3562410 . + 0 ID=cds-WP_011408979.1;Parent=gene-LNP58_RS16930;Dbxref=Genbank:WP_011408979.1;Name=WP_011408979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812907.1;locus_tag=LNP58_RS16930;product=stress-induced protein;protein_id=WP_011408979.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3562650 3563645 . - . ID=gene-LNP58_RS16935;Name=LNP58_RS16935;end_range=3563645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16935;old_locus_tag=LNP58_16900;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3562650 3563645 . - 0 ID=cds-LNP58_RS16935;Parent=gene-LNP58_RS16935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3563645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS16935;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3563710 3564945 . + . ID=gene-LNP58_RS16940;Name=LNP58_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16940;old_locus_tag=LNP58_16905 NZ_CP086372.1 Protein Homology CDS 3563710 3564945 . + 0 ID=cds-WP_011259629.1;Parent=gene-LNP58_RS16940;Dbxref=Genbank:WP_011259629.1;Name=WP_011259629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS16940;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011259629.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3564955 3565290 . - . ID=gene-LNP58_RS16945;Name=LNP58_RS16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS16945;old_locus_tag=LNP58_16910;partial=true;pseudo=true;start_range=.,3564955 NZ_CP086372.1 Protein Homology CDS 3564955 3565290 . - 0 ID=cds-LNP58_RS16945;Parent=gene-LNP58_RS16945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS16945;partial=true;product=transposase;pseudo=true;start_range=.,3564955;transl_table=11 NZ_CP086372.1 RefSeq gene 3565702 3566355 . - . ID=gene-LNP58_RS16950;Name=LNP58_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16950;old_locus_tag=LNP58_16915 NZ_CP086372.1 Protein Homology CDS 3565702 3566355 . - 0 ID=cds-WP_027703968.1;Parent=gene-LNP58_RS16950;Dbxref=Genbank:WP_027703968.1;Name=WP_027703968.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408977.1;locus_tag=LNP58_RS16950;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_027703968.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3566617 3566700 . - . ID=gene-LNP58_RS16955;Name=LNP58_RS16955;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS16955;old_locus_tag=LNP58_16920 NZ_CP086372.1 tRNAscan-SE tRNA 3566617 3566700 . - . ID=rna-LNP58_RS16955;Parent=gene-LNP58_RS16955;anticodon=(pos:complement(3566664..3566666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16955;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 3566617 3566700 . - . ID=exon-LNP58_RS16955-1;Parent=rna-LNP58_RS16955;anticodon=(pos:complement(3566664..3566666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS16955;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 3566842 3568134 . + . ID=gene-LNP58_RS16960;Name=LNP58_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16960;old_locus_tag=LNP58_16925 NZ_CP086372.1 Protein Homology CDS 3566842 3568134 . + 0 ID=cds-WP_011408976.1;Parent=gene-LNP58_RS16960;Dbxref=Genbank:WP_011408976.1;Name=WP_011408976.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503478.1;locus_tag=LNP58_RS16960;product=nucleotide sugar dehydrogenase;protein_id=WP_011408976.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3568118 3569380 . - . ID=gene-LNP58_RS16965;Name=LNP58_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16965;old_locus_tag=LNP58_16930 NZ_CP086372.1 Protein Homology CDS 3568118 3569380 . - 0 ID=cds-WP_011259625.1;Parent=gene-LNP58_RS16965;Dbxref=Genbank:WP_011259625.1;Name=WP_011259625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378776.1;locus_tag=LNP58_RS16965;product=TIGR03862 family flavoprotein;protein_id=WP_011259625.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3569392 3569823 . - . ID=gene-LNP58_RS16970;Name=LNP58_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16970;old_locus_tag=LNP58_16935 NZ_CP086372.1 Protein Homology CDS 3569392 3569823 . - 0 ID=cds-WP_011408975.1;Parent=gene-LNP58_RS16970;Dbxref=Genbank:WP_011408975.1;Name=WP_011408975.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156625.1;locus_tag=LNP58_RS16970;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011408975.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3569882 3570247 . + . ID=gene-LNP58_RS16975;Name=LNP58_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16975;old_locus_tag=LNP58_16940 NZ_CP086372.1 Protein Homology CDS 3569882 3570247 . + 0 ID=cds-WP_011408974.1;Parent=gene-LNP58_RS16975;Dbxref=Genbank:WP_011408974.1;Name=WP_011408974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301518.1;locus_tag=LNP58_RS16975;product=DUF6164 family protein;protein_id=WP_011408974.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3570381 3571349 . + . ID=gene-LNP58_RS16980;Name=LNP58_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16980;old_locus_tag=LNP58_16945 NZ_CP086372.1 Protein Homology CDS 3570381 3571349 . + 0 ID=cds-WP_011257031.1-3;Parent=gene-LNP58_RS16980;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS16980;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3571507 3572268 . + . ID=gene-LNP58_RS16985;Name=LNP58_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16985;old_locus_tag=LNP58_16950 NZ_CP086372.1 Protein Homology CDS 3571507 3572268 . + 0 ID=cds-WP_011408973.1;Parent=gene-LNP58_RS16985;Dbxref=Genbank:WP_011408973.1;Name=WP_011408973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373348.1;locus_tag=LNP58_RS16985;product=sulfurtransferase;protein_id=WP_011408973.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3572490 3573137 . + . ID=gene-LNP58_RS16990;Name=LNP58_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16990;old_locus_tag=LNP58_16955 NZ_CP086372.1 Protein Homology CDS 3572490 3573137 . + 0 ID=cds-WP_012445389.1;Parent=gene-LNP58_RS16990;Dbxref=Genbank:WP_012445389.1;Name=WP_012445389.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408972.1;locus_tag=LNP58_RS16990;product=response regulator;protein_id=WP_012445389.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3573241 3574004 . + . ID=gene-LNP58_RS16995;Name=LNP58_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS16995;old_locus_tag=LNP58_16960 NZ_CP086372.1 Protein Homology CDS 3573241 3573556 . + 0 ID=cds-WP_094187765.1;Parent=gene-LNP58_RS16995;Dbxref=Genbank:WP_094187765.1;Name=WP_094187765.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS16995;product=IS5 family transposase;protein_id=WP_094187765.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3573556 3574004 . + 2 ID=cds-WP_094187765.1;Parent=gene-LNP58_RS16995;Dbxref=Genbank:WP_094187765.1;Name=WP_094187765.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS16995;product=IS5 family transposase;protein_id=WP_094187765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3574530 3578246 . - . ID=gene-LNP58_RS17000;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=LNP58_RS17000;old_locus_tag=LNP58_16965 NZ_CP086372.1 Protein Homology CDS 3574530 3578246 . - 0 ID=cds-WP_012445388.1;Parent=gene-LNP58_RS17000;Dbxref=Genbank:WP_012445388.1;Name=WP_012445388.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408969.1;locus_tag=LNP58_RS17000;product=ribonuclease E;protein_id=WP_012445388.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3578648 3579634 . + . ID=gene-LNP58_RS17005;Name=LNP58_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17005;old_locus_tag=LNP58_16970 NZ_CP086372.1 Protein Homology CDS 3578648 3579634 . + 0 ID=cds-WP_027704269.1;Parent=gene-LNP58_RS17005;Dbxref=Genbank:WP_027704269.1;Name=WP_027704269.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303869.1;locus_tag=LNP58_RS17005;product=RluA family pseudouridine synthase;protein_id=WP_027704269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3579667 3581484 . - . ID=gene-LNP58_RS17010;Name=LNP58_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17010;old_locus_tag=LNP58_16975 NZ_CP086372.1 Protein Homology CDS 3579667 3581484 . - 0 ID=cds-WP_171970841.1;Parent=gene-LNP58_RS17010;Dbxref=Genbank:WP_171970841.1;Name=WP_171970841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259618.1;locus_tag=LNP58_RS17010;product=DUF3300 domain-containing protein;protein_id=WP_171970841.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3581800 3582278 . - . ID=gene-LNP58_RS17015;Name=LNP58_RS17015;end_range=3582278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17015;old_locus_tag=LNP58_16980;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3581800 3582278 . - 0 ID=cds-LNP58_RS17015;Parent=gene-LNP58_RS17015;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0016020;end_range=3582278,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575667.1;locus_tag=LNP58_RS17015;partial=true;product=ZIP family metal transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3582336 3582758 . - . ID=gene-LNP58_RS17020;Name=LNP58_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17020;old_locus_tag=LNP58_16985 NZ_CP086372.1 Protein Homology CDS 3582336 3582758 . - 0 ID=cds-WP_012445383.1;Parent=gene-LNP58_RS17020;Dbxref=Genbank:WP_012445383.1;Name=WP_012445383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259617.1;locus_tag=LNP58_RS17020;product=energy transducer TonB;protein_id=WP_012445383.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3582755 3583111 . - . ID=gene-LNP58_RS17025;Name=LNP58_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17025;old_locus_tag=LNP58_16990 NZ_CP086372.1 Protein Homology CDS 3582755 3583111 . - 0 ID=cds-WP_012445382.1;Parent=gene-LNP58_RS17025;Dbxref=Genbank:WP_012445382.1;Name=WP_012445382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445382.1;locus_tag=LNP58_RS17025;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_012445382.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3583199 3583798 . + . ID=gene-LNP58_RS17030;Name=LNP58_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17030;old_locus_tag=LNP58_16995 NZ_CP086372.1 Protein Homology CDS 3583199 3583798 . + 0 ID=cds-WP_012445381.1;Parent=gene-LNP58_RS17030;Dbxref=Genbank:WP_012445381.1;Name=WP_012445381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410314.1;locus_tag=LNP58_RS17030;product=NfuA family Fe-S biogenesis protein;protein_id=WP_012445381.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3583812 3585635 . + . ID=gene-LNP58_RS17035;Name=LNP58_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17035;old_locus_tag=LNP58_17000 NZ_CP086372.1 Protein Homology CDS 3583812 3585635 . + 0 ID=cds-WP_075242287.1;Parent=gene-LNP58_RS17035;Dbxref=Genbank:WP_075242287.1;Name=WP_075242287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445380.1;locus_tag=LNP58_RS17035;product=transmembrane repetitive protein;protein_id=WP_075242287.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3585801 3586055 . + . ID=gene-LNP58_RS17040;Name=LNP58_RS17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17040;old_locus_tag=LNP58_17005;partial=true;pseudo=true;start_range=.,3585801 NZ_CP086372.1 Protein Homology CDS 3585801 3586055 . + 0 ID=cds-LNP58_RS17040;Parent=gene-LNP58_RS17040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=LNP58_RS17040;partial=true;product=transposase;pseudo=true;start_range=.,3585801;transl_table=11 NZ_CP086372.1 RefSeq gene 3586117 3586296 . + . ID=gene-LNP58_RS17045;Name=LNP58_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17045;old_locus_tag=LNP58_17010 NZ_CP086372.1 GeneMarkS-2+ CDS 3586117 3586296 . + 0 ID=cds-WP_075240368.1;Parent=gene-LNP58_RS17045;Dbxref=Genbank:WP_075240368.1;Name=WP_075240368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17045;product=hypothetical protein;protein_id=WP_075240368.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3586293 3589127 . + . ID=gene-LNP58_RS17050;Name=LNP58_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17050;old_locus_tag=LNP58_17015 NZ_CP086372.1 Protein Homology CDS 3586293 3589127 . + 0 ID=cds-WP_042465052.1;Parent=gene-LNP58_RS17050;Dbxref=Genbank:WP_042465052.1;Name=WP_042465052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445373.1;locus_tag=LNP58_RS17050;product=hypothetical protein;protein_id=WP_042465052.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3589156 3589902 . + . ID=gene-LNP58_RS17055;Name=LNP58_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17055;old_locus_tag=LNP58_17020 NZ_CP086372.1 Protein Homology CDS 3589156 3589902 . + 0 ID=cds-WP_042465640.1;Parent=gene-LNP58_RS17055;Dbxref=Genbank:WP_042465640.1;Name=WP_042465640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807738.1;locus_tag=LNP58_RS17055;product=hypothetical protein;protein_id=WP_042465640.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3589977 3592214 . + . ID=gene-LNP58_RS17060;Name=LNP58_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17060;old_locus_tag=LNP58_17025 NZ_CP086372.1 Protein Homology CDS 3589977 3592214 . + 0 ID=cds-WP_228329667.1;Parent=gene-LNP58_RS17060;Dbxref=Genbank:WP_228329667.1;Name=WP_228329667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408803.1;locus_tag=LNP58_RS17060;product=hypothetical protein;protein_id=WP_228329667.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3592205 3593161 . - . ID=gene-LNP58_RS17065;Name=LNP58_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17065;old_locus_tag=LNP58_17030 NZ_CP086372.1 Protein Homology CDS 3592205 3593161 . - 0 ID=cds-WP_228329660.1-2;Parent=gene-LNP58_RS17065;Dbxref=Genbank:WP_228329660.1;Name=WP_228329660.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS17065;product=IS30-like element IS1112b family transposase;protein_id=WP_228329660.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3593351 3594088 . + . ID=gene-LNP58_RS17070;Name=LNP58_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17070;old_locus_tag=LNP58_17035 NZ_CP086372.1 Protein Homology CDS 3593351 3594088 . + 0 ID=cds-WP_011259611.1;Parent=gene-LNP58_RS17070;Dbxref=Genbank:WP_011259611.1;Name=WP_011259611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259611.1;locus_tag=LNP58_RS17070;product=hypothetical protein;protein_id=WP_011259611.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3594113 3596029 . + . ID=gene-LNP58_RS17075;Name=LNP58_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17075;old_locus_tag=LNP58_17040 NZ_CP086372.1 Protein Homology CDS 3594113 3596029 . + 0 ID=cds-WP_011408960.1;Parent=gene-LNP58_RS17075;Dbxref=Genbank:WP_011408960.1;Name=WP_011408960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444485.1;locus_tag=LNP58_RS17075;product=hypothetical protein;protein_id=WP_011408960.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3596081 3597049 . + . ID=gene-LNP58_RS17080;Name=LNP58_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17080;old_locus_tag=LNP58_17045 NZ_CP086372.1 Protein Homology CDS 3596081 3597049 . + 0 ID=cds-WP_011258802.1-12;Parent=gene-LNP58_RS17080;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS17080;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3597235 3598470 . - . ID=gene-LNP58_RS17085;Name=LNP58_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17085;old_locus_tag=LNP58_17050 NZ_CP086372.1 Protein Homology CDS 3597235 3598470 . - 0 ID=cds-WP_011260830.1;Parent=gene-LNP58_RS17085;Dbxref=Genbank:WP_011260830.1;Name=WP_011260830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS17085;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011260830.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3598641 3599959 . - . ID=gene-LNP58_RS17090;Name=LNP58_RS17090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17090;old_locus_tag=LNP58_17055;pseudo=true NZ_CP086372.1 Protein Homology CDS 3598641 3599959 . - 0 ID=cds-LNP58_RS17090;Parent=gene-LNP58_RS17090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS17090;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3600095 3601063 . + . ID=gene-LNP58_RS17095;Name=LNP58_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17095;old_locus_tag=LNP58_17060 NZ_CP086372.1 Protein Homology CDS 3600095 3601063 . + 0 ID=cds-WP_011257031.1-4;Parent=gene-LNP58_RS17095;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS17095;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3601785 3601928 . + . ID=gene-LNP58_RS17100;Name=LNP58_RS17100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17100;old_locus_tag=LNP58_17065;partial=true;pseudo=true;start_range=.,3601785 NZ_CP086372.1 Protein Homology CDS 3601785 3601928 . + 0 ID=cds-LNP58_RS17100;Parent=gene-LNP58_RS17100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611206.1;locus_tag=LNP58_RS17100;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3601785;transl_table=11 NZ_CP086372.1 RefSeq gene 3602422 3602928 . + . ID=gene-LNP58_RS17105;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LNP58_RS17105;old_locus_tag=LNP58_17070 NZ_CP086372.1 Protein Homology CDS 3602422 3602928 . + 0 ID=cds-WP_024711387.1;Parent=gene-LNP58_RS17105;Dbxref=Genbank:WP_024711387.1;Name=WP_024711387.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467682.1;locus_tag=LNP58_RS17105;product=type VI secretion system contractile sheath small subunit;protein_id=WP_024711387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3602921 3604435 . + . ID=gene-LNP58_RS17110;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LNP58_RS17110;old_locus_tag=LNP58_17075 NZ_CP086372.1 Protein Homology CDS 3602921 3604435 . + 0 ID=cds-WP_027703472.1;Parent=gene-LNP58_RS17110;Dbxref=Genbank:WP_027703472.1;Name=WP_027703472.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300089.1;locus_tag=LNP58_RS17110;product=type VI secretion system contractile sheath large subunit;protein_id=WP_027703472.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3604535 3605038 . + . ID=gene-LNP58_RS17115;Name=LNP58_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17115;old_locus_tag=LNP58_17080 NZ_CP086372.1 Protein Homology CDS 3604535 3605038 . + 0 ID=cds-WP_011259605.1;Parent=gene-LNP58_RS17115;Dbxref=Genbank:WP_011259605.1;Name=WP_011259605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572542.1;locus_tag=LNP58_RS17115;product=type VI secretion system tube protein Hcp;protein_id=WP_011259605.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3605074 3605907 . + . ID=gene-LNP58_RS17120;Name=LNP58_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17120;old_locus_tag=LNP58_17085 NZ_CP086372.1 Protein Homology CDS 3605074 3605907 . + 0 ID=cds-WP_011259604.1;Parent=gene-LNP58_RS17120;Dbxref=Genbank:WP_011259604.1;Name=WP_011259604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373429.1;locus_tag=LNP58_RS17120;product=type VI secretion system accessory protein TagJ;protein_id=WP_011259604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3605895 3606398 . + . ID=gene-LNP58_RS17125;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LNP58_RS17125;old_locus_tag=LNP58_17090 NZ_CP086372.1 Protein Homology CDS 3605895 3606398 . + 0 ID=cds-WP_011259603.1;Parent=gene-LNP58_RS17125;Dbxref=Genbank:WP_011259603.1;Name=WP_011259603.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300091.1;locus_tag=LNP58_RS17125;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011259603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3606402 3608279 . + . ID=gene-LNP58_RS17130;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LNP58_RS17130;old_locus_tag=LNP58_17095 NZ_CP086372.1 Protein Homology CDS 3606402 3608279 . + 0 ID=cds-WP_011259602.1;Parent=gene-LNP58_RS17130;Dbxref=Genbank:WP_011259602.1;Name=WP_011259602.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571950.1;locus_tag=LNP58_RS17130;product=type VI secretion system baseplate subunit TssF;protein_id=WP_011259602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3608243 3609253 . + . ID=gene-LNP58_RS17135;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LNP58_RS17135;old_locus_tag=LNP58_17100 NZ_CP086372.1 Protein Homology CDS 3608243 3609253 . + 0 ID=cds-WP_011408954.1;Parent=gene-LNP58_RS17135;Dbxref=Genbank:WP_011408954.1;Name=WP_011408954.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113157.1;locus_tag=LNP58_RS17135;product=type VI secretion system baseplate subunit TssG;protein_id=WP_011408954.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3609286 3611991 . + . ID=gene-LNP58_RS17140;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LNP58_RS17140;old_locus_tag=LNP58_17105 NZ_CP086372.1 Protein Homology CDS 3609286 3611991 . + 0 ID=cds-WP_011408953.1;Parent=gene-LNP58_RS17140;Dbxref=Genbank:WP_011408953.1;Name=WP_011408953.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159435.1;locus_tag=LNP58_RS17140;product=type VI secretion system ATPase TssH;protein_id=WP_011408953.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3612180 3612677 . + . ID=gene-LNP58_RS17145;Name=LNP58_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17145;old_locus_tag=LNP58_17110 NZ_CP086372.1 Protein Homology CDS 3612180 3612677 . + 0 ID=cds-WP_027703476.1;Parent=gene-LNP58_RS17145;Dbxref=Genbank:WP_027703476.1;Name=WP_027703476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159434.1;locus_tag=LNP58_RS17145;product=hypothetical protein;protein_id=WP_027703476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3612743 3613237 . + . ID=gene-LNP58_RS17150;Name=LNP58_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17150;old_locus_tag=LNP58_17115 NZ_CP086372.1 GeneMarkS-2+ CDS 3612743 3613237 . + 0 ID=cds-WP_125168760.1;Parent=gene-LNP58_RS17150;Dbxref=Genbank:WP_125168760.1;Name=WP_125168760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17150;product=hypothetical protein;protein_id=WP_125168760.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3613297 3613482 . + . ID=gene-LNP58_RS17155;Name=LNP58_RS17155;end_range=3613482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17155;old_locus_tag=LNP58_17120;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3613297 3613482 . + 0 ID=cds-LNP58_RS17155;Parent=gene-LNP58_RS17155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3613482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS17155;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3613623 3614081 . + . ID=gene-LNP58_RS17160;Name=LNP58_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17160;old_locus_tag=LNP58_17125 NZ_CP086372.1 Protein Homology CDS 3613623 3614081 . + 0 ID=cds-WP_011408952.1;Parent=gene-LNP58_RS17160;Dbxref=Genbank:WP_011408952.1;Name=WP_011408952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118730.1;locus_tag=LNP58_RS17160;product=hypothetical protein;protein_id=WP_011408952.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3614346 3616283 . + . ID=gene-LNP58_RS17165;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LNP58_RS17165;old_locus_tag=LNP58_17130 NZ_CP086372.1 Protein Homology CDS 3614346 3616283 . + 0 ID=cds-WP_012444497.1;Parent=gene-LNP58_RS17165;Dbxref=Genbank:WP_012444497.1;Name=WP_012444497.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378659.1;locus_tag=LNP58_RS17165;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_012444497.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3616292 3616831 . + . ID=gene-LNP58_RS17170;Name=LNP58_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17170;old_locus_tag=LNP58_17135 NZ_CP086372.1 Protein Homology CDS 3616292 3616831 . + 0 ID=cds-WP_011408951.1;Parent=gene-LNP58_RS17170;Dbxref=Genbank:WP_011408951.1;Name=WP_011408951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373413.1;locus_tag=LNP58_RS17170;product=hypothetical protein;protein_id=WP_011408951.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3616828 3618252 . + . ID=gene-LNP58_RS17175;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LNP58_RS17175;old_locus_tag=LNP58_17140 NZ_CP086372.1 Protein Homology CDS 3616828 3618252 . + 0 ID=cds-WP_069964828.1;Parent=gene-LNP58_RS17175;Dbxref=Genbank:WP_069964828.1;Name=WP_069964828.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113159.1;locus_tag=LNP58_RS17175;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_069964828.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3618249 3619586 . + . ID=gene-LNP58_RS17180;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LNP58_RS17180;old_locus_tag=LNP58_17145 NZ_CP086372.1 Protein Homology CDS 3618249 3619586 . + 0 ID=cds-WP_229001905.1;Parent=gene-LNP58_RS17180;Dbxref=Genbank:WP_229001905.1;Name=WP_229001905.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373410.1;locus_tag=LNP58_RS17180;product=type VI secretion system baseplate subunit TssK;protein_id=WP_229001905.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3619588 3620904 . + . ID=gene-LNP58_RS17185;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LNP58_RS17185;old_locus_tag=LNP58_17150 NZ_CP086372.1 Protein Homology CDS 3619588 3620904 . + 0 ID=cds-WP_044756716.1;Parent=gene-LNP58_RS17185;Dbxref=Genbank:WP_044756716.1;Name=WP_044756716.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373409.1;locus_tag=LNP58_RS17185;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_044756716.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3620908 3624366 . + . ID=gene-LNP58_RS17190;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LNP58_RS17190;old_locus_tag=LNP58_17155 NZ_CP086372.1 Protein Homology CDS 3620908 3624366 . + 0 ID=cds-WP_044756717.1;Parent=gene-LNP58_RS17190;Dbxref=Genbank:WP_044756717.1;Name=WP_044756717.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113161.1;locus_tag=LNP58_RS17190;product=type VI secretion system membrane subunit TssM;protein_id=WP_044756717.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3624363 3625010 . + . ID=gene-LNP58_RS17195;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LNP58_RS17195;old_locus_tag=LNP58_17160 NZ_CP086372.1 Protein Homology CDS 3624363 3625010 . + 0 ID=cds-WP_041182189.1;Parent=gene-LNP58_RS17195;Dbxref=Genbank:WP_041182189.1;Name=WP_041182189.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373406.1;locus_tag=LNP58_RS17195;product=type VI secretion system-associated protein TagF;protein_id=WP_041182189.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3625007 3625729 . + . ID=gene-LNP58_RS17200;Name=LNP58_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17200;old_locus_tag=LNP58_17165 NZ_CP086372.1 Protein Homology CDS 3625007 3625729 . + 0 ID=cds-WP_011259593.1;Parent=gene-LNP58_RS17200;Dbxref=Genbank:WP_011259593.1;Name=WP_011259593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347368.1;locus_tag=LNP58_RS17200;product=serine/threonine-protein phosphatase;protein_id=WP_011259593.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3625726 3628629 . + . ID=gene-LNP58_RS17205;Name=LNP58_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17205;old_locus_tag=LNP58_17170 NZ_CP086372.1 Protein Homology CDS 3625726 3628629 . + 0 ID=cds-WP_027703483.1;Parent=gene-LNP58_RS17205;Dbxref=Genbank:WP_027703483.1;Name=WP_027703483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259592.1;locus_tag=LNP58_RS17205;product=bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein;protein_id=WP_027703483.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3628626 3628952 . + . ID=gene-LNP58_RS17210;Name=LNP58_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17210;old_locus_tag=LNP58_17175 NZ_CP086372.1 Protein Homology CDS 3628626 3628952 . + 0 ID=cds-WP_012444504.1;Parent=gene-LNP58_RS17210;Dbxref=Genbank:WP_012444504.1;Name=WP_012444504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300105.1;locus_tag=LNP58_RS17210;product=hypothetical protein;protein_id=WP_012444504.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3629012 3629810 . - . ID=gene-LNP58_RS17215;Name=LNP58_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17215;old_locus_tag=LNP58_17180 NZ_CP086372.1 Protein Homology CDS 3629539 3629810 . - 0 ID=cds-WP_109181978.1;Parent=gene-LNP58_RS17215;Dbxref=Genbank:WP_109181978.1;Name=WP_109181978.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17215;product=IS5 family transposase;protein_id=WP_109181978.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3629012 3629540 . - 1 ID=cds-WP_109181978.1;Parent=gene-LNP58_RS17215;Dbxref=Genbank:WP_109181978.1;Name=WP_109181978.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17215;product=IS5 family transposase;protein_id=WP_109181978.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3629872 3630670 . - . ID=gene-LNP58_RS17220;Name=LNP58_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17220;old_locus_tag=LNP58_17185 NZ_CP086372.1 Protein Homology CDS 3630399 3630670 . - 0 ID=cds-WP_109181977.1;Parent=gene-LNP58_RS17220;Dbxref=Genbank:WP_109181977.1;Name=WP_109181977.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17220;product=IS5 family transposase;protein_id=WP_109181977.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3629872 3630400 . - 1 ID=cds-WP_109181977.1;Parent=gene-LNP58_RS17220;Dbxref=Genbank:WP_109181977.1;Name=WP_109181977.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17220;product=IS5 family transposase;protein_id=WP_109181977.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3630837 3631865 . - . ID=gene-LNP58_RS17225;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LNP58_RS17225;old_locus_tag=LNP58_17190 NZ_CP086372.1 Protein Homology CDS 3630837 3631865 . - 0 ID=cds-WP_011408942.1;Parent=gene-LNP58_RS17225;Dbxref=Genbank:WP_011408942.1;Name=WP_011408942.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444505.1;locus_tag=LNP58_RS17225;product=type VI secretion system protein TssA;protein_id=WP_011408942.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3631874 3632854 . - . ID=gene-LNP58_RS17230;Name=LNP58_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17230;old_locus_tag=LNP58_17195 NZ_CP086372.1 Protein Homology CDS 3631874 3632854 . - 0 ID=cds-WP_011259590.1;Parent=gene-LNP58_RS17230;Dbxref=Genbank:WP_011259590.1;Name=WP_011259590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259590.1;locus_tag=LNP58_RS17230;product=LysR family transcriptional regulator;protein_id=WP_011259590.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3632968 3635427 . - . ID=gene-LNP58_RS17235;Name=LNP58_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17235;old_locus_tag=LNP58_17200 NZ_CP086372.1 Protein Homology CDS 3632968 3635427 . - 0 ID=cds-WP_011259589.1;Parent=gene-LNP58_RS17235;Dbxref=Genbank:WP_011259589.1;Name=WP_011259589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503434.1;locus_tag=LNP58_RS17235;product=two-component system VirA-like sensor kinase;protein_id=WP_011259589.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3635424 3636416 . - . ID=gene-LNP58_RS17240;Name=LNP58_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17240;old_locus_tag=LNP58_17205 NZ_CP086372.1 Protein Homology CDS 3635424 3636416 . - 0 ID=cds-WP_011259588.1;Parent=gene-LNP58_RS17240;Dbxref=Genbank:WP_011259588.1;Name=WP_011259588.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373388.1;locus_tag=LNP58_RS17240;product=c-type cytochrome;protein_id=WP_011259588.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3636413 3637192 . - . ID=gene-LNP58_RS17245;Name=LNP58_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17245;old_locus_tag=LNP58_17210 NZ_CP086372.1 Protein Homology CDS 3636413 3637192 . - 0 ID=cds-WP_011259587.1;Parent=gene-LNP58_RS17245;Dbxref=Genbank:WP_011259587.1;Name=WP_011259587.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503432.1;locus_tag=LNP58_RS17245;product=response regulator;protein_id=WP_011259587.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3637514 3638110 . - . ID=gene-LNP58_RS17250;Name=LNP58_RS17250;end_range=3638110,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17250;old_locus_tag=LNP58_17215;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3637514 3638110 . - 0 ID=cds-LNP58_RS17250;Parent=gene-LNP58_RS17250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3638110,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347473.1;locus_tag=LNP58_RS17250;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3638090 3638985 . + . ID=gene-LNP58_RS17255;Name=LNP58_RS17255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17255;old_locus_tag=LNP58_17220;partial=true;pseudo=true;start_range=.,3638090 NZ_CP086372.1 Protein Homology CDS 3638090 3638985 . + 0 ID=cds-LNP58_RS17255;Parent=gene-LNP58_RS17255;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345585.1;locus_tag=LNP58_RS17255;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3638090;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3639001 3639738 . - . ID=gene-LNP58_RS17260;Name=LNP58_RS17260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17260;old_locus_tag=LNP58_17225;partial=true;pseudo=true;start_range=.,3639001 NZ_CP086372.1 Protein Homology CDS 3639001 3639738 . - 0 ID=cds-LNP58_RS17260;Parent=gene-LNP58_RS17260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS17260;partial=true;product=transposase;pseudo=true;start_range=.,3639001;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3639692 3639847 . + . ID=gene-LNP58_RS17265;Name=LNP58_RS17265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17265;old_locus_tag=LNP58_17230;partial=true;pseudo=true;start_range=.,3639692 NZ_CP086372.1 Protein Homology CDS 3639692 3639847 . + 0 ID=cds-LNP58_RS17265;Parent=gene-LNP58_RS17265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611952.1;locus_tag=LNP58_RS17265;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3639692;transl_table=11 NZ_CP086372.1 RefSeq gene 3640156 3643113 . - . ID=gene-LNP58_RS17270;Name=LNP58_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17270;old_locus_tag=LNP58_17235 NZ_CP086372.1 Protein Homology CDS 3640156 3643113 . - 0 ID=cds-WP_228329669.1;Parent=gene-LNP58_RS17270;Dbxref=Genbank:WP_228329669.1;Name=WP_228329669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408937.1;locus_tag=LNP58_RS17270;product=histidine kinase;protein_id=WP_228329669.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3643564 3644750 . - . ID=gene-LNP58_RS17275;Name=LNP58_RS17275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17275;old_locus_tag=LNP58_17240;pseudo=true NZ_CP086372.1 Protein Homology CDS 3643564 3644750 . - 0 ID=cds-LNP58_RS17275;Parent=gene-LNP58_RS17275;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS17275;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3645136 3647223 . - . ID=gene-LNP58_RS17280;Name=LNP58_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17280;old_locus_tag=LNP58_17245 NZ_CP086372.1 Protein Homology CDS 3645136 3647223 . - 0 ID=cds-WP_042465046.1;Parent=gene-LNP58_RS17280;Dbxref=Genbank:WP_042465046.1;Name=WP_042465046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368375.1;locus_tag=LNP58_RS17280;product=type III secretion system effector XopAA;protein_id=WP_042465046.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3647886 3648311 . + . ID=gene-LNP58_RS17285;Name=LNP58_RS17285;end_range=3648311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17285;old_locus_tag=LNP58_17250;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3647886 3648311 . + 0 ID=cds-LNP58_RS17285;Parent=gene-LNP58_RS17285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3648311,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019136.2;locus_tag=LNP58_RS17285;partial=true;product=triple tyrosine motif-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3648710 3649288 . - . ID=gene-LNP58_RS17290;Name=LNP58_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17290;old_locus_tag=LNP58_17255 NZ_CP086372.1 Protein Homology CDS 3648710 3649288 . - 0 ID=cds-WP_011259581.1;Parent=gene-LNP58_RS17290;Dbxref=Genbank:WP_011259581.1;Name=WP_011259581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259581.1;locus_tag=LNP58_RS17290;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011259581.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3649413 3650525 . + . ID=gene-LNP58_RS17295;Name=LNP58_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17295;old_locus_tag=LNP58_17260 NZ_CP086372.1 Protein Homology CDS 3649413 3650525 . + 0 ID=cds-WP_011259580.1;Parent=gene-LNP58_RS17295;Dbxref=Genbank:WP_011259580.1;Name=WP_011259580.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347613.1;locus_tag=LNP58_RS17295;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011259580.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3650582 3653134 . + . ID=gene-LNP58_RS17300;Name=LNP58_RS17300;end_range=3653134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17300;old_locus_tag=LNP58_17265;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3650582 3653134 . + 0 ID=cds-LNP58_RS17300;Parent=gene-LNP58_RS17300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0015562,GO:0016020;end_range=3653134,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003112801.1;locus_tag=LNP58_RS17300;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3653253 3654728 . + . ID=gene-LNP58_RS17305;Name=LNP58_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17305;old_locus_tag=LNP58_17270 NZ_CP086372.1 Protein Homology CDS 3653253 3654728 . + 0 ID=cds-WP_069959918.1;Parent=gene-LNP58_RS17305;Dbxref=Genbank:WP_069959918.1;Name=WP_069959918.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS17305;product=IS5-like element ISXoo5 family transposase;protein_id=WP_069959918.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3654745 3655311 . + . ID=gene-LNP58_RS17310;Name=LNP58_RS17310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17310;old_locus_tag=LNP58_17275;partial=true;pseudo=true;start_range=.,3654745 NZ_CP086372.1 Protein Homology CDS 3654745 3655311 . + 0 ID=cds-LNP58_RS17310;Parent=gene-LNP58_RS17310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303959.1;locus_tag=LNP58_RS17310;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,3654745;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3655453 3655587 . - . ID=gene-LNP58_RS17315;Name=LNP58_RS17315;end_range=3655587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17315;old_locus_tag=LNP58_17280;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3655453 3655587 . - 0 ID=cds-LNP58_RS17315;Parent=gene-LNP58_RS17315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3655587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156636.1;locus_tag=LNP58_RS17315;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3655791 3660338 . - . ID=gene-LNP58_RS17320;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS17320;old_locus_tag=LNP58_17285 NZ_CP086372.1 Protein Homology CDS 3655791 3660338 . - 0 ID=cds-WP_228329670.1;Parent=gene-LNP58_RS17320;Dbxref=Genbank:WP_228329670.1;Name=WP_228329670.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408929.1;locus_tag=LNP58_RS17320;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329670.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3660562 3660861 . - . ID=gene-LNP58_RS17325;Name=LNP58_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17325;old_locus_tag=LNP58_17290 NZ_CP086372.1 Protein Homology CDS 3660562 3660861 . - 0 ID=cds-WP_011408408.1-2;Parent=gene-LNP58_RS17325;Dbxref=Genbank:WP_011408408.1;Name=WP_011408408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450394.1;locus_tag=LNP58_RS17325;product=hypothetical protein;protein_id=WP_011408408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3660865 3661059 . - . ID=gene-LNP58_RS17330;Name=LNP58_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17330;old_locus_tag=LNP58_17295 NZ_CP086372.1 GeneMarkS-2+ CDS 3660865 3661059 . - 0 ID=cds-WP_012444931.1;Parent=gene-LNP58_RS17330;Dbxref=Genbank:WP_012444931.1;Name=WP_012444931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17330;product=hypothetical protein;protein_id=WP_012444931.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3661328 3665758 . - . ID=gene-LNP58_RS17335;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS17335;old_locus_tag=LNP58_17300 NZ_CP086372.1 Protein Homology CDS 3661328 3665758 . - 0 ID=cds-WP_228329671.1;Parent=gene-LNP58_RS17335;Dbxref=Genbank:WP_228329671.1;Name=WP_228329671.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408929.1;locus_tag=LNP58_RS17335;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329671.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3665982 3666281 . - . ID=gene-LNP58_RS17340;Name=LNP58_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17340;old_locus_tag=LNP58_17305 NZ_CP086372.1 Protein Homology CDS 3665982 3666281 . - 0 ID=cds-WP_011408408.1-3;Parent=gene-LNP58_RS17340;Dbxref=Genbank:WP_011408408.1;Name=WP_011408408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450394.1;locus_tag=LNP58_RS17340;product=hypothetical protein;protein_id=WP_011408408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3666285 3666479 . - . ID=gene-LNP58_RS17345;Name=LNP58_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17345;old_locus_tag=LNP58_17310 NZ_CP086372.1 GeneMarkS-2+ CDS 3666285 3666479 . - 0 ID=cds-WP_042464821.1;Parent=gene-LNP58_RS17345;Dbxref=Genbank:WP_042464821.1;Name=WP_042464821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17345;product=hypothetical protein;protein_id=WP_042464821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3666748 3670467 . - . ID=gene-LNP58_RS17350;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS17350;old_locus_tag=LNP58_17315 NZ_CP086372.1 Protein Homology CDS 3666748 3670467 . - 0 ID=cds-WP_229001906.1;Parent=gene-LNP58_RS17350;Dbxref=Genbank:WP_229001906.1;Name=WP_229001906.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS17350;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_229001906.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3670676 3671386 . - . ID=gene-LNP58_RS17355;Name=LNP58_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17355;old_locus_tag=LNP58_17320 NZ_CP086372.1 Protein Homology CDS 3670676 3671386 . - 0 ID=cds-WP_173340389.1;Parent=gene-LNP58_RS17355;Dbxref=Genbank:WP_173340389.1;Name=WP_173340389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167280.1;locus_tag=LNP58_RS17355;product=C-type cytochrome biogenesis protein;protein_id=WP_173340389.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3671380 3671877 . - . ID=gene-LNP58_RS17360;Name=LNP58_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17360;old_locus_tag=LNP58_17325 NZ_CP086372.1 Protein Homology CDS 3671380 3671877 . - 0 ID=cds-WP_027703454.1;Parent=gene-LNP58_RS17360;Dbxref=Genbank:WP_027703454.1;Name=WP_027703454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914849.1;locus_tag=LNP58_RS17360;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_027703454.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3671877 3672419 . - . ID=gene-LNP58_RS17365;Name=LNP58_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17365;old_locus_tag=LNP58_17330 NZ_CP086372.1 Protein Homology CDS 3671877 3672419 . - 0 ID=cds-WP_011259571.1;Parent=gene-LNP58_RS17365;Dbxref=Genbank:WP_011259571.1;Name=WP_011259571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503717.1;locus_tag=LNP58_RS17365;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_011259571.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3672416 3674404 . - . ID=gene-LNP58_RS17370;Name=LNP58_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17370;old_locus_tag=LNP58_17335 NZ_CP086372.1 Protein Homology CDS 3672416 3674404 . - 0 ID=cds-WP_011259570.1;Parent=gene-LNP58_RS17370;Dbxref=Genbank:WP_011259570.1;Name=WP_011259570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259570.1;locus_tag=LNP58_RS17370;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_011259570.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3674468 3674938 . - . ID=gene-LNP58_RS17375;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LNP58_RS17375;old_locus_tag=LNP58_17340 NZ_CP086372.1 Protein Homology CDS 3674468 3674938 . - 0 ID=cds-WP_011259569.1;Parent=gene-LNP58_RS17375;Dbxref=Genbank:WP_011259569.1;Name=WP_011259569.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155058.1;locus_tag=LNP58_RS17375;product=cytochrome c maturation protein CcmE;protein_id=WP_011259569.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3674935 3675141 . - . ID=gene-LNP58_RS17380;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=LNP58_RS17380;old_locus_tag=LNP58_17345 NZ_CP086372.1 Protein Homology CDS 3674935 3675141 . - 0 ID=cds-WP_011408923.1;Parent=gene-LNP58_RS17380;Dbxref=Genbank:WP_011408923.1;Name=WP_011408923.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155059.1;locus_tag=LNP58_RS17380;product=heme exporter protein CcmD;protein_id=WP_011408923.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3675138 3675896 . - . ID=gene-LNP58_RS17385;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=LNP58_RS17385;old_locus_tag=LNP58_17350 NZ_CP086372.1 Protein Homology CDS 3675138 3675896 . - 0 ID=cds-WP_069964830.1;Parent=gene-LNP58_RS17385;Dbxref=Genbank:WP_069964830.1;Name=WP_069964830.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302345.1;locus_tag=LNP58_RS17385;product=heme ABC transporter permease CcmC;protein_id=WP_069964830.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3675907 3677232 . - . ID=gene-LNP58_RS17390;Name=LNP58_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17390;old_locus_tag=LNP58_17355 NZ_CP086372.1 Protein Homology CDS 3675907 3677232 . - 0 ID=cds-WP_011259567.1;Parent=gene-LNP58_RS17390;Dbxref=Genbank:WP_011259567.1;Name=WP_011259567.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363686.1;locus_tag=LNP58_RS17390;product=S8 family serine peptidase;protein_id=WP_011259567.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3677229 3677885 . - . ID=gene-LNP58_RS17395;Name=LNP58_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17395;old_locus_tag=LNP58_17360 NZ_CP086372.1 Protein Homology CDS 3677229 3677885 . - 0 ID=cds-WP_044756734.1;Parent=gene-LNP58_RS17395;Dbxref=Genbank:WP_044756734.1;Name=WP_044756734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169443.1;locus_tag=LNP58_RS17395;product=zf-HC2 domain-containing protein;protein_id=WP_044756734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3677882 3678475 . - . ID=gene-LNP58_RS17400;Name=LNP58_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17400;old_locus_tag=LNP58_17365 NZ_CP086372.1 Protein Homology CDS 3677882 3678475 . - 0 ID=cds-WP_178383647.1;Parent=gene-LNP58_RS17400;Dbxref=Genbank:WP_178383647.1;Name=WP_178383647.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848631.1;locus_tag=LNP58_RS17400;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_178383647.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3678527 3679315 . - . ID=gene-LNP58_RS17405;Name=LNP58_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17405;old_locus_tag=LNP58_17370 NZ_CP086372.1 Protein Homology CDS 3678527 3679315 . - 0 ID=cds-WP_033013216.1;Parent=gene-LNP58_RS17405;Dbxref=Genbank:WP_033013216.1;Name=WP_033013216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117552.1;locus_tag=LNP58_RS17405;product=hypothetical protein;protein_id=WP_033013216.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3679758 3680150 . - . ID=gene-LNP58_RS17410;Name=LNP58_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17410;old_locus_tag=LNP58_17375 NZ_CP086372.1 Protein Homology CDS 3679758 3680150 . - 0 ID=cds-WP_011408918.1;Parent=gene-LNP58_RS17410;Dbxref=Genbank:WP_011408918.1;Name=WP_011408918.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347070.1;locus_tag=LNP58_RS17410;product=c-type cytochrome;protein_id=WP_011408918.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3680176 3681516 . - . ID=gene-LNP58_RS17415;Name=LNP58_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17415;old_locus_tag=LNP58_17380 NZ_CP086372.1 Protein Homology CDS 3680176 3681516 . - 0 ID=cds-WP_012444527.1;Parent=gene-LNP58_RS17415;Dbxref=Genbank:WP_012444527.1;Name=WP_012444527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914948.1;locus_tag=LNP58_RS17415;product=hypothetical protein;protein_id=WP_012444527.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3681600 3682220 . - . ID=gene-LNP58_RS17420;Name=LNP58_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17420;old_locus_tag=LNP58_17385 NZ_CP086372.1 Protein Homology CDS 3681600 3682220 . - 0 ID=cds-WP_171970769.1;Parent=gene-LNP58_RS17420;Dbxref=Genbank:WP_171970769.1;Name=WP_171970769.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089947.1;locus_tag=LNP58_RS17420;product=cytochrome b/b6 domain-containing protein;protein_id=WP_171970769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3682525 3682956 . + . ID=gene-LNP58_RS17425;Name=LNP58_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17425;old_locus_tag=LNP58_17390 NZ_CP086372.1 Protein Homology CDS 3682525 3682956 . + 0 ID=cds-WP_011259561.1;Parent=gene-LNP58_RS17425;Dbxref=Genbank:WP_011259561.1;Name=WP_011259561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914950.1;locus_tag=LNP58_RS17425;product=FdtA/QdtA family cupin domain-containing protein;protein_id=WP_011259561.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3682953 3683624 . + . ID=gene-LNP58_RS17430;Name=LNP58_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17430;old_locus_tag=LNP58_17395 NZ_CP086372.1 Protein Homology CDS 3682953 3683624 . + 0 ID=cds-WP_011408914.1;Parent=gene-LNP58_RS17430;Dbxref=Genbank:WP_011408914.1;Name=WP_011408914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966838.1;locus_tag=LNP58_RS17430;product=acetyltransferase;protein_id=WP_011408914.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3683628 3684581 . + . ID=gene-LNP58_RS17435;Name=LNP58_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17435;old_locus_tag=LNP58_17400 NZ_CP086372.1 Protein Homology CDS 3683628 3684581 . + 0 ID=cds-WP_011408913.1;Parent=gene-LNP58_RS17435;Dbxref=Genbank:WP_011408913.1;Name=WP_011408913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155068.1;locus_tag=LNP58_RS17435;product=hypothetical protein;protein_id=WP_011408913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3684568 3685500 . + . ID=gene-LNP58_RS17440;Name=LNP58_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17440;old_locus_tag=LNP58_17405 NZ_CP086372.1 Protein Homology CDS 3684568 3685500 . + 0 ID=cds-WP_011408912.1;Parent=gene-LNP58_RS17440;Dbxref=Genbank:WP_011408912.1;Name=WP_011408912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408912.1;locus_tag=LNP58_RS17440;product=GNAT family N-acetyltransferase;protein_id=WP_011408912.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3685488 3686612 . + . ID=gene-LNP58_RS17445;Name=LNP58_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17445;old_locus_tag=LNP58_17410 NZ_CP086372.1 Protein Homology CDS 3685488 3686612 . + 0 ID=cds-WP_011259557.1;Parent=gene-LNP58_RS17445;Dbxref=Genbank:WP_011259557.1;Name=WP_011259557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452982.1;locus_tag=LNP58_RS17445;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_011259557.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3686609 3687862 . + . ID=gene-LNP58_RS17450;Name=LNP58_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17450;old_locus_tag=LNP58_17415 NZ_CP086372.1 Protein Homology CDS 3686609 3687862 . + 0 ID=cds-WP_011259556.1;Parent=gene-LNP58_RS17450;Dbxref=Genbank:WP_011259556.1;Name=WP_011259556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089953.1;locus_tag=LNP58_RS17450;product=O-antigen translocase;protein_id=WP_011259556.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3687859 3688809 . + . ID=gene-LNP58_RS17455;Name=LNP58_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17455;old_locus_tag=LNP58_17420 NZ_CP086372.1 Protein Homology CDS 3687859 3688809 . + 0 ID=cds-WP_011259555.1;Parent=gene-LNP58_RS17455;Dbxref=Genbank:WP_011259555.1;Name=WP_011259555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089954.1;locus_tag=LNP58_RS17455;product=glycosyltransferase;protein_id=WP_011259555.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3688806 3689939 . + . ID=gene-LNP58_RS17460;Name=LNP58_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17460;old_locus_tag=LNP58_17425 NZ_CP086372.1 Protein Homology CDS 3688806 3689939 . + 0 ID=cds-WP_027703450.1;Parent=gene-LNP58_RS17460;Dbxref=Genbank:WP_027703450.1;Name=WP_027703450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924253.1;locus_tag=LNP58_RS17460;product=hypothetical protein;protein_id=WP_027703450.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3689985 3690836 . + . ID=gene-LNP58_RS17465;Name=LNP58_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17465;old_locus_tag=LNP58_17430 NZ_CP086372.1 Protein Homology CDS 3689985 3690836 . + 0 ID=cds-WP_011259554.1;Parent=gene-LNP58_RS17465;Dbxref=Genbank:WP_011259554.1;Name=WP_011259554.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301333.1;locus_tag=LNP58_RS17465;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_011259554.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3691117 3691959 . + . ID=gene-LNP58_RS17470;Name=LNP58_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17470;old_locus_tag=LNP58_17435 NZ_CP086372.1 Protein Homology CDS 3691117 3691959 . + 0 ID=cds-WP_011259553.1;Parent=gene-LNP58_RS17470;Dbxref=Genbank:WP_011259553.1;Name=WP_011259553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966827.1;locus_tag=LNP58_RS17470;product=class I SAM-dependent methyltransferase;protein_id=WP_011259553.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3691972 3693207 . + . ID=gene-LNP58_RS17475;Name=LNP58_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17475;old_locus_tag=LNP58_17440 NZ_CP086372.1 Protein Homology CDS 3691972 3693207 . + 0 ID=cds-WP_027703449.1;Parent=gene-LNP58_RS17475;Dbxref=Genbank:WP_027703449.1;Name=WP_027703449.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159163.1;locus_tag=LNP58_RS17475;product=amidohydrolase family protein;protein_id=WP_027703449.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3693204 3693902 . + . ID=gene-LNP58_RS17480;Name=LNP58_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17480;old_locus_tag=LNP58_17445 NZ_CP086372.1 Protein Homology CDS 3693204 3693902 . + 0 ID=cds-WP_011408908.1;Parent=gene-LNP58_RS17480;Dbxref=Genbank:WP_011408908.1;Name=WP_011408908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155076.1;locus_tag=LNP58_RS17480;product=class I SAM-dependent methyltransferase;protein_id=WP_011408908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3694024 3695154 . + . ID=gene-LNP58_RS17485;Name=LNP58_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17485;old_locus_tag=LNP58_17450 NZ_CP086372.1 Protein Homology CDS 3694024 3695154 . + 0 ID=cds-WP_041182180.1;Parent=gene-LNP58_RS17485;Dbxref=Genbank:WP_041182180.1;Name=WP_041182180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378292.1;locus_tag=LNP58_RS17485;product=glycosyltransferase family 4 protein;protein_id=WP_041182180.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3695151 3696263 . + . ID=gene-LNP58_RS17490;Name=LNP58_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17490;old_locus_tag=LNP58_17455 NZ_CP086372.1 Protein Homology CDS 3695151 3696263 . + 0 ID=cds-WP_011259549.1;Parent=gene-LNP58_RS17490;Dbxref=Genbank:WP_011259549.1;Name=WP_011259549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259549.1;locus_tag=LNP58_RS17490;product=glycosyltransferase family 4 protein;protein_id=WP_011259549.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3696362 3697318 . - . ID=gene-LNP58_RS17495;Name=LNP58_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17495;old_locus_tag=LNP58_17460 NZ_CP086372.1 Protein Homology CDS 3696362 3697318 . - 0 ID=cds-WP_011407237.1-3;Parent=gene-LNP58_RS17495;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS17495;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3697425 3698639 . - . ID=gene-LNP58_RS17500;Name=LNP58_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17500;old_locus_tag=LNP58_17465 NZ_CP086372.1 Protein Homology CDS 3697425 3698639 . - 0 ID=cds-WP_011259548.1;Parent=gene-LNP58_RS17500;Dbxref=Genbank:WP_011259548.1;Name=WP_011259548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155079.1;locus_tag=LNP58_RS17500;product=nucleotidyltransferase family protein;protein_id=WP_011259548.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3698729 3700249 . - . ID=gene-LNP58_RS17505;Name=LNP58_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17505;old_locus_tag=LNP58_17470 NZ_CP086372.1 Protein Homology CDS 3698729 3700249 . - 0 ID=cds-WP_012444533.1;Parent=gene-LNP58_RS17505;Dbxref=Genbank:WP_012444533.1;Name=WP_012444533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304795.1;locus_tag=LNP58_RS17505;product=radical SAM protein;protein_id=WP_012444533.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3700382 3701440 . + . ID=gene-LNP58_RS17510;Name=LNP58_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17510;old_locus_tag=LNP58_17475 NZ_CP086372.1 Protein Homology CDS 3700382 3701440 . + 0 ID=cds-WP_011408904.1;Parent=gene-LNP58_RS17510;Dbxref=Genbank:WP_011408904.1;Name=WP_011408904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408904.1;locus_tag=LNP58_RS17510;product=hypothetical protein;protein_id=WP_011408904.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3701534 3703255 . + . ID=gene-LNP58_RS17515;Name=LNP58_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17515;old_locus_tag=LNP58_17480 NZ_CP086372.1 Protein Homology CDS 3701534 3703255 . + 0 ID=cds-WP_012444535.1;Parent=gene-LNP58_RS17515;Dbxref=Genbank:WP_012444535.1;Name=WP_012444535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117562.1;locus_tag=LNP58_RS17515;product=ABC transporter ATP-binding protein;protein_id=WP_012444535.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3703370 3703446 . + . ID=gene-LNP58_RS17520;Name=LNP58_RS17520;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS17520;old_locus_tag=LNP58_17485 NZ_CP086372.1 cmsearch ncRNA 3703370 3703446 . + . ID=rna-LNP58_RS17520;Parent=gene-LNP58_RS17520;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17520;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3703370 3703446 . + . ID=exon-LNP58_RS17520-1;Parent=rna-LNP58_RS17520;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17520;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3703563 3704978 . - . ID=gene-LNP58_RS17525;Name=LNP58_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17525;old_locus_tag=LNP58_17490 NZ_CP086372.1 Protein Homology CDS 3703563 3704978 . - 0 ID=cds-WP_011259544.1;Parent=gene-LNP58_RS17525;Dbxref=Genbank:WP_011259544.1;Name=WP_011259544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503687.1;locus_tag=LNP58_RS17525;product=MFS transporter;protein_id=WP_011259544.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3705391 3705467 . - . ID=gene-LNP58_RS17530;Name=LNP58_RS17530;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS17530;old_locus_tag=LNP58_17495 NZ_CP086372.1 cmsearch ncRNA 3705391 3705467 . - . ID=rna-LNP58_RS17530;Parent=gene-LNP58_RS17530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17530;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3705391 3705467 . - . ID=exon-LNP58_RS17530-1;Parent=rna-LNP58_RS17530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17530;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3705783 3706784 . + . ID=gene-LNP58_RS17535;Name=LNP58_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17535;old_locus_tag=LNP58_17500 NZ_CP086372.1 Protein Homology CDS 3705783 3706784 . + 0 ID=cds-WP_011259543.1;Parent=gene-LNP58_RS17535;Dbxref=Genbank:WP_011259543.1;Name=WP_011259543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155084.1;locus_tag=LNP58_RS17535;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011259543.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3706845 3707345 . + . ID=gene-LNP58_RS17540;Name=LNP58_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17540;old_locus_tag=LNP58_17505 NZ_CP086372.1 Protein Homology CDS 3706845 3707345 . + 0 ID=cds-WP_011408903.1;Parent=gene-LNP58_RS17540;Dbxref=Genbank:WP_011408903.1;Name=WP_011408903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966811.1;locus_tag=LNP58_RS17540;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_011408903.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3707377 3708046 . - . ID=gene-LNP58_RS17545;Name=LNP58_RS17545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17545;old_locus_tag=LNP58_17510;pseudo=true NZ_CP086372.1 Protein Homology CDS 3707377 3708046 . - 0 ID=cds-LNP58_RS17545;Parent=gene-LNP58_RS17545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301803.1;locus_tag=LNP58_RS17545;product=exopolysaccharide biosynthesis protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3708030 3709370 . - . ID=gene-LNP58_RS17550;Name=LNP58_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17550;old_locus_tag=LNP58_17515 NZ_CP086372.1 Protein Homology CDS 3708030 3709370 . - 0 ID=cds-WP_011259540.1;Parent=gene-LNP58_RS17550;Dbxref=Genbank:WP_011259540.1;Name=WP_011259540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051102.1;locus_tag=LNP58_RS17550;product=hemolysin family protein;protein_id=WP_011259540.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3709643 3710269 . + . ID=gene-LNP58_RS17555;Name=LNP58_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17555;old_locus_tag=LNP58_17520 NZ_CP086372.1 Protein Homology CDS 3709643 3710269 . + 0 ID=cds-WP_011408901.1;Parent=gene-LNP58_RS17555;Dbxref=Genbank:WP_011408901.1;Name=WP_011408901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992439.1;locus_tag=LNP58_RS17555;product=DUF47 family protein;protein_id=WP_011408901.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3710279 3711406 . + . ID=gene-LNP58_RS17560;Name=LNP58_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17560;old_locus_tag=LNP58_17525 NZ_CP086372.1 Protein Homology CDS 3710279 3711406 . + 0 ID=cds-WP_011259538.1;Parent=gene-LNP58_RS17560;Dbxref=Genbank:WP_011259538.1;Name=WP_011259538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914989.1;locus_tag=LNP58_RS17560;product=inorganic phosphate transporter;protein_id=WP_011259538.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3711483 3712244 . + . ID=gene-LNP58_RS17565;Name=LNP58_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17565;old_locus_tag=LNP58_17530 NZ_CP086372.1 Protein Homology CDS 3711483 3712244 . + 0 ID=cds-WP_011408900.1;Parent=gene-LNP58_RS17565;Dbxref=Genbank:WP_011408900.1;Name=WP_011408900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155090.1;locus_tag=LNP58_RS17565;product=YdcF family protein;protein_id=WP_011408900.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3712302 3713810 . - . ID=gene-LNP58_RS17570;Name=LNP58_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17570;old_locus_tag=LNP58_17535 NZ_CP086372.1 Protein Homology CDS 3712302 3713810 . - 0 ID=cds-WP_075242259.1;Parent=gene-LNP58_RS17570;Dbxref=Genbank:WP_075242259.1;Name=WP_075242259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166236.1;locus_tag=LNP58_RS17570;product=S10 family peptidase;protein_id=WP_075242259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3714226 3715024 . + . ID=gene-LNP58_RS17575;Name=LNP58_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17575;old_locus_tag=LNP58_17540 NZ_CP086372.1 Protein Homology CDS 3714226 3714497 . + 0 ID=cds-WP_094187731.1-3;Parent=gene-LNP58_RS17575;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17575;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3714496 3715024 . + 1 ID=cds-WP_094187731.1-3;Parent=gene-LNP58_RS17575;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS17575;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3715043 3716932 . - . ID=gene-LNP58_RS17580;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LNP58_RS17580;old_locus_tag=LNP58_17545 NZ_CP086372.1 Protein Homology CDS 3715043 3716932 . - 0 ID=cds-WP_011408898.1;Parent=gene-LNP58_RS17580;Dbxref=Genbank:WP_011408898.1;Name=WP_011408898.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=LNP58_RS17580;product=DNA topoisomerase IV subunit B;protein_id=WP_011408898.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3717097 3717339 . + . ID=gene-LNP58_RS17585;Name=LNP58_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17585;old_locus_tag=LNP58_17550 NZ_CP086372.1 Protein Homology CDS 3717097 3717339 . + 0 ID=cds-WP_011259533.1;Parent=gene-LNP58_RS17585;Dbxref=Genbank:WP_011259533.1;Name=WP_011259533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481819.1;locus_tag=LNP58_RS17585;product=hypothetical protein;protein_id=WP_011259533.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3717514 3719178 . + . ID=gene-LNP58_RS17590;Name=LNP58_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17590;old_locus_tag=LNP58_17555 NZ_CP086372.1 Protein Homology CDS 3717514 3719178 . + 0 ID=cds-WP_011259532.1;Parent=gene-LNP58_RS17590;Dbxref=Genbank:WP_011259532.1;Name=WP_011259532.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481821.1;locus_tag=LNP58_RS17590;product=CTP synthase;protein_id=WP_011259532.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3719382 3720212 . + . ID=gene-LNP58_RS17595;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LNP58_RS17595;old_locus_tag=LNP58_17560 NZ_CP086372.1 Protein Homology CDS 3719382 3720212 . + 0 ID=cds-WP_011259531.1;Parent=gene-LNP58_RS17595;Dbxref=Genbank:WP_011259531.1;Name=WP_011259531.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992423.1;locus_tag=LNP58_RS17595;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_011259531.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3720309 3720551 . + . ID=gene-LNP58_RS17600;Name=LNP58_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17600;old_locus_tag=LNP58_17565 NZ_CP086372.1 Protein Homology CDS 3720309 3720551 . + 0 ID=cds-WP_027703575.1;Parent=gene-LNP58_RS17600;Dbxref=Genbank:WP_027703575.1;Name=WP_027703575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169875.1;locus_tag=LNP58_RS17600;product=hypothetical protein;protein_id=WP_027703575.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3720676 3721968 . + . ID=gene-LNP58_RS17605;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LNP58_RS17605;old_locus_tag=LNP58_17570 NZ_CP086372.1 Protein Homology CDS 3720676 3721968 . + 0 ID=cds-WP_011408895.1;Parent=gene-LNP58_RS17605;Dbxref=Genbank:WP_011408895.1;Name=WP_011408895.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808113.1;locus_tag=LNP58_RS17605;product=phosphopyruvate hydratase;protein_id=WP_011408895.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3721972 3722337 . + . ID=gene-LNP58_RS17610;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LNP58_RS17610;old_locus_tag=LNP58_17575 NZ_CP086372.1 Protein Homology CDS 3721972 3722337 . + 0 ID=cds-WP_011259528.1;Parent=gene-LNP58_RS17610;Dbxref=Genbank:WP_011259528.1;Name=WP_011259528.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259528.1;locus_tag=LNP58_RS17610;product=cell division protein FtsB;protein_id=WP_011259528.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3722334 3723152 . + . ID=gene-LNP58_RS17615;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LNP58_RS17615;old_locus_tag=LNP58_17580 NZ_CP086372.1 Protein Homology CDS 3722334 3723152 . + 0 ID=cds-WP_011408894.1;Parent=gene-LNP58_RS17615;Dbxref=Genbank:WP_011408894.1;Name=WP_011408894.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503668.1;locus_tag=LNP58_RS17615;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_011408894.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3723212 3723285 . + . ID=gene-LNP58_RS17620;Name=LNP58_RS17620;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS17620;old_locus_tag=LNP58_17585 NZ_CP086372.1 cmsearch ncRNA 3723212 3723285 . + . ID=rna-LNP58_RS17620;Parent=gene-LNP58_RS17620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17620;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3723212 3723285 . + . ID=exon-LNP58_RS17620-1;Parent=rna-LNP58_RS17620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS17620;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3723308 3723799 . + . ID=gene-LNP58_RS17625;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LNP58_RS17625;old_locus_tag=LNP58_17590 NZ_CP086372.1 Protein Homology CDS 3723308 3723799 . + 0 ID=cds-WP_011259526.1;Parent=gene-LNP58_RS17625;Dbxref=Genbank:WP_011259526.1;Name=WP_011259526.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453316.1;locus_tag=LNP58_RS17625;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_011259526.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3723920 3725029 . + . ID=gene-LNP58_RS17630;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=LNP58_RS17630;old_locus_tag=LNP58_17595 NZ_CP086372.1 Protein Homology CDS 3723920 3725029 . + 0 ID=cds-WP_011259525.1;Parent=gene-LNP58_RS17630;Dbxref=Genbank:WP_011259525.1;Name=WP_011259525.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503666.1;locus_tag=LNP58_RS17630;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_011259525.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3725451 3725990 . - . ID=gene-LNP58_RS17635;Name=LNP58_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17635;old_locus_tag=LNP58_17600 NZ_CP086372.1 Protein Homology CDS 3725451 3725990 . - 0 ID=cds-WP_011408893.1;Parent=gene-LNP58_RS17635;Dbxref=Genbank:WP_011408893.1;Name=WP_011408893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237727.1;locus_tag=LNP58_RS17635;product=Smr/MutS family protein;protein_id=WP_011408893.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3726090 3726869 . + . ID=gene-LNP58_RS17640;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LNP58_RS17640;old_locus_tag=LNP58_17605 NZ_CP086372.1 Protein Homology CDS 3726090 3726869 . + 0 ID=cds-WP_011408892.1;Parent=gene-LNP58_RS17640;Dbxref=Genbank:WP_011408892.1;Name=WP_011408892.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305385.1;locus_tag=LNP58_RS17640;product=5'/3'-nucleotidase SurE;protein_id=WP_011408892.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3726866 3727543 . + . ID=gene-LNP58_RS17645;Name=LNP58_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17645;old_locus_tag=LNP58_17610 NZ_CP086372.1 Protein Homology CDS 3726866 3727543 . + 0 ID=cds-WP_011259522.1;Parent=gene-LNP58_RS17645;Dbxref=Genbank:WP_011259522.1;Name=WP_011259522.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503664.1;locus_tag=LNP58_RS17645;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_011259522.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3727562 3728176 . + . ID=gene-LNP58_RS17650;Name=LNP58_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17650;old_locus_tag=LNP58_17615 NZ_CP086372.1 Protein Homology CDS 3727562 3728176 . + 0 ID=cds-WP_011259521.1;Parent=gene-LNP58_RS17650;Dbxref=Genbank:WP_011259521.1;Name=WP_011259521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481846.1;locus_tag=LNP58_RS17650;product=DedA family protein;protein_id=WP_011259521.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3728173 3728946 . + . ID=gene-LNP58_RS17655;Name=LNP58_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17655;old_locus_tag=LNP58_17620 NZ_CP086372.1 Protein Homology CDS 3728173 3728946 . + 0 ID=cds-WP_011408891.1;Parent=gene-LNP58_RS17655;Dbxref=Genbank:WP_011408891.1;Name=WP_011408891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481848.1;locus_tag=LNP58_RS17655;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_011408891.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3729139 3729513 . - . ID=gene-LNP58_RS17660;Name=LNP58_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17660;old_locus_tag=LNP58_17625 NZ_CP086372.1 Protein Homology CDS 3729139 3729513 . - 0 ID=cds-WP_011259519.1;Parent=gene-LNP58_RS17660;Dbxref=Genbank:WP_011259519.1;Name=WP_011259519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365690.1;locus_tag=LNP58_RS17660;product=Mth938-like domain-containing protein;protein_id=WP_011259519.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3729529 3729834 . - . ID=gene-LNP58_RS17665;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LNP58_RS17665;old_locus_tag=LNP58_17630 NZ_CP086372.1 Protein Homology CDS 3729529 3729834 . - 0 ID=cds-WP_011259518.1;Parent=gene-LNP58_RS17665;Dbxref=Genbank:WP_011259518.1;Name=WP_011259518.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300317.1;locus_tag=LNP58_RS17665;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_011259518.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3729900 3730532 . + . ID=gene-LNP58_RS17670;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LNP58_RS17670;old_locus_tag=LNP58_17635 NZ_CP086372.1 Protein Homology CDS 3729900 3730532 . + 0 ID=cds-WP_011408890.1;Parent=gene-LNP58_RS17670;Dbxref=Genbank:WP_011408890.1;Name=WP_011408890.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924322.1;locus_tag=LNP58_RS17670;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_011408890.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3730594 3732534 . + . ID=gene-LNP58_RS17675;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LNP58_RS17675;old_locus_tag=LNP58_17640 NZ_CP086372.1 Protein Homology CDS 3730594 3732534 . + 0 ID=cds-WP_012444551.1;Parent=gene-LNP58_RS17675;Dbxref=Genbank:WP_012444551.1;Name=WP_012444551.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481854.1;locus_tag=LNP58_RS17675;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_012444551.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3732654 3733556 . + . ID=gene-LNP58_RS17680;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LNP58_RS17680;old_locus_tag=LNP58_17645 NZ_CP086372.1 Protein Homology CDS 3732654 3733556 . + 0 ID=cds-WP_027703574.1;Parent=gene-LNP58_RS17680;Dbxref=Genbank:WP_027703574.1;Name=WP_027703574.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453304.1;locus_tag=LNP58_RS17680;product=dihydropteroate synthase;protein_id=WP_027703574.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3733556 3734539 . + . ID=gene-LNP58_RS17685;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LNP58_RS17685;old_locus_tag=LNP58_17650 NZ_CP086372.1 Protein Homology CDS 3733556 3734539 . + 0 ID=cds-WP_011408887.1;Parent=gene-LNP58_RS17685;Dbxref=Genbank:WP_011408887.1;Name=WP_011408887.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155109.1;locus_tag=LNP58_RS17685;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_011408887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3734617 3734895 . + . ID=gene-LNP58_RS17690;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LNP58_RS17690;old_locus_tag=LNP58_17655 NZ_CP086372.1 Protein Homology CDS 3734617 3734895 . + 0 ID=cds-WP_005915027.1;Parent=gene-LNP58_RS17690;Dbxref=Genbank:WP_005915027.1;Name=WP_005915027.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801494.1;locus_tag=LNP58_RS17690;product=RNA chaperone Hfq;protein_id=WP_005915027.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3734907 3736226 . + . ID=gene-LNP58_RS17695;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LNP58_RS17695;old_locus_tag=LNP58_17660 NZ_CP086372.1 Protein Homology CDS 3734907 3736226 . + 0 ID=cds-WP_011259513.1;Parent=gene-LNP58_RS17695;Dbxref=Genbank:WP_011259513.1;Name=WP_011259513.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503654.1;locus_tag=LNP58_RS17695;product=GTPase HflX;protein_id=WP_011259513.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3736658 3737152 . + . ID=gene-LNP58_RS17700;Name=LNP58_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17700;old_locus_tag=LNP58_17665 NZ_CP086372.1 Protein Homology CDS 3736658 3737152 . + 0 ID=cds-WP_011259512.1;Parent=gene-LNP58_RS17700;Dbxref=Genbank:WP_011259512.1;Name=WP_011259512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481865.1;locus_tag=LNP58_RS17700;product=CinA family protein;protein_id=WP_011259512.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3737630 3739306 . + . ID=gene-LNP58_RS17705;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LNP58_RS17705;old_locus_tag=LNP58_17670 NZ_CP086372.1 Protein Homology CDS 3737630 3739306 . + 0 ID=cds-WP_011408886.1;Parent=gene-LNP58_RS17705;Dbxref=Genbank:WP_011408886.1;Name=WP_011408886.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155111.1;locus_tag=LNP58_RS17705;product=2-polyprenylphenol 6-hydroxylase;protein_id=WP_011408886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3739395 3740036 . + . ID=gene-LNP58_RS17710;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LNP58_RS17710;old_locus_tag=LNP58_17675 NZ_CP086372.1 Protein Homology CDS 3739395 3740036 . + 0 ID=cds-WP_011408885.1;Parent=gene-LNP58_RS17710;Dbxref=Genbank:WP_011408885.1;Name=WP_011408885.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269877.1;locus_tag=LNP58_RS17710;product=transcriptional repressor LexA;protein_id=WP_011408885.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3740209 3741243 . + . ID=gene-LNP58_RS17715;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LNP58_RS17715;old_locus_tag=LNP58_17680 NZ_CP086372.1 Protein Homology CDS 3740209 3741243 . + 0 ID=cds-WP_011408884.1;Parent=gene-LNP58_RS17715;Dbxref=Genbank:WP_011408884.1;Name=WP_011408884.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051113.1;locus_tag=LNP58_RS17715;product=recombinase RecA;protein_id=WP_011408884.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3741546 3742034 . + . ID=gene-LNP58_RS17720;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LNP58_RS17720;old_locus_tag=LNP58_17685 NZ_CP086372.1 Protein Homology CDS 3741546 3742034 . + 0 ID=cds-WP_012444556.1;Parent=gene-LNP58_RS17720;Dbxref=Genbank:WP_012444556.1;Name=WP_012444556.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966764.1;locus_tag=LNP58_RS17720;product=recombination regulator RecX;protein_id=WP_012444556.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3742136 3744784 . + . ID=gene-LNP58_RS17725;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LNP58_RS17725;old_locus_tag=LNP58_17690 NZ_CP086372.1 Protein Homology CDS 3742136 3744784 . + 0 ID=cds-WP_011259507.1;Parent=gene-LNP58_RS17725;Dbxref=Genbank:WP_011259507.1;Name=WP_011259507.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347112.1;locus_tag=LNP58_RS17725;product=alanine--tRNA ligase;protein_id=WP_011259507.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3744924 3745136 . + . ID=gene-LNP58_RS17730;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LNP58_RS17730;old_locus_tag=LNP58_17695 NZ_CP086372.1 Protein Homology CDS 3744924 3745136 . + 0 ID=cds-WP_003481884.1;Parent=gene-LNP58_RS17730;Dbxref=Genbank:WP_003481884.1;Name=WP_003481884.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481884.1;locus_tag=LNP58_RS17730;product=carbon storage regulator CsrA;protein_id=WP_003481884.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3745224 3745316 . + . ID=gene-LNP58_RS17735;Name=LNP58_RS17735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS17735;old_locus_tag=LNP58_17700 NZ_CP086372.1 tRNAscan-SE tRNA 3745224 3745316 . + . ID=rna-LNP58_RS17735;Parent=gene-LNP58_RS17735;anticodon=(pos:3745258..3745260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17735;product=tRNA-Ser NZ_CP086372.1 tRNAscan-SE exon 3745224 3745316 . + . ID=exon-LNP58_RS17735-1;Parent=rna-LNP58_RS17735;anticodon=(pos:3745258..3745260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17735;product=tRNA-Ser NZ_CP086372.1 RefSeq gene 3745847 3746266 . + . ID=gene-LNP58_RS17740;Name=LNP58_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17740;old_locus_tag=LNP58_17705 NZ_CP086372.1 Protein Homology CDS 3745847 3746266 . + 0 ID=cds-WP_011408882.1;Parent=gene-LNP58_RS17740;Dbxref=Genbank:WP_011408882.1;Name=WP_011408882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444558.1;locus_tag=LNP58_RS17740;product=helix-turn-helix domain-containing protein;protein_id=WP_011408882.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3746765 3746953 . + . ID=gene-LNP58_RS17745;Name=LNP58_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17745;old_locus_tag=LNP58_17710 NZ_CP086372.1 GeneMarkS-2+ CDS 3746765 3746953 . + 0 ID=cds-WP_228383547.1;Parent=gene-LNP58_RS17745;Dbxref=Genbank:WP_228383547.1;Name=WP_228383547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17745;product=hypothetical protein;protein_id=WP_228383547.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3747139 3747834 . + . ID=gene-LNP58_RS17750;Name=LNP58_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17750;old_locus_tag=LNP58_17715 NZ_CP086372.1 Protein Homology CDS 3747139 3747834 . + 0 ID=cds-WP_011408881.1;Parent=gene-LNP58_RS17750;Dbxref=Genbank:WP_011408881.1;Name=WP_011408881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408881.1;locus_tag=LNP58_RS17750;product=hypothetical protein;protein_id=WP_011408881.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3747839 3748588 . + . ID=gene-LNP58_RS17755;Name=LNP58_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17755;old_locus_tag=LNP58_17720 NZ_CP086372.1 Protein Homology CDS 3747839 3748588 . + 0 ID=cds-WP_011259505.1;Parent=gene-LNP58_RS17755;Dbxref=Genbank:WP_011259505.1;Name=WP_011259505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259505.1;locus_tag=LNP58_RS17755;product=isopentenyl transferase;protein_id=WP_011259505.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3748832 3749299 . + . ID=gene-LNP58_RS17760;Name=LNP58_RS17760;end_range=3749299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17760;old_locus_tag=LNP58_17725;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3748832 3749299 . + 0 ID=cds-LNP58_RS17760;Parent=gene-LNP58_RS17760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3749299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850903.1;locus_tag=LNP58_RS17760;partial=true;product=glycoside hydrolase family 104 protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3749401 3749586 . + . ID=gene-LNP58_RS17765;Name=LNP58_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17765;old_locus_tag=LNP58_17730 NZ_CP086372.1 GeneMarkS-2+ CDS 3749401 3749586 . + 0 ID=cds-WP_012444564.1;Parent=gene-LNP58_RS17765;Dbxref=Genbank:WP_012444564.1;Name=WP_012444564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS17765;product=hypothetical protein;protein_id=WP_012444564.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3749732 3750433 . - . ID=gene-LNP58_RS17770;Name=LNP58_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17770;old_locus_tag=LNP58_17735 NZ_CP086372.1 Protein Homology CDS 3749732 3750433 . - 0 ID=cds-WP_011259502.1;Parent=gene-LNP58_RS17770;Dbxref=Genbank:WP_011259502.1;Name=WP_011259502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966758.1;locus_tag=LNP58_RS17770;product=pirin family protein;protein_id=WP_011259502.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3750570 3751514 . + . ID=gene-LNP58_RS17775;Name=LNP58_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17775;old_locus_tag=LNP58_17740 NZ_CP086372.1 Protein Homology CDS 3750570 3751514 . + 0 ID=cds-WP_011259501.1;Parent=gene-LNP58_RS17775;Dbxref=Genbank:WP_011259501.1;Name=WP_011259501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503104.1;locus_tag=LNP58_RS17775;product=LysR substrate-binding domain-containing protein;protein_id=WP_011259501.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3751559 3752545 . + . ID=gene-LNP58_RS17780;Name=LNP58_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17780;old_locus_tag=LNP58_17745 NZ_CP086372.1 Protein Homology CDS 3751559 3752545 . + 0 ID=cds-WP_011259500.1;Parent=gene-LNP58_RS17780;Dbxref=Genbank:WP_011259500.1;Name=WP_011259500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155120.1;locus_tag=LNP58_RS17780;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_011259500.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3752713 3752789 . - . ID=gene-LNP58_RS17785;Name=LNP58_RS17785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS17785;old_locus_tag=LNP58_17750 NZ_CP086372.1 tRNAscan-SE tRNA 3752713 3752789 . - . ID=rna-LNP58_RS17785;Parent=gene-LNP58_RS17785;anticodon=(pos:complement(3752753..3752755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17785;product=tRNA-Arg NZ_CP086372.1 tRNAscan-SE exon 3752713 3752789 . - . ID=exon-LNP58_RS17785-1;Parent=rna-LNP58_RS17785;anticodon=(pos:complement(3752753..3752755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17785;product=tRNA-Arg NZ_CP086372.1 RefSeq gene 3752883 3752959 . - . ID=gene-LNP58_RS17790;Name=LNP58_RS17790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS17790;old_locus_tag=LNP58_17755 NZ_CP086372.1 tRNAscan-SE tRNA 3752883 3752959 . - . ID=rna-LNP58_RS17790;Parent=gene-LNP58_RS17790;anticodon=(pos:complement(3752923..3752925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17790;product=tRNA-Arg NZ_CP086372.1 tRNAscan-SE exon 3752883 3752959 . - . ID=exon-LNP58_RS17790-1;Parent=rna-LNP58_RS17790;anticodon=(pos:complement(3752923..3752925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS17790;product=tRNA-Arg NZ_CP086372.1 RefSeq pseudogene 3753000 3753863 . - . ID=gene-LNP58_RS17795;Name=LNP58_RS17795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17795;old_locus_tag=LNP58_17760;pseudo=true NZ_CP086372.1 Protein Homology CDS 3753000 3753863 . - 0 ID=cds-LNP58_RS17795;Parent=gene-LNP58_RS17795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966754.1;locus_tag=LNP58_RS17795;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3753860 3754669 . - . ID=gene-LNP58_RS17800;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LNP58_RS17800;old_locus_tag=LNP58_17765 NZ_CP086372.1 Protein Homology CDS 3753860 3754669 . - 0 ID=cds-WP_012444567.1;Parent=gene-LNP58_RS17800;Dbxref=Genbank:WP_012444567.1;Name=WP_012444567.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481896.1;locus_tag=LNP58_RS17800;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_012444567.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3754754 3755236 . - . ID=gene-LNP58_RS17805;Name=LNP58_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17805;old_locus_tag=LNP58_17770 NZ_CP086372.1 Protein Homology CDS 3754754 3755236 . - 0 ID=cds-WP_011408879.1;Parent=gene-LNP58_RS17805;Dbxref=Genbank:WP_011408879.1;Name=WP_011408879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503108.1;locus_tag=LNP58_RS17805;product=hypothetical protein;protein_id=WP_011408879.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3755236 3756633 . - . ID=gene-LNP58_RS17810;Name=LNP58_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17810;old_locus_tag=LNP58_17775 NZ_CP086372.1 Protein Homology CDS 3755236 3756633 . - 0 ID=cds-WP_011259496.1;Parent=gene-LNP58_RS17810;Dbxref=Genbank:WP_011259496.1;Name=WP_011259496.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365742.1;locus_tag=LNP58_RS17810;product=PhoH family protein;protein_id=WP_011259496.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3756716 3757198 . - . ID=gene-LNP58_RS17815;Name=LNP58_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17815;old_locus_tag=LNP58_17780 NZ_CP086372.1 Protein Homology CDS 3756716 3757198 . - 0 ID=cds-WP_011259495.1;Parent=gene-LNP58_RS17815;Dbxref=Genbank:WP_011259495.1;Name=WP_011259495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481906.1;locus_tag=LNP58_RS17815;product=peroxiredoxin;protein_id=WP_011259495.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3757236 3757586 . - . ID=gene-LNP58_RS17820;Name=LNP58_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17820;old_locus_tag=LNP58_17785 NZ_CP086372.1 Protein Homology CDS 3757236 3757586 . - 0 ID=cds-WP_011259494.1;Parent=gene-LNP58_RS17820;Dbxref=Genbank:WP_011259494.1;Name=WP_011259494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300297.1;locus_tag=LNP58_RS17820;product=ribonuclease E inhibitor RraB;protein_id=WP_011259494.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3757598 3758224 . - . ID=gene-LNP58_RS17825;Name=LNP58_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17825;old_locus_tag=LNP58_17790 NZ_CP086372.1 Protein Homology CDS 3757598 3758224 . - 0 ID=cds-WP_011259493.1;Parent=gene-LNP58_RS17825;Dbxref=Genbank:WP_011259493.1;Name=WP_011259493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503111.1;locus_tag=LNP58_RS17825;product=glycine cleavage system protein R;protein_id=WP_011259493.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3758318 3759226 . + . ID=gene-LNP58_RS17830;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LNP58_RS17830;old_locus_tag=LNP58_17795 NZ_CP086372.1 Protein Homology CDS 3758318 3759226 . + 0 ID=cds-WP_011259492.1;Parent=gene-LNP58_RS17830;Dbxref=Genbank:WP_011259492.1;Name=WP_011259492.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813784.1;locus_tag=LNP58_RS17830;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011259492.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3759243 3759761 . + . ID=gene-LNP58_RS17835;Name=LNP58_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17835;old_locus_tag=LNP58_17800 NZ_CP086372.1 Protein Homology CDS 3759243 3759761 . + 0 ID=cds-WP_011408878.1;Parent=gene-LNP58_RS17835;Dbxref=Genbank:WP_011408878.1;Name=WP_011408878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994930.1;locus_tag=LNP58_RS17835;product=hypothetical protein;protein_id=WP_011408878.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3759886 3760209 . - . ID=gene-LNP58_RS17840;Name=LNP58_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17840;old_locus_tag=LNP58_17805 NZ_CP086372.1 Protein Homology CDS 3759886 3760209 . - 0 ID=cds-WP_011259490.1;Parent=gene-LNP58_RS17840;Dbxref=Genbank:WP_011259490.1;Name=WP_011259490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=LNP58_RS17840;product=ferredoxin family protein;protein_id=WP_011259490.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3760292 3761170 . - . ID=gene-LNP58_RS17845;Name=LNP58_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17845;old_locus_tag=LNP58_17810 NZ_CP086372.1 Protein Homology CDS 3760292 3761170 . - 0 ID=cds-WP_011408877.1;Parent=gene-LNP58_RS17845;Dbxref=Genbank:WP_011408877.1;Name=WP_011408877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167121.1;locus_tag=LNP58_RS17845;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_011408877.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3761167 3762078 . - . ID=gene-LNP58_RS17850;Name=LNP58_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17850;old_locus_tag=LNP58_17815 NZ_CP086372.1 Protein Homology CDS 3761167 3762078 . - 0 ID=cds-WP_011408876.1;Parent=gene-LNP58_RS17850;Dbxref=Genbank:WP_011408876.1;Name=WP_011408876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155129.1;locus_tag=LNP58_RS17850;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_011408876.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3762072 3763220 . - . ID=gene-LNP58_RS17855;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LNP58_RS17855;old_locus_tag=LNP58_17820 NZ_CP086372.1 Protein Homology CDS 3762072 3763220 . - 0 ID=cds-WP_011408875.1;Parent=gene-LNP58_RS17855;Dbxref=Genbank:WP_011408875.1;Name=WP_011408875.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=LNP58_RS17855;product=galactonate dehydratase;protein_id=WP_011408875.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3763217 3763849 . - . ID=gene-LNP58_RS17860;Name=LNP58_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17860;old_locus_tag=LNP58_17825 NZ_CP086372.1 Protein Homology CDS 3763217 3763849 . - 0 ID=cds-WP_011259487.1;Parent=gene-LNP58_RS17860;Dbxref=Genbank:WP_011259487.1;Name=WP_011259487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452718.1;locus_tag=LNP58_RS17860;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_011259487.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3764262 3765233 . + . ID=gene-LNP58_RS17865;Name=LNP58_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17865;old_locus_tag=LNP58_17830 NZ_CP086372.1 Protein Homology CDS 3764262 3765233 . + 0 ID=cds-WP_011408874.1;Parent=gene-LNP58_RS17865;Dbxref=Genbank:WP_011408874.1;Name=WP_011408874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365771.1;locus_tag=LNP58_RS17865;product=LysR family transcriptional regulator;protein_id=WP_011408874.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3765431 3765781 . - . ID=gene-LNP58_RS17870;Name=LNP58_RS17870;end_range=3765781,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17870;old_locus_tag=LNP58_17835;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3765431 3765781 . - 0 ID=cds-LNP58_RS17870;Parent=gene-LNP58_RS17870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3765781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156675.1;locus_tag=LNP58_RS17870;partial=true;product=relaxation protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3766035 3768938 . + . ID=gene-LNP58_RS17875;Name=LNP58_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17875;old_locus_tag=LNP58_17840 NZ_CP086372.1 Protein Homology CDS 3766035 3768938 . + 0 ID=cds-WP_011259484.1;Parent=gene-LNP58_RS17875;Dbxref=Genbank:WP_011259484.1;Name=WP_011259484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114815.1;locus_tag=LNP58_RS17875;product=DUF5110 domain-containing protein;protein_id=WP_011259484.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3769030 3770159 . + . ID=gene-LNP58_RS17880;Name=LNP58_RS17880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17880;old_locus_tag=LNP58_17845;pseudo=true NZ_CP086372.1 Protein Homology CDS 3769030 3770159 . + 0 ID=cds-LNP58_RS17880;Parent=gene-LNP58_RS17880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924393.1;locus_tag=LNP58_RS17880;product=glycoside hydrolase family 95 protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3770156 3771649 . + . ID=gene-LNP58_RS17885;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LNP58_RS17885;old_locus_tag=LNP58_17850 NZ_CP086372.1 Protein Homology CDS 3770156 3771649 . + 0 ID=cds-WP_011408872.1;Parent=gene-LNP58_RS17885;Dbxref=Genbank:WP_011408872.1;Name=WP_011408872.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343898.1;locus_tag=LNP58_RS17885;product=xylulokinase;protein_id=WP_011408872.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3771697 3773034 . + . ID=gene-LNP58_RS17890;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LNP58_RS17890;old_locus_tag=LNP58_17855 NZ_CP086372.1 Protein Homology CDS 3771697 3773034 . + 0 ID=cds-WP_011259480.1-2;Parent=gene-LNP58_RS17890;Dbxref=Genbank:WP_011259480.1;Name=WP_011259480.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=LNP58_RS17890;product=xylose isomerase;protein_id=WP_011259480.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3773119 3774546 . + . ID=gene-LNP58_RS17895;Name=LNP58_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17895;old_locus_tag=LNP58_17860 NZ_CP086372.1 Protein Homology CDS 3773119 3774546 . + 0 ID=cds-WP_011408871.1;Parent=gene-LNP58_RS17895;Dbxref=Genbank:WP_011408871.1;Name=WP_011408871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371361.1;locus_tag=LNP58_RS17895;product=sugar porter family MFS transporter;protein_id=WP_011408871.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3774494 3775454 . - . ID=gene-LNP58_RS17900;Name=LNP58_RS17900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17900;old_locus_tag=LNP58_17865;pseudo=true NZ_CP086372.1 Protein Homology CDS 3774494 3775454 . - 0 ID=cds-LNP58_RS17900;Parent=gene-LNP58_RS17900;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444577.1;locus_tag=LNP58_RS17900;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3775556 3775900 . + . ID=gene-LNP58_RS17905;Name=LNP58_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17905;old_locus_tag=LNP58_17870 NZ_CP086372.1 Protein Homology CDS 3775556 3775900 . + 0 ID=cds-WP_011408868.1;Parent=gene-LNP58_RS17905;Dbxref=Genbank:WP_011408868.1;Name=WP_011408868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444578.1;locus_tag=LNP58_RS17905;product=hypothetical protein;protein_id=WP_011408868.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3776329 3776715 . - . ID=gene-LNP58_RS17910;Name=LNP58_RS17910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17910;old_locus_tag=LNP58_17875;pseudo=true NZ_CP086372.1 Protein Homology CDS 3776329 3776715 . - 0 ID=cds-LNP58_RS17910;Parent=gene-LNP58_RS17910;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155301.1;locus_tag=LNP58_RS17910;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3776715 3777281 . - . ID=gene-LNP58_RS17915;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LNP58_RS17915;old_locus_tag=LNP58_17880 NZ_CP086372.1 Protein Homology CDS 3776715 3777281 . - 0 ID=cds-WP_011259476.1;Parent=gene-LNP58_RS17915;Dbxref=Genbank:WP_011259476.1;Name=WP_011259476.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=LNP58_RS17915;product=elongation factor P-like protein YeiP;protein_id=WP_011259476.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3777403 3778173 . - . ID=gene-LNP58_RS17920;Name=LNP58_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17920;old_locus_tag=LNP58_17885 NZ_CP086372.1 Protein Homology CDS 3777403 3778173 . - 0 ID=cds-WP_011259475.1;Parent=gene-LNP58_RS17920;Dbxref=Genbank:WP_011259475.1;Name=WP_011259475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486257.1;locus_tag=LNP58_RS17920;product=SDR family oxidoreductase;protein_id=WP_011259475.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3778312 3779208 . - . ID=gene-LNP58_RS17925;Name=LNP58_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17925;old_locus_tag=LNP58_17890 NZ_CP086372.1 Protein Homology CDS 3778312 3779208 . - 0 ID=cds-WP_011408867.1;Parent=gene-LNP58_RS17925;Dbxref=Genbank:WP_011408867.1;Name=WP_011408867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503194.1;locus_tag=LNP58_RS17925;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_011408867.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3779279 3779668 . - . ID=gene-LNP58_RS17930;Name=LNP58_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17930;old_locus_tag=LNP58_17895 NZ_CP086372.1 Protein Homology CDS 3779279 3779668 . - 0 ID=cds-WP_011259473.1;Parent=gene-LNP58_RS17930;Dbxref=Genbank:WP_011259473.1;Name=WP_011259473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367129.1;locus_tag=LNP58_RS17930;product=VOC family protein;protein_id=WP_011259473.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3779665 3780462 . - . ID=gene-LNP58_RS17935;Name=LNP58_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17935;old_locus_tag=LNP58_17900 NZ_CP086372.1 Protein Homology CDS 3779665 3780462 . - 0 ID=cds-WP_011259472.1;Parent=gene-LNP58_RS17935;Dbxref=Genbank:WP_011259472.1;Name=WP_011259472.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503195.1;locus_tag=LNP58_RS17935;product=enoyl-CoA hydratase-related protein;protein_id=WP_011259472.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3780577 3780825 . + . ID=gene-LNP58_RS17940;Name=LNP58_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17940;old_locus_tag=LNP58_17905 NZ_CP086372.1 Protein Homology CDS 3780577 3780825 . + 0 ID=cds-WP_011408865.1;Parent=gene-LNP58_RS17940;Dbxref=Genbank:WP_011408865.1;Name=WP_011408865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486267.1;locus_tag=LNP58_RS17940;product=FeoA family protein;protein_id=WP_011408865.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3780822 3782681 . + . ID=gene-LNP58_RS17945;Name=LNP58_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17945;old_locus_tag=LNP58_17910 NZ_CP086372.1 Protein Homology CDS 3780822 3782681 . + 0 ID=cds-WP_011408864.1;Parent=gene-LNP58_RS17945;Dbxref=Genbank:WP_011408864.1;Name=WP_011408864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164088.1;locus_tag=LNP58_RS17945;product=ferrous iron transporter B;protein_id=WP_011408864.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3782683 3782937 . + . ID=gene-LNP58_RS17950;Name=LNP58_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17950;old_locus_tag=LNP58_17915 NZ_CP086372.1 Protein Homology CDS 3782683 3782937 . + 0 ID=cds-WP_011259469.1;Parent=gene-LNP58_RS17950;Dbxref=Genbank:WP_011259469.1;Name=WP_011259469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051184.1;locus_tag=LNP58_RS17950;product=hypothetical protein;protein_id=WP_011259469.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3782997 3783485 . + . ID=gene-LNP58_RS17955;Name=LNP58_RS17955;end_range=3783485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS17955;old_locus_tag=LNP58_17920;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3782997 3783485 . + 0 ID=cds-LNP58_RS17955;Parent=gene-LNP58_RS17955;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3783485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159457.1;locus_tag=LNP58_RS17955;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3783791 3784993 . + . ID=gene-LNP58_RS17960;Name=LNP58_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17960;old_locus_tag=LNP58_17925 NZ_CP086372.1 Protein Homology CDS 3783791 3784993 . + 0 ID=cds-WP_011259466.1;Parent=gene-LNP58_RS17960;Dbxref=Genbank:WP_011259466.1;Name=WP_011259466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259466.1;locus_tag=LNP58_RS17960;product=PLP-dependent aminotransferase family protein;protein_id=WP_011259466.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3784990 3785709 . + . ID=gene-LNP58_RS17965;Name=LNP58_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17965;old_locus_tag=LNP58_17930 NZ_CP086372.1 Protein Homology CDS 3784990 3785709 . + 0 ID=cds-WP_011259465.1;Parent=gene-LNP58_RS17965;Dbxref=Genbank:WP_011259465.1;Name=WP_011259465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259465.1;locus_tag=LNP58_RS17965;product=MOSC domain-containing protein;protein_id=WP_011259465.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3785762 3786525 . + . ID=gene-LNP58_RS17970;Name=LNP58_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17970;old_locus_tag=LNP58_17935 NZ_CP086372.1 Protein Homology CDS 3785762 3786077 . + 0 ID=cds-WP_094187715.1-9;Parent=gene-LNP58_RS17970;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS17970;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3786077 3786525 . + 2 ID=cds-WP_094187715.1-9;Parent=gene-LNP58_RS17970;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS17970;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3786935 3787651 . + . ID=gene-LNP58_RS17975;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LNP58_RS17975;old_locus_tag=LNP58_17940 NZ_CP086372.1 Protein Homology CDS 3786935 3787651 . + 0 ID=cds-WP_011408860.1;Parent=gene-LNP58_RS17975;Dbxref=Genbank:WP_011408860.1;Name=WP_011408860.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367114.1;locus_tag=LNP58_RS17975;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_011408860.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3787891 3789015 . + . ID=gene-LNP58_RS17980;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LNP58_RS17980;old_locus_tag=LNP58_17945 NZ_CP086372.1 Protein Homology CDS 3787891 3789015 . + 0 ID=cds-WP_011259464.1;Parent=gene-LNP58_RS17980;Dbxref=Genbank:WP_011259464.1;Name=WP_011259464.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851215.1;locus_tag=LNP58_RS17980;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_011259464.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3789015 3789458 . + . ID=gene-LNP58_RS17985;Name=LNP58_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS17985;old_locus_tag=LNP58_17950 NZ_CP086372.1 Protein Homology CDS 3789015 3789458 . + 0 ID=cds-WP_012444585.1;Parent=gene-LNP58_RS17985;Dbxref=Genbank:WP_012444585.1;Name=WP_012444585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486285.1;locus_tag=LNP58_RS17985;product=hypothetical protein;protein_id=WP_012444585.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3789467 3792709 . + . ID=gene-LNP58_RS17990;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LNP58_RS17990;old_locus_tag=LNP58_17955 NZ_CP086372.1 Protein Homology CDS 3789467 3792709 . + 0 ID=cds-WP_011259463.1;Parent=gene-LNP58_RS17990;Dbxref=Genbank:WP_011259463.1;Name=WP_011259463.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806440.1;locus_tag=LNP58_RS17990;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_011259463.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3792718 3793182 . + . ID=gene-LNP58_RS17995;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LNP58_RS17995;old_locus_tag=LNP58_17960 NZ_CP086372.1 Protein Homology CDS 3792718 3793182 . + 0 ID=cds-WP_010367104.1;Parent=gene-LNP58_RS17995;Dbxref=Genbank:WP_010367104.1;Name=WP_010367104.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507602.1;locus_tag=LNP58_RS17995;product=transcription elongation factor GreA;protein_id=WP_010367104.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3793199 3794119 . + . ID=gene-LNP58_RS18000;Name=LNP58_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18000;old_locus_tag=LNP58_17965 NZ_CP086372.1 Protein Homology CDS 3793199 3794119 . + 0 ID=cds-WP_011259461.1;Parent=gene-LNP58_RS18000;Dbxref=Genbank:WP_011259461.1;Name=WP_011259461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806444.1;locus_tag=LNP58_RS18000;product=hypothetical protein;protein_id=WP_011259461.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3794116 3795855 . + . ID=gene-LNP58_RS18005;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LNP58_RS18005;old_locus_tag=LNP58_17970 NZ_CP086372.1 Protein Homology CDS 3794116 3795855 . + 0 ID=cds-WP_069959909.1;Parent=gene-LNP58_RS18005;Dbxref=Genbank:WP_069959909.1;Name=WP_069959909.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259460.1;locus_tag=LNP58_RS18005;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_069959909.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3795884 3796096 . + . ID=gene-LNP58_RS18010;Name=LNP58_RS18010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18010;old_locus_tag=LNP58_17975;partial=true;pseudo=true;start_range=.,3795884 NZ_CP086372.1 Protein Homology CDS 3795884 3796096 . + 0 ID=cds-LNP58_RS18010;Parent=gene-LNP58_RS18010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158821.1;locus_tag=LNP58_RS18010;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3795884;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3796242 3796610 . + . ID=gene-LNP58_RS18015;Name=LNP58_RS18015;end_range=3796610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18015;old_locus_tag=LNP58_17980;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3796242 3796610 . + 0 ID=cds-LNP58_RS18015;Parent=gene-LNP58_RS18015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3796610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167297.1;locus_tag=LNP58_RS18015;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3797035 3797412 . + . ID=gene-LNP58_RS18020;Name=LNP58_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18020;old_locus_tag=LNP58_17985 NZ_CP086372.1 Protein Homology CDS 3797035 3797412 . + 0 ID=cds-WP_011408855.1;Parent=gene-LNP58_RS18020;Dbxref=Genbank:WP_011408855.1;Name=WP_011408855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004666662.1;locus_tag=LNP58_RS18020;product=hypothetical protein;protein_id=WP_011408855.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3797573 3797821 . - . ID=gene-LNP58_RS18025;Name=LNP58_RS18025;end_range=3797821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18025;old_locus_tag=LNP58_17990;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3797573 3797821 . - 0 ID=cds-LNP58_RS18025;Parent=gene-LNP58_RS18025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3797821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=LNP58_RS18025;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3798827 3799789 . - . ID=gene-LNP58_RS18035;Name=LNP58_RS18035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18035;old_locus_tag=LNP58_18000;pseudo=true NZ_CP086372.1 Protein Homology CDS 3798827 3799789 . - 0 ID=cds-LNP58_RS18035;Parent=gene-LNP58_RS18035;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378466.1;locus_tag=LNP58_RS18035;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3799672 3800922 . - . ID=gene-LNP58_RS18040;Name=LNP58_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18040;old_locus_tag=LNP58_18005 NZ_CP086372.1 Protein Homology CDS 3799672 3800922 . - 0 ID=cds-WP_044757387.1;Parent=gene-LNP58_RS18040;Dbxref=Genbank:WP_044757387.1;Name=WP_044757387.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155284.1;locus_tag=LNP58_RS18040;product=acyltransferase family protein;protein_id=WP_044757387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3801082 3802029 . + . ID=gene-LNP58_RS18045;Name=LNP58_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18045;old_locus_tag=LNP58_18010 NZ_CP086372.1 Protein Homology CDS 3801082 3802029 . + 0 ID=cds-WP_044756748.1;Parent=gene-LNP58_RS18045;Dbxref=Genbank:WP_044756748.1;Name=WP_044756748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155283.1;locus_tag=LNP58_RS18045;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_044756748.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3802283 3803408 . + . ID=gene-LNP58_RS18050;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LNP58_RS18050;old_locus_tag=LNP58_18015 NZ_CP086372.1 Protein Homology CDS 3802283 3802357 . + 0 ID=cds-WP_014503214.1;Parent=gene-LNP58_RS18050;Dbxref=Genbank:WP_014503214.1;Name=WP_014503214.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=LNP58_RS18050;product=peptide chain release factor 2;protein_id=WP_014503214.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3802359 3803408 . + 0 ID=cds-WP_014503214.1;Parent=gene-LNP58_RS18050;Dbxref=Genbank:WP_014503214.1;Name=WP_014503214.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=LNP58_RS18050;product=peptide chain release factor 2;protein_id=WP_014503214.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3803612 3805129 . + . ID=gene-LNP58_RS18055;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LNP58_RS18055;old_locus_tag=LNP58_18020 NZ_CP086372.1 Protein Homology CDS 3803612 3805129 . + 0 ID=cds-WP_044756749.1;Parent=gene-LNP58_RS18055;Dbxref=Genbank:WP_044756749.1;Name=WP_044756749.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486300.1;locus_tag=LNP58_RS18055;product=lysine--tRNA ligase;protein_id=WP_044756749.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3805271 3806407 . + . ID=gene-LNP58_RS18060;Name=LNP58_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18060;old_locus_tag=LNP58_18025 NZ_CP086372.1 Protein Homology CDS 3805271 3806407 . + 0 ID=cds-WP_011408849.1;Parent=gene-LNP58_RS18060;Dbxref=Genbank:WP_011408849.1;Name=WP_011408849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922786.1;locus_tag=LNP58_RS18060;product=two-component system response regulator;protein_id=WP_011408849.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3806772 3808949 . + . ID=gene-LNP58_RS18065;Name=LNP58_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18065;old_locus_tag=LNP58_18030 NZ_CP086372.1 Protein Homology CDS 3806772 3808949 . + 0 ID=cds-WP_075242179.1;Parent=gene-LNP58_RS18065;Dbxref=Genbank:WP_075242179.1;Name=WP_075242179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174224.1;locus_tag=LNP58_RS18065;product=ATP-binding protein;protein_id=WP_075242179.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3808961 3809830 . - . ID=gene-LNP58_RS18070;Name=LNP58_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18070;old_locus_tag=LNP58_18035 NZ_CP086372.1 Protein Homology CDS 3808961 3809830 . - 0 ID=cds-WP_011408848.1;Parent=gene-LNP58_RS18070;Dbxref=Genbank:WP_011408848.1;Name=WP_011408848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486308.1;locus_tag=LNP58_RS18070;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_011408848.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3810007 3811689 . - . ID=gene-LNP58_RS18075;Name=LNP58_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18075;old_locus_tag=LNP58_18040 NZ_CP086372.1 Protein Homology CDS 3810007 3811689 . - 0 ID=cds-WP_075242180.1;Parent=gene-LNP58_RS18075;Dbxref=Genbank:WP_075242180.1;Name=WP_075242180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571491.1;locus_tag=LNP58_RS18075;product=long-chain fatty acid--CoA ligase;protein_id=WP_075242180.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3811787 3812216 . + . ID=gene-LNP58_RS18080;Name=LNP58_RS18080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18080;old_locus_tag=LNP58_18045;pseudo=true NZ_CP086372.1 Protein Homology CDS 3811787 3812216 . + 0 ID=cds-LNP58_RS18080;Parent=gene-LNP58_RS18080;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155275.1;locus_tag=LNP58_RS18080;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3812339 3815107 . - . ID=gene-LNP58_RS18085;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LNP58_RS18085;old_locus_tag=LNP58_18050 NZ_CP086372.1 Protein Homology CDS 3812339 3815107 . - 0 ID=cds-WP_011259446.1;Parent=gene-LNP58_RS18085;Dbxref=Genbank:WP_011259446.1;Name=WP_011259446.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159833.1;locus_tag=LNP58_RS18085;product=aconitate hydratase AcnA;protein_id=WP_011259446.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3815255 3815503 . + . ID=gene-LNP58_RS18090;Name=LNP58_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18090;old_locus_tag=LNP58_18055 NZ_CP086372.1 Protein Homology CDS 3815255 3815503 . + 0 ID=cds-WP_003486316.1;Parent=gene-LNP58_RS18090;Dbxref=Genbank:WP_003486316.1;Name=WP_003486316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115874.1;locus_tag=LNP58_RS18090;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003486316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3815500 3815910 . + . ID=gene-LNP58_RS18095;Name=LNP58_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18095;old_locus_tag=LNP58_18060 NZ_CP086372.1 Protein Homology CDS 3815500 3815910 . + 0 ID=cds-WP_011259444.1;Parent=gene-LNP58_RS18095;Dbxref=Genbank:WP_011259444.1;Name=WP_011259444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259444.1;locus_tag=LNP58_RS18095;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_011259444.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3815976 3818567 . + . ID=gene-LNP58_RS18100;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LNP58_RS18100;old_locus_tag=LNP58_18065 NZ_CP086372.1 Protein Homology CDS 3815976 3818567 . + 0 ID=cds-WP_011259443.1;Parent=gene-LNP58_RS18100;Dbxref=Genbank:WP_011259443.1;Name=WP_011259443.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=LNP58_RS18100;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_011259443.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3818921 3819736 . + . ID=gene-LNP58_RS18105;Name=LNP58_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18105;old_locus_tag=LNP58_18070 NZ_CP086372.1 Protein Homology CDS 3818921 3819736 . + 0 ID=cds-WP_011259442.1;Parent=gene-LNP58_RS18105;Dbxref=Genbank:WP_011259442.1;Name=WP_011259442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259442.1;locus_tag=LNP58_RS18105;product=alpha/beta fold hydrolase;protein_id=WP_011259442.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3820224 3820300 . + . ID=gene-LNP58_RS18110;Name=LNP58_RS18110;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18110;old_locus_tag=LNP58_18075 NZ_CP086372.1 cmsearch ncRNA 3820224 3820300 . + . ID=rna-LNP58_RS18110;Parent=gene-LNP58_RS18110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18110;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3820224 3820300 . + . ID=exon-LNP58_RS18110-1;Parent=rna-LNP58_RS18110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18110;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3820392 3822737 . - . ID=gene-LNP58_RS18115;Name=LNP58_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18115;old_locus_tag=LNP58_18080 NZ_CP086372.1 Protein Homology CDS 3820392 3822737 . - 0 ID=cds-WP_228329600.1;Parent=gene-LNP58_RS18115;Dbxref=Genbank:WP_228329600.1;Name=WP_228329600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303209.1;locus_tag=LNP58_RS18115;product=EAL domain-containing protein;protein_id=WP_228329600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3822744 3823820 . - . ID=gene-LNP58_RS18120;Name=LNP58_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18120;old_locus_tag=LNP58_18085 NZ_CP086372.1 Protein Homology CDS 3822744 3823820 . - 0 ID=cds-WP_011259440.1;Parent=gene-LNP58_RS18120;Dbxref=Genbank:WP_011259440.1;Name=WP_011259440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914919.1;locus_tag=LNP58_RS18120;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_011259440.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3823817 3824413 . - . ID=gene-LNP58_RS18125;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=LNP58_RS18125;old_locus_tag=LNP58_18090 NZ_CP086372.1 Protein Homology CDS 3823817 3824413 . - 0 ID=cds-WP_011259439.1;Parent=gene-LNP58_RS18125;Dbxref=Genbank:WP_011259439.1;Name=WP_011259439.1;Ontology_term=GO:0006935,GO:0050568;gbkey=CDS;gene=cheD;go_function=protein-glutamine glutaminase activity|0050568||IEA;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486330.1;locus_tag=LNP58_RS18125;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_011259439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3824410 3825276 . - . ID=gene-LNP58_RS18130;Name=LNP58_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18130;old_locus_tag=LNP58_18095 NZ_CP086372.1 Protein Homology CDS 3824410 3825276 . - 0 ID=cds-WP_011408845.1;Parent=gene-LNP58_RS18130;Dbxref=Genbank:WP_011408845.1;Name=WP_011408845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302811.1;locus_tag=LNP58_RS18130;product=chemotaxis protein CheR;protein_id=WP_011408845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3825534 3827927 . - . ID=gene-LNP58_RS18135;Name=LNP58_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18135;old_locus_tag=LNP58_18100 NZ_CP086372.1 Protein Homology CDS 3825534 3827927 . - 0 ID=cds-WP_012444601.1;Parent=gene-LNP58_RS18135;Dbxref=Genbank:WP_012444601.1;Name=WP_012444601.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486335.1;locus_tag=LNP58_RS18135;product=methyl-accepting chemotaxis protein;protein_id=WP_012444601.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3828012 3828397 . - . ID=gene-LNP58_RS18140;Name=LNP58_RS18140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18140;old_locus_tag=LNP58_18105;pseudo=true NZ_CP086372.1 Protein Homology CDS 3828012 3828397 . - 0 ID=cds-LNP58_RS18140;Parent=gene-LNP58_RS18140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486337.1;locus_tag=LNP58_RS18140;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3828578 3829376 . - . ID=gene-LNP58_RS18145;Name=LNP58_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18145;old_locus_tag=LNP58_18110 NZ_CP086372.1 Protein Homology CDS 3829105 3829376 . - 0 ID=cds-WP_094187763.1-5;Parent=gene-LNP58_RS18145;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS18145;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3828578 3829106 . - 1 ID=cds-WP_094187763.1-5;Parent=gene-LNP58_RS18145;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS18145;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3829420 3829995 . + . ID=gene-LNP58_RS18150;Name=LNP58_RS18150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18150;old_locus_tag=LNP58_18115;partial=true;pseudo=true;start_range=.,3829420 NZ_CP086372.1 Protein Homology CDS 3829420 3829995 . + 0 ID=cds-LNP58_RS18150;Parent=gene-LNP58_RS18150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS18150;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,3829420;transl_table=11 NZ_CP086372.1 RefSeq gene 3830225 3830707 . - . ID=gene-LNP58_RS18155;Name=LNP58_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18155;old_locus_tag=LNP58_18120 NZ_CP086372.1 Protein Homology CDS 3830225 3830707 . - 0 ID=cds-WP_011408841.1;Parent=gene-LNP58_RS18155;Dbxref=Genbank:WP_011408841.1;Name=WP_011408841.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486339.1;locus_tag=LNP58_RS18155;product=chemotaxis protein CheW;protein_id=WP_011408841.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3830843 3831628 . - . ID=gene-LNP58_RS18160;Name=LNP58_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18160;old_locus_tag=LNP58_18125 NZ_CP086372.1 Protein Homology CDS 3830843 3831628 . - 0 ID=cds-WP_011408840.1;Parent=gene-LNP58_RS18160;Dbxref=Genbank:WP_011408840.1;Name=WP_011408840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159446.1;locus_tag=LNP58_RS18160;product=flagellar brake protein;protein_id=WP_011408840.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3831911 3831987 . - . ID=gene-LNP58_RS18165;Name=LNP58_RS18165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18165;old_locus_tag=LNP58_18130 NZ_CP086372.1 cmsearch ncRNA 3831911 3831987 . - . ID=rna-LNP58_RS18165;Parent=gene-LNP58_RS18165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18165;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3831911 3831987 . - . ID=exon-LNP58_RS18165-1;Parent=rna-LNP58_RS18165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18165;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3832598 3834859 . - . ID=gene-LNP58_RS18170;Name=LNP58_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18170;old_locus_tag=LNP58_18135 NZ_CP086372.1 Protein Homology CDS 3832598 3834859 . - 0 ID=cds-WP_011408839.1;Parent=gene-LNP58_RS18170;Dbxref=Genbank:WP_011408839.1;Name=WP_011408839.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155262.1;locus_tag=LNP58_RS18170;product=methyl-accepting chemotaxis protein;protein_id=WP_011408839.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3835253 3837514 . - . ID=gene-LNP58_RS18175;Name=LNP58_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18175;old_locus_tag=LNP58_18140 NZ_CP086372.1 Protein Homology CDS 3835253 3837514 . - 0 ID=cds-WP_011259431.1;Parent=gene-LNP58_RS18175;Dbxref=Genbank:WP_011259431.1;Name=WP_011259431.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155261.1;locus_tag=LNP58_RS18175;product=methyl-accepting chemotaxis protein;protein_id=WP_011259431.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3838107 3840182 . - . ID=gene-LNP58_RS18180;Name=LNP58_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18180;old_locus_tag=LNP58_18145 NZ_CP086372.1 Protein Homology CDS 3838107 3840182 . - 0 ID=cds-WP_113085530.1;Parent=gene-LNP58_RS18180;Dbxref=Genbank:WP_113085530.1;Name=WP_113085530.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444606.1;locus_tag=LNP58_RS18180;product=methyl-accepting chemotaxis protein;protein_id=WP_113085530.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3840866 3842977 . - . ID=gene-LNP58_RS18185;Name=LNP58_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18185;old_locus_tag=LNP58_18150 NZ_CP086372.1 Protein Homology CDS 3840866 3842977 . - 0 ID=cds-WP_075242161.1;Parent=gene-LNP58_RS18185;Dbxref=Genbank:WP_075242161.1;Name=WP_075242161.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155257.1;locus_tag=LNP58_RS18185;product=methyl-accepting chemotaxis protein;protein_id=WP_075242161.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3843413 3843489 . - . ID=gene-LNP58_RS18190;Name=LNP58_RS18190;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18190;old_locus_tag=LNP58_18155 NZ_CP086372.1 cmsearch ncRNA 3843413 3843489 . - . ID=rna-LNP58_RS18190;Parent=gene-LNP58_RS18190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18190;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3843413 3843489 . - . ID=exon-LNP58_RS18190-1;Parent=rna-LNP58_RS18190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18190;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3843708 3845966 . - . ID=gene-LNP58_RS18195;Name=LNP58_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18195;old_locus_tag=LNP58_18160 NZ_CP086372.1 Protein Homology CDS 3843708 3845966 . - 0 ID=cds-WP_075242160.1;Parent=gene-LNP58_RS18195;Dbxref=Genbank:WP_075242160.1;Name=WP_075242160.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113509.1;locus_tag=LNP58_RS18195;product=methyl-accepting chemotaxis protein;protein_id=WP_075242160.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3846207 3847172 . - . ID=gene-LNP58_RS18200;Name=LNP58_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18200;old_locus_tag=LNP58_18165 NZ_CP086372.1 Protein Homology CDS 3846207 3847172 . - 0 ID=cds-WP_109182116.1;Parent=gene-LNP58_RS18200;Dbxref=Genbank:WP_109182116.1;Name=WP_109182116.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS18200;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109182116.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3847669 3850011 . - . ID=gene-LNP58_RS18205;Name=LNP58_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18205;old_locus_tag=LNP58_18170 NZ_CP086372.1 Protein Homology CDS 3847669 3850011 . - 0 ID=cds-WP_011408834.1;Parent=gene-LNP58_RS18205;Dbxref=Genbank:WP_011408834.1;Name=WP_011408834.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994843.1;locus_tag=LNP58_RS18205;product=methyl-accepting chemotaxis protein;protein_id=WP_011408834.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3850025 3850786 . - . ID=gene-LNP58_RS18210;Name=LNP58_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18210;old_locus_tag=LNP58_18175 NZ_CP086372.1 Protein Homology CDS 3850025 3850786 . - 0 ID=cds-WP_011408833.1;Parent=gene-LNP58_RS18210;Dbxref=Genbank:WP_011408833.1;Name=WP_011408833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914931.1;locus_tag=LNP58_RS18210;product=transporter;protein_id=WP_011408833.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3851102 3852293 . - . ID=gene-LNP58_RS18215;Name=LNP58_RS18215;end_range=3852293,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18215;old_locus_tag=LNP58_18180;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3851102 3852293 . - 0 ID=cds-LNP58_RS18215;Parent=gene-LNP58_RS18215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=3852293,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090085.1;locus_tag=LNP58_RS18215;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3852300 3853193 . - . ID=gene-LNP58_RS18220;Name=LNP58_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18220;old_locus_tag=LNP58_18185 NZ_CP086372.1 Protein Homology CDS 3852300 3853193 . - 0 ID=cds-WP_229001907.1;Parent=gene-LNP58_RS18220;Dbxref=Genbank:WP_229001907.1;Name=WP_229001907.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS18220;product=IS30 family transposase;protein_id=WP_229001907.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3853521 3853760 . - . ID=gene-LNP58_RS18225;Name=LNP58_RS18225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18225;old_locus_tag=LNP58_18190;partial=true;pseudo=true;start_range=.,3853521 NZ_CP086372.1 Protein Homology CDS 3853521 3853760 . - 0 ID=cds-LNP58_RS18225;Parent=gene-LNP58_RS18225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612229.1;locus_tag=LNP58_RS18225;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3853521;transl_table=11 NZ_CP086372.1 RefSeq gene 3853913 3855922 . - . ID=gene-LNP58_RS18230;Name=LNP58_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18230;old_locus_tag=LNP58_18195 NZ_CP086372.1 Protein Homology CDS 3853913 3855922 . - 0 ID=cds-WP_011408829.1;Parent=gene-LNP58_RS18230;Dbxref=Genbank:WP_011408829.1;Name=WP_011408829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577777.1;locus_tag=LNP58_RS18230;product=chemotaxis protein CheA;protein_id=WP_011408829.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3855956 3856321 . - . ID=gene-LNP58_RS18235;Name=LNP58_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18235;old_locus_tag=LNP58_18200 NZ_CP086372.1 Protein Homology CDS 3855956 3856321 . - 0 ID=cds-WP_002806565.1;Parent=gene-LNP58_RS18235;Dbxref=Genbank:WP_002806565.1;Name=WP_002806565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806565.1;locus_tag=LNP58_RS18235;product=response regulator;protein_id=WP_002806565.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3856318 3856626 . - . ID=gene-LNP58_RS18240;Name=LNP58_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18240;old_locus_tag=LNP58_18205 NZ_CP086372.1 Protein Homology CDS 3856318 3856626 . - 0 ID=cds-WP_011259421.1;Parent=gene-LNP58_RS18240;Dbxref=Genbank:WP_011259421.1;Name=WP_011259421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302363.1;locus_tag=LNP58_RS18240;product=STAS domain-containing protein;protein_id=WP_011259421.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3856727 3857749 . - . ID=gene-LNP58_RS18245;Name=LNP58_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18245;old_locus_tag=LNP58_18210 NZ_CP086372.1 Protein Homology CDS 3856727 3857749 . - 0 ID=cds-WP_042465006.1;Parent=gene-LNP58_RS18245;Dbxref=Genbank:WP_042465006.1;Name=WP_042465006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118095.1;locus_tag=LNP58_RS18245;product=chemotaxis protein CheW;protein_id=WP_042465006.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3857746 3858528 . - . ID=gene-LNP58_RS18250;Name=LNP58_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18250;old_locus_tag=LNP58_18215 NZ_CP086372.1 Protein Homology CDS 3857746 3858528 . - 0 ID=cds-WP_011259419.1;Parent=gene-LNP58_RS18250;Dbxref=Genbank:WP_011259419.1;Name=WP_011259419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503257.1;locus_tag=LNP58_RS18250;product=ParA family protein;protein_id=WP_011259419.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3858530 3859504 . - . ID=gene-LNP58_RS18255;Name=motD;gbkey=Gene;gene=motD;gene_biotype=protein_coding;locus_tag=LNP58_RS18255;old_locus_tag=LNP58_18220 NZ_CP086372.1 Protein Homology CDS 3858530 3859504 . - 0 ID=cds-WP_011408827.1;Parent=gene-LNP58_RS18255;Dbxref=Genbank:WP_011408827.1;Name=WP_011408827.1;gbkey=CDS;gene=motD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931860.1;locus_tag=LNP58_RS18255;product=flagellar motor protein MotD;protein_id=WP_011408827.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3859511 3860251 . - . ID=gene-LNP58_RS18260;Name=LNP58_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18260;old_locus_tag=LNP58_18225 NZ_CP086372.1 Protein Homology CDS 3859511 3860251 . - 0 ID=cds-WP_011259417.1;Parent=gene-LNP58_RS18260;Dbxref=Genbank:WP_011259417.1;Name=WP_011259417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806574.1;locus_tag=LNP58_RS18260;product=flagellar motor protein;protein_id=WP_011259417.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3860340 3860693 . - . ID=gene-LNP58_RS18265;Name=LNP58_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18265;old_locus_tag=LNP58_18230 NZ_CP086372.1 GeneMarkS-2+ CDS 3860340 3860693 . - 0 ID=cds-WP_027703781.1;Parent=gene-LNP58_RS18265;Dbxref=Genbank:WP_027703781.1;Name=WP_027703781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18265;product=hypothetical protein;protein_id=WP_027703781.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3860690 3861181 . - . ID=gene-LNP58_RS18270;Name=LNP58_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18270;old_locus_tag=LNP58_18235 NZ_CP086372.1 Protein Homology CDS 3860690 3861181 . - 0 ID=cds-WP_011408826.1;Parent=gene-LNP58_RS18270;Dbxref=Genbank:WP_011408826.1;Name=WP_011408826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408826.1;locus_tag=LNP58_RS18270;product=TonB-dependent receptor;protein_id=WP_011408826.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3861228 3861620 . - . ID=gene-LNP58_RS18275;Name=LNP58_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18275;old_locus_tag=LNP58_18240 NZ_CP086372.1 Protein Homology CDS 3861228 3861620 . - 0 ID=cds-WP_011408825.1;Parent=gene-LNP58_RS18275;Dbxref=Genbank:WP_011408825.1;Name=WP_011408825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408825.1;locus_tag=LNP58_RS18275;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_011408825.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3861772 3862479 . - . ID=gene-LNP58_RS18280;Name=LNP58_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18280;old_locus_tag=LNP58_18245 NZ_CP086372.1 Protein Homology CDS 3861772 3862479 . - 0 ID=cds-WP_044756757.1;Parent=gene-LNP58_RS18280;Dbxref=Genbank:WP_044756757.1;Name=WP_044756757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444621.1;locus_tag=LNP58_RS18280;product=superoxide dismutase;protein_id=WP_044756757.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3862555 3862902 . - . ID=gene-LNP58_RS18285;Name=LNP58_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18285;old_locus_tag=LNP58_18250 NZ_CP086372.1 GeneMarkS-2+ CDS 3862555 3862902 . - 0 ID=cds-WP_125168759.1;Parent=gene-LNP58_RS18285;Dbxref=Genbank:WP_125168759.1;Name=WP_125168759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18285;product=hypothetical protein;protein_id=WP_125168759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3862904 3864709 . - . ID=gene-LNP58_RS18290;Name=LNP58_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18290;old_locus_tag=LNP58_18255 NZ_CP086372.1 Protein Homology CDS 3862904 3864709 . - 0 ID=cds-WP_044756758.1;Parent=gene-LNP58_RS18290;Dbxref=Genbank:WP_044756758.1;Name=WP_044756758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408823.1;locus_tag=LNP58_RS18290;product=TonB-dependent receptor;protein_id=WP_044756758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3864964 3865416 . - . ID=gene-LNP58_RS18295;Name=LNP58_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18295;old_locus_tag=LNP58_18260 NZ_CP086372.1 Protein Homology CDS 3864964 3865416 . - 0 ID=cds-WP_042465003.1;Parent=gene-LNP58_RS18295;Dbxref=Genbank:WP_042465003.1;Name=WP_042465003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302875.1;locus_tag=LNP58_RS18295;product=hypothetical protein;protein_id=WP_042465003.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3866397 3869507 . + . ID=gene-LNP58_RS18300;Name=LNP58_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18300;old_locus_tag=LNP58_18265 NZ_CP086372.1 Protein Homology CDS 3866397 3869507 . + 0 ID=cds-WP_011408820.1;Parent=gene-LNP58_RS18300;Dbxref=Genbank:WP_011408820.1;Name=WP_011408820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576378.1;locus_tag=LNP58_RS18300;product=TonB-dependent receptor;protein_id=WP_011408820.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3869816 3870316 . + . ID=gene-LNP58_RS18305;Name=LNP58_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18305;old_locus_tag=LNP58_18270 NZ_CP086372.1 GeneMarkS-2+ CDS 3869816 3870316 . + 0 ID=cds-WP_125168758.1;Parent=gene-LNP58_RS18305;Dbxref=Genbank:WP_125168758.1;Name=WP_125168758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18305;product=hypothetical protein;protein_id=WP_125168758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3870313 3870921 . + . ID=gene-LNP58_RS18310;Name=LNP58_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18310;old_locus_tag=LNP58_18275 NZ_CP086372.1 GeneMarkS-2+ CDS 3870313 3870921 . + 0 ID=cds-WP_011408818.1;Parent=gene-LNP58_RS18310;Dbxref=Genbank:WP_011408818.1;Name=WP_011408818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18310;product=hypothetical protein;protein_id=WP_011408818.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3870973 3871941 . + . ID=gene-LNP58_RS18315;Name=LNP58_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18315;old_locus_tag=LNP58_18280 NZ_CP086372.1 Protein Homology CDS 3870973 3871941 . + 0 ID=cds-WP_011258802.1-13;Parent=gene-LNP58_RS18315;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS18315;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3872112 3872342 . + . ID=gene-LNP58_RS18320;Name=LNP58_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18320;old_locus_tag=LNP58_18285 NZ_CP086372.1 Protein Homology CDS 3872112 3872342 . + 0 ID=cds-WP_229001908.1;Parent=gene-LNP58_RS18320;Dbxref=Genbank:WP_229001908.1;Name=WP_229001908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027488.2;locus_tag=LNP58_RS18320;product=hypothetical protein;protein_id=WP_229001908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3872441 3873076 . - . ID=gene-LNP58_RS18325;Name=LNP58_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18325;old_locus_tag=LNP58_18290 NZ_CP086372.1 Protein Homology CDS 3872441 3873076 . - 0 ID=cds-WP_075242278.1;Parent=gene-LNP58_RS18325;Dbxref=Genbank:WP_075242278.1;Name=WP_075242278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380996.1;locus_tag=LNP58_RS18325;product=hypothetical protein;protein_id=WP_075242278.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3873496 3873765 . + . ID=gene-LNP58_RS18330;Name=LNP58_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18330;old_locus_tag=LNP58_18295 NZ_CP086372.1 Protein Homology CDS 3873496 3873765 . + 0 ID=cds-WP_228329604.1;Parent=gene-LNP58_RS18330;Dbxref=Genbank:WP_228329604.1;Name=WP_228329604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463134.1;locus_tag=LNP58_RS18330;product=hypothetical protein;protein_id=WP_228329604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3873762 3874178 . + . ID=gene-LNP58_RS18335;Name=LNP58_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18335;old_locus_tag=LNP58_18300 NZ_CP086372.1 Protein Homology CDS 3873762 3874178 . + 0 ID=cds-WP_011259409.1;Parent=gene-LNP58_RS18335;Dbxref=Genbank:WP_011259409.1;Name=WP_011259409.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507646.1;locus_tag=LNP58_RS18335;product=SymE family type I addiction module toxin;protein_id=WP_011259409.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3874180 3875070 . - . ID=gene-LNP58_RS18340;Name=LNP58_RS18340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18340;old_locus_tag=LNP58_18305;partial=true;pseudo=true;start_range=.,3874180 NZ_CP086372.1 Protein Homology CDS 3874180 3875070 . - 0 ID=cds-LNP58_RS18340;Parent=gene-LNP58_RS18340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444485.1;locus_tag=LNP58_RS18340;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3874180;transl_table=11 NZ_CP086372.1 RefSeq gene 3875283 3876602 . - . ID=gene-LNP58_RS18345;Name=LNP58_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18345;old_locus_tag=LNP58_18310 NZ_CP086372.1 Protein Homology CDS 3875283 3876602 . - 0 ID=cds-WP_011408815.1;Parent=gene-LNP58_RS18345;Dbxref=Genbank:WP_011408815.1;Name=WP_011408815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS18345;product=IS701-like element ISXo15 family transposase;protein_id=WP_011408815.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3876830 3877144 . - . ID=gene-LNP58_RS18350;Name=LNP58_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18350;old_locus_tag=LNP58_18315 NZ_CP086372.1 Protein Homology CDS 3876830 3877144 . - 0 ID=cds-WP_011408814.1;Parent=gene-LNP58_RS18350;Dbxref=Genbank:WP_011408814.1;Name=WP_011408814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403016.1;locus_tag=LNP58_RS18350;product=DUF1153 domain-containing protein;protein_id=WP_011408814.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3877200 3878030 . - . ID=gene-LNP58_RS18355;Name=LNP58_RS18355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18355;old_locus_tag=LNP58_18320;partial=true;pseudo=true;start_range=.,3877200 NZ_CP086372.1 Protein Homology CDS 3877200 3878030 . - 0 ID=cds-LNP58_RS18355;Parent=gene-LNP58_RS18355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012701750.1;locus_tag=LNP58_RS18355;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,3877200;transl_table=11 NZ_CP086372.1 RefSeq gene 3878296 3878580 . + . ID=gene-LNP58_RS18360;Name=LNP58_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18360;old_locus_tag=LNP58_18325 NZ_CP086372.1 Protein Homology CDS 3878296 3878580 . + 0 ID=cds-WP_012444628.1;Parent=gene-LNP58_RS18360;Dbxref=Genbank:WP_012444628.1;Name=WP_012444628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504983.1;locus_tag=LNP58_RS18360;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_012444628.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3878620 3881919 . + . ID=gene-LNP58_RS18365;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=pseudogene;locus_tag=LNP58_RS18365;old_locus_tag=LNP58_18330;pseudo=true NZ_CP086372.1 Protein Homology CDS 3878620 3881919 . + 0 ID=cds-LNP58_RS18365;Parent=gene-LNP58_RS18365;Note=internal stop;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505114.1;locus_tag=LNP58_RS18365;product=type III secretion system effector avirulence protein AvrBs3;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3881976 3882095 . - . ID=gene-LNP58_RS18370;Name=LNP58_RS18370;end_range=3882095,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18370;old_locus_tag=LNP58_18335;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3881976 3882095 . - 0 ID=cds-LNP58_RS18370;Parent=gene-LNP58_RS18370;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3882095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=LNP58_RS18370;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3882118 3883211 . - . ID=gene-LNP58_RS18375;Name=LNP58_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18375;old_locus_tag=LNP58_18340 NZ_CP086372.1 Protein Homology CDS 3883025 3883211 . - 0 ID=cds-WP_228329606.1;Parent=gene-LNP58_RS18375;Dbxref=Genbank:WP_228329606.1;Name=WP_228329606.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LNP58_RS18375;product=IS3 family transposase;protein_id=WP_228329606.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3882118 3883025 . - 2 ID=cds-WP_228329606.1;Parent=gene-LNP58_RS18375;Dbxref=Genbank:WP_228329606.1;Name=WP_228329606.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LNP58_RS18375;product=IS3 family transposase;protein_id=WP_228329606.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3883465 3886227 . + . ID=gene-LNP58_RS18380;Name=LNP58_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18380;old_locus_tag=LNP58_18345 NZ_CP086372.1 Protein Homology CDS 3883465 3886227 . + 0 ID=cds-WP_069964551.1;Parent=gene-LNP58_RS18380;Dbxref=Genbank:WP_069964551.1;Name=WP_069964551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444636.1;locus_tag=LNP58_RS18380;product=type VI secretion system Vgr family protein;protein_id=WP_069964551.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3886236 3887165 . + . ID=gene-LNP58_RS18385;Name=LNP58_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18385;old_locus_tag=LNP58_18350 NZ_CP086372.1 Protein Homology CDS 3886236 3887165 . + 0 ID=cds-WP_069964550.1;Parent=gene-LNP58_RS18385;Dbxref=Genbank:WP_069964550.1;Name=WP_069964550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=LNP58_RS18385;product=DUF4123 domain-containing protein;protein_id=WP_069964550.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3887413 3887541 . - . ID=gene-LNP58_RS23435;Name=LNP58_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23435 NZ_CP086372.1 GeneMarkS-2+ CDS 3887413 3887541 . - 0 ID=cds-WP_257784780.1;Parent=gene-LNP58_RS23435;Dbxref=Genbank:WP_257784780.1;Name=WP_257784780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23435;product=hypothetical protein;protein_id=WP_257784780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3887654 3889996 . + . ID=gene-LNP58_RS18390;Name=LNP58_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18390;old_locus_tag=LNP58_18355 NZ_CP086372.1 Protein Homology CDS 3887654 3889996 . + 0 ID=cds-WP_228329754.1;Parent=gene-LNP58_RS18390;Dbxref=Genbank:WP_228329754.1;Name=WP_228329754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408806.1;locus_tag=LNP58_RS18390;product=hypothetical protein;protein_id=WP_228329754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3890027 3890770 . + . ID=gene-LNP58_RS18395;Name=LNP58_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18395;old_locus_tag=LNP58_18360 NZ_CP086372.1 Protein Homology CDS 3890027 3890770 . + 0 ID=cds-WP_042465604.1;Parent=gene-LNP58_RS18395;Dbxref=Genbank:WP_042465604.1;Name=WP_042465604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408807.1;locus_tag=LNP58_RS18395;product=hypothetical protein;protein_id=WP_042465604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3890795 3893137 . + . ID=gene-LNP58_RS18400;Name=LNP58_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18400;old_locus_tag=LNP58_18365 NZ_CP086372.1 Protein Homology CDS 3890795 3893137 . + 0 ID=cds-WP_069959894.1;Parent=gene-LNP58_RS18400;Dbxref=Genbank:WP_069959894.1;Name=WP_069959894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408804.1;locus_tag=LNP58_RS18400;product=hypothetical protein;protein_id=WP_069959894.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3893166 3893894 . + . ID=gene-LNP58_RS18405;Name=LNP58_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18405;old_locus_tag=LNP58_18370 NZ_CP086372.1 Protein Homology CDS 3893166 3893894 . + 0 ID=cds-WP_014503414.1;Parent=gene-LNP58_RS18405;Dbxref=Genbank:WP_014503414.1;Name=WP_014503414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259611.1;locus_tag=LNP58_RS18405;product=hypothetical protein;protein_id=WP_014503414.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3893919 3896261 . + . ID=gene-LNP58_RS18410;Name=LNP58_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18410;old_locus_tag=LNP58_18375 NZ_CP086372.1 Protein Homology CDS 3893919 3896261 . + 0 ID=cds-WP_069959893.1;Parent=gene-LNP58_RS18410;Dbxref=Genbank:WP_069959893.1;Name=WP_069959893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408803.1;locus_tag=LNP58_RS18410;product=hypothetical protein;protein_id=WP_069959893.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3896293 3897024 . + . ID=gene-LNP58_RS18415;Name=LNP58_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18415;old_locus_tag=LNP58_18380 NZ_CP086372.1 Protein Homology CDS 3896293 3897024 . + 0 ID=cds-WP_041182891.1;Parent=gene-LNP58_RS18415;Dbxref=Genbank:WP_041182891.1;Name=WP_041182891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408807.1;locus_tag=LNP58_RS18415;product=hypothetical protein;protein_id=WP_041182891.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3897042 3899387 . + . ID=gene-LNP58_RS18420;Name=LNP58_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18420;old_locus_tag=LNP58_18385 NZ_CP086372.1 Protein Homology CDS 3897042 3899387 . + 0 ID=cds-WP_069959892.1;Parent=gene-LNP58_RS18420;Dbxref=Genbank:WP_069959892.1;Name=WP_069959892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408802.1;locus_tag=LNP58_RS18420;product=hypothetical protein;protein_id=WP_069959892.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3899682 3900650 . - . ID=gene-LNP58_RS18425;Name=LNP58_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18425;old_locus_tag=LNP58_18390 NZ_CP086372.1 Protein Homology CDS 3899682 3900650 . - 0 ID=cds-WP_011258802.1-14;Parent=gene-LNP58_RS18425;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS18425;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3900724 3900987 . + . ID=gene-LNP58_RS18430;Name=LNP58_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18430;old_locus_tag=LNP58_18395 NZ_CP086372.1 GeneMarkS-2+ CDS 3900724 3900987 . + 0 ID=cds-WP_228329607.1;Parent=gene-LNP58_RS18430;Dbxref=Genbank:WP_228329607.1;Name=WP_228329607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18430;product=hypothetical protein;protein_id=WP_228329607.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3901317 3902594 . - . ID=gene-LNP58_RS18435;Name=LNP58_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18435;old_locus_tag=LNP58_18400 NZ_CP086372.1 Protein Homology CDS 3901317 3902594 . - 0 ID=cds-WP_012444645.1;Parent=gene-LNP58_RS18435;Dbxref=Genbank:WP_012444645.1;Name=WP_012444645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237567.1;locus_tag=LNP58_RS18435;product=carbohydrate porin;protein_id=WP_012444645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3902772 3904514 . - . ID=gene-LNP58_RS18440;Name=LNP58_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18440;old_locus_tag=LNP58_18405 NZ_CP086372.1 Protein Homology CDS 3902772 3904514 . - 0 ID=cds-WP_069963855.1;Parent=gene-LNP58_RS18440;Dbxref=Genbank:WP_069963855.1;Name=WP_069963855.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993427.1;locus_tag=LNP58_RS18440;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_069963855.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3904673 3905629 . - . ID=gene-LNP58_RS18445;Name=LNP58_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18445;old_locus_tag=LNP58_18410 NZ_CP086372.1 Protein Homology CDS 3904673 3905629 . - 0 ID=cds-WP_011259401.1;Parent=gene-LNP58_RS18445;Dbxref=Genbank:WP_011259401.1;Name=WP_011259401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969646.1;locus_tag=LNP58_RS18445;product=1-phosphofructokinase family hexose kinase;protein_id=WP_011259401.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3905626 3908142 . - . ID=gene-LNP58_RS18450;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LNP58_RS18450;old_locus_tag=LNP58_18415 NZ_CP086372.1 Protein Homology CDS 3905626 3908142 . - 0 ID=cds-WP_059317461.1;Parent=gene-LNP58_RS18450;Dbxref=Genbank:WP_059317461.1;Name=WP_059317461.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051629.1;locus_tag=LNP58_RS18450;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_059317461.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3908303 3909298 . + . ID=gene-LNP58_RS18455;Name=LNP58_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18455;old_locus_tag=LNP58_18420 NZ_CP086372.1 Protein Homology CDS 3908303 3909298 . + 0 ID=cds-WP_011408798.1;Parent=gene-LNP58_RS18455;Dbxref=Genbank:WP_011408798.1;Name=WP_011408798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161385.1;locus_tag=LNP58_RS18455;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011408798.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3909440 3909907 . - . ID=gene-LNP58_RS18460;Name=LNP58_RS18460;end_range=3909907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18460;old_locus_tag=LNP58_18425;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3909440 3909907 . - 0 ID=cds-LNP58_RS18460;Parent=gene-LNP58_RS18460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3909907,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1;locus_tag=LNP58_RS18460;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3910005 3910970 . + . ID=gene-LNP58_RS18465;Name=LNP58_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18465;old_locus_tag=LNP58_18430 NZ_CP086372.1 Protein Homology CDS 3910005 3910970 . + 0 ID=cds-WP_228329608.1;Parent=gene-LNP58_RS18465;Dbxref=Genbank:WP_228329608.1;Name=WP_228329608.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS18465;product=IS1595-like element ISXo5 family transposase;protein_id=WP_228329608.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3910989 3911831 . - . ID=gene-LNP58_RS18470;Name=LNP58_RS18470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18470;old_locus_tag=LNP58_18435;partial=true;pseudo=true;start_range=.,3910989 NZ_CP086372.1 Protein Homology CDS 3910989 3911831 . - 0 ID=cds-LNP58_RS18470;Parent=gene-LNP58_RS18470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1;locus_tag=LNP58_RS18470;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,3910989;transl_table=11 NZ_CP086372.1 RefSeq gene 3911946 3915116 . - . ID=gene-LNP58_RS18475;Name=LNP58_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18475;old_locus_tag=LNP58_18440 NZ_CP086372.1 Protein Homology CDS 3911946 3915116 . - 0 ID=cds-WP_012444648.1;Parent=gene-LNP58_RS18475;Dbxref=Genbank:WP_012444648.1;Name=WP_012444648.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997967.1;locus_tag=LNP58_RS18475;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012444648.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3915129 3916433 . - . ID=gene-LNP58_RS18480;Name=LNP58_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18480;old_locus_tag=LNP58_18445 NZ_CP086372.1 Protein Homology CDS 3915129 3916433 . - 0 ID=cds-WP_012444649.1;Parent=gene-LNP58_RS18480;Dbxref=Genbank:WP_012444649.1;Name=WP_012444649.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171867.1;locus_tag=LNP58_RS18480;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012444649.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3916448 3917107 . - . ID=gene-LNP58_RS18485;Name=LNP58_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18485;old_locus_tag=LNP58_18450 NZ_CP086372.1 Protein Homology CDS 3916448 3917107 . - 0 ID=cds-WP_027703873.1;Parent=gene-LNP58_RS18485;Dbxref=Genbank:WP_027703873.1;Name=WP_027703873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917360.1;locus_tag=LNP58_RS18485;product=TetR/AcrR family transcriptional regulator;protein_id=WP_027703873.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3917385 3922409 . + . ID=gene-LNP58_RS18490;Name=LNP58_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18490;old_locus_tag=LNP58_18455 NZ_CP086372.1 Protein Homology CDS 3917385 3922409 . + 0 ID=cds-WP_069964847.1;Parent=gene-LNP58_RS18490;Dbxref=Genbank:WP_069964847.1;Name=WP_069964847.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051626.1;locus_tag=LNP58_RS18490;product=NAD-glutamate dehydrogenase;protein_id=WP_069964847.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3922858 3923838 . + . ID=gene-LNP58_RS18495;Name=LNP58_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18495;old_locus_tag=LNP58_18460 NZ_CP086372.1 Protein Homology CDS 3922858 3923838 . + 0 ID=cds-WP_012445831.1;Parent=gene-LNP58_RS18495;Dbxref=Genbank:WP_012445831.1;Name=WP_012445831.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=LNP58_RS18495;product=IS5 family transposase;protein_id=WP_012445831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3923963 3924949 . - . ID=gene-LNP58_RS18500;Name=LNP58_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18500;old_locus_tag=LNP58_18465 NZ_CP086372.1 Protein Homology CDS 3923963 3924949 . - 0 ID=cds-WP_027703772.1;Parent=gene-LNP58_RS18500;Dbxref=Genbank:WP_027703772.1;Name=WP_027703772.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259389.1;locus_tag=LNP58_RS18500;product=response regulator;protein_id=WP_027703772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3924983 3929077 . - . ID=gene-LNP58_RS18505;Name=LNP58_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18505;old_locus_tag=LNP58_18470 NZ_CP086372.1 Protein Homology CDS 3924983 3929077 . - 0 ID=cds-WP_075242283.1;Parent=gene-LNP58_RS18505;Dbxref=Genbank:WP_075242283.1;Name=WP_075242283.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962777.1;locus_tag=LNP58_RS18505;product=response regulator;protein_id=WP_075242283.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3929219 3930523 . - . ID=gene-LNP58_RS18510;Name=LNP58_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18510;old_locus_tag=LNP58_18475 NZ_CP086372.1 Protein Homology CDS 3929219 3930523 . - 0 ID=cds-WP_011408789.1;Parent=gene-LNP58_RS18510;Dbxref=Genbank:WP_011408789.1;Name=WP_011408789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408789.1;locus_tag=LNP58_RS18510;product=DUF445 family protein;protein_id=WP_011408789.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3930694 3931548 . - . ID=gene-LNP58_RS18515;Name=LNP58_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18515;old_locus_tag=LNP58_18480 NZ_CP086372.1 Protein Homology CDS 3930694 3931548 . - 0 ID=cds-WP_011408788.1;Parent=gene-LNP58_RS18515;Dbxref=Genbank:WP_011408788.1;Name=WP_011408788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915330.1;locus_tag=LNP58_RS18515;product=hypothetical protein;protein_id=WP_011408788.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3931715 3934852 . + . ID=gene-LNP58_RS18520;Name=LNP58_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18520;old_locus_tag=LNP58_18485 NZ_CP086372.1 Protein Homology CDS 3931715 3934852 . + 0 ID=cds-WP_011408787.1;Parent=gene-LNP58_RS18520;Dbxref=Genbank:WP_011408787.1;Name=WP_011408787.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376945.1;locus_tag=LNP58_RS18520;product=AAA domain-containing protein;protein_id=WP_011408787.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3934913 3936265 . - . ID=gene-LNP58_RS18525;Name=LNP58_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18525;old_locus_tag=LNP58_18490 NZ_CP086372.1 Protein Homology CDS 3934913 3936265 . - 0 ID=cds-WP_011259384.1;Parent=gene-LNP58_RS18525;Dbxref=Genbank:WP_011259384.1;Name=WP_011259384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259384.1;locus_tag=LNP58_RS18525;product=aspartate aminotransferase family protein;protein_id=WP_011259384.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3936795 3938519 . + . ID=gene-LNP58_RS18530;Name=LNP58_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18530;old_locus_tag=LNP58_18495 NZ_CP086372.1 Protein Homology CDS 3936795 3938519 . + 0 ID=cds-WP_011408786.1;Parent=gene-LNP58_RS18530;Dbxref=Genbank:WP_011408786.1;Name=WP_011408786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915324.1;locus_tag=LNP58_RS18530;product=OFA family MFS transporter;protein_id=WP_011408786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3938526 3939371 . + . ID=gene-LNP58_RS18535;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LNP58_RS18535;old_locus_tag=LNP58_18500 NZ_CP086372.1 Protein Homology CDS 3938526 3939371 . + 0 ID=cds-WP_011259382.1;Parent=gene-LNP58_RS18535;Dbxref=Genbank:WP_011259382.1;Name=WP_011259382.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156198.1;locus_tag=LNP58_RS18535;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_011259382.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3939368 3941716 . + . ID=gene-LNP58_RS18540;Name=LNP58_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18540;old_locus_tag=LNP58_18505 NZ_CP086372.1 Protein Homology CDS 3939368 3941716 . + 0 ID=cds-WP_011259381.1;Parent=gene-LNP58_RS18540;Dbxref=Genbank:WP_011259381.1;Name=WP_011259381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915320.1;locus_tag=LNP58_RS18540;product=FdhF/YdeP family oxidoreductase;protein_id=WP_011259381.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3941706 3941984 . + . ID=gene-LNP58_RS18545;Name=LNP58_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18545;old_locus_tag=LNP58_18510 NZ_CP086372.1 Protein Homology CDS 3941706 3941984 . + 0 ID=cds-WP_011408785.1;Parent=gene-LNP58_RS18545;Dbxref=Genbank:WP_011408785.1;Name=WP_011408785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301208.1;locus_tag=LNP58_RS18545;product=hypothetical protein;protein_id=WP_011408785.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3942290 3943570 . + . ID=gene-LNP58_RS18550;Name=LNP58_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18550;old_locus_tag=LNP58_18515 NZ_CP086372.1 Protein Homology CDS 3942290 3943570 . + 0 ID=cds-WP_011408784.1;Parent=gene-LNP58_RS18550;Dbxref=Genbank:WP_011408784.1;Name=WP_011408784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301209.1;locus_tag=LNP58_RS18550;product=MFS transporter;protein_id=WP_011408784.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3943878 3945176 . - . ID=gene-LNP58_RS18555;Name=LNP58_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18555;old_locus_tag=LNP58_18520 NZ_CP086372.1 Protein Homology CDS 3943878 3945176 . - 0 ID=cds-WP_011259379.1;Parent=gene-LNP58_RS18555;Dbxref=Genbank:WP_011259379.1;Name=WP_011259379.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112538.1;locus_tag=LNP58_RS18555;product=diguanylate cyclase;protein_id=WP_011259379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3945259 3946578 . - . ID=gene-LNP58_RS18560;Name=LNP58_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18560;old_locus_tag=LNP58_18525 NZ_CP086372.1 Protein Homology CDS 3945259 3946578 . - 0 ID=cds-WP_173340387.1;Parent=gene-LNP58_RS18560;Dbxref=Genbank:WP_173340387.1;Name=WP_173340387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851516.1;locus_tag=LNP58_RS18560;product=FAD-binding oxidoreductase;protein_id=WP_173340387.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3946575 3947954 . - . ID=gene-LNP58_RS18565;Name=LNP58_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18565;old_locus_tag=LNP58_18530 NZ_CP086372.1 Protein Homology CDS 3946575 3947954 . - 0 ID=cds-WP_011259377.1;Parent=gene-LNP58_RS18565;Dbxref=Genbank:WP_011259377.1;Name=WP_011259377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347795.1;locus_tag=LNP58_RS18565;product=glutamine synthetase family protein;protein_id=WP_011259377.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3948099 3948855 . + . ID=gene-LNP58_RS18570;Name=LNP58_RS18570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18570;old_locus_tag=LNP58_18535;pseudo=true NZ_CP086372.1 Protein Homology CDS 3948099 3948855 . + 0 ID=cds-LNP58_RS18570;Parent=gene-LNP58_RS18570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488313.1;locus_tag=LNP58_RS18570;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3948862 3950247 . + . ID=gene-LNP58_RS18575;Name=LNP58_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18575;old_locus_tag=LNP58_18540 NZ_CP086372.1 Protein Homology CDS 3948862 3950247 . + 0 ID=cds-WP_011408781.1;Parent=gene-LNP58_RS18575;Dbxref=Genbank:WP_011408781.1;Name=WP_011408781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508026.1;locus_tag=LNP58_RS18575;product=glutamine synthetase family protein;protein_id=WP_011408781.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3950551 3951869 . - . ID=gene-LNP58_RS18580;Name=LNP58_RS18580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18580;old_locus_tag=LNP58_18545;pseudo=true NZ_CP086372.1 Protein Homology CDS 3950551 3951869 . - 0 ID=cds-LNP58_RS18580;Parent=gene-LNP58_RS18580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS18580;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3952376 3953578 . + . ID=gene-LNP58_RS18585;Name=LNP58_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18585;old_locus_tag=LNP58_18550 NZ_CP086372.1 Protein Homology CDS 3952376 3953578 . + 0 ID=cds-WP_011408779.1;Parent=gene-LNP58_RS18585;Dbxref=Genbank:WP_011408779.1;Name=WP_011408779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159217.1;locus_tag=LNP58_RS18585;product=HlyD family secretion protein;protein_id=WP_011408779.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3953575 3955161 . + . ID=gene-LNP58_RS18590;Name=LNP58_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18590;old_locus_tag=LNP58_18555 NZ_CP086372.1 Protein Homology CDS 3953575 3955161 . + 0 ID=cds-WP_011408778.1;Parent=gene-LNP58_RS18590;Dbxref=Genbank:WP_011408778.1;Name=WP_011408778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302223.1;locus_tag=LNP58_RS18590;product=MDR family MFS transporter;protein_id=WP_011408778.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3955166 3956659 . + . ID=gene-LNP58_RS18595;Name=LNP58_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18595;old_locus_tag=LNP58_18560 NZ_CP086372.1 Protein Homology CDS 3955166 3956659 . + 0 ID=cds-WP_011408777.1;Parent=gene-LNP58_RS18595;Dbxref=Genbank:WP_011408777.1;Name=WP_011408777.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156183.1;locus_tag=LNP58_RS18595;product=efflux transporter outer membrane subunit;protein_id=WP_011408777.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3956805 3958052 . + . ID=gene-LNP58_RS18600;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=LNP58_RS18600;old_locus_tag=LNP58_18565 NZ_CP086372.1 Protein Homology CDS 3956805 3958052 . + 0 ID=cds-WP_075240820.1;Parent=gene-LNP58_RS18600;Dbxref=Genbank:WP_075240820.1;Name=WP_075240820.1;Ontology_term=GO:0015846,GO:0005524,GO:0015417,GO:0009898,GO:0055052;gbkey=CDS;gene=potA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408776.1;locus_tag=LNP58_RS18600;product=polyamine ABC transporter ATP-binding protein;protein_id=WP_075240820.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3957934 3958350 . + . ID=gene-LNP58_RS18605;Name=LNP58_RS18605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18605;old_locus_tag=LNP58_18570;partial=true;pseudo=true;start_range=.,3957934 NZ_CP086372.1 Protein Homology CDS 3957934 3958350 . + 0 ID=cds-LNP58_RS18605;Parent=gene-LNP58_RS18605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849508.1;locus_tag=LNP58_RS18605;partial=true;product=ABC transporter permease subunit;pseudo=true;start_range=.,3957934;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3958347 3959196 . + . ID=gene-LNP58_RS18610;Name=LNP58_RS18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18610;old_locus_tag=LNP58_18575;pseudo=true NZ_CP086372.1 Protein Homology CDS 3958347 3959196 . + 0 ID=cds-LNP58_RS18610;Parent=gene-LNP58_RS18610;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302219.1;locus_tag=LNP58_RS18610;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3959352 3959933 . - . ID=gene-LNP58_RS18615;Name=LNP58_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18615;old_locus_tag=LNP58_18580 NZ_CP086372.1 GeneMarkS-2+ CDS 3959352 3959933 . - 0 ID=cds-WP_228329609.1;Parent=gene-LNP58_RS18615;Dbxref=Genbank:WP_228329609.1;Name=WP_228329609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18615;product=hypothetical protein;protein_id=WP_228329609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3960017 3961381 . + . ID=gene-LNP58_RS18620;Name=LNP58_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18620;old_locus_tag=LNP58_18585 NZ_CP086372.1 Protein Homology CDS 3960017 3961381 . + 0 ID=cds-WP_011408772.1;Parent=gene-LNP58_RS18620;Dbxref=Genbank:WP_011408772.1;Name=WP_011408772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488331.1;locus_tag=LNP58_RS18620;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011408772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3961533 3962534 . - . ID=gene-LNP58_RS18625;Name=LNP58_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18625;old_locus_tag=LNP58_18590 NZ_CP086372.1 Protein Homology CDS 3961533 3962534 . - 0 ID=cds-WP_011259367.1;Parent=gene-LNP58_RS18625;Dbxref=Genbank:WP_011259367.1;Name=WP_011259367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488333.1;locus_tag=LNP58_RS18625;product=magnesium and cobalt transport protein CorA;protein_id=WP_011259367.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3962550 3963830 . - . ID=gene-LNP58_RS18630;Name=LNP58_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18630;old_locus_tag=LNP58_18595 NZ_CP086372.1 Protein Homology CDS 3962550 3963830 . - 0 ID=cds-WP_011259366.1;Parent=gene-LNP58_RS18630;Dbxref=Genbank:WP_011259366.1;Name=WP_011259366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382454.1;locus_tag=LNP58_RS18630;product=DUF4105 domain-containing protein;protein_id=WP_011259366.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3963827 3964705 . - . ID=gene-LNP58_RS18635;Name=LNP58_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18635;old_locus_tag=LNP58_18600 NZ_CP086372.1 Protein Homology CDS 3963827 3964705 . - 0 ID=cds-WP_011408770.1;Parent=gene-LNP58_RS18635;Dbxref=Genbank:WP_011408770.1;Name=WP_011408770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488337.1;locus_tag=LNP58_RS18635;product=CBS domain-containing protein;protein_id=WP_011408770.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3964800 3965318 . - . ID=gene-LNP58_RS18640;Name=LNP58_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18640;old_locus_tag=LNP58_18605 NZ_CP086372.1 Protein Homology CDS 3964800 3965318 . - 0 ID=cds-WP_011408769.1;Parent=gene-LNP58_RS18640;Dbxref=Genbank:WP_011408769.1;Name=WP_011408769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347782.1;locus_tag=LNP58_RS18640;product=hypothetical protein;protein_id=WP_011408769.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3965318 3965803 . - . ID=gene-LNP58_RS18645;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LNP58_RS18645;old_locus_tag=LNP58_18610 NZ_CP086372.1 Protein Homology CDS 3965318 3965803 . - 0 ID=cds-WP_011259363.1;Parent=gene-LNP58_RS18645;Dbxref=Genbank:WP_011259363.1;Name=WP_011259363.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901623.1;locus_tag=LNP58_RS18645;product=rRNA maturation RNase YbeY;protein_id=WP_011259363.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3965858 3966520 . - . ID=gene-LNP58_RS18650;Name=LNP58_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18650;old_locus_tag=LNP58_18615 NZ_CP086372.1 Protein Homology CDS 3965858 3966520 . - 0 ID=cds-WP_011259362.1;Parent=gene-LNP58_RS18650;Dbxref=Genbank:WP_011259362.1;Name=WP_011259362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051605.1;locus_tag=LNP58_RS18650;product=hypothetical protein;protein_id=WP_011259362.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3966932 3967918 . - . ID=gene-LNP58_RS18655;Name=LNP58_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18655;old_locus_tag=LNP58_18620 NZ_CP086372.1 Protein Homology CDS 3966932 3967918 . - 0 ID=cds-WP_011408767.1;Parent=gene-LNP58_RS18655;Dbxref=Genbank:WP_011408767.1;Name=WP_011408767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408767.1;locus_tag=LNP58_RS18655;product=PhoH family protein;protein_id=WP_011408767.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3968091 3968366 . + . ID=gene-LNP58_RS18660;Name=LNP58_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18660;old_locus_tag=LNP58_18625 NZ_CP086372.1 GeneMarkS-2+ CDS 3968091 3968366 . + 0 ID=cds-WP_133260558.1;Parent=gene-LNP58_RS18660;Dbxref=Genbank:WP_133260558.1;Name=WP_133260558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18660;product=hypothetical protein;protein_id=WP_133260558.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3968342 3969796 . - . ID=gene-LNP58_RS18665;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LNP58_RS18665;old_locus_tag=LNP58_18630 NZ_CP086372.1 Protein Homology CDS 3968342 3969796 . - 0 ID=cds-WP_011408766.1;Parent=gene-LNP58_RS18665;Dbxref=Genbank:WP_011408766.1;Name=WP_011408766.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182646.1;locus_tag=LNP58_RS18665;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_011408766.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3969835 3970471 . - . ID=gene-LNP58_RS18670;Name=LNP58_RS18670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18670;old_locus_tag=LNP58_18635;pseudo=true NZ_CP086372.1 Protein Homology CDS 3969835 3970471 . - 0 ID=cds-LNP58_RS18670;Parent=gene-LNP58_RS18670;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382438.1;locus_tag=LNP58_RS18670;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3970605 3971524 . + . ID=gene-LNP58_RS18675;Name=LNP58_RS18675;end_range=3971524,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18675;old_locus_tag=LNP58_18640;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 3970605 3971524 . + 0 ID=cds-LNP58_RS18675;Parent=gene-LNP58_RS18675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3971524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156170.1;locus_tag=LNP58_RS18675;partial=true;product=WYL domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 3971549 3971623 . - . ID=gene-LNP58_RS18680;Name=LNP58_RS18680;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18680;old_locus_tag=LNP58_18645 NZ_CP086372.1 cmsearch ncRNA 3971549 3971623 . - . ID=rna-LNP58_RS18680;Parent=gene-LNP58_RS18680;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18680;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3971549 3971623 . - . ID=exon-LNP58_RS18680-1;Parent=rna-LNP58_RS18680;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18680;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3971737 3972723 . + . ID=gene-LNP58_RS18685;Name=LNP58_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18685;old_locus_tag=LNP58_18650 NZ_CP086372.1 Protein Homology CDS 3971737 3972723 . + 0 ID=cds-WP_012444681.1;Parent=gene-LNP58_RS18685;Dbxref=Genbank:WP_012444681.1;Name=WP_012444681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171389.1;locus_tag=LNP58_RS18685;product=lytic transglycosylase domain-containing protein;protein_id=WP_012444681.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3973253 3973897 . + . ID=gene-LNP58_RS18690;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LNP58_RS18690;old_locus_tag=LNP58_18655 NZ_CP086372.1 Protein Homology CDS 3973253 3973897 . + 0 ID=cds-WP_011259356.1;Parent=gene-LNP58_RS18690;Dbxref=Genbank:WP_011259356.1;Name=WP_011259356.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382428.1;locus_tag=LNP58_RS18690;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_011259356.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3973897 3975156 . + . ID=gene-LNP58_RS18695;Name=LNP58_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18695;old_locus_tag=LNP58_18660 NZ_CP086372.1 Protein Homology CDS 3973897 3975156 . + 0 ID=cds-WP_011259355.1;Parent=gene-LNP58_RS18695;Dbxref=Genbank:WP_011259355.1;Name=WP_011259355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965674.1;locus_tag=LNP58_RS18695;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_011259355.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3975149 3975907 . + . ID=gene-LNP58_RS18700;Name=LNP58_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18700;old_locus_tag=LNP58_18665 NZ_CP086372.1 Protein Homology CDS 3975149 3975907 . + 0 ID=cds-WP_011259354.1;Parent=gene-LNP58_RS18700;Dbxref=Genbank:WP_011259354.1;Name=WP_011259354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113706.1;locus_tag=LNP58_RS18700;product=cytochrome c1;protein_id=WP_011259354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3976301 3976936 . + . ID=gene-LNP58_RS18705;Name=LNP58_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18705;old_locus_tag=LNP58_18670 NZ_CP086372.1 Protein Homology CDS 3976301 3976936 . + 0 ID=cds-WP_011259353.1;Parent=gene-LNP58_RS18705;Dbxref=Genbank:WP_011259353.1;Name=WP_011259353.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810483.1;locus_tag=LNP58_RS18705;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_011259353.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3977015 3977455 . + . ID=gene-LNP58_RS18710;Name=LNP58_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18710;old_locus_tag=LNP58_18675 NZ_CP086372.1 Protein Homology CDS 3977015 3977455 . + 0 ID=cds-WP_011259352.1;Parent=gene-LNP58_RS18710;Dbxref=Genbank:WP_011259352.1;Name=WP_011259352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901612.1;locus_tag=LNP58_RS18710;product=ClpXP protease specificity-enhancing factor;protein_id=WP_011259352.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3977488 3977814 . + . ID=gene-LNP58_RS18715;Name=LNP58_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18715;old_locus_tag=LNP58_18680 NZ_CP086372.1 Protein Homology CDS 3977488 3977814 . + 0 ID=cds-WP_011408764.1;Parent=gene-LNP58_RS18715;Dbxref=Genbank:WP_011408764.1;Name=WP_011408764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503015.1;locus_tag=LNP58_RS18715;product=hypothetical protein;protein_id=WP_011408764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3978025 3978369 . - . ID=gene-LNP58_RS18720;Name=LNP58_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18720;old_locus_tag=LNP58_18685 NZ_CP086372.1 Protein Homology CDS 3978025 3978369 . - 0 ID=cds-WP_042465594.1;Parent=gene-LNP58_RS18720;Dbxref=Genbank:WP_042465594.1;Name=WP_042465594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382418.1;locus_tag=LNP58_RS18720;product=DUF3301 domain-containing protein;protein_id=WP_042465594.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3978596 3980431 . + . ID=gene-LNP58_RS18725;Name=LNP58_RS18725;end_range=3980431,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18725;old_locus_tag=LNP58_18690;partial=true;pseudo=true;start_range=.,3978596 NZ_CP086372.1 Protein Homology CDS 3978596 3980431 . + 0 ID=cds-LNP58_RS18725;Parent=gene-LNP58_RS18725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3980431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090390.1;locus_tag=LNP58_RS18725;partial=true;product=helicase-related protein;pseudo=true;start_range=.,3978596;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3980663 3982275 . + . ID=gene-LNP58_RS18730;Name=LNP58_RS18730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18730;old_locus_tag=LNP58_18695;partial=true;pseudo=true;start_range=.,3980663 NZ_CP086372.1 Protein Homology CDS 3980663 3982275 . + 0 ID=cds-LNP58_RS18730;Parent=gene-LNP58_RS18730;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463325.1;locus_tag=LNP58_RS18730;partial=true;product=ATP-dependent DNA helicase;pseudo=true;start_range=.,3980663;transl_table=11 NZ_CP086372.1 RefSeq gene 3982227 3982784 . - . ID=gene-LNP58_RS18735;Name=LNP58_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18735;old_locus_tag=LNP58_18700 NZ_CP086372.1 Protein Homology CDS 3982227 3982784 . - 0 ID=cds-WP_011259349.1;Parent=gene-LNP58_RS18735;Dbxref=Genbank:WP_011259349.1;Name=WP_011259349.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944546.1;locus_tag=LNP58_RS18735;product=DNA-3-methyladenine glycosylase;protein_id=WP_011259349.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3982934 3983899 . - . ID=gene-LNP58_RS18740;Name=LNP58_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18740;old_locus_tag=LNP58_18705 NZ_CP086372.1 Protein Homology CDS 3982934 3983899 . - 0 ID=cds-WP_109181928.1-4;Parent=gene-LNP58_RS18740;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS18740;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3984480 3985664 . + . ID=gene-LNP58_RS18745;Name=LNP58_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18745;old_locus_tag=LNP58_18710 NZ_CP086372.1 Protein Homology CDS 3984480 3985664 . + 0 ID=cds-WP_011408397.1;Parent=gene-LNP58_RS18745;Dbxref=Genbank:WP_011408397.1;Name=WP_011408397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS18745;product=IS256-like element IS1113 family transposase;protein_id=WP_011408397.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3986570 3986914 . + . ID=gene-LNP58_RS18750;Name=LNP58_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18750;old_locus_tag=LNP58_18715 NZ_CP086372.1 GeneMarkS-2+ CDS 3986570 3986914 . + 0 ID=cds-WP_199285675.1;Parent=gene-LNP58_RS18750;Dbxref=Genbank:WP_199285675.1;Name=WP_199285675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18750;product=hypothetical protein;protein_id=WP_199285675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3987110 3987388 . + . ID=gene-LNP58_RS18755;Name=LNP58_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18755;old_locus_tag=LNP58_18720 NZ_CP086372.1 Protein Homology CDS 3987110 3987388 . + 0 ID=cds-WP_011408759.1;Parent=gene-LNP58_RS18755;Dbxref=Genbank:WP_011408759.1;Name=WP_011408759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408759.1;locus_tag=LNP58_RS18755;product=CopG family ribbon-helix-helix protein;protein_id=WP_011408759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3987415 3987666 . + . ID=gene-LNP58_RS18760;Name=LNP58_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18760;old_locus_tag=LNP58_18725 NZ_CP086372.1 Protein Homology CDS 3987415 3987666 . + 0 ID=cds-WP_229001948.1;Parent=gene-LNP58_RS18760;Dbxref=Genbank:WP_229001948.1;Name=WP_229001948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=LNP58_RS18760;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_229001948.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3987927 3988124 . + . ID=gene-LNP58_RS18765;Name=LNP58_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18765;old_locus_tag=LNP58_18730 NZ_CP086372.1 Protein Homology CDS 3987927 3988124 . + 0 ID=cds-WP_153296741.1;Parent=gene-LNP58_RS18765;Dbxref=Genbank:WP_153296741.1;Name=WP_153296741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401351.1;locus_tag=LNP58_RS18765;product=hypothetical protein;protein_id=WP_153296741.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3988193 3988447 . + . ID=gene-LNP58_RS18770;Name=LNP58_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18770;old_locus_tag=LNP58_18735 NZ_CP086372.1 GeneMarkS-2+ CDS 3988193 3988447 . + 0 ID=cds-WP_223293127.1;Parent=gene-LNP58_RS18770;Dbxref=Genbank:WP_223293127.1;Name=WP_223293127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS18770;product=hypothetical protein;protein_id=WP_223293127.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3988664 3988783 . + . ID=gene-LNP58_RS18775;Name=LNP58_RS18775;end_range=3988783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18775;old_locus_tag=LNP58_18740;partial=true;pseudo=true;start_range=.,3988664 NZ_CP086372.1 Protein Homology CDS 3988664 3988783 . + 0 ID=cds-LNP58_RS18775;Parent=gene-LNP58_RS18775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3988783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=LNP58_RS18775;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3988664;transl_table=11 NZ_CP086372.1 RefSeq gene 3988752 3988880 . + . ID=gene-LNP58_RS23440;Name=LNP58_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23440 NZ_CP086372.1 GeneMarkS-2+ CDS 3988752 3988880 . + 0 ID=cds-WP_012444694.1;Parent=gene-LNP58_RS23440;Dbxref=Genbank:WP_012444694.1;Name=WP_012444694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23440;product=hypothetical protein;protein_id=WP_012444694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3989143 3989218 . - . ID=gene-LNP58_RS18780;Name=LNP58_RS18780;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS18780;old_locus_tag=LNP58_18745 NZ_CP086372.1 tRNAscan-SE tRNA 3989143 3989218 . - . ID=rna-LNP58_RS18780;Parent=gene-LNP58_RS18780;anticodon=(pos:complement(3989183..3989185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS18780;product=tRNA-Ala NZ_CP086372.1 tRNAscan-SE exon 3989143 3989218 . - . ID=exon-LNP58_RS18780-1;Parent=rna-LNP58_RS18780;anticodon=(pos:complement(3989183..3989185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS18780;product=tRNA-Ala NZ_CP086372.1 RefSeq gene 3989311 3989712 . - . ID=gene-LNP58_RS18785;Name=LNP58_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18785;old_locus_tag=LNP58_18750 NZ_CP086372.1 Protein Homology CDS 3989311 3989712 . - 0 ID=cds-WP_011259345.1;Parent=gene-LNP58_RS18785;Dbxref=Genbank:WP_011259345.1;Name=WP_011259345.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485983.1;locus_tag=LNP58_RS18785;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_011259345.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3989934 3990110 . + . ID=gene-LNP58_RS18790;Name=LNP58_RS18790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18790;old_locus_tag=LNP58_18755;pseudo=true NZ_CP086372.1 Protein Homology CDS 3989934 3990110 . + 0 ID=cds-LNP58_RS18790;Parent=gene-LNP58_RS18790;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503050.1;locus_tag=LNP58_RS18790;product=DUF3606 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 3990392 3990729 . + . ID=gene-LNP58_RS18795;Name=LNP58_RS18795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS18795;old_locus_tag=LNP58_18760;partial=true;pseudo=true;start_range=.,3990392 NZ_CP086372.1 Protein Homology CDS 3990392 3990729 . + 0 ID=cds-LNP58_RS18795;Parent=gene-LNP58_RS18795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159207.1;locus_tag=LNP58_RS18795;partial=true;product=ATP-dependent DNA ligase;pseudo=true;start_range=.,3990392;transl_table=11 NZ_CP086372.1 RefSeq gene 3990805 3991896 . - . ID=gene-LNP58_RS18800;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LNP58_RS18800;old_locus_tag=LNP58_18765 NZ_CP086372.1 Protein Homology CDS 3990805 3991896 . - 0 ID=cds-WP_041182166.1;Parent=gene-LNP58_RS18800;Dbxref=Genbank:WP_041182166.1;Name=WP_041182166.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171603.1;locus_tag=LNP58_RS18800;product=ribonuclease D;protein_id=WP_041182166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3992104 3992179 . + . ID=gene-LNP58_RS18805;Name=LNP58_RS18805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18805;old_locus_tag=LNP58_18770 NZ_CP086372.1 cmsearch ncRNA 3992104 3992179 . + . ID=rna-LNP58_RS18805;Parent=gene-LNP58_RS18805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18805;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 3992104 3992179 . + . ID=exon-LNP58_RS18805-1;Parent=rna-LNP58_RS18805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18805;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 3992168 3994003 . + . ID=gene-LNP58_RS18810;Name=LNP58_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18810;old_locus_tag=LNP58_18775 NZ_CP086372.1 Protein Homology CDS 3992168 3994003 . + 0 ID=cds-WP_041182165.1;Parent=gene-LNP58_RS18810;Dbxref=Genbank:WP_041182165.1;Name=WP_041182165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112352.1;locus_tag=LNP58_RS18810;product=formylglycine-generating enzyme family protein;protein_id=WP_041182165.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3994320 3995067 . + . ID=gene-LNP58_RS18815;Name=LNP58_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18815;old_locus_tag=LNP58_18780 NZ_CP086372.1 Protein Homology CDS 3994320 3994529 . + 0 ID=cds-WP_200898179.1;Parent=gene-LNP58_RS18815;Dbxref=Genbank:WP_200898179.1;Name=WP_200898179.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=LNP58_RS18815;product=IS5 family transposase;protein_id=WP_200898179.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3994531 3995067 . + 0 ID=cds-WP_200898179.1;Parent=gene-LNP58_RS18815;Dbxref=Genbank:WP_200898179.1;Name=WP_200898179.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=LNP58_RS18815;product=IS5 family transposase;protein_id=WP_200898179.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3995284 3996546 . + . ID=gene-LNP58_RS18820;Name=LNP58_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18820;old_locus_tag=LNP58_18785 NZ_CP086372.1 Protein Homology CDS 3995284 3996546 . + 0 ID=cds-WP_069959887.1;Parent=gene-LNP58_RS18820;Dbxref=Genbank:WP_069959887.1;Name=WP_069959887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503060.1;locus_tag=LNP58_RS18820;product=virulence factor;protein_id=WP_069959887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3996842 3998179 . - . ID=gene-LNP58_RS18825;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LNP58_RS18825;old_locus_tag=LNP58_18790 NZ_CP086372.1 Protein Homology CDS 3996842 3998179 . - 0 ID=cds-WP_041182164.1;Parent=gene-LNP58_RS18825;Dbxref=Genbank:WP_041182164.1;Name=WP_041182164.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372660.1;locus_tag=LNP58_RS18825;product=exodeoxyribonuclease VII large subunit;protein_id=WP_041182164.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3998263 3999026 . + . ID=gene-LNP58_RS18830;Name=LNP58_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18830;old_locus_tag=LNP58_18795 NZ_CP086372.1 Protein Homology CDS 3998263 3998578 . + 0 ID=cds-WP_094187715.1-10;Parent=gene-LNP58_RS18830;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS18830;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 3998578 3999026 . + 2 ID=cds-WP_094187715.1-10;Parent=gene-LNP58_RS18830;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS18830;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 3999141 4000208 . - . ID=gene-LNP58_RS18835;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LNP58_RS18835;old_locus_tag=LNP58_18800 NZ_CP086372.1 Protein Homology CDS 3999141 4000208 . - 0 ID=cds-WP_069959886.1;Parent=gene-LNP58_RS18835;Dbxref=Genbank:WP_069959886.1;Name=WP_069959886.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051562.1;locus_tag=LNP58_RS18835;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_069959886.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4000233 4001720 . + . ID=gene-LNP58_RS18840;Name=LNP58_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18840;old_locus_tag=LNP58_18805 NZ_CP086372.1 Protein Homology CDS 4000233 4001720 . + 0 ID=cds-WP_011259337.1;Parent=gene-LNP58_RS18840;Dbxref=Genbank:WP_011259337.1;Name=WP_011259337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965703.1;locus_tag=LNP58_RS18840;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_011259337.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4001717 4002217 . + . ID=gene-LNP58_RS18845;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LNP58_RS18845;old_locus_tag=LNP58_18810 NZ_CP086372.1 Protein Homology CDS 4001717 4002217 . + 0 ID=cds-WP_012444701.1;Parent=gene-LNP58_RS18845;Dbxref=Genbank:WP_012444701.1;Name=WP_012444701.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156148.1;locus_tag=LNP58_RS18845;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_012444701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4002288 4004003 . + . ID=gene-LNP58_RS18850;Name=LNP58_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18850;old_locus_tag=LNP58_18815 NZ_CP086372.1 Protein Homology CDS 4002288 4004003 . + 0 ID=cds-WP_027703275.1;Parent=gene-LNP58_RS18850;Dbxref=Genbank:WP_027703275.1;Name=WP_027703275.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159951.1;locus_tag=LNP58_RS18850;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_027703275.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4004141 4006018 . + . ID=gene-LNP58_RS18855;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LNP58_RS18855;old_locus_tag=LNP58_18820 NZ_CP086372.1 Protein Homology CDS 4004141 4006018 . + 0 ID=cds-WP_011259334.1;Parent=gene-LNP58_RS18855;Dbxref=Genbank:WP_011259334.1;Name=WP_011259334.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486008.1;locus_tag=LNP58_RS18855;product=DNA mismatch repair endonuclease MutL;protein_id=WP_011259334.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4006018 4006959 . + . ID=gene-LNP58_RS18860;Name=LNP58_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18860;old_locus_tag=LNP58_18825 NZ_CP086372.1 Protein Homology CDS 4006018 4006959 . + 0 ID=cds-WP_011408750.1;Parent=gene-LNP58_RS18860;Dbxref=Genbank:WP_011408750.1;Name=WP_011408750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913042.1;locus_tag=LNP58_RS18860;product=DUF1684 domain-containing protein;protein_id=WP_011408750.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4006993 4007964 . + . ID=gene-LNP58_RS18865;Name=LNP58_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18865;old_locus_tag=LNP58_18830 NZ_CP086372.1 Protein Homology CDS 4006993 4007964 . + 0 ID=cds-WP_011408749.1;Parent=gene-LNP58_RS18865;Dbxref=Genbank:WP_011408749.1;Name=WP_011408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116190.1;locus_tag=LNP58_RS18865;product=TraB/GumN family protein;protein_id=WP_011408749.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4008138 4008713 . - . ID=gene-LNP58_RS18870;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=LNP58_RS18870;old_locus_tag=LNP58_18835 NZ_CP086372.1 Protein Homology CDS 4008138 4008713 . - 0 ID=cds-WP_011259331.1;Parent=gene-LNP58_RS18870;Dbxref=Genbank:WP_011259331.1;Name=WP_011259331.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486016.1;locus_tag=LNP58_RS18870;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_011259331.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4008873 4009613 . - . ID=gene-LNP58_RS18875;Name=LNP58_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18875;old_locus_tag=LNP58_18840 NZ_CP086372.1 Protein Homology CDS 4008873 4009613 . - 0 ID=cds-WP_011408747.1;Parent=gene-LNP58_RS18875;Dbxref=Genbank:WP_011408747.1;Name=WP_011408747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090372.1;locus_tag=LNP58_RS18875;product=beta-ketoacyl-ACP reductase;protein_id=WP_011408747.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4009701 4010600 . - . ID=gene-LNP58_RS18880;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LNP58_RS18880;old_locus_tag=LNP58_18845 NZ_CP086372.1 Protein Homology CDS 4009701 4010600 . - 0 ID=cds-WP_011259329.1;Parent=gene-LNP58_RS18880;Dbxref=Genbank:WP_011259329.1;Name=WP_011259329.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301023.1;locus_tag=LNP58_RS18880;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_011259329.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4010698 4011576 . + . ID=gene-LNP58_RS18885;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LNP58_RS18885;old_locus_tag=LNP58_18850 NZ_CP086372.1 Protein Homology CDS 4010698 4011576 . + 0 ID=cds-WP_011259328.1;Parent=gene-LNP58_RS18885;Dbxref=Genbank:WP_011259328.1;Name=WP_011259328.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037436.1;locus_tag=LNP58_RS18885;product=protease HtpX;protein_id=WP_011259328.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4011676 4013745 . - . ID=gene-LNP58_RS18890;Name=LNP58_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18890;old_locus_tag=LNP58_18855 NZ_CP086372.1 Protein Homology CDS 4011676 4013745 . - 0 ID=cds-WP_012444707.1;Parent=gene-LNP58_RS18890;Dbxref=Genbank:WP_012444707.1;Name=WP_012444707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037435.1;locus_tag=LNP58_RS18890;product=EAL domain-containing protein;protein_id=WP_012444707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4013969 4015150 . - . ID=gene-LNP58_RS18895;Name=LNP58_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18895;old_locus_tag=LNP58_18860 NZ_CP086372.1 Protein Homology CDS 4013969 4015150 . - 0 ID=cds-WP_011259326.1;Parent=gene-LNP58_RS18895;Dbxref=Genbank:WP_011259326.1;Name=WP_011259326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923170.1;locus_tag=LNP58_RS18895;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011259326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4015147 4015695 . - . ID=gene-LNP58_RS18900;Name=LNP58_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18900;old_locus_tag=LNP58_18865 NZ_CP086372.1 Protein Homology CDS 4015147 4015695 . - 0 ID=cds-WP_011259325.1;Parent=gene-LNP58_RS18900;Dbxref=Genbank:WP_011259325.1;Name=WP_011259325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503075.1;locus_tag=LNP58_RS18900;product=YaeQ family protein;protein_id=WP_011259325.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4015766 4016251 . - . ID=gene-LNP58_RS18905;Name=LNP58_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18905;old_locus_tag=LNP58_18870 NZ_CP086372.1 Protein Homology CDS 4015766 4016251 . - 0 ID=cds-WP_011408745.1;Parent=gene-LNP58_RS18905;Dbxref=Genbank:WP_011408745.1;Name=WP_011408745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408745.1;locus_tag=LNP58_RS18905;product=YaiI/YqxD family protein;protein_id=WP_011408745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4016533 4016730 . + . ID=gene-LNP58_RS18910;Name=LNP58_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18910;old_locus_tag=LNP58_18875 NZ_CP086372.1 Protein Homology CDS 4016533 4016730 . + 0 ID=cds-WP_082925804.1;Parent=gene-LNP58_RS18910;Dbxref=Genbank:WP_082925804.1;Name=WP_082925804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156138.1;locus_tag=LNP58_RS18910;product=cold-shock protein;protein_id=WP_082925804.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4016901 4017599 . + . ID=gene-LNP58_RS18915;Name=LNP58_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18915;old_locus_tag=LNP58_18880 NZ_CP086372.1 Protein Homology CDS 4016901 4017599 . + 0 ID=cds-WP_012444709.1;Parent=gene-LNP58_RS18915;Dbxref=Genbank:WP_012444709.1;Name=WP_012444709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156137.1;locus_tag=LNP58_RS18915;product=glutathione S-transferase;protein_id=WP_012444709.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4017800 4018675 . - . ID=gene-LNP58_RS18920;Name=LNP58_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18920;old_locus_tag=LNP58_18885 NZ_CP086372.1 Protein Homology CDS 4017800 4018675 . - 0 ID=cds-WP_011408742.1;Parent=gene-LNP58_RS18920;Dbxref=Genbank:WP_011408742.1;Name=WP_011408742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116192.1;locus_tag=LNP58_RS18920;product=alpha/beta hydrolase;protein_id=WP_011408742.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4018959 4020515 . + . ID=gene-LNP58_RS18925;Name=LNP58_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18925;old_locus_tag=LNP58_18890 NZ_CP086372.1 Protein Homology CDS 4018959 4020515 . + 0 ID=cds-WP_011408741.1;Parent=gene-LNP58_RS18925;Dbxref=Genbank:WP_011408741.1;Name=WP_011408741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408741.1;locus_tag=LNP58_RS18925;product=YdiU family protein;protein_id=WP_011408741.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4020613 4021173 . + . ID=gene-LNP58_RS18930;Name=LNP58_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18930;old_locus_tag=LNP58_18895 NZ_CP086372.1 Protein Homology CDS 4020613 4021173 . + 0 ID=cds-WP_011259319.1;Parent=gene-LNP58_RS18930;Dbxref=Genbank:WP_011259319.1;Name=WP_011259319.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965724.1;locus_tag=LNP58_RS18930;product=adenine phosphoribosyltransferase;protein_id=WP_011259319.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4021276 4022652 . - . ID=gene-LNP58_RS18935;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LNP58_RS18935;old_locus_tag=LNP58_18900 NZ_CP086372.1 Protein Homology CDS 4021276 4022652 . - 0 ID=cds-WP_069959885.1;Parent=gene-LNP58_RS18935;Dbxref=Genbank:WP_069959885.1;Name=WP_069959885.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090365.1;locus_tag=LNP58_RS18935;product=ATP-dependent RNA helicase DbpA;protein_id=WP_069959885.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4022742 4024637 . + . ID=gene-LNP58_RS18940;Name=LNP58_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18940;old_locus_tag=LNP58_18905 NZ_CP086372.1 Protein Homology CDS 4022742 4024637 . + 0 ID=cds-WP_027703271.1;Parent=gene-LNP58_RS18940;Dbxref=Genbank:WP_027703271.1;Name=WP_027703271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=LNP58_RS18940;product=ATP-binding cassette domain-containing protein;protein_id=WP_027703271.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4024949 4025024 . - . ID=gene-LNP58_RS18945;Name=LNP58_RS18945;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS18945;old_locus_tag=LNP58_18910 NZ_CP086372.1 cmsearch ncRNA 4024949 4025024 . - . ID=rna-LNP58_RS18945;Parent=gene-LNP58_RS18945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18945;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4024949 4025024 . - . ID=exon-LNP58_RS18945-1;Parent=rna-LNP58_RS18945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS18945;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4025086 4025511 . - . ID=gene-LNP58_RS18950;Name=LNP58_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18950;old_locus_tag=LNP58_18915 NZ_CP086372.1 Protein Homology CDS 4025086 4025511 . - 0 ID=cds-WP_011259316.1;Parent=gene-LNP58_RS18950;Dbxref=Genbank:WP_011259316.1;Name=WP_011259316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486050.1;locus_tag=LNP58_RS18950;product=barstar family protein;protein_id=WP_011259316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4025508 4025948 . - . ID=gene-LNP58_RS18955;Name=LNP58_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18955;old_locus_tag=LNP58_18920 NZ_CP086372.1 Protein Homology CDS 4025508 4025948 . - 0 ID=cds-WP_011259315.1;Parent=gene-LNP58_RS18955;Dbxref=Genbank:WP_011259315.1;Name=WP_011259315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372742.1;locus_tag=LNP58_RS18955;product=ribonuclease;protein_id=WP_011259315.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4026203 4026814 . + . ID=gene-LNP58_RS18960;Name=LNP58_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18960;old_locus_tag=LNP58_18925 NZ_CP086372.1 Protein Homology CDS 4026203 4026814 . + 0 ID=cds-WP_011259314.1;Parent=gene-LNP58_RS18960;Dbxref=Genbank:WP_011259314.1;Name=WP_011259314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037422.1;locus_tag=LNP58_RS18960;product=superoxide dismutase;protein_id=WP_011259314.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4027067 4027900 . - . ID=gene-LNP58_RS18965;Name=LNP58_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18965;old_locus_tag=LNP58_18930 NZ_CP086372.1 Protein Homology CDS 4027067 4027900 . - 0 ID=cds-WP_011408740.1;Parent=gene-LNP58_RS18965;Dbxref=Genbank:WP_011408740.1;Name=WP_011408740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913068.1;locus_tag=LNP58_RS18965;product=inositol monophosphatase family protein;protein_id=WP_011408740.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4028019 4028783 . + . ID=gene-LNP58_RS18970;Name=LNP58_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18970;old_locus_tag=LNP58_18935 NZ_CP086372.1 Protein Homology CDS 4028019 4028783 . + 0 ID=cds-WP_011408739.1;Parent=gene-LNP58_RS18970;Dbxref=Genbank:WP_011408739.1;Name=WP_011408739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486059.1;locus_tag=LNP58_RS18970;product=RNA methyltransferase;protein_id=WP_011408739.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4028835 4029764 . + . ID=gene-LNP58_RS18975;Name=LNP58_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18975;old_locus_tag=LNP58_18940 NZ_CP086372.1 Protein Homology CDS 4028835 4029764 . + 0 ID=cds-WP_011259311.1;Parent=gene-LNP58_RS18975;Dbxref=Genbank:WP_011259311.1;Name=WP_011259311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850179.1;locus_tag=LNP58_RS18975;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_011259311.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4029761 4031878 . + . ID=gene-LNP58_RS18980;Name=LNP58_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18980;old_locus_tag=LNP58_18945 NZ_CP086372.1 Protein Homology CDS 4029761 4031878 . + 0 ID=cds-WP_011259310.1;Parent=gene-LNP58_RS18980;Dbxref=Genbank:WP_011259310.1;Name=WP_011259310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168504.1;locus_tag=LNP58_RS18980;product=EAL domain-containing protein;protein_id=WP_011259310.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4032097 4033125 . - . ID=gene-LNP58_RS18985;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LNP58_RS18985;old_locus_tag=LNP58_18950 NZ_CP086372.1 Protein Homology CDS 4032097 4033125 . - 0 ID=cds-WP_011408738.1;Parent=gene-LNP58_RS18985;Dbxref=Genbank:WP_011408738.1;Name=WP_011408738.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408738.1;locus_tag=LNP58_RS18985;product=EF-P beta-lysylation protein EpmB;protein_id=WP_011408738.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4033227 4033793 . + . ID=gene-LNP58_RS18990;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LNP58_RS18990;old_locus_tag=LNP58_18955 NZ_CP086372.1 Protein Homology CDS 4033227 4033793 . + 0 ID=cds-WP_002802373.1;Parent=gene-LNP58_RS18990;Dbxref=Genbank:WP_002802373.1;Name=WP_002802373.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301003.1;locus_tag=LNP58_RS18990;product=elongation factor P;protein_id=WP_002802373.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4033985 4034788 . + . ID=gene-LNP58_RS18995;Name=LNP58_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS18995;old_locus_tag=LNP58_18960 NZ_CP086372.1 Protein Homology CDS 4033985 4034788 . + 0 ID=cds-WP_012444720.1;Parent=gene-LNP58_RS18995;Dbxref=Genbank:WP_012444720.1;Name=WP_012444720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090359.1;locus_tag=LNP58_RS18995;product=hypothetical protein;protein_id=WP_012444720.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4034808 4036145 . + . ID=gene-LNP58_RS19000;Name=LNP58_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19000;old_locus_tag=LNP58_18965 NZ_CP086372.1 Protein Homology CDS 4034808 4036145 . + 0 ID=cds-WP_027703270.1;Parent=gene-LNP58_RS19000;Dbxref=Genbank:WP_027703270.1;Name=WP_027703270.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159956.1;locus_tag=LNP58_RS19000;product=TRZ/ATZ family hydrolase;protein_id=WP_027703270.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4036176 4036895 . + . ID=gene-LNP58_RS19005;Name=LNP58_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19005;old_locus_tag=LNP58_18970 NZ_CP086372.1 Protein Homology CDS 4036176 4036895 . + 0 ID=cds-WP_011259306.1;Parent=gene-LNP58_RS19005;Dbxref=Genbank:WP_011259306.1;Name=WP_011259306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372777.1;locus_tag=LNP58_RS19005;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_011259306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4036969 4037673 . + . ID=gene-LNP58_RS19010;Name=LNP58_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19010;old_locus_tag=LNP58_18975 NZ_CP086372.1 Protein Homology CDS 4036969 4037673 . + 0 ID=cds-WP_011408736.1;Parent=gene-LNP58_RS19010;Dbxref=Genbank:WP_011408736.1;Name=WP_011408736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408736.1;locus_tag=LNP58_RS19010;product=phosphoglycolate phosphatase;protein_id=WP_011408736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4037702 4038391 . + . ID=gene-LNP58_RS19015;Name=LNP58_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19015;old_locus_tag=LNP58_18980 NZ_CP086372.1 Protein Homology CDS 4037702 4038391 . + 0 ID=cds-WP_011259304.1;Parent=gene-LNP58_RS19015;Dbxref=Genbank:WP_011259304.1;Name=WP_011259304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156122.1;locus_tag=LNP58_RS19015;product=phytoene synthase;protein_id=WP_011259304.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4038608 4040278 . - . ID=gene-LNP58_RS19020;Name=LNP58_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19020;old_locus_tag=LNP58_18985 NZ_CP086372.1 Protein Homology CDS 4038608 4040278 . - 0 ID=cds-WP_011259303.1;Parent=gene-LNP58_RS19020;Dbxref=Genbank:WP_011259303.1;Name=WP_011259303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486074.1;locus_tag=LNP58_RS19020;product=glycoside hydrolase family 28 protein;protein_id=WP_011259303.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4040500 4041454 . + . ID=gene-LNP58_RS19025;Name=LNP58_RS19025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19025;old_locus_tag=LNP58_18990;pseudo=true NZ_CP086372.1 Protein Homology CDS 4040500 4041454 . + 0 ID=cds-LNP58_RS19025;Parent=gene-LNP58_RS19025;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS19025;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4041867 4043048 . - . ID=gene-LNP58_RS19030;Name=LNP58_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19030;old_locus_tag=LNP58_18995 NZ_CP086372.1 Protein Homology CDS 4041867 4043048 . - 0 ID=cds-WP_012444725.1;Parent=gene-LNP58_RS19030;Dbxref=Genbank:WP_012444725.1;Name=WP_012444725.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573436.1;locus_tag=LNP58_RS19030;product=putative acyl-CoA thioester hydrolase;protein_id=WP_012444725.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4043408 4044724 . - . ID=gene-LNP58_RS19035;Name=LNP58_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19035;old_locus_tag=LNP58_19000 NZ_CP086372.1 Protein Homology CDS 4043408 4044724 . - 0 ID=cds-WP_069964543.1;Parent=gene-LNP58_RS19035;Dbxref=Genbank:WP_069964543.1;Name=WP_069964543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19035;product=IS701-like element ISXo15 family transposase;protein_id=WP_069964543.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4044924 4045892 . - . ID=gene-LNP58_RS19040;Name=LNP58_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19040;old_locus_tag=LNP58_19005 NZ_CP086372.1 Protein Homology CDS 4044924 4045892 . - 0 ID=cds-WP_011258802.1-15;Parent=gene-LNP58_RS19040;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS19040;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4046029 4047348 . + . ID=gene-LNP58_RS19045;Name=LNP58_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19045;old_locus_tag=LNP58_19010 NZ_CP086372.1 Protein Homology CDS 4046029 4047348 . + 0 ID=cds-WP_011408734.1;Parent=gene-LNP58_RS19045;Dbxref=Genbank:WP_011408734.1;Name=WP_011408734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19045;product=IS701-like element ISXo15 family transposase;protein_id=WP_011408734.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4047572 4048060 . + . ID=gene-LNP58_RS19050;Name=LNP58_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19050;old_locus_tag=LNP58_19015 NZ_CP086372.1 Protein Homology CDS 4047572 4048060 . + 0 ID=cds-WP_012444728.1;Parent=gene-LNP58_RS19050;Dbxref=Genbank:WP_012444728.1;Name=WP_012444728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486918.1;locus_tag=LNP58_RS19050;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012444728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4048432 4048695 . + . ID=gene-LNP58_RS19055;Name=LNP58_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19055;old_locus_tag=LNP58_19020 NZ_CP086372.1 Protein Homology CDS 4048432 4048695 . + 0 ID=cds-WP_011259294.1;Parent=gene-LNP58_RS19055;Dbxref=Genbank:WP_011259294.1;Name=WP_011259294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156118.1;locus_tag=LNP58_RS19055;product=hypothetical protein;protein_id=WP_011259294.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4048721 4049484 . - . ID=gene-LNP58_RS19060;Name=LNP58_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19060;old_locus_tag=LNP58_19025 NZ_CP086372.1 Protein Homology CDS 4049169 4049484 . - 0 ID=cds-WP_229001909.1;Parent=gene-LNP58_RS19060;Dbxref=Genbank:WP_229001909.1;Name=WP_229001909.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19060;product=IS5 family transposase;protein_id=WP_229001909.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4048721 4049169 . - 2 ID=cds-WP_229001909.1;Parent=gene-LNP58_RS19060;Dbxref=Genbank:WP_229001909.1;Name=WP_229001909.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19060;product=IS5 family transposase;protein_id=WP_229001909.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4049566 4050035 . - . ID=gene-LNP58_RS19065;Name=LNP58_RS19065;end_range=4050035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19065;old_locus_tag=LNP58_19030;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4049566 4050035 . - 0 ID=cds-LNP58_RS19065;Parent=gene-LNP58_RS19065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006520,GO:0008851;end_range=4050035,.;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156117.1;locus_tag=LNP58_RS19065;partial=true;product=ethanolamine ammonia-lyase light chain EutC;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4050383 4051222 . - . ID=gene-LNP58_RS19070;Name=LNP58_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19070;old_locus_tag=LNP58_19035 NZ_CP086372.1 Protein Homology CDS 4050383 4051222 . - 0 ID=cds-WP_044756777.1;Parent=gene-LNP58_RS19070;Dbxref=Genbank:WP_044756777.1;Name=WP_044756777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159191.1;locus_tag=LNP58_RS19070;product=M23 family metallopeptidase;protein_id=WP_044756777.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4051222 4052571 . - . ID=gene-LNP58_RS19075;Name=LNP58_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19075;old_locus_tag=LNP58_19040 NZ_CP086372.1 Protein Homology CDS 4051222 4052571 . - 0 ID=cds-WP_011408728.1;Parent=gene-LNP58_RS19075;Dbxref=Genbank:WP_011408728.1;Name=WP_011408728.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302579.1;locus_tag=LNP58_RS19075;product=dihydroorotase;protein_id=WP_011408728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4052568 4052855 . - . ID=gene-LNP58_RS19080;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LNP58_RS19080;old_locus_tag=LNP58_19045 NZ_CP086372.1 Protein Homology CDS 4052568 4052855 . - 0 ID=cds-WP_011408727.1;Parent=gene-LNP58_RS19080;Dbxref=Genbank:WP_011408727.1;Name=WP_011408727.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347711.1;locus_tag=LNP58_RS19080;product=membrane protein insertion efficiency factor YidD;protein_id=WP_011408727.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4052940 4053980 . + . ID=gene-LNP58_RS19085;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LNP58_RS19085;old_locus_tag=LNP58_19050 NZ_CP086372.1 Protein Homology CDS 4052940 4053980 . + 0 ID=cds-WP_075242231.1;Parent=gene-LNP58_RS19085;Dbxref=Genbank:WP_075242231.1;Name=WP_075242231.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112367.1;locus_tag=LNP58_RS19085;product=RNA polymerase-binding protein DksA;protein_id=WP_075242231.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4054150 4055184 . + . ID=gene-LNP58_RS19090;Name=LNP58_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19090;old_locus_tag=LNP58_19055 NZ_CP086372.1 Protein Homology CDS 4054150 4055184 . + 0 ID=cds-WP_228329610.1;Parent=gene-LNP58_RS19090;Dbxref=Genbank:WP_228329610.1;Name=WP_228329610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259288.1;locus_tag=LNP58_RS19090;product=S41 family peptidase;protein_id=WP_228329610.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4055252 4056502 . - . ID=gene-LNP58_RS19095;Name=LNP58_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19095;old_locus_tag=LNP58_19060 NZ_CP086372.1 Protein Homology CDS 4055252 4056502 . - 0 ID=cds-WP_011259287.1;Parent=gene-LNP58_RS19095;Dbxref=Genbank:WP_011259287.1;Name=WP_011259287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573410.1;locus_tag=LNP58_RS19095;product=MFS transporter;protein_id=WP_011259287.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4056499 4056936 . - . ID=gene-LNP58_RS19100;Name=LNP58_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19100;old_locus_tag=LNP58_19065 NZ_CP086372.1 Protein Homology CDS 4056499 4056936 . - 0 ID=cds-WP_011408724.1;Parent=gene-LNP58_RS19100;Dbxref=Genbank:WP_011408724.1;Name=WP_011408724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159960.1;locus_tag=LNP58_RS19100;product=SufE family protein;protein_id=WP_011408724.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4057434 4058858 . - . ID=gene-LNP58_RS19105;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LNP58_RS19105;old_locus_tag=LNP58_19070 NZ_CP086372.1 Protein Homology CDS 4057434 4058858 . - 0 ID=cds-WP_012444736.1;Parent=gene-LNP58_RS19105;Dbxref=Genbank:WP_012444736.1;Name=WP_012444736.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444736.1;locus_tag=LNP58_RS19105;product=cysteine--tRNA ligase;protein_id=WP_012444736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4059035 4059529 . + . ID=gene-LNP58_RS19110;Name=LNP58_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19110;old_locus_tag=LNP58_19075 NZ_CP086372.1 Protein Homology CDS 4059035 4059529 . + 0 ID=cds-WP_027703614.1;Parent=gene-LNP58_RS19110;Dbxref=Genbank:WP_027703614.1;Name=WP_027703614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114649.1;locus_tag=LNP58_RS19110;product=hypothetical protein;protein_id=WP_027703614.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4059842 4060867 . + . ID=gene-LNP58_RS19115;Name=LNP58_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19115;old_locus_tag=LNP58_19080 NZ_CP086372.1 Protein Homology CDS 4059842 4060867 . + 0 ID=cds-WP_011259283.1;Parent=gene-LNP58_RS19115;Dbxref=Genbank:WP_011259283.1;Name=WP_011259283.1;Ontology_term=GO:0042450,GO:0016597,GO:0043857;gbkey=CDS;go_function=amino acid binding|0016597||IEA,N-acetylornithine carbamoyltransferase activity|0043857||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503633.1;locus_tag=LNP58_RS19115;product=N-acetylornithine carbamoyltransferase;protein_id=WP_011259283.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4060939 4062180 . + . ID=gene-LNP58_RS19120;Name=LNP58_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19120;old_locus_tag=LNP58_19085 NZ_CP086372.1 Protein Homology CDS 4060939 4062180 . + 0 ID=cds-WP_011259282.1;Parent=gene-LNP58_RS19120;Dbxref=Genbank:WP_011259282.1;Name=WP_011259282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300041.1;locus_tag=LNP58_RS19120;product=argininosuccinate synthase;protein_id=WP_011259282.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4062422 4062874 . + . ID=gene-LNP58_RS19125;Name=LNP58_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19125;old_locus_tag=LNP58_19090 NZ_CP086372.1 Protein Homology CDS 4062422 4062874 . + 0 ID=cds-WP_011408722.1;Parent=gene-LNP58_RS19125;Dbxref=Genbank:WP_011408722.1;Name=WP_011408722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913114.1;locus_tag=LNP58_RS19125;product=GNAT family N-acetyltransferase;protein_id=WP_011408722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4062880 4063980 . + . ID=gene-LNP58_RS19130;Name=LNP58_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19130;old_locus_tag=LNP58_19095 NZ_CP086372.1 Protein Homology CDS 4062880 4063980 . + 0 ID=cds-WP_011259280.1;Parent=gene-LNP58_RS19130;Dbxref=Genbank:WP_011259280.1;Name=WP_011259280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237600.1;locus_tag=LNP58_RS19130;product=acetylornithine deacetylase;protein_id=WP_011259280.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4064020 4065363 . + . ID=gene-LNP58_RS19135;Name=LNP58_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19135;old_locus_tag=LNP58_19100 NZ_CP086372.1 Protein Homology CDS 4064020 4065363 . + 0 ID=cds-WP_011259279.1;Parent=gene-LNP58_RS19135;Dbxref=Genbank:WP_011259279.1;Name=WP_011259279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174254.1;locus_tag=LNP58_RS19135;product=acetylglutamate kinase;protein_id=WP_011259279.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4065369 4065979 . + . ID=gene-LNP58_RS19140;Name=LNP58_RS19140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19140;old_locus_tag=LNP58_19105;pseudo=true NZ_CP086372.1 Protein Homology CDS 4065369 4065979 . + 0 ID=cds-LNP58_RS19140;Parent=gene-LNP58_RS19140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382263.1;locus_tag=LNP58_RS19140;product=GNAT family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4065976 4066926 . + . ID=gene-LNP58_RS19145;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LNP58_RS19145;old_locus_tag=LNP58_19110 NZ_CP086372.1 Protein Homology CDS 4065976 4066926 . + 0 ID=cds-WP_044756779.1;Parent=gene-LNP58_RS19145;Dbxref=Genbank:WP_044756779.1;Name=WP_044756779.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157784.1;locus_tag=LNP58_RS19145;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_044756779.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4067050 4068345 . + . ID=gene-LNP58_RS19150;Name=LNP58_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19150;old_locus_tag=LNP58_19115 NZ_CP086372.1 Protein Homology CDS 4067050 4068345 . + 0 ID=cds-WP_011408717.1;Parent=gene-LNP58_RS19150;Dbxref=Genbank:WP_011408717.1;Name=WP_011408717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116208.1;locus_tag=LNP58_RS19150;product=argininosuccinate lyase;protein_id=WP_011408717.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4068345 4068710 . + . ID=gene-LNP58_RS19155;Name=LNP58_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19155;old_locus_tag=LNP58_19120 NZ_CP086372.1 Protein Homology CDS 4068345 4068710 . + 0 ID=cds-WP_011408716.1;Parent=gene-LNP58_RS19155;Dbxref=Genbank:WP_011408716.1;Name=WP_011408716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408716.1;locus_tag=LNP58_RS19155;product=cupin domain-containing protein;protein_id=WP_011408716.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4068710 4068970 . + . ID=gene-LNP58_RS19160;Name=LNP58_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19160;old_locus_tag=LNP58_19125 NZ_CP086372.1 Protein Homology CDS 4068710 4068970 . + 0 ID=cds-WP_011259275.1;Parent=gene-LNP58_RS19160;Dbxref=Genbank:WP_011259275.1;Name=WP_011259275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347701.1;locus_tag=LNP58_RS19160;product=YciI family protein;protein_id=WP_011259275.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4068984 4070138 . + . ID=gene-LNP58_RS19165;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LNP58_RS19165;old_locus_tag=LNP58_19130 NZ_CP086372.1 Protein Homology CDS 4068984 4070138 . + 0 ID=cds-WP_011408715.1;Parent=gene-LNP58_RS19165;Dbxref=Genbank:WP_011408715.1;Name=WP_011408715.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167565.1;locus_tag=LNP58_RS19165;product=glutamate 5-kinase;protein_id=WP_011408715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4070366 4071610 . + . ID=gene-LNP58_RS19170;Name=LNP58_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19170;old_locus_tag=LNP58_19135 NZ_CP086372.1 Protein Homology CDS 4070366 4071610 . + 0 ID=cds-WP_011408714.1;Parent=gene-LNP58_RS19170;Dbxref=Genbank:WP_011408714.1;Name=WP_011408714.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972357.1;locus_tag=LNP58_RS19170;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_011408714.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4071978 4073891 . + . ID=gene-LNP58_RS19175;Name=LNP58_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19175;old_locus_tag=LNP58_19140 NZ_CP086372.1 Protein Homology CDS 4071978 4073891 . + 0 ID=cds-WP_044756781.1;Parent=gene-LNP58_RS19175;Dbxref=Genbank:WP_044756781.1;Name=WP_044756781.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259272.1;locus_tag=LNP58_RS19175;product=CocE/NonD family hydrolase;protein_id=WP_044756781.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4073872 4075098 . - . ID=gene-LNP58_RS19180;Name=LNP58_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19180;old_locus_tag=LNP58_19145 NZ_CP086372.1 Protein Homology CDS 4073872 4075098 . - 0 ID=cds-WP_027703616.1;Parent=gene-LNP58_RS19180;Dbxref=Genbank:WP_027703616.1;Name=WP_027703616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157790.1;locus_tag=LNP58_RS19180;product=MFS transporter;protein_id=WP_027703616.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4075222 4075298 . - . ID=gene-LNP58_RS19185;Name=LNP58_RS19185;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS19185;old_locus_tag=LNP58_19150 NZ_CP086372.1 tRNAscan-SE tRNA 4075222 4075298 . - . ID=rna-LNP58_RS19185;Parent=gene-LNP58_RS19185;anticodon=(pos:complement(4075262..4075264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19185;product=tRNA-Pro NZ_CP086372.1 tRNAscan-SE exon 4075222 4075298 . - . ID=exon-LNP58_RS19185-1;Parent=rna-LNP58_RS19185;anticodon=(pos:complement(4075262..4075264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19185;product=tRNA-Pro NZ_CP086372.1 RefSeq gene 4075358 4075468 . - . ID=gene-LNP58_RS19190;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LNP58_RS19190;old_locus_tag=LNP58_19155 NZ_CP086372.1 Protein Homology CDS 4075358 4075468 . - 0 ID=cds-WP_011259269.1;Parent=gene-LNP58_RS19190;Dbxref=Genbank:WP_011259269.1;Name=WP_011259269.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573380.1;locus_tag=LNP58_RS19190;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_011259269.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4075468 4075798 . - . ID=gene-LNP58_RS19195;Name=LNP58_RS19195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19195;old_locus_tag=LNP58_19160;partial=true;pseudo=true;start_range=.,4075468 NZ_CP086372.1 Protein Homology CDS 4075468 4075798 . - 0 ID=cds-LNP58_RS19195;Parent=gene-LNP58_RS19195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347694.1;locus_tag=LNP58_RS19195;partial=true;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;start_range=.,4075468;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4075815 4077259 . - . ID=gene-LNP58_RS19200;Name=LNP58_RS19200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19200;old_locus_tag=LNP58_19165;pseudo=true NZ_CP086372.1 Protein Homology CDS 4075815 4077259 . - 0 ID=cds-LNP58_RS19200;Parent=gene-LNP58_RS19200;Note=frameshifted%3B internal stop;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163785.1;locus_tag=LNP58_RS19200;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4077411 4079147 . + . ID=gene-LNP58_RS19205;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LNP58_RS19205;old_locus_tag=LNP58_19170 NZ_CP086372.1 Protein Homology CDS 4077411 4079147 . + 0 ID=cds-WP_075239845.1;Parent=gene-LNP58_RS19205;Dbxref=Genbank:WP_075239845.1;Name=WP_075239845.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005886,GO:0055051;gbkey=CDS;gene=cydD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160357.1;locus_tag=LNP58_RS19205;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_075239845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4079144 4080829 . + . ID=gene-LNP58_RS19210;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=LNP58_RS19210;old_locus_tag=LNP58_19175 NZ_CP086372.1 Protein Homology CDS 4079144 4080829 . + 0 ID=cds-WP_011408708.1;Parent=gene-LNP58_RS19210;Dbxref=Genbank:WP_011408708.1;Name=WP_011408708.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005886,GO:0055051;gbkey=CDS;gene=cydC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347691.1;locus_tag=LNP58_RS19210;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_011408708.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4080998 4082296 . - . ID=gene-LNP58_RS19215;Name=LNP58_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19215;old_locus_tag=LNP58_19180 NZ_CP086372.1 Protein Homology CDS 4080998 4082296 . - 0 ID=cds-WP_011408707.1;Parent=gene-LNP58_RS19215;Dbxref=Genbank:WP_011408707.1;Name=WP_011408707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=LNP58_RS19215;product=IS701-like element ISXo15 family transposase;protein_id=WP_011408707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4082303 4083268 . - . ID=gene-LNP58_RS19220;Name=LNP58_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19220;old_locus_tag=LNP58_19185 NZ_CP086372.1 Protein Homology CDS 4082303 4083268 . - 0 ID=cds-WP_228329611.1;Parent=gene-LNP58_RS19220;Dbxref=Genbank:WP_228329611.1;Name=WP_228329611.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS19220;product=IS1595-like element ISXo5 family transposase;protein_id=WP_228329611.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4084061 4084237 . + . ID=gene-LNP58_RS19225;Name=LNP58_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19225;old_locus_tag=LNP58_19190 NZ_CP086372.1 Protein Homology CDS 4084061 4084237 . + 0 ID=cds-WP_011408705.1;Parent=gene-LNP58_RS19225;Dbxref=Genbank:WP_011408705.1;Name=WP_011408705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302881.1;locus_tag=LNP58_RS19225;product=hypothetical protein;protein_id=WP_011408705.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4084542 4084617 . - . ID=gene-LNP58_RS19230;Name=LNP58_RS19230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS19230;old_locus_tag=LNP58_19195 NZ_CP086372.1 tRNAscan-SE tRNA 4084542 4084617 . - . ID=rna-LNP58_RS19230;Parent=gene-LNP58_RS19230;anticodon=(pos:complement(4084581..4084583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19230;product=tRNA-Glu NZ_CP086372.1 tRNAscan-SE exon 4084542 4084617 . - . ID=exon-LNP58_RS19230-1;Parent=rna-LNP58_RS19230;anticodon=(pos:complement(4084581..4084583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19230;product=tRNA-Glu NZ_CP086372.1 RefSeq gene 4084665 4084740 . - . ID=gene-LNP58_RS19235;Name=LNP58_RS19235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS19235;old_locus_tag=LNP58_19200 NZ_CP086372.1 tRNAscan-SE tRNA 4084665 4084740 . - . ID=rna-LNP58_RS19235;Parent=gene-LNP58_RS19235;anticodon=(pos:complement(4084705..4084707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19235;product=tRNA-Ala NZ_CP086372.1 tRNAscan-SE exon 4084665 4084740 . - . ID=exon-LNP58_RS19235-1;Parent=rna-LNP58_RS19235;anticodon=(pos:complement(4084705..4084707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19235;product=tRNA-Ala NZ_CP086372.1 RefSeq gene 4085500 4085575 . - . ID=gene-LNP58_RS19240;Name=LNP58_RS19240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS19240;old_locus_tag=LNP58_19205 NZ_CP086372.1 tRNAscan-SE tRNA 4085500 4085575 . - . ID=rna-LNP58_RS19240;Parent=gene-LNP58_RS19240;anticodon=(pos:complement(4085539..4085541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19240;product=tRNA-Glu NZ_CP086372.1 tRNAscan-SE exon 4085500 4085575 . - . ID=exon-LNP58_RS19240-1;Parent=rna-LNP58_RS19240;anticodon=(pos:complement(4085539..4085541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19240;product=tRNA-Glu NZ_CP086372.1 RefSeq gene 4085623 4085698 . - . ID=gene-LNP58_RS19245;Name=LNP58_RS19245;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS19245;old_locus_tag=LNP58_19210 NZ_CP086372.1 tRNAscan-SE tRNA 4085623 4085698 . - . ID=rna-LNP58_RS19245;Parent=gene-LNP58_RS19245;anticodon=(pos:complement(4085663..4085665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19245;product=tRNA-Ala NZ_CP086372.1 tRNAscan-SE exon 4085623 4085698 . - . ID=exon-LNP58_RS19245-1;Parent=rna-LNP58_RS19245;anticodon=(pos:complement(4085663..4085665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS19245;product=tRNA-Ala NZ_CP086372.1 RefSeq gene 4085791 4086252 . - . ID=gene-LNP58_RS19250;Name=LNP58_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19250;old_locus_tag=LNP58_19215 NZ_CP086372.1 Protein Homology CDS 4085791 4086252 . - 0 ID=cds-WP_011259261.1;Parent=gene-LNP58_RS19250;Dbxref=Genbank:WP_011259261.1;Name=WP_011259261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995424.1;locus_tag=LNP58_RS19250;product=cytochrome c;protein_id=WP_011259261.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4086261 4086653 . - . ID=gene-LNP58_RS19255;Name=LNP58_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19255;old_locus_tag=LNP58_19220 NZ_CP086372.1 Protein Homology CDS 4086261 4086653 . - 0 ID=cds-WP_011259260.1;Parent=gene-LNP58_RS19255;Dbxref=Genbank:WP_011259260.1;Name=WP_011259260.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051309.1;locus_tag=LNP58_RS19255;product=c-type cytochrome;protein_id=WP_011259260.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4086858 4087991 . + . ID=gene-LNP58_RS19260;Name=LNP58_RS19260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19260;old_locus_tag=LNP58_19225;pseudo=true NZ_CP086372.1 Protein Homology CDS 4086858 4087991 . + 0 ID=cds-LNP58_RS19260;Parent=gene-LNP58_RS19260;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090235.1;locus_tag=LNP58_RS19260;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4087988 4091513 . + . ID=gene-LNP58_RS19265;Name=LNP58_RS19265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19265;old_locus_tag=LNP58_19230;pseudo=true NZ_CP086372.1 Protein Homology CDS 4087988 4091513 . + 0 ID=cds-LNP58_RS19265;Parent=gene-LNP58_RS19265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482800.1;locus_tag=LNP58_RS19265;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4091510 4094578 . + . ID=gene-LNP58_RS19270;Name=LNP58_RS19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19270;old_locus_tag=LNP58_19235;pseudo=true NZ_CP086372.1 Protein Homology CDS 4091510 4094578 . + 0 ID=cds-LNP58_RS19270;Parent=gene-LNP58_RS19270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503513.1;locus_tag=LNP58_RS19270;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4094787 4095266 . + . ID=gene-LNP58_RS19275;Name=LNP58_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19275;old_locus_tag=LNP58_19240 NZ_CP086372.1 GeneMarkS-2+ CDS 4094787 4095266 . + 0 ID=cds-WP_128415342.1;Parent=gene-LNP58_RS19275;Dbxref=Genbank:WP_128415342.1;Name=WP_128415342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19275;product=hypothetical protein;protein_id=WP_128415342.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4095373 4096691 . - . ID=gene-LNP58_RS19280;Name=LNP58_RS19280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19280;old_locus_tag=LNP58_19245;pseudo=true NZ_CP086372.1 Protein Homology CDS 4095373 4096691 . - 0 ID=cds-LNP58_RS19280;Parent=gene-LNP58_RS19280;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19280;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4096891 4097859 . - . ID=gene-LNP58_RS19285;Name=LNP58_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19285;old_locus_tag=LNP58_19250 NZ_CP086372.1 Protein Homology CDS 4096891 4097859 . - 0 ID=cds-WP_011257031.1-5;Parent=gene-LNP58_RS19285;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS19285;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4097948 4099912 . + . ID=gene-LNP58_RS19290;Name=LNP58_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19290;old_locus_tag=LNP58_19255 NZ_CP086372.1 GeneMarkS-2+ CDS 4097948 4099912 . + 0 ID=cds-WP_069960219.1;Parent=gene-LNP58_RS19290;Dbxref=Genbank:WP_069960219.1;Name=WP_069960219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19290;product=hypothetical protein;protein_id=WP_069960219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4099923 4100891 . + . ID=gene-LNP58_RS19295;Name=LNP58_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19295;old_locus_tag=LNP58_19260 NZ_CP086372.1 Protein Homology CDS 4099923 4100891 . + 0 ID=cds-WP_011258802.1-16;Parent=gene-LNP58_RS19295;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS19295;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4101043 4101792 . + . ID=gene-LNP58_RS19300;Name=LNP58_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19300;old_locus_tag=LNP58_19265 NZ_CP086372.1 GeneMarkS-2+ CDS 4101043 4101792 . + 0 ID=cds-WP_011259257.1;Parent=gene-LNP58_RS19300;Dbxref=Genbank:WP_011259257.1;Name=WP_011259257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19300;product=hypothetical protein;protein_id=WP_011259257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4101822 4107062 . + . ID=gene-LNP58_RS19305;Name=LNP58_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19305;old_locus_tag=LNP58_19270 NZ_CP086372.1 Protein Homology CDS 4101822 4107062 . + 0 ID=cds-WP_075242299.1;Parent=gene-LNP58_RS19305;Dbxref=Genbank:WP_075242299.1;Name=WP_075242299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259256.1;locus_tag=LNP58_RS19305;product=DUF6531 domain-containing protein;protein_id=WP_075242299.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4107101 4107631 . + . ID=gene-LNP58_RS19310;Name=LNP58_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19310;old_locus_tag=LNP58_19275 NZ_CP086372.1 Protein Homology CDS 4107101 4107631 . + 0 ID=cds-WP_075242300.1;Parent=gene-LNP58_RS19310;Dbxref=Genbank:WP_075242300.1;Name=WP_075242300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024287.2;locus_tag=LNP58_RS19310;product=DUF3828 domain-containing protein;protein_id=WP_075242300.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4107726 4108694 . - . ID=gene-LNP58_RS19315;Name=LNP58_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19315;old_locus_tag=LNP58_19280 NZ_CP086372.1 Protein Homology CDS 4107726 4108694 . - 0 ID=cds-WP_011407175.1-3;Parent=gene-LNP58_RS19315;Dbxref=Genbank:WP_011407175.1;Name=WP_011407175.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS19315;product=IS5-like element ISXo1 family transposase;protein_id=WP_011407175.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4108844 4110163 . - . ID=gene-LNP58_RS19320;Name=LNP58_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19320;old_locus_tag=LNP58_19285 NZ_CP086372.1 Protein Homology CDS 4108844 4110163 . - 0 ID=cds-WP_115801909.1;Parent=gene-LNP58_RS19320;Dbxref=Genbank:WP_115801909.1;Name=WP_115801909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19320;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801909.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4110321 4111635 . - . ID=gene-LNP58_RS19325;Name=LNP58_RS19325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19325;old_locus_tag=LNP58_19290;pseudo=true NZ_CP086372.1 Protein Homology CDS 4110321 4111635 . - 0 ID=cds-LNP58_RS19325;Parent=gene-LNP58_RS19325;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19325;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4112189 4112485 . + . ID=gene-LNP58_RS19330;Name=LNP58_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19330;old_locus_tag=LNP58_19295 NZ_CP086372.1 GeneMarkS-2+ CDS 4112189 4112485 . + 0 ID=cds-WP_145973246.1;Parent=gene-LNP58_RS19330;Dbxref=Genbank:WP_145973246.1;Name=WP_145973246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19330;product=hypothetical protein;protein_id=WP_145973246.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4112584 4113600 . - . ID=gene-LNP58_RS19335;Name=LNP58_RS19335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19335;old_locus_tag=LNP58_19300;pseudo=true NZ_CP086372.1 Protein Homology CDS 4112584 4113600 . - 0 ID=cds-LNP58_RS19335;Parent=gene-LNP58_RS19335;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS19335;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4113649 4113828 . - . ID=gene-LNP58_RS19340;Name=LNP58_RS19340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19340;old_locus_tag=LNP58_19305;partial=true;pseudo=true;start_range=.,4113649 NZ_CP086372.1 Protein Homology CDS 4113649 4113828 . - 0 ID=cds-LNP58_RS19340;Parent=gene-LNP58_RS19340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502405.1;locus_tag=LNP58_RS19340;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4113649;transl_table=11 NZ_CP086372.1 RefSeq gene 4114017 4115675 . - . ID=gene-LNP58_RS19345;Name=LNP58_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19345;old_locus_tag=LNP58_19310 NZ_CP086372.1 Protein Homology CDS 4114017 4115675 . - 0 ID=cds-WP_011259250.1;Parent=gene-LNP58_RS19345;Dbxref=Genbank:WP_011259250.1;Name=WP_011259250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304939.1;locus_tag=LNP58_RS19345;product=chemotaxis protein CheA;protein_id=WP_011259250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4115678 4116304 . - . ID=gene-LNP58_RS19350;Name=LNP58_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19350;old_locus_tag=LNP58_19315 NZ_CP086372.1 Protein Homology CDS 4115678 4116304 . - 0 ID=cds-WP_011259249.1;Parent=gene-LNP58_RS19350;Dbxref=Genbank:WP_011259249.1;Name=WP_011259249.1;Ontology_term=GO:0050920,GO:0003824,GO:0009288;gbkey=CDS;go_component=bacterial-type flagellum|0009288||IEA;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302999.1;locus_tag=LNP58_RS19350;product=protein phosphatase CheZ;protein_id=WP_011259249.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4116304 4116696 . - . ID=gene-LNP58_RS19355;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LNP58_RS19355;old_locus_tag=LNP58_19320 NZ_CP086372.1 Protein Homology CDS 4116304 4116696 . - 0 ID=cds-WP_002813536.1;Parent=gene-LNP58_RS19355;Dbxref=Genbank:WP_002813536.1;Name=WP_002813536.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507662.1;locus_tag=LNP58_RS19355;product=chemotaxis response regulator CheY;protein_id=WP_002813536.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4116731 4117486 . - . ID=gene-LNP58_RS19360;Name=LNP58_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19360;old_locus_tag=LNP58_19325 NZ_CP086372.1 Protein Homology CDS 4116731 4117486 . - 0 ID=cds-WP_011259248.1;Parent=gene-LNP58_RS19360;Dbxref=Genbank:WP_011259248.1;Name=WP_011259248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259248.1;locus_tag=LNP58_RS19360;product=RNA polymerase sigma factor FliA;protein_id=WP_011259248.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4117483 4118367 . - . ID=gene-LNP58_RS19365;Name=LNP58_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19365;old_locus_tag=LNP58_19330 NZ_CP086372.1 Protein Homology CDS 4117483 4118367 . - 0 ID=cds-WP_005918202.1;Parent=gene-LNP58_RS19365;Dbxref=Genbank:WP_005918202.1;Name=WP_005918202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374294.1;locus_tag=LNP58_RS19365;product=MinD/ParA family protein;protein_id=WP_005918202.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4118354 4120012 . - . ID=gene-LNP58_RS19370;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=LNP58_RS19370;old_locus_tag=LNP58_19335 NZ_CP086372.1 Protein Homology CDS 4118354 4120012 . - 0 ID=cds-WP_011259247.1;Parent=gene-LNP58_RS19370;Dbxref=Genbank:WP_011259247.1;Name=WP_011259247.1;Ontology_term=GO:0006614,GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154801.1;locus_tag=LNP58_RS19370;product=flagellar biosynthesis protein FlhF;protein_id=WP_011259247.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4120597 4122669 . - . ID=gene-LNP58_RS19375;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LNP58_RS19375;old_locus_tag=LNP58_19340 NZ_CP086372.1 Protein Homology CDS 4120597 4122669 . - 0 ID=cds-WP_027703548.1;Parent=gene-LNP58_RS19375;Dbxref=Genbank:WP_027703548.1;Name=WP_027703548.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945277.1;locus_tag=LNP58_RS19375;product=flagellar biosynthesis protein FlhA;protein_id=WP_027703548.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4122687 4123817 . - . ID=gene-LNP58_RS19380;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LNP58_RS19380;old_locus_tag=LNP58_19345 NZ_CP086372.1 Protein Homology CDS 4122687 4123817 . - 0 ID=cds-WP_011259245.1;Parent=gene-LNP58_RS19380;Dbxref=Genbank:WP_011259245.1;Name=WP_011259245.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921357.1;locus_tag=LNP58_RS19380;product=flagellar biosynthesis protein FlhB;protein_id=WP_011259245.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4124061 4126157 . - . ID=gene-LNP58_RS19385;Name=LNP58_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19385;old_locus_tag=LNP58_19350 NZ_CP086372.1 Protein Homology CDS 4124061 4126157 . - 0 ID=cds-WP_027703547.1;Parent=gene-LNP58_RS19385;Dbxref=Genbank:WP_027703547.1;Name=WP_027703547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408691.1;locus_tag=LNP58_RS19385;product=EAL domain-containing protein;protein_id=WP_027703547.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4126408 4129329 . - . ID=gene-LNP58_RS19390;Name=LNP58_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19390;old_locus_tag=LNP58_19355 NZ_CP086372.1 Protein Homology CDS 4126408 4129329 . - 0 ID=cds-WP_011259243.1;Parent=gene-LNP58_RS19390;Dbxref=Genbank:WP_011259243.1;Name=WP_011259243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090104.1;locus_tag=LNP58_RS19390;product=ligand-binding sensor domain-containing diguanylate cyclase;protein_id=WP_011259243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4129688 4132660 . - . ID=gene-LNP58_RS19395;Name=LNP58_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19395;old_locus_tag=LNP58_19360 NZ_CP086372.1 Protein Homology CDS 4129688 4132660 . - 0 ID=cds-WP_011259242.1;Parent=gene-LNP58_RS19395;Dbxref=Genbank:WP_011259242.1;Name=WP_011259242.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259242.1;locus_tag=LNP58_RS19395;product=ligand-binding sensor domain-containing diguanylate cyclase;protein_id=WP_011259242.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4132755 4133546 . - . ID=gene-LNP58_RS19400;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LNP58_RS19400;old_locus_tag=LNP58_19365 NZ_CP086372.1 Protein Homology CDS 4132755 4133546 . - 0 ID=cds-WP_011259241.1;Parent=gene-LNP58_RS19400;Dbxref=Genbank:WP_011259241.1;Name=WP_011259241.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160558.1;locus_tag=LNP58_RS19400;product=flagellar biosynthetic protein FliR;protein_id=WP_011259241.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4133559 4133828 . - . ID=gene-LNP58_RS19405;Name=LNP58_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19405;old_locus_tag=LNP58_19370 NZ_CP086372.1 Protein Homology CDS 4133559 4133828 . - 0 ID=cds-WP_005917968.1;Parent=gene-LNP58_RS19405;Dbxref=Genbank:WP_005917968.1;Name=WP_005917968.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037081.1;locus_tag=LNP58_RS19405;product=flagellar biosynthetic protein FliQ;protein_id=WP_005917968.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4134247 4135092 . - . ID=gene-LNP58_RS19410;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LNP58_RS19410;old_locus_tag=LNP58_19375 NZ_CP086372.1 Protein Homology CDS 4134247 4135092 . - 0 ID=cds-WP_011259240.1;Parent=gene-LNP58_RS19410;Dbxref=Genbank:WP_011259240.1;Name=WP_011259240.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373751.1;locus_tag=LNP58_RS19410;product=flagellar type III secretion system pore protein FliP;protein_id=WP_011259240.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4135094 4135501 . - . ID=gene-LNP58_RS19415;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LNP58_RS19415;old_locus_tag=LNP58_19380 NZ_CP086372.1 Protein Homology CDS 4135094 4135501 . - 0 ID=cds-WP_027703545.1;Parent=gene-LNP58_RS19415;Dbxref=Genbank:WP_027703545.1;Name=WP_027703545.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158024.1;locus_tag=LNP58_RS19415;product=flagellar biosynthetic protein FliO;protein_id=WP_027703545.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4135507 4135845 . - . ID=gene-LNP58_RS19420;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LNP58_RS19420;old_locus_tag=LNP58_19385 NZ_CP086372.1 Protein Homology CDS 4135507 4135845 . - 0 ID=cds-WP_011259238.1;Parent=gene-LNP58_RS19420;Dbxref=Genbank:WP_011259238.1;Name=WP_011259238.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507674.1;locus_tag=LNP58_RS19420;product=flagellar motor switch protein FliN;protein_id=WP_011259238.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4135842 4136855 . - . ID=gene-LNP58_RS19425;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LNP58_RS19425;old_locus_tag=LNP58_19390 NZ_CP086372.1 Protein Homology CDS 4135842 4136855 . - 0 ID=cds-WP_011259237.1;Parent=gene-LNP58_RS19425;Dbxref=Genbank:WP_011259237.1;Name=WP_011259237.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302238.1;locus_tag=LNP58_RS19425;product=flagellar motor switch protein FliM;protein_id=WP_011259237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4136866 4137390 . - . ID=gene-LNP58_RS19430;Name=LNP58_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19430;old_locus_tag=LNP58_19395 NZ_CP086372.1 Protein Homology CDS 4136866 4137390 . - 0 ID=cds-WP_011259236.1;Parent=gene-LNP58_RS19430;Dbxref=Genbank:WP_011259236.1;Name=WP_011259236.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917978.1;locus_tag=LNP58_RS19430;product=flagellar basal body-associated FliL family protein;protein_id=WP_011259236.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4137582 4138856 . - . ID=gene-LNP58_RS19435;Name=LNP58_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19435;old_locus_tag=LNP58_19400 NZ_CP086372.1 Protein Homology CDS 4137582 4138856 . - 0 ID=cds-WP_011408688.1;Parent=gene-LNP58_RS19435;Dbxref=Genbank:WP_011408688.1;Name=WP_011408688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159589.1;locus_tag=LNP58_RS19435;product=flagellar hook-length control protein FliK;protein_id=WP_011408688.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4138853 4139308 . - . ID=gene-LNP58_RS19440;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LNP58_RS19440;old_locus_tag=LNP58_19405 NZ_CP086372.1 Protein Homology CDS 4138853 4139308 . - 0 ID=cds-WP_011259234.1;Parent=gene-LNP58_RS19440;Dbxref=Genbank:WP_011259234.1;Name=WP_011259234.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158028.1;locus_tag=LNP58_RS19440;product=flagellar export protein FliJ;protein_id=WP_011259234.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4139312 4140688 . - . ID=gene-LNP58_RS19445;Name=LNP58_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19445;old_locus_tag=LNP58_19410 NZ_CP086372.1 Protein Homology CDS 4139312 4140688 . - 0 ID=cds-WP_011259233.1;Parent=gene-LNP58_RS19445;Dbxref=Genbank:WP_011259233.1;Name=WP_011259233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904676.1;locus_tag=LNP58_RS19445;product=FliI/YscN family ATPase;protein_id=WP_011259233.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4140685 4141305 . - . ID=gene-LNP58_RS19450;Name=LNP58_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19450;old_locus_tag=LNP58_19415 NZ_CP086372.1 Protein Homology CDS 4140685 4141305 . - 0 ID=cds-WP_011408687.1;Parent=gene-LNP58_RS19450;Dbxref=Genbank:WP_011408687.1;Name=WP_011408687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850279.1;locus_tag=LNP58_RS19450;product=FliH/SctL family protein;protein_id=WP_011408687.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4141302 4142291 . - . ID=gene-LNP58_RS19455;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LNP58_RS19455;old_locus_tag=LNP58_19420 NZ_CP086372.1 Protein Homology CDS 4141302 4142291 . - 0 ID=cds-WP_011408686.1;Parent=gene-LNP58_RS19455;Dbxref=Genbank:WP_011408686.1;Name=WP_011408686.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158030.1;locus_tag=LNP58_RS19455;product=flagellar motor switch protein FliG;protein_id=WP_011408686.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4142302 4144026 . - . ID=gene-LNP58_RS19460;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LNP58_RS19460;old_locus_tag=LNP58_19425 NZ_CP086372.1 Protein Homology CDS 4142302 4144026 . - 0 ID=cds-WP_011259230.1;Parent=gene-LNP58_RS19460;Dbxref=Genbank:WP_011259230.1;Name=WP_011259230.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158031.1;locus_tag=LNP58_RS19460;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_011259230.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4144040 4144411 . - . ID=gene-LNP58_RS19465;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LNP58_RS19465;old_locus_tag=LNP58_19430 NZ_CP086372.1 Protein Homology CDS 4144040 4144411 . - 0 ID=cds-WP_012445073.1;Parent=gene-LNP58_RS19465;Dbxref=Genbank:WP_012445073.1;Name=WP_012445073.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997134.1;locus_tag=LNP58_RS19465;product=flagellar hook-basal body complex protein FliE;protein_id=WP_012445073.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4145295 4148792 . - . ID=gene-LNP58_RS19470;Name=LNP58_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19470;old_locus_tag=LNP58_19435 NZ_CP086372.1 Protein Homology CDS 4145295 4148792 . - 0 ID=cds-WP_173340386.1;Parent=gene-LNP58_RS19470;Dbxref=Genbank:WP_173340386.1;Name=WP_173340386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158033.1;locus_tag=LNP58_RS19470;product=glycosyltransferase;protein_id=WP_173340386.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4148955 4150478 . - . ID=gene-LNP58_RS19475;Name=LNP58_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19475;old_locus_tag=LNP58_19440 NZ_CP086372.1 Protein Homology CDS 4148955 4150478 . - 0 ID=cds-WP_041182149.1;Parent=gene-LNP58_RS19475;Dbxref=Genbank:WP_041182149.1;Name=WP_041182149.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118762.1;locus_tag=LNP58_RS19475;product=FkbM family methyltransferase;protein_id=WP_041182149.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4150475 4151098 . - . ID=gene-LNP58_RS19480;Name=LNP58_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19480;old_locus_tag=LNP58_19445 NZ_CP086372.1 Protein Homology CDS 4150475 4151098 . - 0 ID=cds-WP_011259226.1;Parent=gene-LNP58_RS19480;Dbxref=Genbank:WP_011259226.1;Name=WP_011259226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259226.1;locus_tag=LNP58_RS19480;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_011259226.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4151088 4152233 . - . ID=gene-LNP58_RS19485;Name=LNP58_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19485;old_locus_tag=LNP58_19450 NZ_CP086372.1 Protein Homology CDS 4151088 4152233 . - 0 ID=cds-WP_011259225.1;Parent=gene-LNP58_RS19485;Dbxref=Genbank:WP_011259225.1;Name=WP_011259225.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921325.1;locus_tag=LNP58_RS19485;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_011259225.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4152237 4152887 . - . ID=gene-LNP58_RS19490;Name=LNP58_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19490;old_locus_tag=LNP58_19455 NZ_CP086372.1 Protein Homology CDS 4152237 4152887 . - 0 ID=cds-WP_011408682.1;Parent=gene-LNP58_RS19490;Dbxref=Genbank:WP_011408682.1;Name=WP_011408682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503303.1;locus_tag=LNP58_RS19490;product=acetyltransferase;protein_id=WP_011408682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4152887 4153639 . - . ID=gene-LNP58_RS19495;Name=LNP58_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19495;old_locus_tag=LNP58_19460 NZ_CP086372.1 Protein Homology CDS 4152887 4153639 . - 0 ID=cds-WP_011259224.1;Parent=gene-LNP58_RS19495;Dbxref=Genbank:WP_011259224.1;Name=WP_011259224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302783.1;locus_tag=LNP58_RS19495;product=SDR family oxidoreductase;protein_id=WP_011259224.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4153636 4154409 . - . ID=gene-LNP58_RS19500;Name=LNP58_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19500;old_locus_tag=LNP58_19465 NZ_CP086372.1 Protein Homology CDS 4153636 4154409 . - 0 ID=cds-WP_011408681.1;Parent=gene-LNP58_RS19500;Dbxref=Genbank:WP_011408681.1;Name=WP_011408681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373659.1;locus_tag=LNP58_RS19500;product=SDR family oxidoreductase;protein_id=WP_011408681.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4154406 4155446 . - . ID=gene-LNP58_RS19505;Name=LNP58_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19505;old_locus_tag=LNP58_19470 NZ_CP086372.1 Protein Homology CDS 4154406 4155446 . - 0 ID=cds-WP_011259222.1;Parent=gene-LNP58_RS19505;Dbxref=Genbank:WP_011259222.1;Name=WP_011259222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466860.1;locus_tag=LNP58_RS19505;product=ketoacyl-ACP synthase III;protein_id=WP_011259222.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4155452 4155676 . - . ID=gene-LNP58_RS19510;Name=LNP58_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19510;old_locus_tag=LNP58_19475 NZ_CP086372.1 Protein Homology CDS 4155452 4155676 . - 0 ID=cds-WP_011408679.1;Parent=gene-LNP58_RS19510;Dbxref=Genbank:WP_011408679.1;Name=WP_011408679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302780.1;locus_tag=LNP58_RS19510;product=acyl carrier protein;protein_id=WP_011408679.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4155741 4156850 . - . ID=gene-LNP58_RS19515;Name=LNP58_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19515;old_locus_tag=LNP58_19480 NZ_CP086372.1 Protein Homology CDS 4155741 4156850 . - 0 ID=cds-WP_041182148.1;Parent=gene-LNP58_RS19515;Dbxref=Genbank:WP_041182148.1;Name=WP_041182148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373650.1;locus_tag=LNP58_RS19515;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_041182148.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4156969 4158453 . - . ID=gene-LNP58_RS19520;Name=LNP58_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19520;old_locus_tag=LNP58_19485 NZ_CP086372.1 Protein Homology CDS 4156969 4158453 . - 0 ID=cds-WP_011259219.1;Parent=gene-LNP58_RS19520;Dbxref=Genbank:WP_011259219.1;Name=WP_011259219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452274.1;locus_tag=LNP58_RS19520;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011259219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4158450 4158830 . - . ID=gene-LNP58_RS19525;Name=LNP58_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19525;old_locus_tag=LNP58_19490 NZ_CP086372.1 Protein Homology CDS 4158450 4158830 . - 0 ID=cds-WP_011259218.1;Parent=gene-LNP58_RS19525;Dbxref=Genbank:WP_011259218.1;Name=WP_011259218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259218.1;locus_tag=LNP58_RS19525;product=response regulator transcription factor;protein_id=WP_011259218.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4158839 4160242 . - . ID=gene-LNP58_RS19530;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LNP58_RS19530;old_locus_tag=LNP58_19495 NZ_CP086372.1 Protein Homology CDS 4158839 4160242 . - 0 ID=cds-WP_011259217.1;Parent=gene-LNP58_RS19530;Dbxref=Genbank:WP_011259217.1;Name=WP_011259217.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302731.1;locus_tag=LNP58_RS19530;product=RNA polymerase factor sigma-54;protein_id=WP_011259217.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4160466 4161053 . - . ID=gene-LNP58_RS19535;Name=LNP58_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19535;old_locus_tag=LNP58_19500 NZ_CP086372.1 Protein Homology CDS 4160466 4161053 . - 0 ID=cds-WP_221205632.1;Parent=gene-LNP58_RS19535;Dbxref=Genbank:WP_221205632.1;Name=WP_221205632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037101.1;locus_tag=LNP58_RS19535;product=response regulator transcription factor;protein_id=WP_221205632.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4160988 4161125 . + . ID=gene-LNP58_RS19540;Name=LNP58_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19540;old_locus_tag=LNP58_19505 NZ_CP086372.1 GeneMarkS-2+ CDS 4160988 4161125 . + 0 ID=cds-WP_228329767.1;Parent=gene-LNP58_RS19540;Dbxref=Genbank:WP_228329767.1;Name=WP_228329767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19540;product=hypothetical protein;protein_id=WP_228329767.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4161169 4161735 . - . ID=gene-LNP58_RS19545;Name=LNP58_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19545;old_locus_tag=LNP58_19510 NZ_CP086372.1 Protein Homology CDS 4161169 4161735 . - 0 ID=cds-WP_044756793.1;Parent=gene-LNP58_RS19545;Dbxref=Genbank:WP_044756793.1;Name=WP_044756793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154658.1;locus_tag=LNP58_RS19545;product=PilZ domain-containing protein;protein_id=WP_044756793.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4161735 4162028 . - . ID=gene-LNP58_RS19550;Name=LNP58_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19550;old_locus_tag=LNP58_19515 NZ_CP086372.1 Protein Homology CDS 4161735 4162028 . - 0 ID=cds-WP_019302728.1;Parent=gene-LNP58_RS19550;Dbxref=Genbank:WP_019302728.1;Name=WP_019302728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154657.1;locus_tag=LNP58_RS19550;product=hypothetical protein;protein_id=WP_019302728.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4162037 4162450 . - . ID=gene-LNP58_RS19555;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LNP58_RS19555;old_locus_tag=LNP58_19520 NZ_CP086372.1 Protein Homology CDS 4162037 4162450 . - 0 ID=cds-WP_011259214.1;Parent=gene-LNP58_RS19555;Dbxref=Genbank:WP_011259214.1;Name=WP_011259214.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575950.1;locus_tag=LNP58_RS19555;product=flagellar export chaperone FliS;protein_id=WP_011259214.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4162601 4163926 . - . ID=gene-LNP58_RS19560;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LNP58_RS19560;old_locus_tag=LNP58_19525 NZ_CP086372.1 Protein Homology CDS 4162601 4163926 . - 0 ID=cds-WP_044756794.1;Parent=gene-LNP58_RS19560;Dbxref=Genbank:WP_044756794.1;Name=WP_044756794.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380873.1;locus_tag=LNP58_RS19560;product=flagellar filament capping protein FliD;protein_id=WP_044756794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4164200 4165399 . - . ID=gene-LNP58_RS19565;Name=LNP58_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19565;old_locus_tag=LNP58_19530 NZ_CP086372.1 Protein Homology CDS 4164200 4165399 . - 0 ID=cds-WP_011408675.1;Parent=gene-LNP58_RS19565;Dbxref=Genbank:WP_011408675.1;Name=WP_011408675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962409.1;locus_tag=LNP58_RS19565;product=flagellin;protein_id=WP_011408675.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4165719 4166924 . - . ID=gene-LNP58_RS19570;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LNP58_RS19570;old_locus_tag=LNP58_19535 NZ_CP086372.1 Protein Homology CDS 4165719 4166924 . - 0 ID=cds-WP_011259211.1;Parent=gene-LNP58_RS19570;Dbxref=Genbank:WP_011259211.1;Name=WP_011259211.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154653.1;locus_tag=LNP58_RS19570;product=flagellar hook-associated protein FlgL;protein_id=WP_011259211.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4166924 4168798 . - . ID=gene-LNP58_RS19575;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LNP58_RS19575;old_locus_tag=LNP58_19540 NZ_CP086372.1 Protein Homology CDS 4166924 4168798 . - 0 ID=cds-WP_069959875.1;Parent=gene-LNP58_RS19575;Dbxref=Genbank:WP_069959875.1;Name=WP_069959875.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300294.1;locus_tag=LNP58_RS19575;product=flagellar hook-associated protein FlgK;protein_id=WP_069959875.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4168810 4169988 . - . ID=gene-LNP58_RS19580;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LNP58_RS19580;old_locus_tag=LNP58_19545 NZ_CP086372.1 Protein Homology CDS 4168810 4169988 . - 0 ID=cds-WP_011259209.1;Parent=gene-LNP58_RS19580;Dbxref=Genbank:WP_011259209.1;Name=WP_011259209.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482966.1;locus_tag=LNP58_RS19580;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_011259209.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4169990 4171108 . - . ID=gene-LNP58_RS19585;Name=LNP58_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19585;old_locus_tag=LNP58_19550 NZ_CP086372.1 Protein Homology CDS 4169990 4171108 . - 0 ID=cds-WP_011259208.1;Parent=gene-LNP58_RS19585;Dbxref=Genbank:WP_011259208.1;Name=WP_011259208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482965.1;locus_tag=LNP58_RS19585;product=flagellar basal body P-ring protein FlgI;protein_id=WP_011259208.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4171119 4171811 . - . ID=gene-LNP58_RS19590;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LNP58_RS19590;old_locus_tag=LNP58_19555 NZ_CP086372.1 Protein Homology CDS 4171119 4171811 . - 0 ID=cds-WP_011259207.1;Parent=gene-LNP58_RS19590;Dbxref=Genbank:WP_011259207.1;Name=WP_011259207.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901722.1;locus_tag=LNP58_RS19590;product=flagellar basal body L-ring protein FlgH;protein_id=WP_011259207.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4171849 4172634 . - . ID=gene-LNP58_RS19595;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LNP58_RS19595;old_locus_tag=LNP58_19560 NZ_CP086372.1 Protein Homology CDS 4171849 4172634 . - 0 ID=cds-WP_011259206.1;Parent=gene-LNP58_RS19595;Dbxref=Genbank:WP_011259206.1;Name=WP_011259206.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901723.1;locus_tag=LNP58_RS19595;product=flagellar basal-body rod protein FlgG;protein_id=WP_011259206.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4173215 4173970 . - . ID=gene-LNP58_RS19600;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=LNP58_RS19600;old_locus_tag=LNP58_19565 NZ_CP086372.1 Protein Homology CDS 4173215 4173970 . - 0 ID=cds-WP_011259205.1;Parent=gene-LNP58_RS19600;Dbxref=Genbank:WP_011259205.1;Name=WP_011259205.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=flgF;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154648.1;locus_tag=LNP58_RS19600;product=flagellar basal-body rod protein FlgF;protein_id=WP_011259205.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4174116 4175339 . - . ID=gene-LNP58_RS19605;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LNP58_RS19605;old_locus_tag=LNP58_19570 NZ_CP086372.1 Protein Homology CDS 4174116 4175339 . - 0 ID=cds-WP_011259204.1;Parent=gene-LNP58_RS19605;Dbxref=Genbank:WP_011259204.1;Name=WP_011259204.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159265.1;locus_tag=LNP58_RS19605;product=flagellar hook protein FlgE;protein_id=WP_011259204.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4175371 4176036 . - . ID=gene-LNP58_RS19610;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=LNP58_RS19610;old_locus_tag=LNP58_19575 NZ_CP086372.1 Protein Homology CDS 4175371 4176036 . - 0 ID=cds-WP_011259203.1;Parent=gene-LNP58_RS19610;Dbxref=Genbank:WP_011259203.1;Name=WP_011259203.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117421.1;locus_tag=LNP58_RS19610;product=flagellar basal body rod modification protein FlgD;protein_id=WP_011259203.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4176074 4176481 . - . ID=gene-LNP58_RS19615;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LNP58_RS19615;old_locus_tag=LNP58_19580 NZ_CP086372.1 Protein Homology CDS 4176074 4176481 . - 0 ID=cds-WP_005914451.1;Parent=gene-LNP58_RS19615;Dbxref=Genbank:WP_005914451.1;Name=WP_005914451.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425624.1;locus_tag=LNP58_RS19615;product=flagellar basal body rod protein FlgC;protein_id=WP_005914451.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4176485 4176883 . - . ID=gene-LNP58_RS19620;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LNP58_RS19620;old_locus_tag=LNP58_19585 NZ_CP086372.1 Protein Homology CDS 4176485 4176883 . - 0 ID=cds-WP_011259201.1;Parent=gene-LNP58_RS19620;Dbxref=Genbank:WP_011259201.1;Name=WP_011259201.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482950.1;locus_tag=LNP58_RS19620;product=flagellar basal body rod protein FlgB;protein_id=WP_011259201.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4177198 4178142 . - . ID=gene-LNP58_RS19625;Name=LNP58_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19625;old_locus_tag=LNP58_19590 NZ_CP086372.1 Protein Homology CDS 4177198 4178142 . - 0 ID=cds-WP_011259200.1;Parent=gene-LNP58_RS19625;Dbxref=Genbank:WP_011259200.1;Name=WP_011259200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813451.1;locus_tag=LNP58_RS19625;product=chemotaxis protein;protein_id=WP_011259200.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4178501 4179145 . + . ID=gene-LNP58_RS19630;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LNP58_RS19630;old_locus_tag=LNP58_19595 NZ_CP086372.1 Protein Homology CDS 4178501 4179145 . + 0 ID=cds-WP_011259199.1;Parent=gene-LNP58_RS19630;Dbxref=Genbank:WP_011259199.1;Name=WP_011259199.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373601.1;locus_tag=LNP58_RS19630;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_011259199.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4179212 4179523 . + . ID=gene-LNP58_RS19635;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LNP58_RS19635;old_locus_tag=LNP58_19600 NZ_CP086372.1 Protein Homology CDS 4179212 4179523 . + 0 ID=cds-WP_011259198.1;Parent=gene-LNP58_RS19635;Dbxref=Genbank:WP_011259198.1;Name=WP_011259198.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503328.1;locus_tag=LNP58_RS19635;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_011259198.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4179539 4179871 . + . ID=gene-LNP58_RS19640;Name=LNP58_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19640;old_locus_tag=LNP58_19605 NZ_CP086372.1 Protein Homology CDS 4179539 4179871 . + 0 ID=cds-WP_010373599.1;Parent=gene-LNP58_RS19640;Dbxref=Genbank:WP_010373599.1;Name=WP_010373599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450202.1;locus_tag=LNP58_RS19640;product=hypothetical protein;protein_id=WP_010373599.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4180037 4181263 . + . ID=gene-LNP58_RS19645;Name=LNP58_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19645;old_locus_tag=LNP58_19610 NZ_CP086372.1 Protein Homology CDS 4180037 4181263 . + 0 ID=cds-WP_011259197.1;Parent=gene-LNP58_RS19645;Dbxref=Genbank:WP_011259197.1;Name=WP_011259197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304404.1;locus_tag=LNP58_RS19645;product=ATP-binding protein;protein_id=WP_011259197.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4181391 4183112 . - . ID=gene-LNP58_RS19650;Name=LNP58_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19650;old_locus_tag=LNP58_19615 NZ_CP086372.1 Protein Homology CDS 4181391 4183112 . - 0 ID=cds-WP_011259196.1;Parent=gene-LNP58_RS19650;Dbxref=Genbank:WP_011259196.1;Name=WP_011259196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154643.1;locus_tag=LNP58_RS19650;product=EAL domain-containing protein;protein_id=WP_011259196.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4183116 4185248 . - . ID=gene-LNP58_RS19655;Name=LNP58_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19655;old_locus_tag=LNP58_19620 NZ_CP086372.1 Protein Homology CDS 4183116 4185248 . - 0 ID=cds-WP_011259195.1;Parent=gene-LNP58_RS19655;Dbxref=Genbank:WP_011259195.1;Name=WP_011259195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848734.1;locus_tag=LNP58_RS19655;product=PAS domain S-box protein;protein_id=WP_011259195.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4185369 4188155 . + . ID=gene-LNP58_RS19660;Name=LNP58_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19660;old_locus_tag=LNP58_19625 NZ_CP086372.1 Protein Homology CDS 4185369 4188155 . + 0 ID=cds-WP_027703235.1;Parent=gene-LNP58_RS19660;Dbxref=Genbank:WP_027703235.1;Name=WP_027703235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347293.1;locus_tag=LNP58_RS19660;product=EAL domain-containing protein;protein_id=WP_027703235.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4188626 4189309 . - . ID=gene-LNP58_RS19665;Name=LNP58_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19665;old_locus_tag=LNP58_19630 NZ_CP086372.1 Protein Homology CDS 4188626 4189309 . - 0 ID=cds-WP_011259193.1;Parent=gene-LNP58_RS19665;Dbxref=Genbank:WP_011259193.1;Name=WP_011259193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259193.1;locus_tag=LNP58_RS19665;product=hypothetical protein;protein_id=WP_011259193.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4189584 4189871 . - . ID=gene-LNP58_RS19670;Name=LNP58_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19670;old_locus_tag=LNP58_19635 NZ_CP086372.1 Protein Homology CDS 4189584 4189871 . - 0 ID=cds-WP_011259192.1;Parent=gene-LNP58_RS19670;Dbxref=Genbank:WP_011259192.1;Name=WP_011259192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575786.1;locus_tag=LNP58_RS19670;product=hypothetical protein;protein_id=WP_011259192.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4189957 4191234 . - . ID=gene-LNP58_RS19675;Name=LNP58_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19675;old_locus_tag=LNP58_19640 NZ_CP086372.1 Protein Homology CDS 4189957 4191234 . - 0 ID=cds-WP_011259191.1;Parent=gene-LNP58_RS19675;Dbxref=Genbank:WP_011259191.1;Name=WP_011259191.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159263.1;locus_tag=LNP58_RS19675;product=methyl-accepting chemotaxis protein;protein_id=WP_011259191.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4191295 4191909 . - . ID=gene-LNP58_RS19680;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LNP58_RS19680;old_locus_tag=LNP58_19645 NZ_CP086372.1 Protein Homology CDS 4191295 4191909 . - 0 ID=cds-WP_011408667.1;Parent=gene-LNP58_RS19680;Dbxref=Genbank:WP_011408667.1;Name=WP_011408667.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_029217215.1;locus_tag=LNP58_RS19680;product=high frequency lysogenization protein HflD;protein_id=WP_011408667.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4191909 4193045 . - . ID=gene-LNP58_RS19685;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LNP58_RS19685;old_locus_tag=LNP58_19650 NZ_CP086372.1 Protein Homology CDS 4191909 4193045 . - 0 ID=cds-WP_011259189.1;Parent=gene-LNP58_RS19685;Dbxref=Genbank:WP_011259189.1;Name=WP_011259189.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575784.1;locus_tag=LNP58_RS19685;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_011259189.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4193042 4193500 . - . ID=gene-LNP58_RS19690;Name=LNP58_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19690;old_locus_tag=LNP58_19655 NZ_CP086372.1 Protein Homology CDS 4193042 4193500 . - 0 ID=cds-WP_011408665.1;Parent=gene-LNP58_RS19690;Dbxref=Genbank:WP_011408665.1;Name=WP_011408665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964277.1;locus_tag=LNP58_RS19690;product=NUDIX hydrolase;protein_id=WP_011408665.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4193751 4194071 . + . ID=gene-LNP58_RS19695;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LNP58_RS19695;old_locus_tag=LNP58_19660 NZ_CP086372.1 Protein Homology CDS 4193751 4194071 . + 0 ID=cds-WP_005914463.1;Parent=gene-LNP58_RS19695;Dbxref=Genbank:WP_005914463.1;Name=WP_005914463.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914463.1;locus_tag=LNP58_RS19695;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_005914463.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4194215 4196497 . + . ID=gene-LNP58_RS19700;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LNP58_RS19700;old_locus_tag=LNP58_19665 NZ_CP086372.1 Protein Homology CDS 4194215 4196497 . + 0 ID=cds-WP_011259186.1;Parent=gene-LNP58_RS19700;Dbxref=Genbank:WP_011259186.1;Name=WP_011259186.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901749.1;locus_tag=LNP58_RS19700;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011259186.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4196778 4196996 . - . ID=gene-LNP58_RS19705;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LNP58_RS19705;old_locus_tag=LNP58_19670 NZ_CP086372.1 Protein Homology CDS 4196778 4196996 . - 0 ID=cds-WP_002813418.1;Parent=gene-LNP58_RS19705;Dbxref=Genbank:WP_002813418.1;Name=WP_002813418.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553999.1;locus_tag=LNP58_RS19705;product=translation initiation factor IF-1;protein_id=WP_002813418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4197077 4197874 . - . ID=gene-LNP58_RS19710;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LNP58_RS19710;old_locus_tag=LNP58_19675 NZ_CP086372.1 Protein Homology CDS 4197077 4197874 . - 0 ID=cds-WP_011259185.1;Parent=gene-LNP58_RS19710;Dbxref=Genbank:WP_011259185.1;Name=WP_011259185.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503344.1;locus_tag=LNP58_RS19710;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_011259185.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4197963 4198364 . - . ID=gene-LNP58_RS19715;Name=LNP58_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19715;old_locus_tag=LNP58_19680 NZ_CP086372.1 GeneMarkS-2+ CDS 4197963 4198364 . - 0 ID=cds-WP_011259184.1;Parent=gene-LNP58_RS19715;Dbxref=Genbank:WP_011259184.1;Name=WP_011259184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19715;product=hypothetical protein;protein_id=WP_011259184.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4198398 4198592 . - . ID=gene-LNP58_RS19720;Name=LNP58_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19720;old_locus_tag=LNP58_19685 NZ_CP086372.1 GeneMarkS-2+ CDS 4198398 4198592 . - 0 ID=cds-WP_012445049.1;Parent=gene-LNP58_RS19720;Dbxref=Genbank:WP_012445049.1;Name=WP_012445049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19720;product=hypothetical protein;protein_id=WP_012445049.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4198663 4198995 . - . ID=gene-LNP58_RS19725;Name=LNP58_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19725;old_locus_tag=LNP58_19690 NZ_CP086372.1 Protein Homology CDS 4198663 4198995 . - 0 ID=cds-WP_069959873.1;Parent=gene-LNP58_RS19725;Dbxref=Genbank:WP_069959873.1;Name=WP_069959873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408663.1;locus_tag=LNP58_RS19725;product=hypothetical protein;protein_id=WP_069959873.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4199257 4200378 . - . ID=gene-LNP58_RS19730;Name=LNP58_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19730;old_locus_tag=LNP58_19695 NZ_CP086372.1 Protein Homology CDS 4199257 4200378 . - 0 ID=cds-WP_075242218.1;Parent=gene-LNP58_RS19730;Dbxref=Genbank:WP_075242218.1;Name=WP_075242218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300271.1;locus_tag=LNP58_RS19730;product=GNAT family N-acetyltransferase;protein_id=WP_075242218.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4200436 4201404 . - . ID=gene-LNP58_RS19735;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LNP58_RS19735;old_locus_tag=LNP58_19700 NZ_CP086372.1 Protein Homology CDS 4200436 4201404 . - 0 ID=cds-WP_011259181.1;Parent=gene-LNP58_RS19735;Dbxref=Genbank:WP_011259181.1;Name=WP_011259181.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964266.1;locus_tag=LNP58_RS19735;product=thioredoxin-disulfide reductase;protein_id=WP_011259181.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4201688 4204045 . + . ID=gene-LNP58_RS19740;Name=LNP58_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19740;old_locus_tag=LNP58_19705 NZ_CP086372.1 Protein Homology CDS 4201688 4204045 . + 0 ID=cds-WP_053504269.1;Parent=gene-LNP58_RS19740;Dbxref=Genbank:WP_053504269.1;Name=WP_053504269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172352.1;locus_tag=LNP58_RS19740;product=DNA translocase FtsK;protein_id=WP_053504269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4204208 4206142 . + . ID=gene-LNP58_RS19745;Name=LNP58_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19745;old_locus_tag=LNP58_19710 NZ_CP086372.1 Protein Homology CDS 4204208 4206142 . + 0 ID=cds-WP_075242219.1;Parent=gene-LNP58_RS19745;Dbxref=Genbank:WP_075242219.1;Name=WP_075242219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373562.1;locus_tag=LNP58_RS19745;product=DUF3857 and transglutaminase domain-containing protein;protein_id=WP_075242219.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4206207 4206878 . + . ID=gene-LNP58_RS19750;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LNP58_RS19750;old_locus_tag=LNP58_19715 NZ_CP086372.1 Protein Homology CDS 4206207 4206878 . + 0 ID=cds-WP_027703232.1;Parent=gene-LNP58_RS19750;Dbxref=Genbank:WP_027703232.1;Name=WP_027703232.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301000.1;locus_tag=LNP58_RS19750;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_027703232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4206991 4211157 . - . ID=gene-LNP58_RS19755;Name=LNP58_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19755;old_locus_tag=LNP58_19720 NZ_CP086372.1 Protein Homology CDS 4206991 4211157 . - 0 ID=cds-WP_011259177.1;Parent=gene-LNP58_RS19755;Dbxref=Genbank:WP_011259177.1;Name=WP_011259177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973390.1;locus_tag=LNP58_RS19755;product=XopZ family type III secretion system effector;protein_id=WP_011259177.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4211394 4212770 . + . ID=gene-LNP58_RS19760;Name=LNP58_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19760;old_locus_tag=LNP58_19725 NZ_CP086372.1 Protein Homology CDS 4211394 4212770 . + 0 ID=cds-WP_075242933.1;Parent=gene-LNP58_RS19760;Dbxref=Genbank:WP_075242933.1;Name=WP_075242933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303930.1;locus_tag=LNP58_RS19760;product=replication-associated recombination protein A;protein_id=WP_075242933.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4212802 4213128 . - . ID=gene-LNP58_RS19765;Name=LNP58_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19765;old_locus_tag=LNP58_19730 NZ_CP086372.1 Protein Homology CDS 4212802 4213128 . - 0 ID=cds-WP_024710736.1;Parent=gene-LNP58_RS19765;Dbxref=Genbank:WP_024710736.1;Name=WP_024710736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259175.1;locus_tag=LNP58_RS19765;product=DUF190 domain-containing protein;protein_id=WP_024710736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4213125 4213532 . - . ID=gene-LNP58_RS19770;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LNP58_RS19770;old_locus_tag=LNP58_19735 NZ_CP086372.1 Protein Homology CDS 4213125 4213532 . - 0 ID=cds-WP_033004667.1;Parent=gene-LNP58_RS19770;Dbxref=Genbank:WP_033004667.1;Name=WP_033004667.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503356.1;locus_tag=LNP58_RS19770;product=fluoride efflux transporter CrcB;protein_id=WP_033004667.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4213564 4213914 . - . ID=gene-LNP58_RS19775;Name=LNP58_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19775;old_locus_tag=LNP58_19740 NZ_CP086372.1 Protein Homology CDS 4213564 4213914 . - 0 ID=cds-WP_075242932.1;Parent=gene-LNP58_RS19775;Dbxref=Genbank:WP_075242932.1;Name=WP_075242932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408659.1;locus_tag=LNP58_RS19775;product=hypothetical protein;protein_id=WP_075242932.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4213911 4215242 . - . ID=gene-LNP58_RS19780;Name=LNP58_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19780;old_locus_tag=LNP58_19745 NZ_CP086372.1 Protein Homology CDS 4213911 4215242 . - 0 ID=cds-WP_075242931.1;Parent=gene-LNP58_RS19780;Dbxref=Genbank:WP_075242931.1;Name=WP_075242931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503359.1;locus_tag=LNP58_RS19780;product=voltage-gated chloride channel family protein;protein_id=WP_075242931.1;transl_table=11 NZ_CP086372.1 cmsearch riboswitch 4215329 4215405 . - . ID=id-NZ_CP086372.1:4215329..4215405;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP086372.1 RefSeq gene 4215563 4216768 . - . ID=gene-LNP58_RS19785;Name=LNP58_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19785;old_locus_tag=LNP58_19750 NZ_CP086372.1 Protein Homology CDS 4215563 4216768 . - 0 ID=cds-WP_053504275.1;Parent=gene-LNP58_RS19785;Dbxref=Genbank:WP_053504275.1;Name=WP_053504275.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812978.1;locus_tag=LNP58_RS19785;product=acetyl-CoA C-acyltransferase;protein_id=WP_053504275.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4216926 4219298 . - . ID=gene-LNP58_RS19790;Name=LNP58_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19790;old_locus_tag=LNP58_19755 NZ_CP086372.1 Protein Homology CDS 4216926 4219298 . - 0 ID=cds-WP_011259171.1;Parent=gene-LNP58_RS19790;Dbxref=Genbank:WP_011259171.1;Name=WP_011259171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158309.1;locus_tag=LNP58_RS19790;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_011259171.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4219323 4219955 . - . ID=gene-LNP58_RS19795;Name=LNP58_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19795;old_locus_tag=LNP58_19760 NZ_CP086372.1 Protein Homology CDS 4219323 4219955 . - 0 ID=cds-WP_011259170.1;Parent=gene-LNP58_RS19795;Dbxref=Genbank:WP_011259170.1;Name=WP_011259170.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463154.1;locus_tag=LNP58_RS19795;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011259170.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4220175 4220600 . + . ID=gene-LNP58_RS19800;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LNP58_RS19800;old_locus_tag=LNP58_19765 NZ_CP086372.1 Protein Homology CDS 4220175 4220600 . + 0 ID=cds-WP_002812972.1;Parent=gene-LNP58_RS19800;Dbxref=Genbank:WP_002812972.1;Name=WP_002812972.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=LNP58_RS19800;product=nucleoside-diphosphate kinase;protein_id=WP_002812972.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4220631 4221824 . + . ID=gene-LNP58_RS19805;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LNP58_RS19805;old_locus_tag=LNP58_19770 NZ_CP086372.1 Protein Homology CDS 4220631 4221824 . + 0 ID=cds-WP_228329755.1;Parent=gene-LNP58_RS19805;Dbxref=Genbank:WP_228329755.1;Name=WP_228329755.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914477.1;locus_tag=LNP58_RS19805;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_228329755.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4221835 4222623 . + . ID=gene-LNP58_RS19810;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LNP58_RS19810;old_locus_tag=LNP58_19775 NZ_CP086372.1 Protein Homology CDS 4221835 4222623 . + 0 ID=cds-WP_011408658.1;Parent=gene-LNP58_RS19810;Dbxref=Genbank:WP_011408658.1;Name=WP_011408658.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158306.1;locus_tag=LNP58_RS19810;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_011408658.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4222620 4223480 . + . ID=gene-LNP58_RS19815;Name=LNP58_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19815;old_locus_tag=LNP58_19780 NZ_CP086372.1 Protein Homology CDS 4222620 4223480 . + 0 ID=cds-WP_011259167.1;Parent=gene-LNP58_RS19815;Dbxref=Genbank:WP_011259167.1;Name=WP_011259167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445040.1;locus_tag=LNP58_RS19815;product=helix-turn-helix domain-containing protein;protein_id=WP_011259167.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4223551 4224189 . + . ID=gene-LNP58_RS19820;Name=LNP58_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19820;old_locus_tag=LNP58_19785 NZ_CP086372.1 Protein Homology CDS 4223551 4224189 . + 0 ID=cds-WP_011259166.1;Parent=gene-LNP58_RS19820;Dbxref=Genbank:WP_011259166.1;Name=WP_011259166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503367.1;locus_tag=LNP58_RS19820;product=tetratricopeptide repeat protein;protein_id=WP_011259166.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4224189 4225406 . + . ID=gene-LNP58_RS19825;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LNP58_RS19825;old_locus_tag=LNP58_19790 NZ_CP086372.1 Protein Homology CDS 4224189 4225406 . + 0 ID=cds-WP_011408657.1;Parent=gene-LNP58_RS19825;Dbxref=Genbank:WP_011408657.1;Name=WP_011408657.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963809.1;locus_tag=LNP58_RS19825;product=outer membrane protein assembly factor BamB;protein_id=WP_011408657.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4225417 4226814 . + . ID=gene-LNP58_RS19830;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LNP58_RS19830;old_locus_tag=LNP58_19795 NZ_CP086372.1 Protein Homology CDS 4225417 4226814 . + 0 ID=cds-WP_011259164.1;Parent=gene-LNP58_RS19830;Dbxref=Genbank:WP_011259164.1;Name=WP_011259164.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904421.1;locus_tag=LNP58_RS19830;product=ribosome biogenesis GTPase Der;protein_id=WP_011259164.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4227129 4228349 . + . ID=gene-LNP58_RS19835;Name=LNP58_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19835;old_locus_tag=LNP58_19800 NZ_CP086372.1 Protein Homology CDS 4227129 4228349 . + 0 ID=cds-WP_011259163.1;Parent=gene-LNP58_RS19835;Dbxref=Genbank:WP_011259163.1;Name=WP_011259163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160125.1;locus_tag=LNP58_RS19835;product=molybdopterin molybdotransferase MoeA;protein_id=WP_011259163.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4228404 4228480 . - . ID=gene-LNP58_RS19840;Name=LNP58_RS19840;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS19840;old_locus_tag=LNP58_19805 NZ_CP086372.1 cmsearch ncRNA 4228404 4228480 . - . ID=rna-LNP58_RS19840;Parent=gene-LNP58_RS19840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19840;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4228404 4228480 . - . ID=exon-LNP58_RS19840-1;Parent=rna-LNP58_RS19840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19840;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4228464 4228537 . + . ID=gene-LNP58_RS19845;Name=LNP58_RS19845;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS19845;old_locus_tag=LNP58_19810 NZ_CP086372.1 cmsearch ncRNA 4228464 4228537 . + . ID=rna-LNP58_RS19845;Parent=gene-LNP58_RS19845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19845;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4228464 4228537 . + . ID=exon-LNP58_RS19845-1;Parent=rna-LNP58_RS19845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19845;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 4228546 4229604 . - . ID=gene-LNP58_RS19850;Name=LNP58_RS19850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19850;old_locus_tag=LNP58_19815;pseudo=true NZ_CP086372.1 Protein Homology CDS 4228546 4229604 . - 0 ID=cds-LNP58_RS19850;Parent=gene-LNP58_RS19850;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=LNP58_RS19850;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4229984 4230148 . + . ID=gene-LNP58_RS19855;Name=LNP58_RS19855;end_range=4230148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19855;old_locus_tag=LNP58_19820;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4229984 4230148 . + 0 ID=cds-LNP58_RS19855;Parent=gene-LNP58_RS19855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4230148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS19855;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4230347 4230625 . + . ID=gene-LNP58_RS19865;Name=LNP58_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19865;old_locus_tag=LNP58_19825 NZ_CP086372.1 GeneMarkS-2+ CDS 4230347 4230625 . + 0 ID=cds-WP_229001952.1;Parent=gene-LNP58_RS19865;Dbxref=Genbank:WP_229001952.1;Name=WP_229001952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS19865;product=hypothetical protein;protein_id=WP_229001952.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4230720 4231688 . - . ID=gene-LNP58_RS19870;Name=LNP58_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19870;old_locus_tag=LNP58_19830 NZ_CP086372.1 Protein Homology CDS 4230720 4231688 . - 0 ID=cds-WP_011257031.1-6;Parent=gene-LNP58_RS19870;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS19870;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4231753 4232406 . + . ID=gene-LNP58_RS19875;Name=LNP58_RS19875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19875;old_locus_tag=LNP58_19835;partial=true;pseudo=true;start_range=.,4231753 NZ_CP086372.1 Protein Homology CDS 4231753 4232406 . + 0 ID=cds-LNP58_RS19875;Parent=gene-LNP58_RS19875;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=LNP58_RS19875;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,4231753;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4232492 4233704 . - . ID=gene-LNP58_RS19880;Name=LNP58_RS19880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19880;old_locus_tag=LNP58_19840;pseudo=true NZ_CP086372.1 Protein Homology CDS 4232492 4233704 . - 0 ID=cds-LNP58_RS19880;Parent=gene-LNP58_RS19880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS19880;product=IS4-like element ISXo14 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4233819 4234186 . + . ID=gene-LNP58_RS19885;Name=LNP58_RS19885;end_range=4234186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19885;old_locus_tag=LNP58_19845;partial=true;pseudo=true;start_range=.,4233819 NZ_CP086372.1 Protein Homology CDS 4233819 4234186 . + 0 ID=cds-LNP58_RS19885;Parent=gene-LNP58_RS19885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4234186,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19885;partial=true;product=transposase;pseudo=true;start_range=.,4233819;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4234312 4235657 . + . ID=gene-LNP58_RS19890;Name=LNP58_RS19890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19890;old_locus_tag=LNP58_19850;pseudo=true NZ_CP086372.1 Protein Homology CDS 4234312 4235657 . + 0 ID=cds-LNP58_RS19890;Parent=gene-LNP58_RS19890;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS19890;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4235681 4236646 . - . ID=gene-LNP58_RS19895;Name=LNP58_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19895;old_locus_tag=LNP58_19855 NZ_CP086372.1 Protein Homology CDS 4235681 4236646 . - 0 ID=cds-WP_109181957.1;Parent=gene-LNP58_RS19895;Dbxref=Genbank:WP_109181957.1;Name=WP_109181957.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS19895;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181957.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4236735 4236926 . + . ID=gene-LNP58_RS19900;Name=LNP58_RS19900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19900;old_locus_tag=LNP58_19860;partial=true;pseudo=true;start_range=.,4236735 NZ_CP086372.1 Protein Homology CDS 4236735 4236926 . + 0 ID=cds-LNP58_RS19900;Parent=gene-LNP58_RS19900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19900;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4236735;transl_table=11 NZ_CP086372.1 RefSeq gene 4236923 4238062 . - . ID=gene-LNP58_RS19905;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=LNP58_RS19905;old_locus_tag=LNP58_19865 NZ_CP086372.1 Protein Homology CDS 4236923 4238062 . - 0 ID=cds-WP_011259151.1;Parent=gene-LNP58_RS19905;Dbxref=Genbank:WP_011259151.1;Name=WP_011259151.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259151.1;locus_tag=LNP58_RS19905;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_011259151.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4238314 4239633 . - . ID=gene-LNP58_RS19910;Name=LNP58_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19910;old_locus_tag=LNP58_19870 NZ_CP086372.1 Protein Homology CDS 4238314 4239633 . - 0 ID=cds-WP_109181956.1;Parent=gene-LNP58_RS19910;Dbxref=Genbank:WP_109181956.1;Name=WP_109181956.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS19910;product=IS701 family transposase;protein_id=WP_109181956.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4239731 4240788 . + . ID=gene-LNP58_RS19915;Name=LNP58_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19915;old_locus_tag=LNP58_19875 NZ_CP086372.1 Protein Homology CDS 4239731 4240307 . + 0 ID=cds-WP_109181955.1;Parent=gene-LNP58_RS19915;Dbxref=Genbank:WP_109181955.1;Name=WP_109181955.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=LNP58_RS19915;product=IS630 family transposase;protein_id=WP_109181955.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4240307 4240788 . + 2 ID=cds-WP_109181955.1;Parent=gene-LNP58_RS19915;Dbxref=Genbank:WP_109181955.1;Name=WP_109181955.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=LNP58_RS19915;product=IS630 family transposase;protein_id=WP_109181955.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4240876 4242780 . - . ID=gene-LNP58_RS19920;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LNP58_RS19920;old_locus_tag=LNP58_19880 NZ_CP086372.1 Protein Homology CDS 4240876 4242780 . - 0 ID=cds-WP_011408651.1;Parent=gene-LNP58_RS19920;Dbxref=Genbank:WP_011408651.1;Name=WP_011408651.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303855.1;locus_tag=LNP58_RS19920;product=molecular chaperone HtpG;protein_id=WP_011408651.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4242955 4243641 . + . ID=gene-LNP58_RS19925;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LNP58_RS19925;old_locus_tag=LNP58_19885 NZ_CP086372.1 Protein Homology CDS 4242955 4243641 . + 0 ID=cds-WP_012444764.1;Parent=gene-LNP58_RS19925;Dbxref=Genbank:WP_012444764.1;Name=WP_012444764.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157278.1;locus_tag=LNP58_RS19925;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_012444764.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4243638 4244144 . + . ID=gene-LNP58_RS19930;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LNP58_RS19930;old_locus_tag=LNP58_19890 NZ_CP086372.1 Protein Homology CDS 4243638 4244144 . + 0 ID=cds-WP_011259147.1;Parent=gene-LNP58_RS19930;Dbxref=Genbank:WP_011259147.1;Name=WP_011259147.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372369.1;locus_tag=LNP58_RS19930;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_011259147.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4244191 4244688 . + . ID=gene-LNP58_RS19935;Name=LNP58_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19935;old_locus_tag=LNP58_19895 NZ_CP086372.1 Protein Homology CDS 4244191 4244688 . + 0 ID=cds-WP_027703974.1;Parent=gene-LNP58_RS19935;Dbxref=Genbank:WP_027703974.1;Name=WP_027703974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157277.1;locus_tag=LNP58_RS19935;product=hypothetical protein;protein_id=WP_027703974.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4244920 4245204 . + . ID=gene-LNP58_RS19940;Name=LNP58_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19940;old_locus_tag=LNP58_19900 NZ_CP086372.1 Protein Homology CDS 4244920 4245204 . + 0 ID=cds-WP_012444765.1;Parent=gene-LNP58_RS19940;Dbxref=Genbank:WP_012444765.1;Name=WP_012444765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502923.1;locus_tag=LNP58_RS19940;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_012444765.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4245201 4246994 . + . ID=gene-LNP58_RS19945;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LNP58_RS19945;old_locus_tag=LNP58_19905 NZ_CP086372.1 Protein Homology CDS 4245201 4246994 . + 0 ID=cds-WP_011408648.1;Parent=gene-LNP58_RS19945;Dbxref=Genbank:WP_011408648.1;Name=WP_011408648.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408648.1;locus_tag=LNP58_RS19945;product=gamma-glutamyltransferase;protein_id=WP_011408648.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4247001 4248032 . - . ID=gene-LNP58_RS19950;Name=LNP58_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19950;old_locus_tag=LNP58_19910 NZ_CP086372.1 Protein Homology CDS 4247001 4248032 . - 0 ID=cds-WP_011259143.1;Parent=gene-LNP58_RS19950;Dbxref=Genbank:WP_011259143.1;Name=WP_011259143.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=LNP58_RS19950;product=IS630 family transposase;protein_id=WP_011259143.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4248312 4249075 . - . ID=gene-LNP58_RS19955;Name=LNP58_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19955;old_locus_tag=LNP58_19915 NZ_CP086372.1 Protein Homology CDS 4248760 4249075 . - 0 ID=cds-WP_094187715.1-11;Parent=gene-LNP58_RS19955;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19955;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4248312 4248760 . - 2 ID=cds-WP_094187715.1-11;Parent=gene-LNP58_RS19955;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS19955;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4249379 4249454 . + . ID=gene-LNP58_RS19960;Name=LNP58_RS19960;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS19960;old_locus_tag=LNP58_19920 NZ_CP086372.1 cmsearch ncRNA 4249379 4249454 . + . ID=rna-LNP58_RS19960;Parent=gene-LNP58_RS19960;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19960;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4249379 4249454 . + . ID=exon-LNP58_RS19960-1;Parent=rna-LNP58_RS19960;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS19960;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4249472 4250104 . - . ID=gene-LNP58_RS19965;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LNP58_RS19965;old_locus_tag=LNP58_19925 NZ_CP086372.1 Protein Homology CDS 4249472 4250104 . - 0 ID=cds-WP_011259142.1;Parent=gene-LNP58_RS19965;Dbxref=Genbank:WP_011259142.1;Name=WP_011259142.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116260.1;locus_tag=LNP58_RS19965;product=uracil phosphoribosyltransferase;protein_id=WP_011259142.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4250255 4250605 . + . ID=gene-LNP58_RS19970;Name=LNP58_RS19970;end_range=4250605,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19970;old_locus_tag=LNP58_19930;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4250255 4250605 . + 0 ID=cds-LNP58_RS19970;Parent=gene-LNP58_RS19970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4250605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502926.1;locus_tag=LNP58_RS19970;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4250767 4252998 . + . ID=gene-LNP58_RS19975;Name=LNP58_RS19975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19975;old_locus_tag=LNP58_19935;partial=true;pseudo=true;start_range=.,4250767 NZ_CP086372.1 Protein Homology CDS 4250767 4252998 . + 0 ID=cds-LNP58_RS19975;Parent=gene-LNP58_RS19975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502926.1;locus_tag=LNP58_RS19975;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,4250767;transl_table=11 NZ_CP086372.1 RefSeq gene 4252995 4254116 . + . ID=gene-LNP58_RS19980;Name=LNP58_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS19980;old_locus_tag=LNP58_19940 NZ_CP086372.1 Protein Homology CDS 4252995 4254116 . + 0 ID=cds-WP_011259140.1;Parent=gene-LNP58_RS19980;Dbxref=Genbank:WP_011259140.1;Name=WP_011259140.1;Ontology_term=GO:0016158;gbkey=CDS;go_function=3-phytase activity|0016158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851231.1;locus_tag=LNP58_RS19980;product=phytase;protein_id=WP_011259140.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4254113 4254784 . + . ID=gene-LNP58_RS19985;Name=LNP58_RS19985;end_range=4254784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19985;old_locus_tag=LNP58_19945;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4254113 4254784 . + 0 ID=cds-LNP58_RS19985;Parent=gene-LNP58_RS19985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4254784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=LNP58_RS19985;partial=true;product=fibronectin type III domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4254804 4256180 . - . ID=gene-LNP58_RS19990;Name=LNP58_RS19990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19990;old_locus_tag=LNP58_19950;pseudo=true NZ_CP086372.1 Protein Homology CDS 4254804 4256180 . - 0 ID=cds-LNP58_RS19990;Parent=gene-LNP58_RS19990;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS19990;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4256298 4257080 . + . ID=gene-LNP58_RS19995;Name=LNP58_RS19995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS19995;old_locus_tag=LNP58_19955;partial=true;pseudo=true;start_range=.,4256298 NZ_CP086372.1 Protein Homology CDS 4256298 4257080 . + 0 ID=cds-LNP58_RS19995;Parent=gene-LNP58_RS19995;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=LNP58_RS19995;partial=true;product=metallophosphoesterase;pseudo=true;start_range=.,4256298;transl_table=11 NZ_CP086372.1 RefSeq gene 4257471 4258178 . + . ID=gene-LNP58_RS20000;Name=LNP58_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20000;old_locus_tag=LNP58_19960 NZ_CP086372.1 Protein Homology CDS 4257471 4258178 . + 0 ID=cds-WP_011259129.1;Parent=gene-LNP58_RS20000;Dbxref=Genbank:WP_011259129.1;Name=WP_011259129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157269.1;locus_tag=LNP58_RS20000;product=glycosyltransferase;protein_id=WP_011259129.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4258523 4260019 . - . ID=gene-LNP58_RS20005;Name=LNP58_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20005;old_locus_tag=LNP58_19965 NZ_CP086372.1 Protein Homology CDS 4258523 4260019 . - 0 ID=cds-WP_011259128.1;Parent=gene-LNP58_RS20005;Dbxref=Genbank:WP_011259128.1;Name=WP_011259128.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438074.1;locus_tag=LNP58_RS20005;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_011259128.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4260143 4260574 . + . ID=gene-LNP58_RS20010;Name=LNP58_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20010;old_locus_tag=LNP58_19970 NZ_CP086372.1 Protein Homology CDS 4260143 4260574 . + 0 ID=cds-WP_011259127.1;Parent=gene-LNP58_RS20010;Dbxref=Genbank:WP_011259127.1;Name=WP_011259127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489775.1;locus_tag=LNP58_RS20010;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011259127.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4260740 4261810 . + . ID=gene-LNP58_RS20015;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LNP58_RS20015;old_locus_tag=LNP58_19975 NZ_CP086372.1 Protein Homology CDS 4260740 4261810 . + 0 ID=cds-WP_027703908.1;Parent=gene-LNP58_RS20015;Dbxref=Genbank:WP_027703908.1;Name=WP_027703908.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037521.1;locus_tag=LNP58_RS20015;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_027703908.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4261880 4263025 . + . ID=gene-LNP58_RS20020;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LNP58_RS20020;old_locus_tag=LNP58_19980 NZ_CP086372.1 Protein Homology CDS 4261880 4263025 . + 0 ID=cds-WP_011259125.1;Parent=gene-LNP58_RS20020;Dbxref=Genbank:WP_011259125.1;Name=WP_011259125.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157264.1;locus_tag=LNP58_RS20020;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_011259125.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4263157 4263510 . + . ID=gene-LNP58_RS20025;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LNP58_RS20025;old_locus_tag=LNP58_19985 NZ_CP086372.1 Protein Homology CDS 4263157 4263510 . + 0 ID=cds-WP_011259124.1;Parent=gene-LNP58_RS20025;Dbxref=Genbank:WP_011259124.1;Name=WP_011259124.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157263.1;locus_tag=LNP58_RS20025;product=preprotein translocase subunit YajC;protein_id=WP_011259124.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4263707 4265551 . + . ID=gene-LNP58_RS20030;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LNP58_RS20030;old_locus_tag=LNP58_19990 NZ_CP086372.1 Protein Homology CDS 4263707 4265551 . + 0 ID=cds-WP_011259123.1;Parent=gene-LNP58_RS20030;Dbxref=Genbank:WP_011259123.1;Name=WP_011259123.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=LNP58_RS20030;product=protein translocase subunit SecD;protein_id=WP_011259123.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4265646 4266614 . + . ID=gene-LNP58_RS20035;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LNP58_RS20035;old_locus_tag=LNP58_19995 NZ_CP086372.1 Protein Homology CDS 4265646 4266614 . + 0 ID=cds-WP_011259122.1;Parent=gene-LNP58_RS20035;Dbxref=Genbank:WP_011259122.1;Name=WP_011259122.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438079.1;locus_tag=LNP58_RS20035;product=protein translocase subunit SecF;protein_id=WP_011259122.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4266695 4267057 . - . ID=gene-LNP58_RS20040;Name=LNP58_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20040;old_locus_tag=LNP58_20000 NZ_CP086372.1 Protein Homology CDS 4266695 4267057 . - 0 ID=cds-WP_080496440.1;Parent=gene-LNP58_RS20040;Dbxref=Genbank:WP_080496440.1;Name=WP_080496440.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408636.1;locus_tag=LNP58_RS20040;product=phage integrase N-terminal SAM-like domain-containing protein;protein_id=WP_080496440.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4267325 4268248 . + . ID=gene-LNP58_RS20045;Name=LNP58_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20045;old_locus_tag=LNP58_20005 NZ_CP086372.1 Protein Homology CDS 4267325 4268248 . + 0 ID=cds-WP_011408635.1;Parent=gene-LNP58_RS20045;Dbxref=Genbank:WP_011408635.1;Name=WP_011408635.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270155.1;locus_tag=LNP58_RS20045;product=IS5 family transposase;protein_id=WP_011408635.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4268497 4269462 . + . ID=gene-LNP58_RS20050;Name=LNP58_RS20050;end_range=4269462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20050;old_locus_tag=LNP58_20010;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4268497 4269462 . + 0 ID=cds-LNP58_RS20050;Parent=gene-LNP58_RS20050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4269462,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1;locus_tag=LNP58_RS20050;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4269462 4269644 . + . ID=gene-LNP58_RS20055;Name=LNP58_RS20055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20055;old_locus_tag=LNP58_20015;partial=true;pseudo=true;start_range=.,4269462 NZ_CP086372.1 Protein Homology CDS 4269462 4269644 . + 0 ID=cds-LNP58_RS20055;Parent=gene-LNP58_RS20055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS20055;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,4269462;transl_table=11 NZ_CP086372.1 RefSeq gene 4269745 4271064 . - . ID=gene-LNP58_RS20060;Name=LNP58_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20060;old_locus_tag=LNP58_20020 NZ_CP086372.1 Protein Homology CDS 4269745 4271064 . - 0 ID=cds-WP_109181954.1;Parent=gene-LNP58_RS20060;Dbxref=Genbank:WP_109181954.1;Name=WP_109181954.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS20060;product=IS701 family transposase;protein_id=WP_109181954.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4271314 4272500 . - . ID=gene-LNP58_RS20065;Name=LNP58_RS20065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20065;old_locus_tag=LNP58_20025;pseudo=true NZ_CP086372.1 Protein Homology CDS 4271314 4272500 . - 0 ID=cds-LNP58_RS20065;Parent=gene-LNP58_RS20065;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS20065;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4272551 4273701 . + . ID=gene-LNP58_RS20070;Name=LNP58_RS20070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20070;old_locus_tag=LNP58_20030;pseudo=true NZ_CP086372.1 Protein Homology CDS 4272551 4273701 . + 0 ID=cds-LNP58_RS20070;Parent=gene-LNP58_RS20070;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS20070;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4273849 4275168 . - . ID=gene-LNP58_RS20075;Name=LNP58_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20075;old_locus_tag=LNP58_20035 NZ_CP086372.1 Protein Homology CDS 4273849 4275168 . - 0 ID=cds-WP_011408631.1;Parent=gene-LNP58_RS20075;Dbxref=Genbank:WP_011408631.1;Name=WP_011408631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS20075;product=IS701-like element ISXo15 family transposase;protein_id=WP_011408631.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4275239 4275874 . - . ID=gene-LNP58_RS20080;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LNP58_RS20080;old_locus_tag=LNP58_20040 NZ_CP086372.1 Protein Homology CDS 4275239 4275874 . - 0 ID=cds-WP_075242303.1;Parent=gene-LNP58_RS20080;Dbxref=Genbank:WP_075242303.1;Name=WP_075242303.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036706.1;locus_tag=LNP58_RS20080;product=ribonuclease T;protein_id=WP_075242303.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4276158 4276565 . - . ID=gene-LNP58_RS20085;Name=LNP58_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20085;old_locus_tag=LNP58_20045 NZ_CP086372.1 Protein Homology CDS 4276158 4276565 . - 0 ID=cds-WP_011259116.1;Parent=gene-LNP58_RS20085;Dbxref=Genbank:WP_011259116.1;Name=WP_011259116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160317.1;locus_tag=LNP58_RS20085;product=RcnB family protein;protein_id=WP_011259116.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4276698 4277408 . - . ID=gene-LNP58_RS20090;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LNP58_RS20090;old_locus_tag=LNP58_20050 NZ_CP086372.1 Protein Homology CDS 4276698 4277408 . - 0 ID=cds-WP_011408630.1;Parent=gene-LNP58_RS20090;Dbxref=Genbank:WP_011408630.1;Name=WP_011408630.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994733.1;locus_tag=LNP58_RS20090;product=phosphate signaling complex protein PhoU;protein_id=WP_011408630.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4277537 4278367 . - . ID=gene-LNP58_RS20095;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LNP58_RS20095;old_locus_tag=LNP58_20055 NZ_CP086372.1 Protein Homology CDS 4277537 4278367 . - 0 ID=cds-WP_011259114.1;Parent=gene-LNP58_RS20095;Dbxref=Genbank:WP_011259114.1;Name=WP_011259114.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237787.1;locus_tag=LNP58_RS20095;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_011259114.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4278390 4279259 . - . ID=gene-LNP58_RS20100;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LNP58_RS20100;old_locus_tag=LNP58_20060 NZ_CP086372.1 Protein Homology CDS 4278390 4279259 . - 0 ID=cds-WP_069959865.1;Parent=gene-LNP58_RS20100;Dbxref=Genbank:WP_069959865.1;Name=WP_069959865.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155848.1;locus_tag=LNP58_RS20100;product=phosphate ABC transporter permease PstA;protein_id=WP_069959865.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4279259 4280233 . - . ID=gene-LNP58_RS20105;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LNP58_RS20105;old_locus_tag=LNP58_20065 NZ_CP086372.1 Protein Homology CDS 4279259 4280233 . - 0 ID=cds-WP_069959864.1;Parent=gene-LNP58_RS20105;Dbxref=Genbank:WP_069959864.1;Name=WP_069959864.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572163.1;locus_tag=LNP58_RS20105;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_069959864.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4280346 4281437 . - . ID=gene-LNP58_RS20110;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LNP58_RS20110;old_locus_tag=LNP58_20070 NZ_CP086372.1 Protein Homology CDS 4280346 4281437 . - 0 ID=cds-WP_011408626.1;Parent=gene-LNP58_RS20110;Dbxref=Genbank:WP_011408626.1;Name=WP_011408626.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966222.1;locus_tag=LNP58_RS20110;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_011408626.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4281625 4282644 . - . ID=gene-LNP58_RS20115;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LNP58_RS20115;old_locus_tag=LNP58_20075 NZ_CP086372.1 Protein Homology CDS 4281625 4282644 . - 0 ID=cds-WP_011408625.1;Parent=gene-LNP58_RS20115;Dbxref=Genbank:WP_011408625.1;Name=WP_011408625.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408625.1;locus_tag=LNP58_RS20115;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_011408625.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4282833 4284083 . - . ID=gene-LNP58_RS20120;Name=LNP58_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20120;old_locus_tag=LNP58_20080 NZ_CP086372.1 Protein Homology CDS 4282833 4284083 . - 0 ID=cds-WP_011259109.1;Parent=gene-LNP58_RS20120;Dbxref=Genbank:WP_011259109.1;Name=WP_011259109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036714.1;locus_tag=LNP58_RS20120;product=OprO/OprP family phosphate-selective porin;protein_id=WP_011259109.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4284423 4284743 . + . ID=gene-LNP58_RS20125;Name=LNP58_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20125;old_locus_tag=LNP58_20085 NZ_CP086372.1 Protein Homology CDS 4284423 4284743 . + 0 ID=cds-WP_041182144.1;Parent=gene-LNP58_RS20125;Dbxref=Genbank:WP_041182144.1;Name=WP_041182144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155852.1;locus_tag=LNP58_RS20125;product=hypothetical protein;protein_id=WP_041182144.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4284917 4285290 . + . ID=gene-LNP58_RS20130;Name=LNP58_RS20130;end_range=4285290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20130;old_locus_tag=LNP58_20090;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4284917 4285290 . + 0 ID=cds-LNP58_RS20130;Parent=gene-LNP58_RS20130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4285290,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS20130;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4285307 4286542 . - . ID=gene-LNP58_RS20135;Name=LNP58_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20135;old_locus_tag=LNP58_20095 NZ_CP086372.1 Protein Homology CDS 4285307 4286542 . - 0 ID=cds-WP_011408623.1-2;Parent=gene-LNP58_RS20135;Dbxref=Genbank:WP_011408623.1;Name=WP_011408623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS20135;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011408623.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4286605 4287000 . + . ID=gene-LNP58_RS20140;Name=LNP58_RS20140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20140;old_locus_tag=LNP58_20100;partial=true;pseudo=true;start_range=.,4286605 NZ_CP086372.1 Protein Homology CDS 4286605 4287000 . + 0 ID=cds-LNP58_RS20140;Parent=gene-LNP58_RS20140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS20140;partial=true;product=transposase;pseudo=true;start_range=.,4286605;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4287007 4287081 . + . ID=gene-LNP58_RS20145;Name=LNP58_RS20145;end_range=4287081,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20145;old_locus_tag=LNP58_20105;partial=true;pseudo=true;start_range=.,4287007 NZ_CP086372.1 Protein Homology CDS 4287007 4287081 . + 0 ID=cds-LNP58_RS20145;Parent=gene-LNP58_RS20145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4287081,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366497.1;locus_tag=LNP58_RS20145;partial=true;product=carbonic anhydrase;pseudo=true;start_range=.,4287007;transl_table=11 NZ_CP086372.1 RefSeq gene 4287147 4288115 . + . ID=gene-LNP58_RS20150;Name=LNP58_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20150;old_locus_tag=LNP58_20110 NZ_CP086372.1 Protein Homology CDS 4287147 4288115 . + 0 ID=cds-WP_011258802.1-17;Parent=gene-LNP58_RS20150;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS20150;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4288245 4288835 . + . ID=gene-LNP58_RS20155;Name=LNP58_RS20155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20155;old_locus_tag=LNP58_20115;partial=true;pseudo=true;start_range=.,4288245 NZ_CP086372.1 Protein Homology CDS 4288245 4288835 . + 0 ID=cds-LNP58_RS20155;Parent=gene-LNP58_RS20155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366497.1;locus_tag=LNP58_RS20155;partial=true;product=carbonic anhydrase;pseudo=true;start_range=.,4288245;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4288899 4289453 . + . ID=gene-LNP58_RS20160;Name=LNP58_RS20160;end_range=4289453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20160;old_locus_tag=LNP58_20120;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4288899 4289453 . + 0 ID=cds-LNP58_RS20160;Parent=gene-LNP58_RS20160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008272,GO:0015116,GO:0016020;end_range=4289453,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: protein motif:HMM:NF013109.2;locus_tag=LNP58_RS20160;partial=true;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4289707 4289943 . + . ID=gene-LNP58_RS20165;Name=LNP58_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20165;old_locus_tag=LNP58_20125 NZ_CP086372.1 Protein Homology CDS 4289707 4289943 . + 0 ID=cds-WP_229001910.1;Parent=gene-LNP58_RS20165;Dbxref=Genbank:WP_229001910.1;Name=WP_229001910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024857.2;locus_tag=LNP58_RS20165;product=hypothetical protein;protein_id=WP_229001910.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4290146 4290856 . - . ID=gene-LNP58_RS20170;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LNP58_RS20170;old_locus_tag=LNP58_20130 NZ_CP086372.1 Protein Homology CDS 4290146 4290856 . - 0 ID=cds-WP_011259107.1;Parent=gene-LNP58_RS20170;Dbxref=Genbank:WP_011259107.1;Name=WP_011259107.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502811.1;locus_tag=LNP58_RS20170;product=endonuclease III;protein_id=WP_011259107.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4290853 4291233 . - . ID=gene-LNP58_RS20175;Name=LNP58_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20175;old_locus_tag=LNP58_20135 NZ_CP086372.1 Protein Homology CDS 4290853 4291233 . - 0 ID=cds-WP_011408619.1;Parent=gene-LNP58_RS20175;Dbxref=Genbank:WP_011408619.1;Name=WP_011408619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502812.1;locus_tag=LNP58_RS20175;product=hypothetical protein;protein_id=WP_011408619.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4291242 4292024 . - . ID=gene-LNP58_RS20180;Name=LNP58_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20180;old_locus_tag=LNP58_20140 NZ_CP086372.1 Protein Homology CDS 4291242 4292024 . - 0 ID=cds-WP_011408618.1;Parent=gene-LNP58_RS20180;Dbxref=Genbank:WP_011408618.1;Name=WP_011408618.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966234.1;locus_tag=LNP58_RS20180;product=enoyl-CoA hydratase-related protein;protein_id=WP_011408618.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4292188 4292886 . + . ID=gene-LNP58_RS20185;Name=LNP58_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20185;old_locus_tag=LNP58_20145 NZ_CP086372.1 Protein Homology CDS 4292188 4292886 . + 0 ID=cds-WP_011408617.1;Parent=gene-LNP58_RS20185;Dbxref=Genbank:WP_011408617.1;Name=WP_011408617.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804447.1;locus_tag=LNP58_RS20185;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011408617.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4292879 4293190 . - . ID=gene-LNP58_RS20190;Name=LNP58_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20190;old_locus_tag=LNP58_20150 NZ_CP086372.1 GeneMarkS-2+ CDS 4292879 4293190 . - 0 ID=cds-WP_228383600.1;Parent=gene-LNP58_RS20190;Dbxref=Genbank:WP_228383600.1;Name=WP_228383600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS20190;product=hypothetical protein;protein_id=WP_228383600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4293137 4293844 . + . ID=gene-LNP58_RS20195;Name=LNP58_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20195;old_locus_tag=LNP58_20155 NZ_CP086372.1 Protein Homology CDS 4293137 4293844 . + 0 ID=cds-WP_229001911.1;Parent=gene-LNP58_RS20195;Dbxref=Genbank:WP_229001911.1;Name=WP_229001911.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502816.1;locus_tag=LNP58_RS20195;product=CoA pyrophosphatase;protein_id=WP_229001911.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4293841 4294713 . + . ID=gene-LNP58_RS20200;Name=LNP58_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20200;old_locus_tag=LNP58_20160 NZ_CP086372.1 Protein Homology CDS 4293841 4294713 . + 0 ID=cds-WP_011259102.1;Parent=gene-LNP58_RS20200;Dbxref=Genbank:WP_011259102.1;Name=WP_011259102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926214.1;locus_tag=LNP58_RS20200;product=sulfurtransferase;protein_id=WP_011259102.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4294802 4295755 . + . ID=gene-LNP58_RS20205;Name=LNP58_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20205;old_locus_tag=LNP58_20165 NZ_CP086372.1 Protein Homology CDS 4294802 4295755 . + 0 ID=cds-WP_011259101.1;Parent=gene-LNP58_RS20205;Dbxref=Genbank:WP_011259101.1;Name=WP_011259101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429239.1;locus_tag=LNP58_RS20205;product=DUF1684 domain-containing protein;protein_id=WP_011259101.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4295832 4296407 . - . ID=gene-LNP58_RS20210;Name=LNP58_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20210;old_locus_tag=LNP58_20170 NZ_CP086372.1 Protein Homology CDS 4295832 4296407 . - 0 ID=cds-WP_011408613.1;Parent=gene-LNP58_RS20210;Dbxref=Genbank:WP_011408613.1;Name=WP_011408613.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302791.1;locus_tag=LNP58_RS20210;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011408613.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4296431 4296922 . + . ID=gene-LNP58_RS20215;Name=LNP58_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20215;old_locus_tag=LNP58_20175 NZ_CP086372.1 Protein Homology CDS 4296431 4296922 . + 0 ID=cds-WP_011408612.1;Parent=gene-LNP58_RS20215;Dbxref=Genbank:WP_011408612.1;Name=WP_011408612.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089837.1;locus_tag=LNP58_RS20215;product=MOSC domain-containing protein;protein_id=WP_011408612.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4296919 4297446 . + . ID=gene-LNP58_RS20220;Name=LNP58_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20220;old_locus_tag=LNP58_20180 NZ_CP086372.1 Protein Homology CDS 4296919 4297446 . + 0 ID=cds-WP_011259099.1;Parent=gene-LNP58_RS20220;Dbxref=Genbank:WP_011259099.1;Name=WP_011259099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966252.1;locus_tag=LNP58_RS20220;product=alpha/beta hydrolase;protein_id=WP_011259099.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4297487 4297993 . + . ID=gene-LNP58_RS20225;Name=LNP58_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20225;old_locus_tag=LNP58_20185 NZ_CP086372.1 Protein Homology CDS 4297487 4297993 . + 0 ID=cds-WP_011259098.1;Parent=gene-LNP58_RS20225;Dbxref=Genbank:WP_011259098.1;Name=WP_011259098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429248.1;locus_tag=LNP58_RS20225;product=N-acetyltransferase;protein_id=WP_011259098.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4298179 4299789 . + . ID=gene-LNP58_RS20230;Name=LNP58_RS20230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20230;old_locus_tag=LNP58_20190;pseudo=true NZ_CP086372.1 Protein Homology CDS 4298179 4299789 . + 0 ID=cds-LNP58_RS20230;Parent=gene-LNP58_RS20230;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160314.1;locus_tag=LNP58_RS20230;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4299768 4299959 . + . ID=gene-LNP58_RS20235;Name=LNP58_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20235;old_locus_tag=LNP58_20195 NZ_CP086372.1 Protein Homology CDS 4299768 4299959 . + 0 ID=cds-WP_027703372.1;Parent=gene-LNP58_RS20235;Dbxref=Genbank:WP_027703372.1;Name=WP_027703372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155866.1;locus_tag=LNP58_RS20235;product=hypothetical protein;protein_id=WP_027703372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4299956 4302091 . + . ID=gene-LNP58_RS20240;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LNP58_RS20240;old_locus_tag=LNP58_20200 NZ_CP086372.1 Protein Homology CDS 4299956 4302091 . + 0 ID=cds-WP_011408610.1;Parent=gene-LNP58_RS20240;Dbxref=Genbank:WP_011408610.1;Name=WP_011408610.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902459.1;locus_tag=LNP58_RS20240;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_011408610.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4302301 4302377 . + . ID=gene-LNP58_RS20245;Name=LNP58_RS20245;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS20245;old_locus_tag=LNP58_20205 NZ_CP086372.1 cmsearch ncRNA 4302301 4302377 . + . ID=rna-LNP58_RS20245;Parent=gene-LNP58_RS20245;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20245;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4302301 4302377 . + . ID=exon-LNP58_RS20245-1;Parent=rna-LNP58_RS20245;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20245;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4302575 4303351 . + . ID=gene-LNP58_RS20250;Name=LNP58_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20250;old_locus_tag=LNP58_20210 NZ_CP086372.1 Protein Homology CDS 4302575 4303351 . + 0 ID=cds-WP_011408609.1;Parent=gene-LNP58_RS20250;Dbxref=Genbank:WP_011408609.1;Name=WP_011408609.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919766.1;locus_tag=LNP58_RS20250;product=NAD kinase;protein_id=WP_011408609.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4303519 4304475 . + . ID=gene-LNP58_RS20255;Name=LNP58_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20255;old_locus_tag=LNP58_20215 NZ_CP086372.1 Protein Homology CDS 4303519 4304475 . + 0 ID=cds-WP_011259093.1;Parent=gene-LNP58_RS20255;Dbxref=Genbank:WP_011259093.1;Name=WP_011259093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366538.1;locus_tag=LNP58_RS20255;product=5'-nucleotidase;protein_id=WP_011259093.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4304496 4305056 . - . ID=gene-LNP58_RS20260;Name=LNP58_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20260;old_locus_tag=LNP58_20220 NZ_CP086372.1 Protein Homology CDS 4304496 4305056 . - 0 ID=cds-WP_011259092.1;Parent=gene-LNP58_RS20260;Dbxref=Genbank:WP_011259092.1;Name=WP_011259092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259092.1;locus_tag=LNP58_RS20260;product=DUF2939 domain-containing protein;protein_id=WP_011259092.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4305098 4306117 . - . ID=gene-LNP58_RS20265;Name=LNP58_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20265;old_locus_tag=LNP58_20225 NZ_CP086372.1 Protein Homology CDS 4305098 4306117 . - 0 ID=cds-WP_011259091.1;Parent=gene-LNP58_RS20265;Dbxref=Genbank:WP_011259091.1;Name=WP_011259091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304892.1;locus_tag=LNP58_RS20265;product=aldo/keto reductase;protein_id=WP_011259091.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4306090 4306776 . - . ID=gene-LNP58_RS20270;Name=LNP58_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20270;old_locus_tag=LNP58_20230 NZ_CP086372.1 Protein Homology CDS 4306090 4306776 . - 0 ID=cds-WP_011259090.1;Parent=gene-LNP58_RS20270;Dbxref=Genbank:WP_011259090.1;Name=WP_011259090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996685.1;locus_tag=LNP58_RS20270;product=DUF2461 domain-containing protein;protein_id=WP_011259090.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4306773 4308218 . - . ID=gene-LNP58_RS20275;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LNP58_RS20275;old_locus_tag=LNP58_20235 NZ_CP086372.1 Protein Homology CDS 4306773 4308218 . - 0 ID=cds-WP_011259089.1;Parent=gene-LNP58_RS20275;Dbxref=Genbank:WP_011259089.1;Name=WP_011259089.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366550.1;locus_tag=LNP58_RS20275;product=exodeoxyribonuclease I;protein_id=WP_011259089.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4308522 4309889 . - . ID=gene-LNP58_RS20280;Name=LNP58_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20280;old_locus_tag=LNP58_20240 NZ_CP086372.1 Protein Homology CDS 4308522 4309889 . - 0 ID=cds-WP_011408607.1;Parent=gene-LNP58_RS20280;Dbxref=Genbank:WP_011408607.1;Name=WP_011408607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576314.1;locus_tag=LNP58_RS20280;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011408607.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4310061 4311332 . - . ID=gene-LNP58_RS20285;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=LNP58_RS20285;old_locus_tag=LNP58_20245 NZ_CP086372.1 Protein Homology CDS 4310061 4311332 . - 0 ID=cds-WP_011408606.1;Parent=gene-LNP58_RS20285;Dbxref=Genbank:WP_011408606.1;Name=WP_011408606.1;Ontology_term=GO:0019441,GO:0030429;gbkey=CDS;gene=kynU;go_function=kynureninase activity|0030429||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966269.1;locus_tag=LNP58_RS20285;product=kynureninase;protein_id=WP_011408606.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4311366 4313543 . - . ID=gene-LNP58_RS20290;Name=LNP58_RS20290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20290;old_locus_tag=LNP58_20250;pseudo=true NZ_CP086372.1 Protein Homology CDS 4311366 4313543 . - 0 ID=cds-LNP58_RS20290;Parent=gene-LNP58_RS20290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300684.1;locus_tag=LNP58_RS20290;product=FUSC family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4313556 4314086 . - . ID=gene-LNP58_RS20295;Name=LNP58_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20295;old_locus_tag=LNP58_20255 NZ_CP086372.1 Protein Homology CDS 4313556 4314086 . - 0 ID=cds-WP_024744799.1;Parent=gene-LNP58_RS20295;Dbxref=Genbank:WP_024744799.1;Name=WP_024744799.1;Ontology_term=GO:0000334,GO:0005506;gbkey=CDS;go_function=3-hydroxyanthranilate 3%2C4-dioxygenase activity|0000334||IEA,iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155876.1;locus_tag=LNP58_RS20295;product=3-hydroxyanthranilate 3%2C4-dioxygenase;protein_id=WP_024744799.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4314175 4314837 . - . ID=gene-LNP58_RS20300;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LNP58_RS20300;old_locus_tag=LNP58_20260 NZ_CP086372.1 Protein Homology CDS 4314175 4314837 . - 0 ID=cds-WP_011408603.1;Parent=gene-LNP58_RS20300;Dbxref=Genbank:WP_011408603.1;Name=WP_011408603.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902447.1;locus_tag=LNP58_RS20300;product=carbonate dehydratase;protein_id=WP_011408603.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4314924 4315562 . - . ID=gene-LNP58_RS20305;Name=LNP58_RS20305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20305;old_locus_tag=LNP58_20265;pseudo=true NZ_CP086372.1 Protein Homology CDS 4314924 4315562 . - 0 ID=cds-LNP58_RS20305;Parent=gene-LNP58_RS20305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379580.1;locus_tag=LNP58_RS20305;product=FMN-binding negative transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4315564 4315890 . - . ID=gene-LNP58_RS20310;Name=LNP58_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20310;old_locus_tag=LNP58_20270 NZ_CP086372.1 Protein Homology CDS 4315564 4315890 . - 0 ID=cds-WP_011408600.1;Parent=gene-LNP58_RS20310;Dbxref=Genbank:WP_011408600.1;Name=WP_011408600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158152.1;locus_tag=LNP58_RS20310;product=hypothetical protein;protein_id=WP_011408600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4315887 4316192 . - . ID=gene-LNP58_RS20315;Name=LNP58_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20315;old_locus_tag=LNP58_20275 NZ_CP086372.1 Protein Homology CDS 4315887 4316192 . - 0 ID=cds-WP_011408599.1;Parent=gene-LNP58_RS20315;Dbxref=Genbank:WP_011408599.1;Name=WP_011408599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158153.1;locus_tag=LNP58_RS20315;product=hypothetical protein;protein_id=WP_011408599.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4316189 4316446 . - . ID=gene-LNP58_RS20320;Name=LNP58_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20320;old_locus_tag=LNP58_20280 NZ_CP086372.1 Protein Homology CDS 4316189 4316446 . - 0 ID=cds-WP_011259080.1;Parent=gene-LNP58_RS20320;Dbxref=Genbank:WP_011259080.1;Name=WP_011259080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300679.1;locus_tag=LNP58_RS20320;product=hypothetical protein;protein_id=WP_011259080.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4316448 4317842 . - . ID=gene-LNP58_RS20325;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LNP58_RS20325;old_locus_tag=LNP58_20285 NZ_CP086372.1 Protein Homology CDS 4316448 4317842 . - 0 ID=cds-WP_011408598.1;Parent=gene-LNP58_RS20325;Dbxref=Genbank:WP_011408598.1;Name=WP_011408598.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237793.1;locus_tag=LNP58_RS20325;product=asparagine--tRNA ligase;protein_id=WP_011408598.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4318049 4318387 . + . ID=gene-LNP58_RS20330;Name=LNP58_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20330;old_locus_tag=LNP58_20290 NZ_CP086372.1 Protein Homology CDS 4318049 4318387 . + 0 ID=cds-WP_011408597.1;Parent=gene-LNP58_RS20330;Dbxref=Genbank:WP_011408597.1;Name=WP_011408597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966300.1;locus_tag=LNP58_RS20330;product=iron-sulfur cluster assembly accessory protein;protein_id=WP_011408597.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4318743 4319174 . + . ID=gene-LNP58_RS20335;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LNP58_RS20335;old_locus_tag=LNP58_20295 NZ_CP086372.1 Protein Homology CDS 4318743 4319174 . + 0 ID=cds-WP_011259077.1;Parent=gene-LNP58_RS20335;Dbxref=Genbank:WP_011259077.1;Name=WP_011259077.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991245.1;locus_tag=LNP58_RS20335;product=30S ribosomal protein S6;protein_id=WP_011259077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4319186 4319416 . + . ID=gene-LNP58_RS20340;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LNP58_RS20340;old_locus_tag=LNP58_20300 NZ_CP086372.1 Protein Homology CDS 4319186 4319416 . + 0 ID=cds-WP_005991243.1;Parent=gene-LNP58_RS20340;Dbxref=Genbank:WP_005991243.1;Name=WP_005991243.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=LNP58_RS20340;product=30S ribosomal protein S18;protein_id=WP_005991243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4319669 4320118 . + . ID=gene-LNP58_RS20345;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LNP58_RS20345;old_locus_tag=LNP58_20305 NZ_CP086372.1 Protein Homology CDS 4319669 4320118 . + 0 ID=cds-WP_011259076.1;Parent=gene-LNP58_RS20345;Dbxref=Genbank:WP_011259076.1;Name=WP_011259076.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379584.1;locus_tag=LNP58_RS20345;product=50S ribosomal protein L9;protein_id=WP_011259076.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4320328 4323831 . + . ID=gene-LNP58_RS20350;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LNP58_RS20350;old_locus_tag=LNP58_20310 NZ_CP086372.1 Protein Homology CDS 4320328 4323831 . + 0 ID=cds-WP_011408596.1;Parent=gene-LNP58_RS20350;Dbxref=Genbank:WP_011408596.1;Name=WP_011408596.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451583.1;locus_tag=LNP58_RS20350;product=chromosome segregation protein SMC;protein_id=WP_011408596.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4323888 4324619 . + . ID=gene-LNP58_RS20355;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LNP58_RS20355;old_locus_tag=LNP58_20315 NZ_CP086372.1 Protein Homology CDS 4323888 4324619 . + 0 ID=cds-WP_011259074.1;Parent=gene-LNP58_RS20355;Dbxref=Genbank:WP_011259074.1;Name=WP_011259074.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903841.1;locus_tag=LNP58_RS20355;product=cell division protein ZipA;protein_id=WP_011259074.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4324626 4325007 . + . ID=gene-LNP58_RS20360;Name=LNP58_RS20360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20360;old_locus_tag=LNP58_20320;pseudo=true NZ_CP086372.1 Protein Homology CDS 4324626 4325007 . + 0 ID=cds-LNP58_RS20360;Parent=gene-LNP58_RS20360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158159.1;locus_tag=LNP58_RS20360;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4325178 4325405 . - . ID=gene-LNP58_RS20365;Name=LNP58_RS20365;end_range=4325405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20365;old_locus_tag=LNP58_20325;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4325178 4325405 . - 0 ID=cds-LNP58_RS20365;Parent=gene-LNP58_RS20365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4325405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159896.1;locus_tag=LNP58_RS20365;partial=true;product=aminotransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4325475 4328000 . + . ID=gene-LNP58_RS20370;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LNP58_RS20370;old_locus_tag=LNP58_20330 NZ_CP086372.1 Protein Homology CDS 4325475 4328000 . + 0 ID=cds-WP_011408594.1;Parent=gene-LNP58_RS20370;Dbxref=Genbank:WP_011408594.1;Name=WP_011408594.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502845.1;locus_tag=LNP58_RS20370;product=NAD-dependent DNA ligase LigA;protein_id=WP_011408594.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4327997 4328959 . + . ID=gene-LNP58_RS20375;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LNP58_RS20375;old_locus_tag=LNP58_20335 NZ_CP086372.1 Protein Homology CDS 4327997 4328959 . + 0 ID=cds-WP_011259071.1;Parent=gene-LNP58_RS20375;Dbxref=Genbank:WP_011259071.1;Name=WP_011259071.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158162.1;locus_tag=LNP58_RS20375;product=EF-P lysine aminoacylase EpmA;protein_id=WP_011259071.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4329069 4329755 . + . ID=gene-LNP58_RS20380;Name=LNP58_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20380;old_locus_tag=LNP58_20340 NZ_CP086372.1 Protein Homology CDS 4329069 4329755 . + 0 ID=cds-WP_041182140.1;Parent=gene-LNP58_RS20380;Dbxref=Genbank:WP_041182140.1;Name=WP_041182140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089862.1;locus_tag=LNP58_RS20380;product=DUF3011 domain-containing protein;protein_id=WP_041182140.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4329818 4329893 . + . ID=gene-LNP58_RS20385;Name=LNP58_RS20385;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS20385;old_locus_tag=LNP58_20345 NZ_CP086372.1 cmsearch ncRNA 4329818 4329893 . + . ID=rna-LNP58_RS20385;Parent=gene-LNP58_RS20385;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20385;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4329818 4329893 . + . ID=exon-LNP58_RS20385-1;Parent=rna-LNP58_RS20385;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20385;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4329956 4331020 . + . ID=gene-LNP58_RS20390;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LNP58_RS20390;old_locus_tag=LNP58_20350 NZ_CP086372.1 Protein Homology CDS 4329956 4331020 . + 0 ID=cds-WP_011259069.1;Parent=gene-LNP58_RS20390;Dbxref=Genbank:WP_011259069.1;Name=WP_011259069.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051043.1;locus_tag=LNP58_RS20390;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_011259069.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4331231 4333927 . + . ID=gene-LNP58_RS20395;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LNP58_RS20395;old_locus_tag=LNP58_20355 NZ_CP086372.1 Protein Homology CDS 4331231 4333927 . + 0 ID=cds-WP_011259068.1;Parent=gene-LNP58_RS20395;Dbxref=Genbank:WP_011259068.1;Name=WP_011259068.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158164.1;locus_tag=LNP58_RS20395;product=DNA gyrase subunit A;protein_id=WP_011259068.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4334060 4334841 . + . ID=gene-LNP58_RS20400;Name=LNP58_RS20400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20400;old_locus_tag=LNP58_20360;pseudo=true NZ_CP086372.1 Protein Homology CDS 4334060 4334841 . + 0 ID=cds-LNP58_RS20400;Parent=gene-LNP58_RS20400;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558219.1;locus_tag=LNP58_RS20400;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4334963 4335715 . - . ID=gene-LNP58_RS20405;Name=LNP58_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20405;old_locus_tag=LNP58_20365 NZ_CP086372.1 Protein Homology CDS 4334963 4335715 . - 0 ID=cds-WP_012444817.1;Parent=gene-LNP58_RS20405;Dbxref=Genbank:WP_012444817.1;Name=WP_012444817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503761.1;locus_tag=LNP58_RS20405;product=hypothetical protein;protein_id=WP_012444817.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4335845 4336939 . - . ID=gene-LNP58_RS20410;Name=LNP58_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20410;old_locus_tag=LNP58_20370 NZ_CP086372.1 Protein Homology CDS 4335845 4336939 . - 0 ID=cds-WP_011408590.1;Parent=gene-LNP58_RS20410;Dbxref=Genbank:WP_011408590.1;Name=WP_011408590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408590.1;locus_tag=LNP58_RS20410;product=acyltransferase;protein_id=WP_011408590.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4337332 4338999 . - . ID=gene-LNP58_RS20415;Name=LNP58_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20415;old_locus_tag=LNP58_20375 NZ_CP086372.1 Protein Homology CDS 4337332 4338999 . - 0 ID=cds-WP_011259063.1;Parent=gene-LNP58_RS20415;Dbxref=Genbank:WP_011259063.1;Name=WP_011259063.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165198.1;locus_tag=LNP58_RS20415;product=urocanate hydratase;protein_id=WP_011259063.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4339016 4339873 . - . ID=gene-LNP58_RS20420;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LNP58_RS20420;old_locus_tag=LNP58_20380 NZ_CP086372.1 Protein Homology CDS 4339016 4339873 . - 0 ID=cds-WP_011259062.1;Parent=gene-LNP58_RS20420;Dbxref=Genbank:WP_011259062.1;Name=WP_011259062.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485831.1;locus_tag=LNP58_RS20420;product=N-formylglutamate deformylase;protein_id=WP_011259062.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4340052 4341593 . - . ID=gene-LNP58_RS20425;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LNP58_RS20425;old_locus_tag=LNP58_20385 NZ_CP086372.1 Protein Homology CDS 4340052 4341593 . - 0 ID=cds-WP_069959863.1;Parent=gene-LNP58_RS20425;Dbxref=Genbank:WP_069959863.1;Name=WP_069959863.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158168.1;locus_tag=LNP58_RS20425;product=histidine ammonia-lyase;protein_id=WP_069959863.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4341607 4342812 . - . ID=gene-LNP58_RS20430;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LNP58_RS20430;old_locus_tag=LNP58_20390 NZ_CP086372.1 Protein Homology CDS 4341607 4342812 . - 0 ID=cds-WP_011259060.1;Parent=gene-LNP58_RS20430;Dbxref=Genbank:WP_011259060.1;Name=WP_011259060.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158169.1;locus_tag=LNP58_RS20430;product=imidazolonepropionase;protein_id=WP_011259060.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4342873 4344243 . + . ID=gene-LNP58_RS20435;Name=LNP58_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20435;old_locus_tag=LNP58_20395 NZ_CP086372.1 Protein Homology CDS 4342873 4344243 . + 0 ID=cds-WP_012444821.1;Parent=gene-LNP58_RS20435;Dbxref=Genbank:WP_012444821.1;Name=WP_012444821.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159894.1;locus_tag=LNP58_RS20435;product=formimidoylglutamate deiminase;protein_id=WP_012444821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4344568 4345305 . + . ID=gene-LNP58_RS20440;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LNP58_RS20440;old_locus_tag=LNP58_20400 NZ_CP086372.1 Protein Homology CDS 4344568 4345305 . + 0 ID=cds-WP_075242359.1;Parent=gene-LNP58_RS20440;Dbxref=Genbank:WP_075242359.1;Name=WP_075242359.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158172.1;locus_tag=LNP58_RS20440;product=histidine utilization repressor;protein_id=WP_075242359.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4345462 4346463 . - . ID=gene-LNP58_RS20445;Name=LNP58_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20445;old_locus_tag=LNP58_20405 NZ_CP086372.1 Protein Homology CDS 4345462 4346463 . - 0 ID=cds-WP_027703736.1;Parent=gene-LNP58_RS20445;Dbxref=Genbank:WP_027703736.1;Name=WP_027703736.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347042.1;locus_tag=LNP58_RS20445;product=restriction endonuclease;protein_id=WP_027703736.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4347030 4347593 . - . ID=gene-LNP58_RS20450;Name=LNP58_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20450;old_locus_tag=LNP58_20410 NZ_CP086372.1 Protein Homology CDS 4347030 4347593 . - 0 ID=cds-WP_011259056.1;Parent=gene-LNP58_RS20450;Dbxref=Genbank:WP_011259056.1;Name=WP_011259056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158174.1;locus_tag=LNP58_RS20450;product=phasin family protein;protein_id=WP_011259056.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4347755 4348030 . - . ID=gene-LNP58_RS20455;Name=LNP58_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20455;old_locus_tag=LNP58_20415 NZ_CP086372.1 Protein Homology CDS 4347755 4348030 . - 0 ID=cds-WP_011259055.1;Parent=gene-LNP58_RS20455;Dbxref=Genbank:WP_011259055.1;Name=WP_011259055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503751.1;locus_tag=LNP58_RS20455;product=polyhydroxyalkanoic acid system family protein;protein_id=WP_011259055.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4348271 4349080 . + . ID=gene-LNP58_RS20460;Name=LNP58_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20460;old_locus_tag=LNP58_20420 NZ_CP086372.1 Protein Homology CDS 4348271 4349080 . + 0 ID=cds-WP_012444823.1;Parent=gene-LNP58_RS20460;Dbxref=Genbank:WP_012444823.1;Name=WP_012444823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904651.1;locus_tag=LNP58_RS20460;product=FHA domain-containing protein;protein_id=WP_012444823.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4349022 4349678 . - . ID=gene-LNP58_RS20465;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LNP58_RS20465;old_locus_tag=LNP58_20425 NZ_CP086372.1 Protein Homology CDS 4349022 4349678 . - 0 ID=cds-WP_011408583.1;Parent=gene-LNP58_RS20465;Dbxref=Genbank:WP_011408583.1;Name=WP_011408583.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036769.1;locus_tag=LNP58_RS20465;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_011408583.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4349978 4350946 . - . ID=gene-LNP58_RS20470;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LNP58_RS20470;old_locus_tag=LNP58_20430 NZ_CP086372.1 Protein Homology CDS 4349978 4350946 . - 0 ID=cds-WP_011408582.1;Parent=gene-LNP58_RS20470;Dbxref=Genbank:WP_011408582.1;Name=WP_011408582.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914864.1;locus_tag=LNP58_RS20470;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_011408582.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4351121 4352206 . + . ID=gene-LNP58_RS20475;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LNP58_RS20475;old_locus_tag=LNP58_20435 NZ_CP086372.1 Protein Homology CDS 4351121 4352206 . + 0 ID=cds-WP_011259052.1;Parent=gene-LNP58_RS20475;Dbxref=Genbank:WP_011259052.1;Name=WP_011259052.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300927.1;locus_tag=LNP58_RS20475;product=phosphoserine transaminase;protein_id=WP_011259052.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4352255 4353463 . + . ID=gene-LNP58_RS20480;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LNP58_RS20480;old_locus_tag=LNP58_20440 NZ_CP086372.1 Protein Homology CDS 4352255 4353463 . + 0 ID=cds-WP_011259051.1;Parent=gene-LNP58_RS20480;Dbxref=Genbank:WP_011259051.1;Name=WP_011259051.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300926.1;locus_tag=LNP58_RS20480;product=prephenate dehydratase;protein_id=WP_011259051.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4353585 4354907 . + . ID=gene-LNP58_RS20485;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LNP58_RS20485;old_locus_tag=LNP58_20445 NZ_CP086372.1 Protein Homology CDS 4353585 4354907 . + 0 ID=cds-WP_075242985.1;Parent=gene-LNP58_RS20485;Dbxref=Genbank:WP_075242985.1;Name=WP_075242985.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259050.1;locus_tag=LNP58_RS20485;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_075242985.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4354931 4355545 . - . ID=gene-LNP58_RS20490;Name=LNP58_RS20490;end_range=4355545,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20490;old_locus_tag=LNP58_20450;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4354931 4355545 . - 0 ID=cds-LNP58_RS20490;Parent=gene-LNP58_RS20490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4355545,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS20490;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4355549 4355823 . - . ID=gene-LNP58_RS20495;Name=LNP58_RS20495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20495;old_locus_tag=LNP58_20455;partial=true;pseudo=true;start_range=.,4355549 NZ_CP086372.1 Protein Homology CDS 4355549 4355823 . - 0 ID=cds-LNP58_RS20495;Parent=gene-LNP58_RS20495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611270.1%2CRefSeq:WP_076612143.1;locus_tag=LNP58_RS20495;partial=true;product=transposase;pseudo=true;start_range=.,4355549;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4355953 4356060 . - . ID=gene-LNP58_RS20500;Name=LNP58_RS20500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20500;old_locus_tag=LNP58_20460;partial=true;pseudo=true;start_range=.,4355953 NZ_CP086372.1 Protein Homology CDS 4355953 4356060 . - 0 ID=cds-LNP58_RS20500;Parent=gene-LNP58_RS20500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=LNP58_RS20500;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,4355953;transl_table=11 NZ_CP086372.1 RefSeq gene 4356172 4357185 . - . ID=gene-LNP58_RS20505;Name=LNP58_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20505;old_locus_tag=LNP58_20465 NZ_CP086372.1 Protein Homology CDS 4356172 4357185 . - 0 ID=cds-WP_011259047.1;Parent=gene-LNP58_RS20505;Dbxref=Genbank:WP_011259047.1;Name=WP_011259047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038670.1;locus_tag=LNP58_RS20505;product=hypothetical protein;protein_id=WP_011259047.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4357788 4365926 . + . ID=gene-LNP58_RS20510;Name=LNP58_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20510;old_locus_tag=LNP58_20470 NZ_CP086372.1 Protein Homology CDS 4357788 4365926 . + 0 ID=cds-WP_113085560.1;Parent=gene-LNP58_RS20510;Dbxref=Genbank:WP_113085560.1;Name=WP_113085560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444829.1;locus_tag=LNP58_RS20510;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_113085560.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4366203 4366814 . - . ID=gene-LNP58_RS20515;Name=LNP58_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20515;old_locus_tag=LNP58_20475 NZ_CP086372.1 Protein Homology CDS 4366203 4366814 . - 0 ID=cds-WP_011259043.1;Parent=gene-LNP58_RS20515;Dbxref=Genbank:WP_011259043.1;Name=WP_011259043.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916054.1;locus_tag=LNP58_RS20515;product=response regulator;protein_id=WP_011259043.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4366811 4367833 . - . ID=gene-LNP58_RS20520;Name=LNP58_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20520;old_locus_tag=LNP58_20480 NZ_CP086372.1 Protein Homology CDS 4366811 4367833 . - 0 ID=cds-WP_027703759.1;Parent=gene-LNP58_RS20520;Dbxref=Genbank:WP_027703759.1;Name=WP_027703759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159768.1;locus_tag=LNP58_RS20520;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_027703759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4367952 4369436 . - . ID=gene-LNP58_RS20525;Name=LNP58_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20525;old_locus_tag=LNP58_20485 NZ_CP086372.1 Protein Homology CDS 4367952 4369436 . - 0 ID=cds-WP_011408577.1;Parent=gene-LNP58_RS20525;Dbxref=Genbank:WP_011408577.1;Name=WP_011408577.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159769.1;locus_tag=LNP58_RS20525;product=efflux transporter outer membrane subunit;protein_id=WP_011408577.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4369433 4372525 . - . ID=gene-LNP58_RS20530;Name=LNP58_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20530;old_locus_tag=LNP58_20490 NZ_CP086372.1 Protein Homology CDS 4369433 4372525 . - 0 ID=cds-WP_011408576.1;Parent=gene-LNP58_RS20530;Dbxref=Genbank:WP_011408576.1;Name=WP_011408576.1;Ontology_term=GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571964.1;locus_tag=LNP58_RS20530;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=WP_011408576.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4372518 4373633 . - . ID=gene-LNP58_RS20535;Name=LNP58_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20535;old_locus_tag=LNP58_20495 NZ_CP086372.1 Protein Homology CDS 4372518 4373633 . - 0 ID=cds-WP_011408575.1;Parent=gene-LNP58_RS20535;Dbxref=Genbank:WP_011408575.1;Name=WP_011408575.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373460.1;locus_tag=LNP58_RS20535;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011408575.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4374132 4376867 . - . ID=gene-LNP58_RS20540;Name=LNP58_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20540;old_locus_tag=LNP58_20500 NZ_CP086372.1 Protein Homology CDS 4374132 4376867 . - 0 ID=cds-WP_011408573.1;Parent=gene-LNP58_RS20540;Dbxref=Genbank:WP_011408573.1;Name=WP_011408573.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160179.1;locus_tag=LNP58_RS20540;product=S8 family serine peptidase;protein_id=WP_011408573.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4377699 4379075 . + . ID=gene-LNP58_RS20545;Name=LNP58_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20545;old_locus_tag=LNP58_20505 NZ_CP086372.1 Protein Homology CDS 4377699 4379075 . + 0 ID=cds-WP_069964867.1;Parent=gene-LNP58_RS20545;Dbxref=Genbank:WP_069964867.1;Name=WP_069964867.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS20545;product=IS5 family transposase;protein_id=WP_069964867.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4379100 4379593 . - . ID=gene-LNP58_RS20550;Name=LNP58_RS20550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20550;old_locus_tag=LNP58_20510;partial=true;pseudo=true;start_range=.,4379100 NZ_CP086372.1 Protein Homology CDS 4379100 4379593 . - 0 ID=cds-LNP58_RS20550;Parent=gene-LNP58_RS20550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=LNP58_RS20550;partial=true;product=transposase;pseudo=true;start_range=.,4379100;transl_table=11 NZ_CP086372.1 RefSeq gene 4379820 4381295 . + . ID=gene-LNP58_RS20555;Name=LNP58_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20555;old_locus_tag=LNP58_20515 NZ_CP086372.1 Protein Homology CDS 4379820 4381295 . + 0 ID=cds-WP_069959772.1-2;Parent=gene-LNP58_RS20555;Dbxref=Genbank:WP_069959772.1;Name=WP_069959772.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS20555;product=IS5-like element ISXoo5 family transposase;protein_id=WP_069959772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4381620 4382798 . + . ID=gene-LNP58_RS20560;Name=LNP58_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20560;old_locus_tag=LNP58_20520 NZ_CP086372.1 Protein Homology CDS 4381620 4382798 . + 0 ID=cds-WP_011408569.1;Parent=gene-LNP58_RS20560;Dbxref=Genbank:WP_011408569.1;Name=WP_011408569.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051137.1;locus_tag=LNP58_RS20560;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011408569.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4382836 4383756 . + . ID=gene-LNP58_RS20565;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LNP58_RS20565;old_locus_tag=LNP58_20525 NZ_CP086372.1 Protein Homology CDS 4382836 4383756 . + 0 ID=cds-WP_011408568.1;Parent=gene-LNP58_RS20565;Dbxref=Genbank:WP_011408568.1;Name=WP_011408568.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408568.1;locus_tag=LNP58_RS20565;product=GTP cyclohydrolase FolE2;protein_id=WP_011408568.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4384250 4384324 . - . ID=gene-LNP58_RS20570;Name=LNP58_RS20570;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20570;old_locus_tag=LNP58_20530 NZ_CP086372.1 tRNAscan-SE tRNA 4384250 4384324 . - . ID=rna-LNP58_RS20570;Parent=gene-LNP58_RS20570;anticodon=(pos:complement(4384289..4384291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20570;product=tRNA-Glu NZ_CP086372.1 tRNAscan-SE exon 4384250 4384324 . - . ID=exon-LNP58_RS20570-1;Parent=rna-LNP58_RS20570;anticodon=(pos:complement(4384289..4384291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20570;product=tRNA-Glu NZ_CP086372.1 RefSeq gene 4384372 4385739 . + . ID=gene-LNP58_RS20575;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LNP58_RS20575;old_locus_tag=LNP58_20535 NZ_CP086372.1 Protein Homology CDS 4384372 4385739 . + 0 ID=cds-WP_011259034.1;Parent=gene-LNP58_RS20575;Dbxref=Genbank:WP_011259034.1;Name=WP_011259034.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116093.1;locus_tag=LNP58_RS20575;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_011259034.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4385743 4386228 . + . ID=gene-LNP58_RS20580;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LNP58_RS20580;old_locus_tag=LNP58_20540 NZ_CP086372.1 Protein Homology CDS 4385743 4386228 . + 0 ID=cds-WP_011259033.1;Parent=gene-LNP58_RS20580;Dbxref=Genbank:WP_011259033.1;Name=WP_011259033.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169088.1;locus_tag=LNP58_RS20580;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_011259033.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4386264 4387079 . + . ID=gene-LNP58_RS20585;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LNP58_RS20585;old_locus_tag=LNP58_20545 NZ_CP086372.1 Protein Homology CDS 4386264 4387079 . + 0 ID=cds-WP_075242310.1;Parent=gene-LNP58_RS20585;Dbxref=Genbank:WP_075242310.1;Name=WP_075242310.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408567.1;locus_tag=LNP58_RS20585;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_075242310.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4387076 4387918 . + . ID=gene-LNP58_RS20590;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LNP58_RS20590;old_locus_tag=LNP58_20550 NZ_CP086372.1 Protein Homology CDS 4387076 4387918 . + 0 ID=cds-WP_011259031.1;Parent=gene-LNP58_RS20590;Dbxref=Genbank:WP_011259031.1;Name=WP_011259031.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259031.1;locus_tag=LNP58_RS20590;product=pantoate--beta-alanine ligase;protein_id=WP_011259031.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4388097 4388477 . + . ID=gene-LNP58_RS20595;Name=LNP58_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20595;old_locus_tag=LNP58_20555 NZ_CP086372.1 Protein Homology CDS 4388097 4388477 . + 0 ID=cds-WP_011259030.1;Parent=gene-LNP58_RS20595;Dbxref=Genbank:WP_011259030.1;Name=WP_011259030.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036943.1;locus_tag=LNP58_RS20595;product=aspartate 1-decarboxylase;protein_id=WP_011259030.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4388474 4389988 . + . ID=gene-LNP58_RS20600;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LNP58_RS20600;old_locus_tag=LNP58_20560 NZ_CP086372.1 Protein Homology CDS 4388474 4389988 . + 0 ID=cds-WP_069964869.1;Parent=gene-LNP58_RS20600;Dbxref=Genbank:WP_069964869.1;Name=WP_069964869.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300464.1;locus_tag=LNP58_RS20600;product=glucose-6-phosphate isomerase;protein_id=WP_069964869.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4390147 4390491 . + . ID=gene-LNP58_RS20605;Name=LNP58_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20605;old_locus_tag=LNP58_20565 NZ_CP086372.1 Protein Homology CDS 4390147 4390491 . + 0 ID=cds-WP_011259028.1;Parent=gene-LNP58_RS20605;Dbxref=Genbank:WP_011259028.1;Name=WP_011259028.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371400.1;locus_tag=LNP58_RS20605;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_011259028.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4390495 4391118 . + . ID=gene-LNP58_RS20610;Name=LNP58_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20610;old_locus_tag=LNP58_20570 NZ_CP086372.1 Protein Homology CDS 4390495 4391118 . + 0 ID=cds-WP_011408564.1;Parent=gene-LNP58_RS20610;Dbxref=Genbank:WP_011408564.1;Name=WP_011408564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408564.1;locus_tag=LNP58_RS20610;product=hypothetical protein;protein_id=WP_011408564.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4391353 4393308 . - . ID=gene-LNP58_RS20615;Name=LNP58_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20615;old_locus_tag=LNP58_20575 NZ_CP086372.1 Protein Homology CDS 4391353 4393308 . - 0 ID=cds-WP_011408563.1;Parent=gene-LNP58_RS20615;Dbxref=Genbank:WP_011408563.1;Name=WP_011408563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463094.1;locus_tag=LNP58_RS20615;product=DUF839 domain-containing protein;protein_id=WP_011408563.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4393742 4396354 . + . ID=gene-LNP58_RS20620;Name=LNP58_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20620;old_locus_tag=LNP58_20580 NZ_CP086372.1 Protein Homology CDS 4393742 4396354 . + 0 ID=cds-WP_075243433.1;Parent=gene-LNP58_RS20620;Dbxref=Genbank:WP_075243433.1;Name=WP_075243433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300459.1;locus_tag=LNP58_RS20620;product=exo 1%2C3/1%2C4-beta-D-glucan glucohydrolase;protein_id=WP_075243433.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4396614 4398176 . + . ID=gene-LNP58_RS20625;Name=LNP58_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20625;old_locus_tag=LNP58_20585 NZ_CP086372.1 Protein Homology CDS 4396614 4398176 . + 0 ID=cds-WP_011408561.1;Parent=gene-LNP58_RS20625;Dbxref=Genbank:WP_011408561.1;Name=WP_011408561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116097.1;locus_tag=LNP58_RS20625;product=sodium/sugar symporter;protein_id=WP_011408561.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4398285 4398359 . - . ID=gene-LNP58_RS20630;Name=LNP58_RS20630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS20630;old_locus_tag=LNP58_20590 NZ_CP086372.1 cmsearch ncRNA 4398285 4398359 . - . ID=rna-LNP58_RS20630;Parent=gene-LNP58_RS20630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20630;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4398285 4398359 . - . ID=exon-LNP58_RS20630-1;Parent=rna-LNP58_RS20630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20630;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4398421 4400277 . - . ID=gene-LNP58_RS20635;Name=LNP58_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20635;old_locus_tag=LNP58_20595 NZ_CP086372.1 Protein Homology CDS 4398421 4400277 . - 0 ID=cds-WP_027703349.1;Parent=gene-LNP58_RS20635;Dbxref=Genbank:WP_027703349.1;Name=WP_027703349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158049.1;locus_tag=LNP58_RS20635;product=EAL domain-containing protein;protein_id=WP_027703349.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4400582 4401034 . + . ID=gene-LNP58_RS20640;Name=LNP58_RS20640;end_range=4401034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20640;old_locus_tag=LNP58_20600;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4400582 4401034 . + 0 ID=cds-LNP58_RS20640;Parent=gene-LNP58_RS20640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4401034,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=LNP58_RS20640;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4401377 4401463 . - . ID=gene-LNP58_RS20645;Name=LNP58_RS20645;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20645;old_locus_tag=LNP58_20605 NZ_CP086372.1 tRNAscan-SE tRNA 4401377 4401463 . - . ID=rna-LNP58_RS20645;Parent=gene-LNP58_RS20645;anticodon=(pos:complement(4401427..4401429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20645;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 4401377 4401463 . - . ID=exon-LNP58_RS20645-1;Parent=rna-LNP58_RS20645;anticodon=(pos:complement(4401427..4401429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20645;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 4401604 4403793 . - . ID=gene-LNP58_RS20650;Name=LNP58_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20650;old_locus_tag=LNP58_20610 NZ_CP086372.1 Protein Homology CDS 4401604 4403793 . - 0 ID=cds-WP_075243770.1;Parent=gene-LNP58_RS20650;Dbxref=Genbank:WP_075243770.1;Name=WP_075243770.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155718.1;locus_tag=LNP58_RS20650;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_075243770.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4403922 4405700 . - . ID=gene-LNP58_RS20655;Name=LNP58_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20655;old_locus_tag=LNP58_20615 NZ_CP086372.1 Protein Homology CDS 4403922 4405700 . - 0 ID=cds-WP_044756846.1;Parent=gene-LNP58_RS20655;Dbxref=Genbank:WP_044756846.1;Name=WP_044756846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408559.1;locus_tag=LNP58_RS20655;product=M14 family metallopeptidase;protein_id=WP_044756846.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4405932 4406894 . + . ID=gene-LNP58_RS20660;Name=LNP58_RS20660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20660;old_locus_tag=LNP58_20620;pseudo=true NZ_CP086372.1 Protein Homology CDS 4405932 4406894 . + 0 ID=cds-LNP58_RS20660;Parent=gene-LNP58_RS20660;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160292.1;locus_tag=LNP58_RS20660;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4406902 4407510 . + . ID=gene-LNP58_RS20665;Name=LNP58_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20665;old_locus_tag=LNP58_20625 NZ_CP086372.1 Protein Homology CDS 4406902 4407510 . + 0 ID=cds-WP_011408557.1;Parent=gene-LNP58_RS20665;Dbxref=Genbank:WP_011408557.1;Name=WP_011408557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300253.1;locus_tag=LNP58_RS20665;product=rhomboid family intramembrane serine protease;protein_id=WP_011408557.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4407841 4408029 . - . ID=gene-LNP58_RS20670;Name=LNP58_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20670;old_locus_tag=LNP58_20630 NZ_CP086372.1 Protein Homology CDS 4407841 4408029 . - 0 ID=cds-WP_044756845.1;Parent=gene-LNP58_RS20670;Dbxref=Genbank:WP_044756845.1;Name=WP_044756845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483521.1;locus_tag=LNP58_RS20670;product=hypothetical protein;protein_id=WP_044756845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4408213 4408527 . + . ID=gene-LNP58_RS20675;Name=LNP58_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20675;old_locus_tag=LNP58_20635 NZ_CP086372.1 Protein Homology CDS 4408213 4408527 . + 0 ID=cds-WP_011408556.1;Parent=gene-LNP58_RS20675;Dbxref=Genbank:WP_011408556.1;Name=WP_011408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366253.1;locus_tag=LNP58_RS20675;product=GNAT family N-acetyltransferase;protein_id=WP_011408556.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4408578 4409411 . + . ID=gene-LNP58_RS20680;Name=LNP58_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20680;old_locus_tag=LNP58_20640 NZ_CP086372.1 Protein Homology CDS 4408578 4409411 . + 0 ID=cds-WP_044756844.1;Parent=gene-LNP58_RS20680;Dbxref=Genbank:WP_044756844.1;Name=WP_044756844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089774.1;locus_tag=LNP58_RS20680;product=DUF4163 domain-containing protein;protein_id=WP_044756844.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4409478 4409978 . + . ID=gene-LNP58_RS20685;Name=LNP58_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20685;old_locus_tag=LNP58_20645 NZ_CP086372.1 Protein Homology CDS 4409478 4409978 . + 0 ID=cds-WP_044756843.1;Parent=gene-LNP58_RS20685;Dbxref=Genbank:WP_044756843.1;Name=WP_044756843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366256.1;locus_tag=LNP58_RS20685;product=MarR family transcriptional regulator;protein_id=WP_044756843.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4410070 4410813 . - . ID=gene-LNP58_RS20690;Name=LNP58_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20690;old_locus_tag=LNP58_20650 NZ_CP086372.1 Protein Homology CDS 4410070 4410813 . - 0 ID=cds-WP_228329615.1;Parent=gene-LNP58_RS20690;Dbxref=Genbank:WP_228329615.1;Name=WP_228329615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444863.1;locus_tag=LNP58_RS20690;product=hypothetical protein;protein_id=WP_228329615.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4410810 4411310 . - . ID=gene-LNP58_RS20695;Name=LNP58_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20695;old_locus_tag=LNP58_20655 NZ_CP086372.1 Protein Homology CDS 4410810 4411310 . - 0 ID=cds-WP_011259013.1;Parent=gene-LNP58_RS20695;Dbxref=Genbank:WP_011259013.1;Name=WP_011259013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259013.1;locus_tag=LNP58_RS20695;product=RNA polymerase sigma factor;protein_id=WP_011259013.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4411469 4412722 . + . ID=gene-LNP58_RS20700;Name=LNP58_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20700;old_locus_tag=LNP58_20660 NZ_CP086372.1 Protein Homology CDS 4411469 4412722 . + 0 ID=cds-WP_229001912.1;Parent=gene-LNP58_RS20700;Dbxref=Genbank:WP_229001912.1;Name=WP_229001912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503877.1;locus_tag=LNP58_RS20700;product=S8 family serine peptidase;protein_id=WP_229001912.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4412825 4413538 . + . ID=gene-LNP58_RS20705;Name=LNP58_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20705;old_locus_tag=LNP58_20665 NZ_CP086372.1 Protein Homology CDS 4412825 4413538 . + 0 ID=cds-WP_069959861.1;Parent=gene-LNP58_RS20705;Dbxref=Genbank:WP_069959861.1;Name=WP_069959861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117317.1;locus_tag=LNP58_RS20705;product=hypothetical protein;protein_id=WP_069959861.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4413880 4414008 . + . ID=gene-LNP58_RS20710;Name=LNP58_RS20710;end_range=4414008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20710;old_locus_tag=LNP58_20670;partial=true;pseudo=true;start_range=.,4413880 NZ_CP086372.1 Protein Homology CDS 4413880 4414008 . + 0 ID=cds-LNP58_RS20710;Parent=gene-LNP58_RS20710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4414008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257360.1;locus_tag=LNP58_RS20710;partial=true;product=HTH domain-containing protein;pseudo=true;start_range=.,4413880;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4414070 4416244 . - . ID=gene-LNP58_RS20715;Name=LNP58_RS20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20715;old_locus_tag=LNP58_20675;pseudo=true NZ_CP086372.1 Protein Homology CDS 4414070 4416244 . - 0 ID=cds-LNP58_RS20715;Parent=gene-LNP58_RS20715;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113230.1;locus_tag=LNP58_RS20715;product=M3 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4416486 4416971 . + . ID=gene-LNP58_RS20720;Name=LNP58_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20720;old_locus_tag=LNP58_20680 NZ_CP086372.1 Protein Homology CDS 4416486 4416971 . + 0 ID=cds-WP_011259009.1;Parent=gene-LNP58_RS20720;Dbxref=Genbank:WP_011259009.1;Name=WP_011259009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571409.1;locus_tag=LNP58_RS20720;product=glutathione peroxidase;protein_id=WP_011259009.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4417122 4417901 . - . ID=gene-LNP58_RS20725;Name=LNP58_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20725;old_locus_tag=LNP58_20685 NZ_CP086372.1 Protein Homology CDS 4417122 4417901 . - 0 ID=cds-WP_011408551.1;Parent=gene-LNP58_RS20725;Dbxref=Genbank:WP_011408551.1;Name=WP_011408551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=LNP58_RS20725;product=ferredoxin--NADP reductase;protein_id=WP_011408551.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4418090 4419970 . - . ID=gene-LNP58_RS20730;Name=LNP58_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20730;old_locus_tag=LNP58_20690 NZ_CP086372.1 Protein Homology CDS 4418090 4419970 . - 0 ID=cds-WP_012444869.1;Parent=gene-LNP58_RS20730;Dbxref=Genbank:WP_012444869.1;Name=WP_012444869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911790.1;locus_tag=LNP58_RS20730;product=ABC transporter ATP-binding protein;protein_id=WP_012444869.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4420304 4421821 . + . ID=gene-LNP58_RS20735;Name=LNP58_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20735;old_locus_tag=LNP58_20695 NZ_CP086372.1 Protein Homology CDS 4420304 4421821 . + 0 ID=cds-WP_011259006.1;Parent=gene-LNP58_RS20735;Dbxref=Genbank:WP_011259006.1;Name=WP_011259006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=LNP58_RS20735;product=fumarate hydratase;protein_id=WP_011259006.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4421958 4422592 . + . ID=gene-LNP58_RS20740;Name=LNP58_RS20740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20740;old_locus_tag=LNP58_20700;pseudo=true NZ_CP086372.1 Protein Homology CDS 4421958 4422592 . + 0 ID=cds-LNP58_RS20740;Parent=gene-LNP58_RS20740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483541.1;locus_tag=LNP58_RS20740;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4422883 4422958 . - . ID=gene-LNP58_RS20745;Name=LNP58_RS20745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS20745;old_locus_tag=LNP58_20705 NZ_CP086372.1 cmsearch ncRNA 4422883 4422958 . - . ID=rna-LNP58_RS20745;Parent=gene-LNP58_RS20745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20745;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4422883 4422958 . - . ID=exon-LNP58_RS20745-1;Parent=rna-LNP58_RS20745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20745;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4423021 4424154 . - . ID=gene-LNP58_RS20750;Name=LNP58_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20750;old_locus_tag=LNP58_20710 NZ_CP086372.1 Protein Homology CDS 4423021 4424154 . - 0 ID=cds-WP_011408549.1;Parent=gene-LNP58_RS20750;Dbxref=Genbank:WP_011408549.1;Name=WP_011408549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911798.1;locus_tag=LNP58_RS20750;product=phospholipase A;protein_id=WP_011408549.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4424597 4425205 . + . ID=gene-LNP58_RS23445;Name=LNP58_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23445 NZ_CP086372.1 Protein Homology CDS 4424597 4425205 . + 0 ID=cds-WP_230455230.1;Parent=gene-LNP58_RS23445;Dbxref=Genbank:WP_230455230.1;Name=WP_230455230.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LNP58_RS23445;product=IS630 family transposase;protein_id=WP_230455230.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4425139 4425555 . + . ID=gene-LNP58_RS23450;Name=LNP58_RS23450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23450;partial=true;pseudo=true;start_range=.,4425139 NZ_CP086372.1 Protein Homology CDS 4425139 4425555 . + 0 ID=cds-LNP58_RS23450;Parent=gene-LNP58_RS23450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LNP58_RS23450;partial=true;product=transposase;pseudo=true;start_range=.,4425139;transl_table=11 NZ_CP086372.1 RefSeq gene 4425702 4426736 . + . ID=gene-LNP58_RS20760;Name=xopT;gbkey=Gene;gene=xopT;gene_biotype=protein_coding;locus_tag=LNP58_RS20760;old_locus_tag=LNP58_20720 NZ_CP086372.1 Protein Homology CDS 4425702 4426736 . + 0 ID=cds-WP_196220329.1;Parent=gene-LNP58_RS20760;Dbxref=Genbank:WP_196220329.1;Name=WP_196220329.1;gbkey=CDS;gene=xopT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_199285673.1;locus_tag=LNP58_RS20760;product=hypothetical protein;protein_id=WP_196220329.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4426857 4427444 . + . ID=gene-LNP58_RS20765;Name=LNP58_RS20765;end_range=4427444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20765;old_locus_tag=LNP58_20725;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4426857 4427444 . + 0 ID=cds-LNP58_RS20765;Parent=gene-LNP58_RS20765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4427444,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS20765;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4427500 4428474 . - . ID=gene-LNP58_RS20770;Name=LNP58_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20770;old_locus_tag=LNP58_20730 NZ_CP086372.1 Protein Homology CDS 4427500 4428474 . - 0 ID=cds-WP_011259000.1;Parent=gene-LNP58_RS20770;Dbxref=Genbank:WP_011259000.1;Name=WP_011259000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503843.1;locus_tag=LNP58_RS20770;product=GGDEF domain-containing protein;protein_id=WP_011259000.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4428590 4428874 . + . ID=gene-LNP58_RS20775;Name=LNP58_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20775;old_locus_tag=LNP58_20735 NZ_CP086372.1 Protein Homology CDS 4428590 4428874 . + 0 ID=cds-WP_042464872.1;Parent=gene-LNP58_RS20775;Dbxref=Genbank:WP_042464872.1;Name=WP_042464872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366326.1;locus_tag=LNP58_RS20775;product=hypothetical protein;protein_id=WP_042464872.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4429071 4430724 . - . ID=gene-LNP58_RS20780;Name=LNP58_RS20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20780;old_locus_tag=LNP58_20740;pseudo=true NZ_CP086372.1 Protein Homology CDS 4429071 4430724 . - 0 ID=cds-LNP58_RS20780;Parent=gene-LNP58_RS20780;Note=frameshifted%3B internal stop;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380255.1;locus_tag=LNP58_RS20780;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4430769 4431532 . - . ID=gene-LNP58_RS20785;Name=LNP58_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20785;old_locus_tag=LNP58_20745 NZ_CP086372.1 Protein Homology CDS 4431217 4431532 . - 0 ID=cds-WP_094187715.1-12;Parent=gene-LNP58_RS20785;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS20785;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4430769 4431217 . - 2 ID=cds-WP_094187715.1-12;Parent=gene-LNP58_RS20785;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS20785;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4431617 4432424 . + . ID=gene-LNP58_RS20790;Name=LNP58_RS20790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20790;old_locus_tag=LNP58_20750;pseudo=true NZ_CP086372.1 Protein Homology CDS 4431617 4432424 . + 0 ID=cds-LNP58_RS20790;Parent=gene-LNP58_RS20790;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=LNP58_RS20790;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4433098 4436493 . - . ID=gene-LNP58_RS20795;Name=LNP58_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20795;old_locus_tag=LNP58_20755 NZ_CP086372.1 Protein Homology CDS 4433098 4436493 . - 0 ID=cds-WP_011408539.1;Parent=gene-LNP58_RS20795;Dbxref=Genbank:WP_011408539.1;Name=WP_011408539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157546.1;locus_tag=LNP58_RS20795;product=PAS domain S-box protein;protein_id=WP_011408539.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4436708 4437088 . - . ID=gene-LNP58_RS20800;Name=LNP58_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20800;old_locus_tag=LNP58_20760 NZ_CP086372.1 Protein Homology CDS 4436708 4437088 . - 0 ID=cds-WP_011258994.1;Parent=gene-LNP58_RS20800;Dbxref=Genbank:WP_011258994.1;Name=WP_011258994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258994.1;locus_tag=LNP58_RS20800;product=response regulator;protein_id=WP_011258994.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4437227 4437313 . + . ID=gene-LNP58_RS20805;Name=LNP58_RS20805;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20805;old_locus_tag=LNP58_20765 NZ_CP086372.1 tRNAscan-SE tRNA 4437227 4437313 . + . ID=rna-LNP58_RS20805;Parent=gene-LNP58_RS20805;anticodon=(pos:4437261..4437263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20805;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 4437227 4437313 . + . ID=exon-LNP58_RS20805-1;Parent=rna-LNP58_RS20805;anticodon=(pos:4437261..4437263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20805;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 4437676 4438107 . + . ID=gene-LNP58_RS20810;Name=LNP58_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20810;old_locus_tag=LNP58_20770 NZ_CP086372.1 Protein Homology CDS 4437676 4438107 . + 0 ID=cds-WP_011408538.1;Parent=gene-LNP58_RS20810;Dbxref=Genbank:WP_011408538.1;Name=WP_011408538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407513.1;locus_tag=LNP58_RS20810;product=hypothetical protein;protein_id=WP_011408538.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4438104 4438307 . + . ID=gene-LNP58_RS20815;Name=LNP58_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20815;old_locus_tag=LNP58_20775 NZ_CP086372.1 GeneMarkS-2+ CDS 4438104 4438307 . + 0 ID=cds-WP_027703995.1;Parent=gene-LNP58_RS20815;Dbxref=Genbank:WP_027703995.1;Name=WP_027703995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS20815;product=hypothetical protein;protein_id=WP_027703995.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4438331 4439713 . - . ID=gene-LNP58_RS20820;Name=LNP58_RS20820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20820;old_locus_tag=LNP58_20780;pseudo=true NZ_CP086372.1 Protein Homology CDS 4438331 4439713 . - 0 ID=cds-LNP58_RS20820;Parent=gene-LNP58_RS20820;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS20820;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4439934 4440593 . - . ID=gene-LNP58_RS20825;Name=LNP58_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20825;old_locus_tag=LNP58_20785 NZ_CP086372.1 Protein Homology CDS 4439934 4440593 . - 0 ID=cds-WP_011408535.1;Parent=gene-LNP58_RS20825;Dbxref=Genbank:WP_011408535.1;Name=WP_011408535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482798.1;locus_tag=LNP58_RS20825;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_011408535.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4440649 4442565 . - . ID=gene-LNP58_RS20830;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LNP58_RS20830;old_locus_tag=LNP58_20790 NZ_CP086372.1 Protein Homology CDS 4440649 4442565 . - 0 ID=cds-WP_011258990.1;Parent=gene-LNP58_RS20830;Dbxref=Genbank:WP_011258990.1;Name=WP_011258990.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472018.1;locus_tag=LNP58_RS20830;product=phosphogluconate dehydratase;protein_id=WP_011258990.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4442668 4443387 . - . ID=gene-LNP58_RS20835;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LNP58_RS20835;old_locus_tag=LNP58_20795 NZ_CP086372.1 Protein Homology CDS 4442668 4443387 . - 0 ID=cds-WP_011258989.1;Parent=gene-LNP58_RS20835;Dbxref=Genbank:WP_011258989.1;Name=WP_011258989.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258989.1;locus_tag=LNP58_RS20835;product=6-phosphogluconolactonase;protein_id=WP_011258989.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4443384 4444391 . - . ID=gene-LNP58_RS20840;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LNP58_RS20840;old_locus_tag=LNP58_20800 NZ_CP086372.1 Protein Homology CDS 4443384 4444391 . - 0 ID=cds-WP_011258988.1;Parent=gene-LNP58_RS20840;Dbxref=Genbank:WP_011258988.1;Name=WP_011258988.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802227.1;locus_tag=LNP58_RS20840;product=glucokinase;protein_id=WP_011258988.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4444388 4445818 . - . ID=gene-LNP58_RS20845;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LNP58_RS20845;old_locus_tag=LNP58_20805 NZ_CP086372.1 Protein Homology CDS 4444388 4445818 . - 0 ID=cds-WP_011408534.1;Parent=gene-LNP58_RS20845;Dbxref=Genbank:WP_011408534.1;Name=WP_011408534.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945345.1;locus_tag=LNP58_RS20845;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011408534.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4446287 4447384 . + . ID=gene-LNP58_RS20850;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LNP58_RS20850;old_locus_tag=LNP58_20810 NZ_CP086372.1 Protein Homology CDS 4446287 4447384 . + 0 ID=cds-WP_011258986.1;Parent=gene-LNP58_RS20850;Dbxref=Genbank:WP_011258986.1;Name=WP_011258986.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503506.1;locus_tag=LNP58_RS20850;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_011258986.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4447434 4447508 . + . ID=gene-LNP58_RS20855;Name=LNP58_RS20855;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS20855;old_locus_tag=LNP58_20815 NZ_CP086372.1 cmsearch ncRNA 4447434 4447508 . + . ID=rna-LNP58_RS20855;Parent=gene-LNP58_RS20855;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20855;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4447434 4447508 . + . ID=exon-LNP58_RS20855-1;Parent=rna-LNP58_RS20855;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS20855;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4447513 4448385 . - . ID=gene-LNP58_RS20860;Name=LNP58_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20860;old_locus_tag=LNP58_20820 NZ_CP086372.1 Protein Homology CDS 4447513 4448385 . - 0 ID=cds-WP_011408533.1;Parent=gene-LNP58_RS20860;Dbxref=Genbank:WP_011408533.1;Name=WP_011408533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300222.1;locus_tag=LNP58_RS20860;product=folate-binding protein YgfZ;protein_id=WP_011408533.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4448287 4448595 . + . ID=gene-LNP58_RS20865;Name=LNP58_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20865;old_locus_tag=LNP58_20825 NZ_CP086372.1 Protein Homology CDS 4448287 4448595 . + 0 ID=cds-WP_228329617.1;Parent=gene-LNP58_RS20865;Dbxref=Genbank:WP_228329617.1;Name=WP_228329617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090240.1;locus_tag=LNP58_RS20865;product=DUF1674 domain-containing protein;protein_id=WP_228329617.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4448655 4449050 . + . ID=gene-LNP58_RS20870;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LNP58_RS20870;old_locus_tag=LNP58_20830 NZ_CP086372.1 Protein Homology CDS 4448655 4449050 . + 0 ID=cds-WP_011258985.1;Parent=gene-LNP58_RS20870;Dbxref=Genbank:WP_011258985.1;Name=WP_011258985.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090241.1;locus_tag=LNP58_RS20870;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_011258985.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4449047 4449433 . + . ID=gene-LNP58_RS20875;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LNP58_RS20875;old_locus_tag=LNP58_20835 NZ_CP086372.1 Protein Homology CDS 4449047 4449433 . + 0 ID=cds-WP_011258984.1;Parent=gene-LNP58_RS20875;Dbxref=Genbank:WP_011258984.1;Name=WP_011258984.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995651.1;locus_tag=LNP58_RS20875;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_011258984.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4449468 4451258 . + . ID=gene-LNP58_RS20880;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LNP58_RS20880;old_locus_tag=LNP58_20840 NZ_CP086372.1 Protein Homology CDS 4449468 4451258 . + 0 ID=cds-WP_011258983.1;Parent=gene-LNP58_RS20880;Dbxref=Genbank:WP_011258983.1;Name=WP_011258983.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=LNP58_RS20880;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_011258983.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4451268 4451471 . + . ID=gene-LNP58_RS20885;Name=LNP58_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20885;old_locus_tag=LNP58_20845 NZ_CP086372.1 Protein Homology CDS 4451268 4451471 . + 0 ID=cds-WP_027703324.1;Parent=gene-LNP58_RS20885;Dbxref=Genbank:WP_027703324.1;Name=WP_027703324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167450.1;locus_tag=LNP58_RS20885;product=hypothetical protein;protein_id=WP_027703324.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4451488 4452270 . + . ID=gene-LNP58_RS20890;Name=LNP58_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20890;old_locus_tag=LNP58_20850 NZ_CP086372.1 Protein Homology CDS 4451488 4452270 . + 0 ID=cds-WP_011408532.1;Parent=gene-LNP58_RS20890;Dbxref=Genbank:WP_011408532.1;Name=WP_011408532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037280.1;locus_tag=LNP58_RS20890;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_011408532.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4452381 4452629 . + . ID=gene-LNP58_RS20895;Name=LNP58_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20895;old_locus_tag=LNP58_20855 NZ_CP086372.1 Protein Homology CDS 4452381 4452629 . + 0 ID=cds-WP_011408531.1;Parent=gene-LNP58_RS20895;Dbxref=Genbank:WP_011408531.1;Name=WP_011408531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=LNP58_RS20895;product=succinate dehydrogenase assembly factor 2;protein_id=WP_011408531.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4452580 4453032 . + . ID=gene-LNP58_RS20900;Name=LNP58_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20900;old_locus_tag=LNP58_20860 NZ_CP086372.1 Protein Homology CDS 4452580 4453032 . + 0 ID=cds-WP_014503500.1;Parent=gene-LNP58_RS20900;Dbxref=Genbank:WP_014503500.1;Name=WP_014503500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156610.1;locus_tag=LNP58_RS20900;product=hypothetical protein;protein_id=WP_014503500.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4453056 4454297 . + . ID=gene-LNP58_RS20905;Name=LNP58_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20905;old_locus_tag=LNP58_20865 NZ_CP086372.1 Protein Homology CDS 4453056 4454297 . + 0 ID=cds-WP_010378794.1;Parent=gene-LNP58_RS20905;Dbxref=Genbank:WP_010378794.1;Name=WP_010378794.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=LNP58_RS20905;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_010378794.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4454290 4455024 . + . ID=gene-LNP58_RS20910;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LNP58_RS20910;old_locus_tag=LNP58_20870 NZ_CP086372.1 Protein Homology CDS 4454290 4455024 . + 0 ID=cds-WP_011258980.1;Parent=gene-LNP58_RS20910;Dbxref=Genbank:WP_011258980.1;Name=WP_011258980.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472015.1;locus_tag=LNP58_RS20910;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_011258980.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4455197 4456261 . - . ID=gene-LNP58_RS20915;Name=LNP58_RS20915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20915;old_locus_tag=LNP58_20875;pseudo=true NZ_CP086372.1 Protein Homology CDS 4455197 4456261 . - 0 ID=cds-LNP58_RS20915;Parent=gene-LNP58_RS20915;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303656.1;locus_tag=LNP58_RS20915;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4456418 4457383 . - . ID=gene-LNP58_RS20920;Name=LNP58_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20920;old_locus_tag=LNP58_20880 NZ_CP086372.1 Protein Homology CDS 4456418 4457383 . - 0 ID=cds-WP_109181948.1-2;Parent=gene-LNP58_RS20920;Dbxref=Genbank:WP_109181948.1;Name=WP_109181948.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS20920;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181948.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4457637 4460180 . + . ID=gene-LNP58_RS20925;Name=LNP58_RS20925;end_range=4460180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS20925;old_locus_tag=LNP58_20885;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4457637 4460180 . + 0 ID=cds-LNP58_RS20925;Parent=gene-LNP58_RS20925;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009290,GO:0005215;end_range=4460180,.;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167829.1;locus_tag=LNP58_RS20925;partial=true;product=DNA internalization-related competence protein ComEC/Rec2;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4460074 4460736 . + . ID=gene-LNP58_RS20930;Name=LNP58_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20930;old_locus_tag=LNP58_20890 NZ_CP086372.1 Protein Homology CDS 4460074 4460736 . + 0 ID=cds-WP_011408526.1;Parent=gene-LNP58_RS20930;Dbxref=Genbank:WP_011408526.1;Name=WP_011408526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916730.1;locus_tag=LNP58_RS20930;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011408526.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4460740 4461204 . + . ID=gene-LNP58_RS20935;Name=LNP58_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20935;old_locus_tag=LNP58_20895 NZ_CP086372.1 Protein Homology CDS 4460740 4461204 . + 0 ID=cds-WP_011258975.1;Parent=gene-LNP58_RS20935;Dbxref=Genbank:WP_011258975.1;Name=WP_011258975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115686.1;locus_tag=LNP58_RS20935;product=biopolymer transporter ExbD;protein_id=WP_011258975.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4461201 4462970 . + . ID=gene-LNP58_RS20940;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LNP58_RS20940;old_locus_tag=LNP58_20900 NZ_CP086372.1 Protein Homology CDS 4461201 4462970 . + 0 ID=cds-WP_011258974.1;Parent=gene-LNP58_RS20940;Dbxref=Genbank:WP_011258974.1;Name=WP_011258974.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158537.1;locus_tag=LNP58_RS20940;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_011258974.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4462967 4464007 . + . ID=gene-LNP58_RS20945;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LNP58_RS20945;old_locus_tag=LNP58_20905 NZ_CP086372.1 Protein Homology CDS 4462967 4464007 . + 0 ID=cds-WP_011258973.1;Parent=gene-LNP58_RS20945;Dbxref=Genbank:WP_011258973.1;Name=WP_011258973.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449592.1;locus_tag=LNP58_RS20945;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_011258973.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4464299 4465078 . + . ID=gene-LNP58_RS20950;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LNP58_RS20950;old_locus_tag=LNP58_20910 NZ_CP086372.1 Protein Homology CDS 4464299 4465078 . + 0 ID=cds-WP_011258972.1;Parent=gene-LNP58_RS20950;Dbxref=Genbank:WP_011258972.1;Name=WP_011258972.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373332.1;locus_tag=LNP58_RS20950;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_011258972.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4465075 4465539 . + . ID=gene-LNP58_RS20955;Name=LNP58_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20955;old_locus_tag=LNP58_20915 NZ_CP086372.1 Protein Homology CDS 4465075 4465539 . + 0 ID=cds-WP_011258971.1;Parent=gene-LNP58_RS20955;Dbxref=Genbank:WP_011258971.1;Name=WP_011258971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916712.1;locus_tag=LNP58_RS20955;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_011258971.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4465563 4466981 . + . ID=gene-LNP58_RS20960;Name=LNP58_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20960;old_locus_tag=LNP58_20920 NZ_CP086372.1 Protein Homology CDS 4465563 4466981 . + 0 ID=cds-WP_011258970.1;Parent=gene-LNP58_RS20960;Dbxref=Genbank:WP_011258970.1;Name=WP_011258970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113177.1;locus_tag=LNP58_RS20960;product=hypothetical protein;protein_id=WP_011258970.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4466978 4468834 . + . ID=gene-LNP58_RS20965;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LNP58_RS20965;old_locus_tag=LNP58_20925 NZ_CP086372.1 Protein Homology CDS 4466978 4468834 . + 0 ID=cds-WP_011258969.1;Parent=gene-LNP58_RS20965;Dbxref=Genbank:WP_011258969.1;Name=WP_011258969.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237626.1;locus_tag=LNP58_RS20965;product=excinuclease ABC subunit UvrC;protein_id=WP_011258969.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4468834 4469466 . + . ID=gene-LNP58_RS20970;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LNP58_RS20970;old_locus_tag=LNP58_20930 NZ_CP086372.1 Protein Homology CDS 4468834 4469466 . + 0 ID=cds-WP_011258968.1;Parent=gene-LNP58_RS20970;Dbxref=Genbank:WP_011258968.1;Name=WP_011258968.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995682.1;locus_tag=LNP58_RS20970;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_011258968.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4469503 4469578 . + . ID=gene-LNP58_RS20975;Name=LNP58_RS20975;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20975;old_locus_tag=LNP58_20935 NZ_CP086372.1 tRNAscan-SE tRNA 4469503 4469578 . + . ID=rna-LNP58_RS20975;Parent=gene-LNP58_RS20975;anticodon=(pos:4469536..4469538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20975;product=tRNA-Gly NZ_CP086372.1 tRNAscan-SE exon 4469503 4469578 . + . ID=exon-LNP58_RS20975-1;Parent=rna-LNP58_RS20975;anticodon=(pos:4469536..4469538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20975;product=tRNA-Gly NZ_CP086372.1 RefSeq gene 4469647 4469720 . + . ID=gene-LNP58_RS20980;Name=LNP58_RS20980;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20980;old_locus_tag=LNP58_20940 NZ_CP086372.1 tRNAscan-SE tRNA 4469647 4469720 . + . ID=rna-LNP58_RS20980;Parent=gene-LNP58_RS20980;anticodon=(pos:4469679..4469681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20980;product=tRNA-Cys NZ_CP086372.1 tRNAscan-SE exon 4469647 4469720 . + . ID=exon-LNP58_RS20980-1;Parent=rna-LNP58_RS20980;anticodon=(pos:4469679..4469681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20980;product=tRNA-Cys NZ_CP086372.1 RefSeq gene 4469803 4469878 . + . ID=gene-LNP58_RS20985;Name=LNP58_RS20985;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS20985;old_locus_tag=LNP58_20945 NZ_CP086372.1 tRNAscan-SE tRNA 4469803 4469878 . + . ID=rna-LNP58_RS20985;Parent=gene-LNP58_RS20985;anticodon=(pos:4469836..4469838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20985;product=tRNA-Gly NZ_CP086372.1 tRNAscan-SE exon 4469803 4469878 . + . ID=exon-LNP58_RS20985-1;Parent=rna-LNP58_RS20985;anticodon=(pos:4469836..4469838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS20985;product=tRNA-Gly NZ_CP086372.1 RefSeq gene 4469941 4470543 . - . ID=gene-LNP58_RS20990;Name=LNP58_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20990;old_locus_tag=LNP58_20950 NZ_CP086372.1 Protein Homology CDS 4469941 4470543 . - 0 ID=cds-WP_228329618.1;Parent=gene-LNP58_RS20990;Dbxref=Genbank:WP_228329618.1;Name=WP_228329618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444921.1;locus_tag=LNP58_RS20990;product=VOC family protein;protein_id=WP_228329618.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4470614 4471513 . - . ID=gene-LNP58_RS20995;Name=LNP58_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS20995;old_locus_tag=LNP58_20955 NZ_CP086372.1 Protein Homology CDS 4470614 4471513 . - 0 ID=cds-WP_041182131.1;Parent=gene-LNP58_RS20995;Dbxref=Genbank:WP_041182131.1;Name=WP_041182131.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444922.1;locus_tag=LNP58_RS20995;product=IS30 family transposase;protein_id=WP_041182131.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4471564 4472748 . + . ID=gene-LNP58_RS21000;Name=LNP58_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21000;old_locus_tag=LNP58_20960 NZ_CP086372.1 Protein Homology CDS 4471564 4472748 . + 0 ID=cds-WP_011408522.1;Parent=gene-LNP58_RS21000;Dbxref=Genbank:WP_011408522.1;Name=WP_011408522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS21000;product=IS256-like element IS1113 family transposase;protein_id=WP_011408522.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4472783 4472884 . - . ID=gene-LNP58_RS21005;Name=LNP58_RS21005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21005;old_locus_tag=LNP58_20965;partial=true;pseudo=true;start_range=.,4472783 NZ_CP086372.1 Protein Homology CDS 4472783 4472884 . - 0 ID=cds-LNP58_RS21005;Parent=gene-LNP58_RS21005;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=LNP58_RS21005;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4472783;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4473146 4474054 . - . ID=gene-LNP58_RS21010;Name=LNP58_RS21010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21010;old_locus_tag=LNP58_20970;partial=true;pseudo=true;start_range=.,4473146 NZ_CP086372.1 Protein Homology CDS 4473146 4474054 . - 0 ID=cds-LNP58_RS21010;Parent=gene-LNP58_RS21010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=LNP58_RS21010;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4473146;transl_table=11 NZ_CP086372.1 RefSeq gene 4474149 4478165 . - . ID=gene-LNP58_RS21015;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21015;old_locus_tag=LNP58_20975 NZ_CP086372.1 Protein Homology CDS 4474149 4478165 . - 0 ID=cds-WP_228329619.1;Parent=gene-LNP58_RS21015;Dbxref=Genbank:WP_228329619.1;Name=WP_228329619.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21015;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329619.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4478390 4478689 . - . ID=gene-LNP58_RS21020;Name=LNP58_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21020;old_locus_tag=LNP58_20980 NZ_CP086372.1 Protein Homology CDS 4478390 4478689 . - 0 ID=cds-WP_011408491.1-2;Parent=gene-LNP58_RS21020;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS21020;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4478693 4478887 . - . ID=gene-LNP58_RS21025;Name=LNP58_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21025;old_locus_tag=LNP58_20985 NZ_CP086372.1 GeneMarkS-2+ CDS 4478693 4478887 . - 0 ID=cds-WP_042464821.1-2;Parent=gene-LNP58_RS21025;Dbxref=Genbank:WP_042464821.1;Name=WP_042464821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21025;product=hypothetical protein;protein_id=WP_042464821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4479118 4479881 . - . ID=gene-LNP58_RS21030;Name=LNP58_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21030;old_locus_tag=LNP58_20990 NZ_CP086372.1 Protein Homology CDS 4479566 4479881 . - 0 ID=cds-WP_094187715.1-13;Parent=gene-LNP58_RS21030;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21030;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4479118 4479566 . - 2 ID=cds-WP_094187715.1-13;Parent=gene-LNP58_RS21030;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21030;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4479971 4483726 . - . ID=gene-LNP58_RS21035;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21035;old_locus_tag=LNP58_20995 NZ_CP086372.1 Protein Homology CDS 4479971 4483726 . - 0 ID=cds-WP_069964534.1;Parent=gene-LNP58_RS21035;Dbxref=Genbank:WP_069964534.1;Name=WP_069964534.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21035;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_069964534.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4483950 4484249 . - . ID=gene-LNP58_RS21040;Name=LNP58_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21040;old_locus_tag=LNP58_21000 NZ_CP086372.1 Protein Homology CDS 4483950 4484249 . - 0 ID=cds-WP_011408491.1-3;Parent=gene-LNP58_RS21040;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS21040;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4484253 4484447 . - . ID=gene-LNP58_RS21045;Name=LNP58_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21045;old_locus_tag=LNP58_21005 NZ_CP086372.1 GeneMarkS-2+ CDS 4484253 4484447 . - 0 ID=cds-WP_041182100.1-2;Parent=gene-LNP58_RS21045;Dbxref=Genbank:WP_041182100.1;Name=WP_041182100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21045;product=hypothetical protein;protein_id=WP_041182100.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4484716 4488429 . - . ID=gene-LNP58_RS21050;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21050;old_locus_tag=LNP58_21010 NZ_CP086372.1 Protein Homology CDS 4484716 4488429 . - 0 ID=cds-WP_011408518.1;Parent=gene-LNP58_RS21050;Dbxref=Genbank:WP_011408518.1;Name=WP_011408518.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21050;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_011408518.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4488772 4488975 . + . ID=gene-LNP58_RS21055;Name=LNP58_RS21055;end_range=4488975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21055;old_locus_tag=LNP58_21015;partial=true;pseudo=true;start_range=.,4488772 NZ_CP086372.1 Protein Homology CDS 4488772 4488975 . + 0 ID=cds-LNP58_RS21055;Parent=gene-LNP58_RS21055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4488975,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012701750.1;locus_tag=LNP58_RS21055;partial=true;product=transposase;pseudo=true;start_range=.,4488772;transl_table=11 NZ_CP086372.1 RefSeq gene 4489734 4490497 . - . ID=gene-LNP58_RS21060;Name=LNP58_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21060;old_locus_tag=LNP58_21020 NZ_CP086372.1 Protein Homology CDS 4490182 4490497 . - 0 ID=cds-WP_109181945.1-2;Parent=gene-LNP58_RS21060;Dbxref=Genbank:WP_109181945.1;Name=WP_109181945.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21060;product=IS5 family transposase;protein_id=WP_109181945.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4489734 4490182 . - 2 ID=cds-WP_109181945.1-2;Parent=gene-LNP58_RS21060;Dbxref=Genbank:WP_109181945.1;Name=WP_109181945.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21060;product=IS5 family transposase;protein_id=WP_109181945.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4490628 4491140 . + . ID=gene-LNP58_RS21065;Name=LNP58_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21065;old_locus_tag=LNP58_21025 NZ_CP086372.1 GeneMarkS-2+ CDS 4490628 4491140 . + 0 ID=cds-WP_011408516.1;Parent=gene-LNP58_RS21065;Dbxref=Genbank:WP_011408516.1;Name=WP_011408516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21065;product=hypothetical protein;protein_id=WP_011408516.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4491754 4492077 . - . ID=gene-LNP58_RS21070;Name=LNP58_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21070;old_locus_tag=LNP58_21030 NZ_CP086372.1 GeneMarkS-2+ CDS 4491754 4492077 . - 0 ID=cds-WP_125168752.1;Parent=gene-LNP58_RS21070;Dbxref=Genbank:WP_125168752.1;Name=WP_125168752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21070;product=hypothetical protein;protein_id=WP_125168752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4492581 4493344 . - . ID=gene-LNP58_RS21075;Name=LNP58_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21075;old_locus_tag=LNP58_21035 NZ_CP086372.1 Protein Homology CDS 4493029 4493344 . - 0 ID=cds-WP_094187780.1-2;Parent=gene-LNP58_RS21075;Dbxref=Genbank:WP_094187780.1;Name=WP_094187780.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21075;product=IS5 family transposase;protein_id=WP_094187780.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4492581 4493029 . - 2 ID=cds-WP_094187780.1-2;Parent=gene-LNP58_RS21075;Dbxref=Genbank:WP_094187780.1;Name=WP_094187780.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS21075;product=IS5 family transposase;protein_id=WP_094187780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4493426 4493725 . + . ID=gene-LNP58_RS21080;Name=LNP58_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21080;old_locus_tag=LNP58_21040 NZ_CP086372.1 GeneMarkS-2+ CDS 4493426 4493725 . + 0 ID=cds-WP_144408325.1;Parent=gene-LNP58_RS21080;Dbxref=Genbank:WP_144408325.1;Name=WP_144408325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21080;product=hypothetical protein;protein_id=WP_144408325.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4493847 4494029 . + . ID=gene-LNP58_RS21085;Name=LNP58_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21085;old_locus_tag=LNP58_21045 NZ_CP086372.1 Protein Homology CDS 4493847 4494029 . + 0 ID=cds-WP_011408511.1;Parent=gene-LNP58_RS21085;Dbxref=Genbank:WP_011408511.1;Name=WP_011408511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408511.1;locus_tag=LNP58_RS21085;product=hypothetical protein;protein_id=WP_011408511.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4494154 4494783 . - . ID=gene-LNP58_RS21090;Name=LNP58_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21090;old_locus_tag=LNP58_21050 NZ_CP086372.1 Protein Homology CDS 4494154 4494783 . - 0 ID=cds-WP_069970101.1;Parent=gene-LNP58_RS21090;Dbxref=Genbank:WP_069970101.1;Name=WP_069970101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LNP58_RS21090;product=DUF3693 domain-containing protein;protein_id=WP_069970101.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4495096 4495308 . + . ID=gene-LNP58_RS21095;Name=LNP58_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21095;old_locus_tag=LNP58_21055 NZ_CP086372.1 Protein Homology CDS 4495096 4495308 . + 0 ID=cds-WP_011408508.1;Parent=gene-LNP58_RS21095;Dbxref=Genbank:WP_011408508.1;Name=WP_011408508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378733.1;locus_tag=LNP58_RS21095;product=hypothetical protein;protein_id=WP_011408508.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4495289 4495474 . - . ID=gene-LNP58_RS21100;Name=LNP58_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21100;old_locus_tag=LNP58_21060 NZ_CP086372.1 GeneMarkS-2+ CDS 4495289 4495474 . - 0 ID=cds-WP_134953795.1;Parent=gene-LNP58_RS21100;Dbxref=Genbank:WP_134953795.1;Name=WP_134953795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21100;product=hypothetical protein;protein_id=WP_134953795.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4495560 4496501 . + . ID=gene-LNP58_RS21105;Name=LNP58_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21105;old_locus_tag=LNP58_21065 NZ_CP086372.1 Protein Homology CDS 4495560 4496501 . + 0 ID=cds-WP_069959851.1;Parent=gene-LNP58_RS21105;Dbxref=Genbank:WP_069959851.1;Name=WP_069959851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154894.1;locus_tag=LNP58_RS21105;product=inovirus-type Gp2 protein;protein_id=WP_069959851.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4496513 4496794 . + . ID=gene-LNP58_RS21110;Name=LNP58_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21110;old_locus_tag=LNP58_21070 NZ_CP086372.1 Protein Homology CDS 4496513 4496794 . + 0 ID=cds-WP_228329620.1;Parent=gene-LNP58_RS21110;Dbxref=Genbank:WP_228329620.1;Name=WP_228329620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113168.1;locus_tag=LNP58_RS21110;product=G5P family DNA-binding protein;protein_id=WP_228329620.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4496798 4497001 . + . ID=gene-LNP58_RS21115;Name=LNP58_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21115;old_locus_tag=LNP58_21075 NZ_CP086372.1 Protein Homology CDS 4496798 4497001 . + 0 ID=cds-WP_042464854.1;Parent=gene-LNP58_RS21115;Dbxref=Genbank:WP_042464854.1;Name=WP_042464854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303325.1;locus_tag=LNP58_RS21115;product=hypothetical protein;protein_id=WP_042464854.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4497013 4497243 . + . ID=gene-LNP58_RS21120;Name=LNP58_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21120;old_locus_tag=LNP58_21080 NZ_CP086372.1 Protein Homology CDS 4497013 4497243 . + 0 ID=cds-WP_011347634.1;Parent=gene-LNP58_RS21120;Dbxref=Genbank:WP_011347634.1;Name=WP_011347634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347634.1;locus_tag=LNP58_RS21120;product=major capsid protein;protein_id=WP_011347634.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4497824 4498786 . + . ID=gene-LNP58_RS21125;Name=LNP58_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21125;old_locus_tag=LNP58_21085 NZ_CP086372.1 GeneMarkS-2+ CDS 4497824 4498786 . + 0 ID=cds-WP_228329621.1;Parent=gene-LNP58_RS21125;Dbxref=Genbank:WP_228329621.1;Name=WP_228329621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21125;product=hypothetical protein;protein_id=WP_228329621.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4498786 4499115 . + . ID=gene-LNP58_RS21130;Name=LNP58_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21130;old_locus_tag=LNP58_21090 NZ_CP086372.1 Protein Homology CDS 4498786 4499115 . + 0 ID=cds-WP_011408503.1;Parent=gene-LNP58_RS21130;Dbxref=Genbank:WP_011408503.1;Name=WP_011408503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916429.1;locus_tag=LNP58_RS21130;product=DUF2523 domain-containing protein;protein_id=WP_011408503.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4499166 4500308 . + . ID=gene-LNP58_RS21135;Name=LNP58_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21135;old_locus_tag=LNP58_21095 NZ_CP086372.1 Protein Homology CDS 4499166 4500308 . + 0 ID=cds-WP_229001913.1;Parent=gene-LNP58_RS21135;Dbxref=Genbank:WP_229001913.1;Name=WP_229001913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969859.1;locus_tag=LNP58_RS21135;product=zonular occludens toxin domain-containing protein;protein_id=WP_229001913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4500310 4500957 . + . ID=gene-LNP58_RS21140;Name=LNP58_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21140;old_locus_tag=LNP58_21100 NZ_CP086372.1 Protein Homology CDS 4500310 4500957 . + 0 ID=cds-WP_069959847.1;Parent=gene-LNP58_RS21140;Dbxref=Genbank:WP_069959847.1;Name=WP_069959847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347630.1;locus_tag=LNP58_RS21140;product=TraX family protein;protein_id=WP_069959847.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4501118 4501411 . + . ID=gene-LNP58_RS21145;Name=LNP58_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21145;old_locus_tag=LNP58_21105 NZ_CP086372.1 Protein Homology CDS 4501118 4501411 . + 0 ID=cds-WP_069959846.1;Parent=gene-LNP58_RS21145;Dbxref=Genbank:WP_069959846.1;Name=WP_069959846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450393.1;locus_tag=LNP58_RS21145;product=hypothetical protein;protein_id=WP_069959846.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4501467 4501679 . + . ID=gene-LNP58_RS21150;Name=LNP58_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21150;old_locus_tag=LNP58_21110 NZ_CP086372.1 GeneMarkS-2+ CDS 4501467 4501679 . + 0 ID=cds-WP_113085484.1;Parent=gene-LNP58_RS21150;Dbxref=Genbank:WP_113085484.1;Name=WP_113085484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21150;product=hypothetical protein;protein_id=WP_113085484.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4501704 4502015 . - . ID=gene-LNP58_RS21155;Name=LNP58_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21155;old_locus_tag=LNP58_21115 NZ_CP086372.1 Protein Homology CDS 4501704 4502015 . - 0 ID=cds-WP_069959845.1;Parent=gene-LNP58_RS21155;Dbxref=Genbank:WP_069959845.1;Name=WP_069959845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303305.1;locus_tag=LNP58_RS21155;product=chloride channel protein;protein_id=WP_069959845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4502297 4502680 . - . ID=gene-LNP58_RS21160;Name=LNP58_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21160;old_locus_tag=LNP58_21120 NZ_CP086372.1 Protein Homology CDS 4502297 4502680 . - 0 ID=cds-WP_075242175.1;Parent=gene-LNP58_RS21160;Dbxref=Genbank:WP_075242175.1;Name=WP_075242175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS21160;product=hypothetical protein;protein_id=WP_075242175.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4502880 4503140 . + . ID=gene-LNP58_RS21165;Name=LNP58_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21165;old_locus_tag=LNP58_21125 NZ_CP086372.1 Protein Homology CDS 4502880 4503140 . + 0 ID=cds-WP_075240059.1;Parent=gene-LNP58_RS21165;Dbxref=Genbank:WP_075240059.1;Name=WP_075240059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023792.2;locus_tag=LNP58_RS21165;product=DUF3653 domain-containing protein;protein_id=WP_075240059.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4504249 4504449 . - . ID=gene-LNP58_RS21170;Name=LNP58_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21170;old_locus_tag=LNP58_21130 NZ_CP086372.1 Protein Homology CDS 4504249 4504449 . - 0 ID=cds-WP_228329622.1;Parent=gene-LNP58_RS21170;Dbxref=Genbank:WP_228329622.1;Name=WP_228329622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.2;locus_tag=LNP58_RS21170;product=TraX family protein;protein_id=WP_228329622.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4504474 4505658 . - . ID=gene-LNP58_RS21175;Name=LNP58_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21175;old_locus_tag=LNP58_21135 NZ_CP086372.1 Protein Homology CDS 4504474 4505658 . - 0 ID=cds-WP_011258954.1;Parent=gene-LNP58_RS21175;Dbxref=Genbank:WP_011258954.1;Name=WP_011258954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490399.1;locus_tag=LNP58_RS21175;product=hypothetical protein;protein_id=WP_011258954.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4505655 4505975 . - . ID=gene-LNP58_RS21180;Name=LNP58_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21180;old_locus_tag=LNP58_21140 NZ_CP086372.1 Protein Homology CDS 4505655 4505975 . - 0 ID=cds-WP_041182119.1;Parent=gene-LNP58_RS21180;Dbxref=Genbank:WP_041182119.1;Name=WP_041182119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022194.2;locus_tag=LNP58_RS21180;product=DUF2523 family protein;protein_id=WP_041182119.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4505977 4507206 . - . ID=gene-LNP58_RS21185;Name=LNP58_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21185;old_locus_tag=LNP58_21145 NZ_CP086372.1 Protein Homology CDS 4505977 4507206 . - 0 ID=cds-WP_228329623.1;Parent=gene-LNP58_RS21185;Dbxref=Genbank:WP_228329623.1;Name=WP_228329623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490395.1;locus_tag=LNP58_RS21185;product=hypothetical protein;protein_id=WP_228329623.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4507568 4507807 . - . ID=gene-LNP58_RS21190;Name=LNP58_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21190;old_locus_tag=LNP58_21150 NZ_CP086372.1 Protein Homology CDS 4507568 4507807 . - 0 ID=cds-WP_011408495.1;Parent=gene-LNP58_RS21190;Dbxref=Genbank:WP_011408495.1;Name=WP_011408495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490393.1;locus_tag=LNP58_RS21190;product=hypothetical protein;protein_id=WP_011408495.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4508171 4508470 . - . ID=gene-LNP58_RS21195;Name=LNP58_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21195;old_locus_tag=LNP58_21155 NZ_CP086372.1 Protein Homology CDS 4508171 4508470 . - 0 ID=cds-WP_011408494.1;Parent=gene-LNP58_RS21195;Dbxref=Genbank:WP_011408494.1;Name=WP_011408494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408494.1;locus_tag=LNP58_RS21195;product=single-stranded DNA-binding protein;protein_id=WP_011408494.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4508575 4509489 . - . ID=gene-LNP58_RS21200;Name=LNP58_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21200;old_locus_tag=LNP58_21160 NZ_CP086372.1 Protein Homology CDS 4508575 4509489 . - 0 ID=cds-WP_012444936.1;Parent=gene-LNP58_RS21200;Dbxref=Genbank:WP_012444936.1;Name=WP_012444936.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258952.1;locus_tag=LNP58_RS21200;product=replication initiation factor domain-containing protein;protein_id=WP_012444936.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4509784 4509987 . - . ID=gene-LNP58_RS21205;Name=LNP58_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21205;old_locus_tag=LNP58_21165 NZ_CP086372.1 Protein Homology CDS 4509784 4509987 . - 0 ID=cds-WP_012444935.1;Parent=gene-LNP58_RS21205;Dbxref=Genbank:WP_012444935.1;Name=WP_012444935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408508.1;locus_tag=LNP58_RS21205;product=hypothetical protein;protein_id=WP_012444935.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4509987 4510172 . - . ID=gene-LNP58_RS21210;Name=LNP58_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21210;old_locus_tag=LNP58_21170 NZ_CP086372.1 Protein Homology CDS 4509987 4510172 . - 0 ID=cds-WP_041182117.1;Parent=gene-LNP58_RS21210;Dbxref=Genbank:WP_041182117.1;Name=WP_041182117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408509.1;locus_tag=LNP58_RS21210;product=hypothetical protein;protein_id=WP_041182117.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4511369 4511845 . + . ID=gene-LNP58_RS21215;Name=LNP58_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21215;old_locus_tag=LNP58_21175 NZ_CP086372.1 GeneMarkS-2+ CDS 4511369 4511845 . + 0 ID=cds-WP_229001914.1;Parent=gene-LNP58_RS21215;Dbxref=Genbank:WP_229001914.1;Name=WP_229001914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21215;product=DUF4990 domain-containing protein;protein_id=WP_229001914.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4512393 4515692 . + . ID=gene-LNP58_RS21220;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21220;old_locus_tag=LNP58_21180 NZ_CP086372.1 Protein Homology CDS 4512393 4515692 . + 0 ID=cds-WP_069959844.1;Parent=gene-LNP58_RS21220;Dbxref=Genbank:WP_069959844.1;Name=WP_069959844.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21220;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_069959844.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4515960 4516154 . + . ID=gene-LNP58_RS21225;Name=LNP58_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21225;old_locus_tag=LNP58_21185 NZ_CP086372.1 GeneMarkS-2+ CDS 4515960 4516154 . + 0 ID=cds-WP_042464821.1-3;Parent=gene-LNP58_RS21225;Dbxref=Genbank:WP_042464821.1;Name=WP_042464821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21225;product=hypothetical protein;protein_id=WP_042464821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4516158 4516457 . + . ID=gene-LNP58_RS21230;Name=LNP58_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21230;old_locus_tag=LNP58_21190 NZ_CP086372.1 Protein Homology CDS 4516158 4516457 . + 0 ID=cds-WP_011408491.1-4;Parent=gene-LNP58_RS21230;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=LNP58_RS21230;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4516682 4520536 . + . ID=gene-LNP58_RS21235;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21235;old_locus_tag=LNP58_21195 NZ_CP086372.1 Protein Homology CDS 4516682 4520536 . + 0 ID=cds-WP_069964532.1;Parent=gene-LNP58_RS21235;Dbxref=Genbank:WP_069964532.1;Name=WP_069964532.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21235;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_069964532.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4520629 4520952 . - . ID=gene-LNP58_RS21240;Name=LNP58_RS21240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21240;old_locus_tag=LNP58_21200;partial=true;pseudo=true;start_range=.,4520629 NZ_CP086372.1 Protein Homology CDS 4520629 4520952 . - 0 ID=cds-LNP58_RS21240;Parent=gene-LNP58_RS21240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=LNP58_RS21240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4520629;transl_table=11 NZ_CP086372.1 RefSeq gene 4521122 4521742 . - . ID=gene-LNP58_RS21245;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LNP58_RS21245;old_locus_tag=LNP58_21205 NZ_CP086372.1 Protein Homology CDS 4521122 4521742 . - 0 ID=cds-WP_011258948.1;Parent=gene-LNP58_RS21245;Dbxref=Genbank:WP_011258948.1;Name=WP_011258948.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507577.1;locus_tag=LNP58_RS21245;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_011258948.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4521732 4522508 . - . ID=gene-LNP58_RS21250;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LNP58_RS21250;old_locus_tag=LNP58_21210 NZ_CP086372.1 Protein Homology CDS 4521732 4522508 . - 0 ID=cds-WP_011258947.1;Parent=gene-LNP58_RS21250;Dbxref=Genbank:WP_011258947.1;Name=WP_011258947.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503177.1;locus_tag=LNP58_RS21250;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_011258947.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4522502 4523236 . - . ID=gene-LNP58_RS21255;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LNP58_RS21255;old_locus_tag=LNP58_21215 NZ_CP086372.1 Protein Homology CDS 4522502 4523236 . - 0 ID=cds-WP_011258946.1;Parent=gene-LNP58_RS21255;Dbxref=Genbank:WP_011258946.1;Name=WP_011258946.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155313.1;locus_tag=LNP58_RS21255;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_011258946.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4523233 4523835 . - . ID=gene-LNP58_RS21260;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LNP58_RS21260;old_locus_tag=LNP58_21220 NZ_CP086372.1 Protein Homology CDS 4523233 4523835 . - 0 ID=cds-WP_011258945.1;Parent=gene-LNP58_RS21260;Dbxref=Genbank:WP_011258945.1;Name=WP_011258945.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302508.1;locus_tag=LNP58_RS21260;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_011258945.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4523832 4524959 . - . ID=gene-LNP58_RS21265;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LNP58_RS21265;old_locus_tag=LNP58_21225 NZ_CP086372.1 Protein Homology CDS 4523832 4524959 . - 0 ID=cds-WP_011258944.1;Parent=gene-LNP58_RS21265;Dbxref=Genbank:WP_011258944.1;Name=WP_011258944.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571443.1;locus_tag=LNP58_RS21265;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_011258944.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4524956 4526047 . - . ID=gene-LNP58_RS21270;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LNP58_RS21270;old_locus_tag=LNP58_21230 NZ_CP086372.1 Protein Homology CDS 4524956 4526047 . - 0 ID=cds-WP_011408488.1;Parent=gene-LNP58_RS21270;Dbxref=Genbank:WP_011408488.1;Name=WP_011408488.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090046.1;locus_tag=LNP58_RS21270;product=histidinol-phosphate transaminase;protein_id=WP_011408488.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4526044 4527339 . - . ID=gene-LNP58_RS21275;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LNP58_RS21275;old_locus_tag=LNP58_21235 NZ_CP086372.1 Protein Homology CDS 4526044 4527339 . - 0 ID=cds-WP_011258942.1;Parent=gene-LNP58_RS21275;Dbxref=Genbank:WP_011258942.1;Name=WP_011258942.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347185.1;locus_tag=LNP58_RS21275;product=histidinol dehydrogenase;protein_id=WP_011258942.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4527336 4528250 . - . ID=gene-LNP58_RS21280;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LNP58_RS21280;old_locus_tag=LNP58_21240 NZ_CP086372.1 Protein Homology CDS 4527336 4528250 . - 0 ID=cds-WP_011258941.1;Parent=gene-LNP58_RS21280;Dbxref=Genbank:WP_011258941.1;Name=WP_011258941.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237692.1;locus_tag=LNP58_RS21280;product=ATP phosphoribosyltransferase;protein_id=WP_011258941.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4528260 4528586 . - . ID=gene-LNP58_RS21285;Name=LNP58_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21285;old_locus_tag=LNP58_21245 NZ_CP086372.1 Protein Homology CDS 4528260 4528586 . - 0 ID=cds-WP_011258940.1;Parent=gene-LNP58_RS21285;Dbxref=Genbank:WP_011258940.1;Name=WP_011258940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155319.1;locus_tag=LNP58_RS21285;product=YerC/YecD family TrpR-related protein;protein_id=WP_011258940.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4528900 4529698 . + . ID=gene-LNP58_RS21290;Name=LNP58_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21290;old_locus_tag=LNP58_21250 NZ_CP086372.1 Protein Homology CDS 4528900 4529171 . + 0 ID=cds-WP_094187798.1;Parent=gene-LNP58_RS21290;Dbxref=Genbank:WP_094187798.1;Name=WP_094187798.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS21290;product=IS5 family transposase;protein_id=WP_094187798.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4529170 4529698 . + 1 ID=cds-WP_094187798.1;Parent=gene-LNP58_RS21290;Dbxref=Genbank:WP_094187798.1;Name=WP_094187798.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS21290;product=IS5 family transposase;protein_id=WP_094187798.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4529714 4529790 . - . ID=gene-LNP58_RS21295;Name=LNP58_RS21295;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21295;old_locus_tag=LNP58_21255 NZ_CP086372.1 cmsearch ncRNA 4529714 4529790 . - . ID=rna-LNP58_RS21295;Parent=gene-LNP58_RS21295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21295;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4529714 4529790 . - . ID=exon-LNP58_RS21295-1;Parent=rna-LNP58_RS21295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21295;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4530204 4531616 . - . ID=gene-LNP58_RS21300;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LNP58_RS21300;old_locus_tag=LNP58_21260 NZ_CP086372.1 Protein Homology CDS 4530204 4531616 . - 0 ID=cds-WP_012444952.1;Parent=gene-LNP58_RS21300;Dbxref=Genbank:WP_012444952.1;Name=WP_012444952.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155320.1;locus_tag=LNP58_RS21300;product=histidine--tRNA ligase;protein_id=WP_012444952.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4531814 4532482 . + . ID=gene-LNP58_RS21305;Name=LNP58_RS21305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21305;old_locus_tag=LNP58_21265;pseudo=true NZ_CP086372.1 Protein Homology CDS 4531814 4532482 . + 0 ID=cds-LNP58_RS21305;Parent=gene-LNP58_RS21305;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159460.1;locus_tag=LNP58_RS21305;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4532881 4533624 . - . ID=gene-LNP58_RS21310;Name=LNP58_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21310;old_locus_tag=LNP58_21270 NZ_CP086372.1 Protein Homology CDS 4532881 4533624 . - 0 ID=cds-WP_041182115.1;Parent=gene-LNP58_RS21310;Dbxref=Genbank:WP_041182115.1;Name=WP_041182115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155322.1;locus_tag=LNP58_RS21310;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=WP_041182115.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4533727 4535031 . - . ID=gene-LNP58_RS21315;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LNP58_RS21315;old_locus_tag=LNP58_21275 NZ_CP086372.1 Protein Homology CDS 4533727 4535031 . - 0 ID=cds-WP_011258935.1;Parent=gene-LNP58_RS21315;Dbxref=Genbank:WP_011258935.1;Name=WP_011258935.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915357.1;locus_tag=LNP58_RS21315;product=threonine synthase;protein_id=WP_011258935.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4535193 4535507 . + . ID=gene-LNP58_RS21320;Name=LNP58_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21320;old_locus_tag=LNP58_21280 NZ_CP086372.1 Protein Homology CDS 4535193 4535507 . + 0 ID=cds-WP_024710669.1;Parent=gene-LNP58_RS21320;Dbxref=Genbank:WP_024710669.1;Name=WP_024710669.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155324.1;locus_tag=LNP58_RS21320;product=EthD family reductase;protein_id=WP_024710669.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4536231 4537885 . - . ID=gene-LNP58_RS21325;Name=LNP58_RS21325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21325;old_locus_tag=LNP58_21285;pseudo=true NZ_CP086372.1 Protein Homology CDS 4536231 4537885 . - 0 ID=cds-LNP58_RS21325;Parent=gene-LNP58_RS21325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155325.1;locus_tag=LNP58_RS21325;product=tannase/feruloyl esterase family alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4538443 4539411 . - . ID=gene-LNP58_RS21330;Name=LNP58_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21330;old_locus_tag=LNP58_21290 NZ_CP086372.1 Protein Homology CDS 4538443 4539411 . - 0 ID=cds-WP_075242188.1;Parent=gene-LNP58_RS21330;Dbxref=Genbank:WP_075242188.1;Name=WP_075242188.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258933.1;locus_tag=LNP58_RS21330;product=homoserine kinase;protein_id=WP_075242188.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4539408 4541915 . - . ID=gene-LNP58_RS21335;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LNP58_RS21335;old_locus_tag=LNP58_21295 NZ_CP086372.1 Protein Homology CDS 4539408 4541915 . - 0 ID=cds-WP_075242187.1;Parent=gene-LNP58_RS21335;Dbxref=Genbank:WP_075242187.1;Name=WP_075242187.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113111.1;locus_tag=LNP58_RS21335;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_075242187.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4542508 4542953 . - . ID=gene-LNP58_RS21340;Name=LNP58_RS21340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21340;old_locus_tag=LNP58_21300;pseudo=true NZ_CP086372.1 Protein Homology CDS 4542508 4542953 . - 0 ID=cds-LNP58_RS21340;Parent=gene-LNP58_RS21340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115243.1;locus_tag=LNP58_RS21340;product=tryptophan-rich sensory protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4543007 4543083 . - . ID=gene-LNP58_RS21345;Name=LNP58_RS21345;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS21345;old_locus_tag=LNP58_21305 NZ_CP086372.1 tRNAscan-SE tRNA 4543007 4543083 . - . ID=rna-LNP58_RS21345;Parent=gene-LNP58_RS21345;anticodon=(pos:complement(4543047..4543049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS21345;product=tRNA-Arg NZ_CP086372.1 tRNAscan-SE exon 4543007 4543083 . - . ID=exon-LNP58_RS21345-1;Parent=rna-LNP58_RS21345;anticodon=(pos:complement(4543047..4543049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS21345;product=tRNA-Arg NZ_CP086372.1 RefSeq gene 4543218 4544750 . + . ID=gene-LNP58_RS21350;Name=LNP58_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21350;old_locus_tag=LNP58_21310 NZ_CP086372.1 Protein Homology CDS 4543218 4544750 . + 0 ID=cds-WP_044756815.1;Parent=gene-LNP58_RS21350;Dbxref=Genbank:WP_044756815.1;Name=WP_044756815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507550.1;locus_tag=LNP58_RS21350;product=aldehyde dehydrogenase family protein;protein_id=WP_044756815.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4545339 4545623 . + . ID=gene-LNP58_RS21360;Name=LNP58_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21360;old_locus_tag=LNP58_21320 NZ_CP086372.1 Protein Homology CDS 4545339 4545623 . + 0 ID=cds-WP_011408481.1;Parent=gene-LNP58_RS21360;Dbxref=Genbank:WP_011408481.1;Name=WP_011408481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916283.1;locus_tag=LNP58_RS21360;product=DUF4190 domain-containing protein;protein_id=WP_011408481.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4545626 4546393 . + . ID=gene-LNP58_RS21365;Name=LNP58_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21365;old_locus_tag=LNP58_21325 NZ_CP086372.1 Protein Homology CDS 4545626 4546393 . + 0 ID=cds-WP_164994133.1;Parent=gene-LNP58_RS21365;Dbxref=Genbank:WP_164994133.1;Name=WP_164994133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472255.1;locus_tag=LNP58_RS21365;product=class I SAM-dependent methyltransferase;protein_id=WP_164994133.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4546399 4547454 . + . ID=gene-LNP58_RS21370;Name=LNP58_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21370;old_locus_tag=LNP58_21330 NZ_CP086372.1 Protein Homology CDS 4546399 4547454 . + 0 ID=cds-WP_075242186.1;Parent=gene-LNP58_RS21370;Dbxref=Genbank:WP_075242186.1;Name=WP_075242186.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090028.1;locus_tag=LNP58_RS21370;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_075242186.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4547451 4548503 . + . ID=gene-LNP58_RS21375;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LNP58_RS21375;old_locus_tag=LNP58_21335 NZ_CP086372.1 Protein Homology CDS 4547451 4548503 . + 0 ID=cds-WP_011408479.1;Parent=gene-LNP58_RS21375;Dbxref=Genbank:WP_011408479.1;Name=WP_011408479.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503151.1;locus_tag=LNP58_RS21375;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_011408479.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4548497 4549408 . + . ID=gene-LNP58_RS21380;Name=LNP58_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21380;old_locus_tag=LNP58_21340 NZ_CP086372.1 Protein Homology CDS 4548497 4549408 . + 0 ID=cds-WP_012444967.1;Parent=gene-LNP58_RS21380;Dbxref=Genbank:WP_012444967.1;Name=WP_012444967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813681.1;locus_tag=LNP58_RS21380;product=DMT family transporter;protein_id=WP_012444967.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4549547 4549721 . + . ID=gene-LNP58_RS21385;Name=LNP58_RS21385;end_range=4549721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21385;old_locus_tag=LNP58_21345;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4549547 4549721 . + 0 ID=cds-LNP58_RS21385;Parent=gene-LNP58_RS21385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4549721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851273.1;locus_tag=LNP58_RS21385;partial=true;product=aspartate/glutamate racemase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4550293 4551249 . - . ID=gene-LNP58_RS21390;Name=LNP58_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21390;old_locus_tag=LNP58_21350 NZ_CP086372.1 Protein Homology CDS 4550293 4551249 . - 0 ID=cds-WP_228329624.1;Parent=gene-LNP58_RS21390;Dbxref=Genbank:WP_228329624.1;Name=WP_228329624.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=LNP58_RS21390;product=IS30 family transposase;protein_id=WP_228329624.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4551397 4552575 . + . ID=gene-LNP58_RS21395;Name=LNP58_RS21395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21395;old_locus_tag=LNP58_21355;partial=true;pseudo=true;start_range=.,4551397 NZ_CP086372.1 Protein Homology CDS 4551397 4552575 . + 0 ID=cds-LNP58_RS21395;Parent=gene-LNP58_RS21395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300451.1;locus_tag=LNP58_RS21395;partial=true;product=MFS transporter;pseudo=true;start_range=.,4551397;transl_table=11 NZ_CP086372.1 RefSeq gene 4552579 4552654 . - . ID=gene-LNP58_RS21400;Name=LNP58_RS21400;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21400;old_locus_tag=LNP58_21360 NZ_CP086372.1 cmsearch ncRNA 4552579 4552654 . - . ID=rna-LNP58_RS21400;Parent=gene-LNP58_RS21400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21400;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4552579 4552654 . - . ID=exon-LNP58_RS21400-1;Parent=rna-LNP58_RS21400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21400;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4552716 4553447 . - . ID=gene-LNP58_RS21405;Name=LNP58_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21405;old_locus_tag=LNP58_21365 NZ_CP086372.1 Protein Homology CDS 4552716 4553447 . - 0 ID=cds-WP_069959842.1;Parent=gene-LNP58_RS21405;Dbxref=Genbank:WP_069959842.1;Name=WP_069959842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571247.1;locus_tag=LNP58_RS21405;product=phosphatase PAP2 family protein;protein_id=WP_069959842.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4553428 4554693 . - . ID=gene-LNP58_RS21410;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LNP58_RS21410;old_locus_tag=LNP58_21370 NZ_CP086372.1 Protein Homology CDS 4553428 4554693 . - 0 ID=cds-WP_011408474.1;Parent=gene-LNP58_RS21410;Dbxref=Genbank:WP_011408474.1;Name=WP_011408474.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300453.1;locus_tag=LNP58_RS21410;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_011408474.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4554814 4556040 . + . ID=gene-LNP58_RS21415;Name=LNP58_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21415;old_locus_tag=LNP58_21375 NZ_CP086372.1 Protein Homology CDS 4554814 4556040 . + 0 ID=cds-WP_011408473.1;Parent=gene-LNP58_RS21415;Dbxref=Genbank:WP_011408473.1;Name=WP_011408473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158053.1;locus_tag=LNP58_RS21415;product=ATP-binding protein;protein_id=WP_011408473.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4556037 4556603 . + . ID=gene-LNP58_RS21420;Name=LNP58_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21420;old_locus_tag=LNP58_21380 NZ_CP086372.1 Protein Homology CDS 4556037 4556603 . + 0 ID=cds-WP_011258919.1;Parent=gene-LNP58_RS21420;Dbxref=Genbank:WP_011258919.1;Name=WP_011258919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347151.1;locus_tag=LNP58_RS21420;product=response regulator transcription factor;protein_id=WP_011258919.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4556655 4557713 . - . ID=gene-LNP58_RS21425;Name=LNP58_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21425;old_locus_tag=LNP58_21385 NZ_CP086372.1 Protein Homology CDS 4556655 4557713 . - 0 ID=cds-WP_228329625.1;Parent=gene-LNP58_RS21425;Dbxref=Genbank:WP_228329625.1;Name=WP_228329625.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=LNP58_RS21425;product=IS630 family transposase;protein_id=WP_228329625.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4557844 4557920 . + . ID=gene-LNP58_RS21430;Name=LNP58_RS21430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21430;old_locus_tag=LNP58_21390 NZ_CP086372.1 cmsearch ncRNA 4557844 4557920 . + . ID=rna-LNP58_RS21430;Parent=gene-LNP58_RS21430;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21430;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4557844 4557920 . + . ID=exon-LNP58_RS21430-1;Parent=rna-LNP58_RS21430;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21430;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4557925 4560285 . - . ID=gene-LNP58_RS21435;Name=LNP58_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21435;old_locus_tag=LNP58_21395 NZ_CP086372.1 Protein Homology CDS 4557925 4560285 . - 0 ID=cds-WP_075239398.1;Parent=gene-LNP58_RS21435;Dbxref=Genbank:WP_075239398.1;Name=WP_075239398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090230.1;locus_tag=LNP58_RS21435;product=Tex family protein;protein_id=WP_075239398.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4560388 4560615 . - . ID=gene-LNP58_RS21440;Name=LNP58_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21440;old_locus_tag=LNP58_21400 NZ_CP086372.1 Protein Homology CDS 4560388 4560615 . - 0 ID=cds-WP_011408471.1;Parent=gene-LNP58_RS21440;Dbxref=Genbank:WP_011408471.1;Name=WP_011408471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157548.1;locus_tag=LNP58_RS21440;product=hypothetical protein;protein_id=WP_011408471.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4560805 4562016 . + . ID=gene-LNP58_RS21445;Name=LNP58_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21445;old_locus_tag=LNP58_21405 NZ_CP086372.1 Protein Homology CDS 4560805 4562016 . + 0 ID=cds-WP_011258915.1;Parent=gene-LNP58_RS21445;Dbxref=Genbank:WP_011258915.1;Name=WP_011258915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258915.1;locus_tag=LNP58_RS21445;product=FAD-dependent oxidoreductase;protein_id=WP_011258915.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4561974 4562405 . - . ID=gene-LNP58_RS21450;Name=LNP58_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21450;old_locus_tag=LNP58_21410 NZ_CP086372.1 Protein Homology CDS 4561974 4562405 . - 0 ID=cds-WP_228329757.1;Parent=gene-LNP58_RS21450;Dbxref=Genbank:WP_228329757.1;Name=WP_228329757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904408.1;locus_tag=LNP58_RS21450;product=hypothetical protein;protein_id=WP_228329757.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4562459 4562656 . - . ID=gene-LNP58_RS21455;Name=LNP58_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21455;old_locus_tag=LNP58_21415 NZ_CP086372.1 Protein Homology CDS 4562459 4562656 . - 0 ID=cds-WP_011258914.1;Parent=gene-LNP58_RS21455;Dbxref=Genbank:WP_011258914.1;Name=WP_011258914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482814.1;locus_tag=LNP58_RS21455;product=PspC domain-containing protein;protein_id=WP_011258914.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4562771 4563847 . - . ID=gene-LNP58_RS21460;Name=LNP58_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21460;old_locus_tag=LNP58_21420 NZ_CP086372.1 Protein Homology CDS 4562771 4563847 . - 0 ID=cds-WP_011258913.1;Parent=gene-LNP58_RS21460;Dbxref=Genbank:WP_011258913.1;Name=WP_011258913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301741.1;locus_tag=LNP58_RS21460;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC;protein_id=WP_011258913.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4563844 4565070 . - . ID=gene-LNP58_RS21465;Name=phaE;gbkey=Gene;gene=phaE;gene_biotype=protein_coding;locus_tag=LNP58_RS21465;old_locus_tag=LNP58_21425 NZ_CP086372.1 Protein Homology CDS 4563844 4565070 . - 0 ID=cds-WP_012444981.1;Parent=gene-LNP58_RS21465;Dbxref=Genbank:WP_012444981.1;Name=WP_012444981.1;gbkey=CDS;gene=phaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463162.1;locus_tag=LNP58_RS21465;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE;protein_id=WP_012444981.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4565126 4565788 . - . ID=gene-LNP58_RS21470;Name=LNP58_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21470;old_locus_tag=LNP58_21430 NZ_CP086372.1 Protein Homology CDS 4565126 4565788 . - 0 ID=cds-WP_178380571.1;Parent=gene-LNP58_RS21470;Dbxref=Genbank:WP_178380571.1;Name=WP_178380571.1;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172041.1;locus_tag=LNP58_RS21470;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_178380571.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4565873 4566631 . + . ID=gene-LNP58_RS21475;Name=LNP58_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21475;old_locus_tag=LNP58_21435 NZ_CP086372.1 Protein Homology CDS 4565873 4566631 . + 0 ID=cds-WP_011258910.1;Parent=gene-LNP58_RS21475;Dbxref=Genbank:WP_011258910.1;Name=WP_011258910.1;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157555.1;locus_tag=LNP58_RS21475;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_011258910.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4566942 4567106 . + . ID=gene-LNP58_RS21480;Name=LNP58_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21480;old_locus_tag=LNP58_21440 NZ_CP086372.1 GeneMarkS-2+ CDS 4566942 4567106 . + 0 ID=cds-WP_011258909.1;Parent=gene-LNP58_RS21480;Dbxref=Genbank:WP_011258909.1;Name=WP_011258909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21480;product=hypothetical protein;protein_id=WP_011258909.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4567173 4568492 . - . ID=gene-LNP58_RS21485;Name=LNP58_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21485;old_locus_tag=LNP58_21445 NZ_CP086372.1 Protein Homology CDS 4567173 4568492 . - 0 ID=cds-WP_109181940.1;Parent=gene-LNP58_RS21485;Dbxref=Genbank:WP_109181940.1;Name=WP_109181940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS21485;product=IS701-like element ISXo15 family transposase;protein_id=WP_109181940.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4568573 4568980 . - . ID=gene-LNP58_RS21490;Name=LNP58_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21490;old_locus_tag=LNP58_21450 NZ_CP086372.1 Protein Homology CDS 4568573 4568980 . - 0 ID=cds-WP_069959840.1;Parent=gene-LNP58_RS21490;Dbxref=Genbank:WP_069959840.1;Name=WP_069959840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372294.1;locus_tag=LNP58_RS21490;product=hypothetical protein;protein_id=WP_069959840.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4569101 4569292 . - . ID=gene-LNP58_RS21495;Name=LNP58_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21495;old_locus_tag=LNP58_21455 NZ_CP086372.1 GeneMarkS-2+ CDS 4569101 4569292 . - 0 ID=cds-WP_075240038.1;Parent=gene-LNP58_RS21495;Dbxref=Genbank:WP_075240038.1;Name=WP_075240038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21495;product=hypothetical protein;protein_id=WP_075240038.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4569407 4569542 . + . ID=gene-LNP58_RS21500;Name=LNP58_RS21500;end_range=4569542,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21500;old_locus_tag=LNP58_21460;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4569407 4569542 . + 0 ID=cds-LNP58_RS21500;Parent=gene-LNP58_RS21500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4569542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=LNP58_RS21500;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4569689 4570177 . - . ID=gene-LNP58_RS21505;Name=LNP58_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21505;old_locus_tag=LNP58_21465 NZ_CP086372.1 Protein Homology CDS 4569689 4570177 . - 0 ID=cds-WP_011408466.1;Parent=gene-LNP58_RS21505;Dbxref=Genbank:WP_011408466.1;Name=WP_011408466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444982.1;locus_tag=LNP58_RS21505;product=8-oxo-dGTP diphosphatase;protein_id=WP_011408466.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4570262 4570771 . - . ID=gene-LNP58_RS21510;Name=LNP58_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21510;old_locus_tag=LNP58_21470 NZ_CP086372.1 Protein Homology CDS 4570262 4570771 . - 0 ID=cds-WP_011258907.1;Parent=gene-LNP58_RS21510;Dbxref=Genbank:WP_011258907.1;Name=WP_011258907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157557.1;locus_tag=LNP58_RS21510;product=DUF1249 domain-containing protein;protein_id=WP_011258907.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4570977 4571798 . - . ID=gene-LNP58_RS21515;Name=LNP58_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21515;old_locus_tag=LNP58_21475 NZ_CP086372.1 Protein Homology CDS 4570977 4571798 . - 0 ID=cds-WP_011408465.1;Parent=gene-LNP58_RS21515;Dbxref=Genbank:WP_011408465.1;Name=WP_011408465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037311.1;locus_tag=LNP58_RS21515;product=kinase/pyrophosphorylase;protein_id=WP_011408465.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4571940 4574333 . + . ID=gene-LNP58_RS21520;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LNP58_RS21520;old_locus_tag=LNP58_21480 NZ_CP086372.1 Protein Homology CDS 4571940 4574333 . + 0 ID=cds-WP_011258905.1;Parent=gene-LNP58_RS21520;Dbxref=Genbank:WP_011258905.1;Name=WP_011258905.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118687.1;locus_tag=LNP58_RS21520;product=phosphoenolpyruvate synthase;protein_id=WP_011258905.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4574333 4575319 . + . ID=gene-LNP58_RS21525;Name=LNP58_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21525;old_locus_tag=LNP58_21485 NZ_CP086372.1 Protein Homology CDS 4574333 4575319 . + 0 ID=cds-WP_011258904.1;Parent=gene-LNP58_RS21525;Dbxref=Genbank:WP_011258904.1;Name=WP_011258904.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157560.1;locus_tag=LNP58_RS21525;product=mechanosensitive ion channel;protein_id=WP_011258904.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4575531 4576115 . - . ID=gene-LNP58_RS21530;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LNP58_RS21530;old_locus_tag=LNP58_21490 NZ_CP086372.1 Protein Homology CDS 4575531 4576115 . - 0 ID=cds-WP_011258903.1;Parent=gene-LNP58_RS21530;Dbxref=Genbank:WP_011258903.1;Name=WP_011258903.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373214.1;locus_tag=LNP58_RS21530;product=oligoribonuclease;protein_id=WP_011258903.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4576188 4576700 . - . ID=gene-LNP58_RS21535;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LNP58_RS21535;old_locus_tag=LNP58_21495 NZ_CP086372.1 Protein Homology CDS 4576188 4576700 . - 0 ID=cds-WP_011258902.1;Parent=gene-LNP58_RS21535;Dbxref=Genbank:WP_011258902.1;Name=WP_011258902.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577150.1;locus_tag=LNP58_RS21535;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_011258902.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4576697 4577164 . - . ID=gene-LNP58_RS21540;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LNP58_RS21540;old_locus_tag=LNP58_21500 NZ_CP086372.1 Protein Homology CDS 4576697 4577164 . - 0 ID=cds-WP_011258901.1;Parent=gene-LNP58_RS21540;Dbxref=Genbank:WP_011258901.1;Name=WP_011258901.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157563.1;locus_tag=LNP58_RS21540;product=manganese-binding transcriptional regulator MntR;protein_id=WP_011258901.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4577308 4578642 . + . ID=gene-LNP58_RS21545;Name=LNP58_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21545;old_locus_tag=LNP58_21505 NZ_CP086372.1 Protein Homology CDS 4577308 4578642 . + 0 ID=cds-WP_011408462.1;Parent=gene-LNP58_RS21545;Dbxref=Genbank:WP_011408462.1;Name=WP_011408462.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051299.1;locus_tag=LNP58_RS21545;product=Nramp family divalent metal transporter;protein_id=WP_011408462.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4579205 4579405 . + . ID=gene-LNP58_RS21550;Name=LNP58_RS21550;end_range=4579405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21550;old_locus_tag=LNP58_21510;partial=true;pseudo=true;start_range=.,4579205 NZ_CP086372.1 Protein Homology CDS 4579205 4579405 . + 0 ID=cds-LNP58_RS21550;Parent=gene-LNP58_RS21550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4579405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922658.1;locus_tag=LNP58_RS21550;partial=true;product=response regulator transcription factor;pseudo=true;start_range=.,4579205;transl_table=11 NZ_CP086372.1 RefSeq gene 4579676 4580830 . + . ID=gene-LNP58_RS21555;Name=LNP58_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21555;old_locus_tag=LNP58_21515 NZ_CP086372.1 Protein Homology CDS 4579676 4580830 . + 0 ID=cds-WP_027703561.1;Parent=gene-LNP58_RS21555;Dbxref=Genbank:WP_027703561.1;Name=WP_027703561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347407.1;locus_tag=LNP58_RS21555;product=Cache 3/Cache 2 fusion domain-containing protein;protein_id=WP_027703561.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4580873 4581478 . + . ID=gene-LNP58_RS21560;Name=LNP58_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21560;old_locus_tag=LNP58_21520 NZ_CP086372.1 Protein Homology CDS 4580873 4581478 . + 0 ID=cds-WP_069959839.1;Parent=gene-LNP58_RS21560;Dbxref=Genbank:WP_069959839.1;Name=WP_069959839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157575.1;locus_tag=LNP58_RS21560;product=hypothetical protein;protein_id=WP_069959839.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4581674 4582597 . - . ID=gene-LNP58_RS21565;Name=LNP58_RS21565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21565;old_locus_tag=LNP58_21525;pseudo=true NZ_CP086372.1 Protein Homology CDS 4581674 4582597 . - 0 ID=cds-LNP58_RS21565;Parent=gene-LNP58_RS21565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408458.1;locus_tag=LNP58_RS21565;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4582743 4583810 . + . ID=gene-LNP58_RS21570;Name=LNP58_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21570;old_locus_tag=LNP58_21530 NZ_CP086372.1 Protein Homology CDS 4582743 4583810 . + 0 ID=cds-WP_228329758.1;Parent=gene-LNP58_RS21570;Dbxref=Genbank:WP_228329758.1;Name=WP_228329758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300120.1;locus_tag=LNP58_RS21570;product=YeiH family protein;protein_id=WP_228329758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4583838 4584113 . - . ID=gene-LNP58_RS21575;Name=LNP58_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21575;old_locus_tag=LNP58_21535 NZ_CP086372.1 Protein Homology CDS 4583838 4584113 . - 0 ID=cds-WP_052285790.1;Parent=gene-LNP58_RS21575;Dbxref=Genbank:WP_052285790.1;Name=WP_052285790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037472.2;locus_tag=LNP58_RS21575;product=Rap1a/Tai family immunity protein;protein_id=WP_052285790.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4584338 4584589 . - . ID=gene-LNP58_RS21580;Name=LNP58_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21580;old_locus_tag=LNP58_21540 NZ_CP086372.1 Protein Homology CDS 4584338 4584589 . - 0 ID=cds-WP_229001915.1;Parent=gene-LNP58_RS21580;Dbxref=Genbank:WP_229001915.1;Name=WP_229001915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LNP58_RS21580;product=SDR family oxidoreductase;protein_id=WP_229001915.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4584643 4584722 . - . ID=gene-LNP58_RS21585;Name=LNP58_RS21585;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21585;old_locus_tag=LNP58_21545 NZ_CP086372.1 cmsearch ncRNA 4584643 4584722 . - . ID=rna-LNP58_RS21585;Parent=gene-LNP58_RS21585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21585;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4584643 4584722 . - . ID=exon-LNP58_RS21585-1;Parent=rna-LNP58_RS21585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21585;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4584706 4584780 . + . ID=gene-LNP58_RS21590;Name=LNP58_RS21590;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21590;old_locus_tag=LNP58_21550 NZ_CP086372.1 cmsearch ncRNA 4584706 4584780 . + . ID=rna-LNP58_RS21590;Parent=gene-LNP58_RS21590;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21590;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4584706 4584780 . + . ID=exon-LNP58_RS21590-1;Parent=rna-LNP58_RS21590;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21590;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4584826 4585716 . - . ID=gene-LNP58_RS21595;Name=LNP58_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21595;old_locus_tag=LNP58_21555 NZ_CP086372.1 Protein Homology CDS 4584826 4585716 . - 0 ID=cds-WP_011408454.1;Parent=gene-LNP58_RS21595;Dbxref=Genbank:WP_011408454.1;Name=WP_011408454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373162.1;locus_tag=LNP58_RS21595;product=LysR family transcriptional regulator;protein_id=WP_011408454.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4585826 4587397 . + . ID=gene-LNP58_RS21600;Name=LNP58_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21600;old_locus_tag=LNP58_21560 NZ_CP086372.1 Protein Homology CDS 4585826 4587397 . + 0 ID=cds-WP_011258892.1;Parent=gene-LNP58_RS21600;Dbxref=Genbank:WP_011258892.1;Name=WP_011258892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160334.1;locus_tag=LNP58_RS21600;product=proton-conducting transporter membrane subunit;protein_id=WP_011258892.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4587420 4589858 . + . ID=gene-LNP58_RS21605;Name=LNP58_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21605;old_locus_tag=LNP58_21565 NZ_CP086372.1 Protein Homology CDS 4587420 4589858 . + 0 ID=cds-WP_011408453.1;Parent=gene-LNP58_RS21605;Dbxref=Genbank:WP_011408453.1;Name=WP_011408453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182108.1;locus_tag=LNP58_RS21605;product=DUF2309 domain-containing protein;protein_id=WP_011408453.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4590003 4591568 . - . ID=gene-LNP58_RS21610;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LNP58_RS21610;old_locus_tag=LNP58_21570 NZ_CP086372.1 Protein Homology CDS 4590003 4591568 . - 0 ID=cds-WP_027703558.1;Parent=gene-LNP58_RS21610;Dbxref=Genbank:WP_027703558.1;Name=WP_027703558.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=LNP58_RS21610;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_027703558.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4591695 4593152 . - . ID=gene-LNP58_RS21615;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LNP58_RS21615;old_locus_tag=LNP58_21575 NZ_CP086372.1 Protein Homology CDS 4591695 4593152 . - 0 ID=cds-WP_011258889.1;Parent=gene-LNP58_RS21615;Dbxref=Genbank:WP_011258889.1;Name=WP_011258889.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004657166.1;locus_tag=LNP58_RS21615;product=IMP dehydrogenase;protein_id=WP_011258889.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4593341 4594252 . - . ID=gene-LNP58_RS21620;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LNP58_RS21620;old_locus_tag=LNP58_21580 NZ_CP086372.1 Protein Homology CDS 4593341 4594252 . - 0 ID=cds-WP_011258888.1;Parent=gene-LNP58_RS21620;Dbxref=Genbank:WP_011258888.1;Name=WP_011258888.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157588.1;locus_tag=LNP58_RS21620;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_011258888.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4594302 4594622 . + . ID=gene-LNP58_RS21625;Name=LNP58_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21625;old_locus_tag=LNP58_21585 NZ_CP086372.1 Protein Homology CDS 4594302 4594622 . + 0 ID=cds-WP_011258887.1;Parent=gene-LNP58_RS21625;Dbxref=Genbank:WP_011258887.1;Name=WP_011258887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258887.1;locus_tag=LNP58_RS21625;product=DUF1244 domain-containing protein;protein_id=WP_011258887.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4594915 4596290 . + . ID=gene-LNP58_RS21630;Name=LNP58_RS21630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21630;old_locus_tag=LNP58_21590;pseudo=true NZ_CP086372.1 Protein Homology CDS 4594915 4596290 . + 0 ID=cds-LNP58_RS21630;Parent=gene-LNP58_RS21630;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=LNP58_RS21630;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4596469 4598289 . - . ID=gene-LNP58_RS21635;Name=LNP58_RS21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21635;old_locus_tag=LNP58_21595;pseudo=true NZ_CP086372.1 Protein Homology CDS 4596469 4598289 . - 0 ID=cds-LNP58_RS21635;Parent=gene-LNP58_RS21635;Note=frameshifted;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489640.1;locus_tag=LNP58_RS21635;product=monovalent cation:proton antiporter-2 (CPA2) family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4598462 4599355 . - . ID=gene-LNP58_RS21640;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LNP58_RS21640;old_locus_tag=LNP58_21600 NZ_CP086372.1 Protein Homology CDS 4598462 4599355 . - 0 ID=cds-WP_011258884.1;Parent=gene-LNP58_RS21640;Dbxref=Genbank:WP_011258884.1;Name=WP_011258884.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157591.1;locus_tag=LNP58_RS21640;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011258884.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4599355 4601262 . - . ID=gene-LNP58_RS21645;Name=LNP58_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21645;old_locus_tag=LNP58_21605 NZ_CP086372.1 Protein Homology CDS 4599355 4601262 . - 0 ID=cds-WP_011258883.1;Parent=gene-LNP58_RS21645;Dbxref=Genbank:WP_011258883.1;Name=WP_011258883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300130.1;locus_tag=LNP58_RS21645;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_011258883.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4601276 4602244 . - . ID=gene-LNP58_RS21650;Name=LNP58_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21650;old_locus_tag=LNP58_21610 NZ_CP086372.1 Protein Homology CDS 4601276 4602244 . - 0 ID=cds-WP_011408448.1;Parent=gene-LNP58_RS21650;Dbxref=Genbank:WP_011408448.1;Name=WP_011408448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572384.1;locus_tag=LNP58_RS21650;product=glycosyltransferase family 4 protein;protein_id=WP_011408448.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4602244 4603422 . - . ID=gene-LNP58_RS21655;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LNP58_RS21655;old_locus_tag=LNP58_21615 NZ_CP086372.1 Protein Homology CDS 4602244 4603422 . - 0 ID=cds-WP_011258881.1;Parent=gene-LNP58_RS21655;Dbxref=Genbank:WP_011258881.1;Name=WP_011258881.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468665.1;locus_tag=LNP58_RS21655;product=lipopolysaccharide assembly protein LapB;protein_id=WP_011258881.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4603429 4603734 . - . ID=gene-LNP58_RS21660;Name=LNP58_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21660;old_locus_tag=LNP58_21620 NZ_CP086372.1 Protein Homology CDS 4603429 4603734 . - 0 ID=cds-WP_011258880.1;Parent=gene-LNP58_RS21660;Dbxref=Genbank:WP_011258880.1;Name=WP_011258880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451180.1;locus_tag=LNP58_RS21660;product=LapA family protein;protein_id=WP_011258880.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4603802 4604113 . - . ID=gene-LNP58_RS21665;Name=LNP58_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21665;old_locus_tag=LNP58_21625 NZ_CP086372.1 Protein Homology CDS 4603802 4604113 . - 0 ID=cds-WP_011408447.1;Parent=gene-LNP58_RS21665;Dbxref=Genbank:WP_011408447.1;Name=WP_011408447.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408447.1;locus_tag=LNP58_RS21665;product=integration host factor subunit beta;protein_id=WP_011408447.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4604202 4605887 . - . ID=gene-LNP58_RS21670;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LNP58_RS21670;old_locus_tag=LNP58_21630 NZ_CP086372.1 Protein Homology CDS 4604202 4605887 . - 0 ID=cds-WP_011258878.1;Parent=gene-LNP58_RS21670;Dbxref=Genbank:WP_011258878.1;Name=WP_011258878.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183099.1;locus_tag=LNP58_RS21670;product=30S ribosomal protein S1;protein_id=WP_011258878.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4606071 4606754 . - . ID=gene-LNP58_RS21675;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LNP58_RS21675;old_locus_tag=LNP58_21635 NZ_CP086372.1 Protein Homology CDS 4606071 4606754 . - 0 ID=cds-WP_011258877.1;Parent=gene-LNP58_RS21675;Dbxref=Genbank:WP_011258877.1;Name=WP_011258877.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258877.1;locus_tag=LNP58_RS21675;product=(d)CMP kinase;protein_id=WP_011258877.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4606927 4607052 . + . ID=gene-LNP58_RS21680;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LNP58_RS21680;old_locus_tag=LNP58_21640 NZ_CP086372.1 Protein Homology CDS 4606927 4607052 . + 0 ID=cds-WP_005913193.1;Parent=gene-LNP58_RS21680;Dbxref=Genbank:WP_005913193.1;Name=WP_005913193.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=LNP58_RS21680;product=type B 50S ribosomal protein L36;protein_id=WP_005913193.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4607319 4607660 . + . ID=gene-LNP58_RS21685;Name=LNP58_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21685;old_locus_tag=LNP58_21645 NZ_CP086372.1 Protein Homology CDS 4607319 4607660 . + 0 ID=cds-WP_011258876.1;Parent=gene-LNP58_RS21685;Dbxref=Genbank:WP_011258876.1;Name=WP_011258876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489654.1;locus_tag=LNP58_RS21685;product=hypothetical protein;protein_id=WP_011258876.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4607897 4608931 . + . ID=gene-LNP58_RS21690;Name=LNP58_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21690;old_locus_tag=LNP58_21650 NZ_CP086372.1 Protein Homology CDS 4607897 4608931 . + 0 ID=cds-WP_011408446.1;Parent=gene-LNP58_RS21690;Dbxref=Genbank:WP_011408446.1;Name=WP_011408446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372979.1;locus_tag=LNP58_RS21690;product=agmatine deiminase family protein;protein_id=WP_011408446.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4608993 4609069 . + . ID=gene-LNP58_RS21695;Name=LNP58_RS21695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21695;old_locus_tag=LNP58_21655 NZ_CP086372.1 cmsearch ncRNA 4608993 4609069 . + . ID=rna-LNP58_RS21695;Parent=gene-LNP58_RS21695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21695;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4608993 4609069 . + . ID=exon-LNP58_RS21695-1;Parent=rna-LNP58_RS21695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21695;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4609201 4610085 . + . ID=gene-LNP58_RS21700;Name=LNP58_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21700;old_locus_tag=LNP58_21660 NZ_CP086372.1 Protein Homology CDS 4609201 4610085 . + 0 ID=cds-WP_011408445.1;Parent=gene-LNP58_RS21700;Dbxref=Genbank:WP_011408445.1;Name=WP_011408445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451810.1;locus_tag=LNP58_RS21700;product=carbon-nitrogen hydrolase;protein_id=WP_011408445.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4610090 4610629 . + . ID=gene-LNP58_RS21705;Name=LNP58_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21705;old_locus_tag=LNP58_21665 NZ_CP086372.1 Protein Homology CDS 4610090 4610629 . + 0 ID=cds-WP_011258873.1;Parent=gene-LNP58_RS21705;Dbxref=Genbank:WP_011258873.1;Name=WP_011258873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925487.1;locus_tag=LNP58_RS21705;product=GNAT family N-acetyltransferase;protein_id=WP_011258873.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4610622 4611842 . + . ID=gene-LNP58_RS21710;Name=LNP58_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21710;old_locus_tag=LNP58_21670 NZ_CP086372.1 Protein Homology CDS 4610622 4611842 . + 0 ID=cds-WP_011408444.1;Parent=gene-LNP58_RS21710;Dbxref=Genbank:WP_011408444.1;Name=WP_011408444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237613.1;locus_tag=LNP58_RS21710;product=TraB/GumN family protein;protein_id=WP_011408444.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4611863 4612234 . - . ID=gene-LNP58_RS21715;Name=LNP58_RS21715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21715;old_locus_tag=LNP58_21675;partial=true;pseudo=true;start_range=.,4611863 NZ_CP086372.1 Protein Homology CDS 4611863 4612234 . - 0 ID=cds-LNP58_RS21715;Parent=gene-LNP58_RS21715;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849191.1;locus_tag=LNP58_RS21715;partial=true;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;start_range=.,4611863;transl_table=11 NZ_CP086372.1 RefSeq gene 4612306 4615440 . - . ID=gene-LNP58_RS21720;Name=LNP58_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21720;old_locus_tag=LNP58_21680 NZ_CP086372.1 Protein Homology CDS 4612306 4615440 . - 0 ID=cds-WP_012445001.1;Parent=gene-LNP58_RS21720;Dbxref=Genbank:WP_012445001.1;Name=WP_012445001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163390.1;locus_tag=LNP58_RS21720;product=discoidin domain-containing protein;protein_id=WP_012445001.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4615467 4616303 . - . ID=gene-LNP58_RS21725;Name=LNP58_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21725;old_locus_tag=LNP58_21685 NZ_CP086372.1 Protein Homology CDS 4615467 4616303 . - 0 ID=cds-WP_069959834.1;Parent=gene-LNP58_RS21725;Dbxref=Genbank:WP_069959834.1;Name=WP_069959834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357393.1;locus_tag=LNP58_RS21725;product=carbohydrate ABC transporter permease;protein_id=WP_069959834.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4616300 4617184 . - . ID=gene-LNP58_RS21730;Name=LNP58_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21730;old_locus_tag=LNP58_21690 NZ_CP086372.1 Protein Homology CDS 4616300 4617184 . - 0 ID=cds-WP_011258869.1;Parent=gene-LNP58_RS21730;Dbxref=Genbank:WP_011258869.1;Name=WP_011258869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157814.1;locus_tag=LNP58_RS21730;product=sugar ABC transporter permease;protein_id=WP_011258869.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4617181 4618551 . - . ID=gene-LNP58_RS21735;Name=LNP58_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21735;old_locus_tag=LNP58_21695 NZ_CP086372.1 Protein Homology CDS 4617181 4618551 . - 0 ID=cds-WP_011258868.1;Parent=gene-LNP58_RS21735;Dbxref=Genbank:WP_011258868.1;Name=WP_011258868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157813.1;locus_tag=LNP58_RS21735;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011258868.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4618555 4620174 . - . ID=gene-LNP58_RS21740;Name=LNP58_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21740;old_locus_tag=LNP58_21700 NZ_CP086372.1 Protein Homology CDS 4618555 4620174 . - 0 ID=cds-WP_069959833.1;Parent=gene-LNP58_RS21740;Dbxref=Genbank:WP_069959833.1;Name=WP_069959833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258867.1;locus_tag=LNP58_RS21740;product=hypothetical protein;protein_id=WP_069959833.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4620277 4623018 . - . ID=gene-LNP58_RS21745;Name=LNP58_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21745;old_locus_tag=LNP58_21705 NZ_CP086372.1 Protein Homology CDS 4620277 4623018 . - 0 ID=cds-WP_011408439.1;Parent=gene-LNP58_RS21745;Dbxref=Genbank:WP_011408439.1;Name=WP_011408439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172742.1;locus_tag=LNP58_RS21745;product=TonB-dependent receptor;protein_id=WP_011408439.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4623141 4624163 . - . ID=gene-LNP58_RS21750;Name=LNP58_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21750;old_locus_tag=LNP58_21710 NZ_CP086372.1 Protein Homology CDS 4623141 4624163 . - 0 ID=cds-WP_011408438.1;Parent=gene-LNP58_RS21750;Dbxref=Genbank:WP_011408438.1;Name=WP_011408438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115157.1;locus_tag=LNP58_RS21750;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011408438.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4624732 4625052 . - . ID=gene-LNP58_RS21755;Name=LNP58_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21755;old_locus_tag=LNP58_21715 NZ_CP086372.1 Protein Homology CDS 4624732 4625052 . - 0 ID=cds-WP_011408437.1;Parent=gene-LNP58_RS21755;Dbxref=Genbank:WP_011408437.1;Name=WP_011408437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904540.1;locus_tag=LNP58_RS21755;product=BolA family transcriptional regulator;protein_id=WP_011408437.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4625049 4625348 . - . ID=gene-LNP58_RS21760;Name=LNP58_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21760;old_locus_tag=LNP58_21720 NZ_CP086372.1 Protein Homology CDS 4625049 4625348 . - 0 ID=cds-WP_011408436.1;Parent=gene-LNP58_RS21760;Dbxref=Genbank:WP_011408436.1;Name=WP_011408436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503597.1;locus_tag=LNP58_RS21760;product=YciI family protein;protein_id=WP_011408436.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4625577 4626605 . + . ID=gene-LNP58_RS21765;Name=LNP58_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21765;old_locus_tag=LNP58_21725 NZ_CP086372.1 Protein Homology CDS 4625577 4626605 . + 0 ID=cds-WP_024710371.1;Parent=gene-LNP58_RS21765;Dbxref=Genbank:WP_024710371.1;Name=WP_024710371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304898.1;locus_tag=LNP58_RS21765;product=ScpA family protein;protein_id=WP_024710371.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4626619 4627818 . + . ID=gene-LNP58_RS21770;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LNP58_RS21770;old_locus_tag=LNP58_21730 NZ_CP086372.1 Protein Homology CDS 4626619 4627818 . + 0 ID=cds-WP_012445010.1;Parent=gene-LNP58_RS21770;Dbxref=Genbank:WP_012445010.1;Name=WP_012445010.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382202.1;locus_tag=LNP58_RS21770;product=SMC-Scp complex subunit ScpB;protein_id=WP_012445010.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4627811 4629451 . + . ID=gene-LNP58_RS21775;Name=LNP58_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21775;old_locus_tag=LNP58_21735 NZ_CP086372.1 Protein Homology CDS 4627811 4629451 . + 0 ID=cds-WP_011408433.1;Parent=gene-LNP58_RS21775;Dbxref=Genbank:WP_011408433.1;Name=WP_011408433.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163786.1;locus_tag=LNP58_RS21775;product=pseudouridine synthase;protein_id=WP_011408433.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4629661 4630098 . - . ID=gene-LNP58_RS21780;Name=LNP58_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21780;old_locus_tag=LNP58_21740 NZ_CP086372.1 Protein Homology CDS 4629661 4630098 . - 0 ID=cds-WP_011258859.1;Parent=gene-LNP58_RS21780;Dbxref=Genbank:WP_011258859.1;Name=WP_011258859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158703.1;locus_tag=LNP58_RS21780;product=hypothetical protein;protein_id=WP_011258859.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4630214 4631032 . + . ID=gene-LNP58_RS21785;Name=LNP58_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21785;old_locus_tag=LNP58_21745 NZ_CP086372.1 Protein Homology CDS 4630214 4631032 . + 0 ID=cds-WP_011258858.1;Parent=gene-LNP58_RS21785;Dbxref=Genbank:WP_011258858.1;Name=WP_011258858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157804.1;locus_tag=LNP58_RS21785;product=glutaminyl-peptide cyclotransferase;protein_id=WP_011258858.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4631195 4632160 . + . ID=gene-LNP58_RS21790;Name=LNP58_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21790;old_locus_tag=LNP58_21750 NZ_CP086372.1 Protein Homology CDS 4631195 4632160 . + 0 ID=cds-WP_109181928.1-5;Parent=gene-LNP58_RS21790;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS21790;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4632181 4632984 . - . ID=gene-LNP58_RS21795;Name=LNP58_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21795;old_locus_tag=LNP58_21755 NZ_CP086372.1 Protein Homology CDS 4632181 4632984 . - 0 ID=cds-WP_011408430.1;Parent=gene-LNP58_RS21795;Dbxref=Genbank:WP_011408430.1;Name=WP_011408430.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300016.1;locus_tag=LNP58_RS21795;product=amidohydrolase;protein_id=WP_011408430.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4633124 4634272 . - . ID=gene-LNP58_RS21800;Name=LNP58_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21800;old_locus_tag=LNP58_21760 NZ_CP086372.1 Protein Homology CDS 4633124 4634272 . - 0 ID=cds-WP_011408429.1;Parent=gene-LNP58_RS21800;Dbxref=Genbank:WP_011408429.1;Name=WP_011408429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964632.1;locus_tag=LNP58_RS21800;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011408429.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4634499 4635143 . + . ID=gene-LNP58_RS21805;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=LNP58_RS21805;old_locus_tag=LNP58_21765 NZ_CP086372.1 Protein Homology CDS 4634499 4635143 . + 0 ID=cds-WP_011408428.1;Parent=gene-LNP58_RS21805;Dbxref=Genbank:WP_011408428.1;Name=WP_011408428.1;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971018.1;locus_tag=LNP58_RS21805;product=heme ABC exporter ATP-binding protein CcmA;protein_id=WP_011408428.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4635140 4635835 . + . ID=gene-LNP58_RS21810;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=LNP58_RS21810;old_locus_tag=LNP58_21770 NZ_CP086372.1 Protein Homology CDS 4635140 4635835 . + 0 ID=cds-WP_011258853.1;Parent=gene-LNP58_RS21810;Dbxref=Genbank:WP_011258853.1;Name=WP_011258853.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808060.1;locus_tag=LNP58_RS21810;product=heme exporter protein CcmB;protein_id=WP_011258853.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4635930 4636682 . + . ID=gene-LNP58_RS21815;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=LNP58_RS21815;old_locus_tag=LNP58_21775 NZ_CP086372.1 Protein Homology CDS 4635930 4636682 . + 0 ID=cds-WP_011408427.1;Parent=gene-LNP58_RS21815;Dbxref=Genbank:WP_011408427.1;Name=WP_011408427.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171667.1;locus_tag=LNP58_RS21815;product=heme ABC transporter permease CcmC;protein_id=WP_011408427.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4636679 4636849 . + . ID=gene-LNP58_RS21820;Name=LNP58_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21820;old_locus_tag=LNP58_21780 NZ_CP086372.1 Protein Homology CDS 4636679 4636849 . + 0 ID=cds-WP_011258852.1;Parent=gene-LNP58_RS21820;Dbxref=Genbank:WP_011258852.1;Name=WP_011258852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913150.1;locus_tag=LNP58_RS21820;product=heme exporter protein CcmD;protein_id=WP_011258852.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4636846 4637316 . + . ID=gene-LNP58_RS21825;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LNP58_RS21825;old_locus_tag=LNP58_21785 NZ_CP086372.1 Protein Homology CDS 4636846 4637316 . + 0 ID=cds-WP_011258851.1;Parent=gene-LNP58_RS21825;Dbxref=Genbank:WP_011258851.1;Name=WP_011258851.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503607.1;locus_tag=LNP58_RS21825;product=cytochrome c maturation protein CcmE;protein_id=WP_011258851.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4637485 4639422 . + . ID=gene-LNP58_RS21830;Name=LNP58_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21830;old_locus_tag=LNP58_21790 NZ_CP086372.1 Protein Homology CDS 4637485 4639422 . + 0 ID=cds-WP_011408426.1;Parent=gene-LNP58_RS21830;Dbxref=Genbank:WP_011408426.1;Name=WP_011408426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171666.1;locus_tag=LNP58_RS21830;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_011408426.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4639415 4640017 . + . ID=gene-LNP58_RS21835;Name=LNP58_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21835;old_locus_tag=LNP58_21795 NZ_CP086372.1 Protein Homology CDS 4639415 4640017 . + 0 ID=cds-WP_011258849.1;Parent=gene-LNP58_RS21835;Dbxref=Genbank:WP_011258849.1;Name=WP_011258849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157799.1;locus_tag=LNP58_RS21835;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_011258849.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4640014 4640445 . + . ID=gene-LNP58_RS21840;Name=LNP58_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21840;old_locus_tag=LNP58_21800 NZ_CP086372.1 Protein Homology CDS 4640014 4640445 . + 0 ID=cds-WP_011258848.1;Parent=gene-LNP58_RS21840;Dbxref=Genbank:WP_011258848.1;Name=WP_011258848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051514.1;locus_tag=LNP58_RS21840;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_011258848.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4640445 4641458 . + . ID=gene-LNP58_RS21845;Name=LNP58_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21845;old_locus_tag=LNP58_21805 NZ_CP086372.1 Protein Homology CDS 4640445 4641458 . + 0 ID=cds-WP_041182103.1;Parent=gene-LNP58_RS21845;Dbxref=Genbank:WP_041182103.1;Name=WP_041182103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971030.1;locus_tag=LNP58_RS21845;product=tetratricopeptide repeat protein;protein_id=WP_041182103.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4641591 4641767 . - . ID=gene-LNP58_RS21850;Name=LNP58_RS21850;end_range=4641767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21850;old_locus_tag=LNP58_21810;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4641591 4641767 . - 0 ID=cds-LNP58_RS21850;Parent=gene-LNP58_RS21850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4641767,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS21850;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4641748 4643619 . - . ID=gene-LNP58_RS21855;Name=LNP58_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21855;old_locus_tag=LNP58_21815 NZ_CP086372.1 Protein Homology CDS 4641748 4643619 . - 0 ID=cds-WP_011258845.1;Parent=gene-LNP58_RS21855;Dbxref=Genbank:WP_011258845.1;Name=WP_011258845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258845.1;locus_tag=LNP58_RS21855;product=DUF4105 domain-containing protein;protein_id=WP_011258845.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4643616 4643915 . - . ID=gene-LNP58_RS21860;Name=LNP58_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21860;old_locus_tag=LNP58_21820 NZ_CP086372.1 Protein Homology CDS 4643616 4643915 . - 0 ID=cds-WP_011408424.1;Parent=gene-LNP58_RS21860;Dbxref=Genbank:WP_011408424.1;Name=WP_011408424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408424.1;locus_tag=LNP58_RS21860;product=DUF2388 domain-containing protein;protein_id=WP_011408424.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4643950 4645368 . - . ID=gene-LNP58_RS21865;Name=LNP58_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21865;old_locus_tag=LNP58_21825 NZ_CP086372.1 Protein Homology CDS 4643950 4645368 . - 0 ID=cds-WP_011258843.1;Parent=gene-LNP58_RS21865;Dbxref=Genbank:WP_011258843.1;Name=WP_011258843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155302.1;locus_tag=LNP58_RS21865;product=FAD-binding oxidoreductase;protein_id=WP_011258843.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4645577 4646818 . + . ID=gene-LNP58_RS21870;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LNP58_RS21870;old_locus_tag=LNP58_21830 NZ_CP086372.1 Protein Homology CDS 4645577 4646818 . + 0 ID=cds-WP_011258842.1;Parent=gene-LNP58_RS21870;Dbxref=Genbank:WP_011258842.1;Name=WP_011258842.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915394.1;locus_tag=LNP58_RS21870;product=phosphoglycerate dehydrogenase;protein_id=WP_011258842.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4646974 4647561 . - . ID=gene-LNP58_RS21875;Name=LNP58_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21875;old_locus_tag=LNP58_21835 NZ_CP086372.1 Protein Homology CDS 4646974 4647561 . - 0 ID=cds-WP_011258841.1;Parent=gene-LNP58_RS21875;Dbxref=Genbank:WP_011258841.1;Name=WP_011258841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367142.1;locus_tag=LNP58_RS21875;product=NUDIX hydrolase;protein_id=WP_011258841.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4647707 4649179 . + . ID=gene-LNP58_RS21880;Name=LNP58_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21880;old_locus_tag=LNP58_21840 NZ_CP086372.1 Protein Homology CDS 4647707 4649179 . + 0 ID=cds-WP_033013325.1;Parent=gene-LNP58_RS21880;Dbxref=Genbank:WP_033013325.1;Name=WP_033013325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922595.1;locus_tag=LNP58_RS21880;product=amino acid permease;protein_id=WP_033013325.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4649256 4650686 . + . ID=gene-LNP58_RS21885;Name=LNP58_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21885;old_locus_tag=LNP58_21845 NZ_CP086372.1 Protein Homology CDS 4649256 4650686 . + 0 ID=cds-WP_069959832.1;Parent=gene-LNP58_RS21885;Dbxref=Genbank:WP_069959832.1;Name=WP_069959832.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486240.1;locus_tag=LNP58_RS21885;product=amino acid permease;protein_id=WP_069959832.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4650775 4651452 . + . ID=gene-LNP58_RS21890;Name=LNP58_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21890;old_locus_tag=LNP58_21850 NZ_CP086372.1 Protein Homology CDS 4650775 4651452 . + 0 ID=cds-WP_011408418.1;Parent=gene-LNP58_RS21890;Dbxref=Genbank:WP_011408418.1;Name=WP_011408418.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258838.1;locus_tag=LNP58_RS21890;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_011408418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4651464 4652030 . + . ID=gene-LNP58_RS21895;Name=LNP58_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21895;old_locus_tag=LNP58_21855 NZ_CP086372.1 Protein Homology CDS 4651464 4652030 . + 0 ID=cds-WP_011408417.1;Parent=gene-LNP58_RS21895;Dbxref=Genbank:WP_011408417.1;Name=WP_011408417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571451.1;locus_tag=LNP58_RS21895;product=acireductone dioxygenase;protein_id=WP_011408417.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4652033 4652731 . + . ID=gene-LNP58_RS21900;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=LNP58_RS21900;old_locus_tag=LNP58_21860 NZ_CP086372.1 Protein Homology CDS 4652033 4652731 . + 0 ID=cds-WP_011408416.1;Parent=gene-LNP58_RS21900;Dbxref=Genbank:WP_011408416.1;Name=WP_011408416.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303202.1;locus_tag=LNP58_RS21900;product=acireductone synthase;protein_id=WP_011408416.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4652790 4652867 . - . ID=gene-LNP58_RS21905;Name=LNP58_RS21905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS21905;old_locus_tag=LNP58_21865 NZ_CP086372.1 cmsearch ncRNA 4652790 4652867 . - . ID=rna-LNP58_RS21905;Parent=gene-LNP58_RS21905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21905;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4652790 4652867 . - . ID=exon-LNP58_RS21905-1;Parent=rna-LNP58_RS21905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS21905;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4653059 4654144 . + . ID=gene-LNP58_RS21910;Name=LNP58_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21910;old_locus_tag=LNP58_21870 NZ_CP086372.1 Protein Homology CDS 4653059 4654144 . + 0 ID=cds-WP_042464827.1;Parent=gene-LNP58_RS21910;Dbxref=Genbank:WP_042464827.1;Name=WP_042464827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503181.1;locus_tag=LNP58_RS21910;product=peptidase C13;protein_id=WP_042464827.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4654592 4655859 . - . ID=gene-LNP58_RS21915;Name=LNP58_RS21915;end_range=4655859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21915;old_locus_tag=LNP58_21875;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4654592 4655859 . - 0 ID=cds-LNP58_RS21915;Parent=gene-LNP58_RS21915;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4655859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=LNP58_RS21915;partial=true;product=calcineurin-like phosphoesterase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4655976 4657295 . + . ID=gene-LNP58_RS21920;Name=LNP58_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21920;old_locus_tag=LNP58_21880 NZ_CP086372.1 Protein Homology CDS 4655976 4657295 . + 0 ID=cds-WP_115801889.1;Parent=gene-LNP58_RS21920;Dbxref=Genbank:WP_115801889.1;Name=WP_115801889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS21920;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801889.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4657584 4661711 . + . ID=gene-LNP58_RS21925;Name=LNP58_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21925;old_locus_tag=LNP58_21885 NZ_CP086372.1 Protein Homology CDS 4657584 4661711 . + 0 ID=cds-WP_069959831.1;Parent=gene-LNP58_RS21925;Dbxref=Genbank:WP_069959831.1;Name=WP_069959831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21925;product=TAL effector protein PthXo1;protein_id=WP_069959831.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4661852 4663327 . + . ID=gene-LNP58_RS21930;Name=LNP58_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21930;old_locus_tag=LNP58_21890 NZ_CP086372.1 Protein Homology CDS 4661852 4663327 . + 0 ID=cds-WP_069959830.1;Parent=gene-LNP58_RS21930;Dbxref=Genbank:WP_069959830.1;Name=WP_069959830.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS21930;product=IS5 family transposase;protein_id=WP_069959830.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4663477 4664628 . - . ID=gene-LNP58_RS21935;Name=LNP58_RS21935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21935;old_locus_tag=LNP58_21895;pseudo=true NZ_CP086372.1 Protein Homology CDS 4663477 4664628 . - 0 ID=cds-LNP58_RS21935;Parent=gene-LNP58_RS21935;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=LNP58_RS21935;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4664963 4668481 . + . ID=gene-LNP58_RS21940;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21940;old_locus_tag=LNP58_21900 NZ_CP086372.1 Protein Homology CDS 4664963 4668481 . + 0 ID=cds-WP_069959829.1;Parent=gene-LNP58_RS21940;Dbxref=Genbank:WP_069959829.1;Name=WP_069959829.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21940;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_069959829.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4668750 4668944 . + . ID=gene-LNP58_RS21945;Name=LNP58_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21945;old_locus_tag=LNP58_21905 NZ_CP086372.1 GeneMarkS-2+ CDS 4668750 4668944 . + 0 ID=cds-WP_042464821.1-4;Parent=gene-LNP58_RS21945;Dbxref=Genbank:WP_042464821.1;Name=WP_042464821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21945;product=hypothetical protein;protein_id=WP_042464821.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4668948 4669247 . + . ID=gene-LNP58_RS21950;Name=LNP58_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21950;old_locus_tag=LNP58_21910 NZ_CP086372.1 Protein Homology CDS 4668948 4669247 . + 0 ID=cds-WP_011408408.1-4;Parent=gene-LNP58_RS21950;Dbxref=Genbank:WP_011408408.1;Name=WP_011408408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450394.1;locus_tag=LNP58_RS21950;product=hypothetical protein;protein_id=WP_011408408.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4669471 4672986 . + . ID=gene-LNP58_RS21955;Name=avrBs3;gbkey=Gene;gene=avrBs3;gene_biotype=protein_coding;locus_tag=LNP58_RS21955;old_locus_tag=LNP58_21915 NZ_CP086372.1 Protein Homology CDS 4669471 4672986 . + 0 ID=cds-WP_228329626.1;Parent=gene-LNP58_RS21955;Dbxref=Genbank:WP_228329626.1;Name=WP_228329626.1;Ontology_term=GO:0030254;gbkey=CDS;gene=avrBs3;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=LNP58_RS21955;product=type III secretion system effector avirulence protein AvrBs3;protein_id=WP_228329626.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4673003 4673155 . + . ID=gene-LNP58_RS21960;Name=LNP58_RS21960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS21960;old_locus_tag=LNP58_21920;partial=true;pseudo=true;start_range=.,4673003 NZ_CP086372.1 Protein Homology CDS 4673003 4673155 . + 0 ID=cds-LNP58_RS21960;Parent=gene-LNP58_RS21960;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=LNP58_RS21960;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4673003;transl_table=11 NZ_CP086372.1 RefSeq gene 4673399 4673665 . + . ID=gene-LNP58_RS21965;Name=LNP58_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21965;old_locus_tag=LNP58_21925 NZ_CP086372.1 GeneMarkS-2+ CDS 4673399 4673665 . + 0 ID=cds-WP_153296780.1;Parent=gene-LNP58_RS21965;Dbxref=Genbank:WP_153296780.1;Name=WP_153296780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS21965;product=hypothetical protein;protein_id=WP_153296780.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4673890 4673979 . - . ID=gene-LNP58_RS21970;Name=LNP58_RS21970;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS21970;old_locus_tag=LNP58_21930 NZ_CP086372.1 tRNAscan-SE tRNA 4673890 4673979 . - . ID=rna-LNP58_RS21970;Parent=gene-LNP58_RS21970;anticodon=(pos:complement(4673943..4673945));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS21970;product=tRNA-Ser NZ_CP086372.1 tRNAscan-SE exon 4673890 4673979 . - . ID=exon-LNP58_RS21970-1;Parent=rna-LNP58_RS21970;anticodon=(pos:complement(4673943..4673945));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS21970;product=tRNA-Ser NZ_CP086372.1 RefSeq gene 4674356 4675369 . - . ID=gene-LNP58_RS21975;Name=LNP58_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21975;old_locus_tag=LNP58_21935 NZ_CP086372.1 Protein Homology CDS 4674356 4675369 . - 0 ID=cds-WP_011258825.1;Parent=gene-LNP58_RS21975;Dbxref=Genbank:WP_011258825.1;Name=WP_011258825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964080.1;locus_tag=LNP58_RS21975;product=LysR family transcriptional regulator;protein_id=WP_011258825.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4675469 4676065 . + . ID=gene-LNP58_RS21980;Name=LNP58_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21980;old_locus_tag=LNP58_21940 NZ_CP086372.1 Protein Homology CDS 4675469 4676065 . + 0 ID=cds-WP_069959827.1;Parent=gene-LNP58_RS21980;Dbxref=Genbank:WP_069959827.1;Name=WP_069959827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445099.1;locus_tag=LNP58_RS21980;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_069959827.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4676117 4677085 . + . ID=gene-LNP58_RS21985;Name=LNP58_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21985;old_locus_tag=LNP58_21945 NZ_CP086372.1 Protein Homology CDS 4676117 4677085 . + 0 ID=cds-WP_011407175.1-4;Parent=gene-LNP58_RS21985;Dbxref=Genbank:WP_011407175.1;Name=WP_011407175.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS21985;product=IS5-like element ISXo1 family transposase;protein_id=WP_011407175.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4677298 4678617 . - . ID=gene-LNP58_RS21990;Name=LNP58_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21990;old_locus_tag=LNP58_21950 NZ_CP086372.1 Protein Homology CDS 4677298 4678617 . - 0 ID=cds-WP_115801888.1;Parent=gene-LNP58_RS21990;Dbxref=Genbank:WP_115801888.1;Name=WP_115801888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS21990;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801888.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4679057 4679855 . + . ID=gene-LNP58_RS21995;Name=LNP58_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS21995;old_locus_tag=LNP58_21955 NZ_CP086372.1 Protein Homology CDS 4679057 4679328 . + 0 ID=cds-WP_094187763.1-6;Parent=gene-LNP58_RS21995;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS21995;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4679327 4679855 . + 1 ID=cds-WP_094187763.1-6;Parent=gene-LNP58_RS21995;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS21995;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4679871 4679945 . - . ID=gene-LNP58_RS22000;Name=LNP58_RS22000;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22000;old_locus_tag=LNP58_21960 NZ_CP086372.1 cmsearch ncRNA 4679871 4679945 . - . ID=rna-LNP58_RS22000;Parent=gene-LNP58_RS22000;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22000;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4679871 4679945 . - . ID=exon-LNP58_RS22000-1;Parent=rna-LNP58_RS22000;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22000;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4680005 4681354 . - . ID=gene-LNP58_RS22005;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LNP58_RS22005;old_locus_tag=LNP58_21965 NZ_CP086372.1 Protein Homology CDS 4680005 4681354 . - 0 ID=cds-WP_011258822.1;Parent=gene-LNP58_RS22005;Dbxref=Genbank:WP_011258822.1;Name=WP_011258822.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991172.1;locus_tag=LNP58_RS22005;product=serine--tRNA ligase;protein_id=WP_011258822.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4681466 4682125 . + . ID=gene-LNP58_RS22010;Name=LNP58_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22010;old_locus_tag=LNP58_21970 NZ_CP086372.1 Protein Homology CDS 4681466 4682125 . + 0 ID=cds-WP_012445101.1;Parent=gene-LNP58_RS22010;Dbxref=Genbank:WP_012445101.1;Name=WP_012445101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089877.1;locus_tag=LNP58_RS22010;product=energy transducer TonB;protein_id=WP_012445101.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4682486 4682953 . + . ID=gene-LNP58_RS22015;Name=LNP58_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22015;old_locus_tag=LNP58_21975 NZ_CP086372.1 Protein Homology CDS 4682486 4682953 . + 0 ID=cds-WP_027704061.1;Parent=gene-LNP58_RS22015;Dbxref=Genbank:WP_027704061.1;Name=WP_027704061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158182.1;locus_tag=LNP58_RS22015;product=energy transducer TonB;protein_id=WP_027704061.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4683200 4684242 . + . ID=gene-LNP58_RS22020;Name=LNP58_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22020;old_locus_tag=LNP58_21980 NZ_CP086372.1 Protein Homology CDS 4683200 4683395 . + 0 ID=cds-WP_229001949.1;Parent=gene-LNP58_RS22020;Dbxref=Genbank:WP_229001949.1;Name=WP_229001949.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS22020;product=IS3 family transposase;protein_id=WP_229001949.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4683395 4684242 . + 2 ID=cds-WP_229001949.1;Parent=gene-LNP58_RS22020;Dbxref=Genbank:WP_229001949.1;Name=WP_229001949.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=LNP58_RS22020;product=IS3 family transposase;protein_id=WP_229001949.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4684275 4684595 . - . ID=gene-LNP58_RS22025;Name=LNP58_RS22025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22025;old_locus_tag=LNP58_21985;partial=true;pseudo=true;start_range=.,4684275 NZ_CP086372.1 Protein Homology CDS 4684275 4684595 . - 0 ID=cds-LNP58_RS22025;Parent=gene-LNP58_RS22025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=LNP58_RS22025;partial=true;product=transposase;pseudo=true;start_range=.,4684275;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4684690 4685292 . + . ID=gene-LNP58_RS22030;Name=LNP58_RS22030;end_range=4685292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22030;old_locus_tag=LNP58_21990;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4684690 4685292 . + 0 ID=cds-LNP58_RS22030;Parent=gene-LNP58_RS22030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4685292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22030;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4685419 4686387 . - . ID=gene-LNP58_RS22035;Name=LNP58_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22035;old_locus_tag=LNP58_21995 NZ_CP086372.1 Protein Homology CDS 4685419 4686387 . - 0 ID=cds-WP_011257031.1-7;Parent=gene-LNP58_RS22035;Dbxref=Genbank:WP_011257031.1;Name=WP_011257031.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS22035;product=IS5-like element ISXo1 family transposase;protein_id=WP_011257031.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4686450 4686596 . + . ID=gene-LNP58_RS22040;Name=LNP58_RS22040;end_range=4686596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22040;old_locus_tag=LNP58_22000;partial=true;pseudo=true;start_range=.,4686450 NZ_CP086372.1 Protein Homology CDS 4686450 4686596 . + 0 ID=cds-LNP58_RS22040;Parent=gene-LNP58_RS22040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4686596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22040;partial=true;product=transposase;pseudo=true;start_range=.,4686450;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4686592 4687330 . - . ID=gene-LNP58_RS22045;Name=LNP58_RS22045;end_range=4687330,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22045;old_locus_tag=LNP58_22005;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4686592 4687330 . - 0 ID=cds-LNP58_RS22045;Parent=gene-LNP58_RS22045;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4687330,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611838.1;locus_tag=LNP58_RS22045;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4687419 4688384 . + . ID=gene-LNP58_RS22050;Name=LNP58_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22050;old_locus_tag=LNP58_22010 NZ_CP086372.1 Protein Homology CDS 4687419 4688384 . + 0 ID=cds-WP_109181932.1;Parent=gene-LNP58_RS22050;Dbxref=Genbank:WP_109181932.1;Name=WP_109181932.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS22050;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181932.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4688512 4689087 . + . ID=gene-LNP58_RS22055;Name=LNP58_RS22055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22055;old_locus_tag=LNP58_22015;partial=true;pseudo=true;start_range=.,4688512 NZ_CP086372.1 Protein Homology CDS 4688512 4689087 . + 0 ID=cds-LNP58_RS22055;Parent=gene-LNP58_RS22055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22055;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,4688512;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4689188 4689901 . - . ID=gene-LNP58_RS22060;Name=LNP58_RS22060;end_range=4689901,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22060;old_locus_tag=LNP58_22020;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4689188 4689901 . - 0 ID=cds-LNP58_RS22060;Parent=gene-LNP58_RS22060;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4689901,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS22060;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4690122 4690602 . - . ID=gene-LNP58_RS22065;Name=LNP58_RS22065;end_range=4690602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22065;old_locus_tag=LNP58_22025;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4690122 4690602 . - 0 ID=cds-LNP58_RS22065;Parent=gene-LNP58_RS22065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4690602,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22065;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4690614 4691579 . - . ID=gene-LNP58_RS22070;Name=LNP58_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22070;old_locus_tag=LNP58_22030 NZ_CP086372.1 Protein Homology CDS 4690614 4691579 . - 0 ID=cds-WP_109181931.1;Parent=gene-LNP58_RS22070;Dbxref=Genbank:WP_109181931.1;Name=WP_109181931.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS22070;product=IS1595-like element ISXo5 family transposase;protein_id=WP_109181931.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4691805 4692603 . + . ID=gene-LNP58_RS22075;Name=LNP58_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22075;old_locus_tag=LNP58_22035 NZ_CP086372.1 Protein Homology CDS 4691805 4692076 . + 0 ID=cds-WP_109181930.1;Parent=gene-LNP58_RS22075;Dbxref=Genbank:WP_109181930.1;Name=WP_109181930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS22075;product=IS5 family transposase;protein_id=WP_109181930.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4692075 4692603 . + 1 ID=cds-WP_109181930.1;Parent=gene-LNP58_RS22075;Dbxref=Genbank:WP_109181930.1;Name=WP_109181930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS22075;product=IS5 family transposase;protein_id=WP_109181930.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4692611 4692757 . - . ID=gene-LNP58_RS22080;Name=LNP58_RS22080;end_range=4692757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22080;old_locus_tag=LNP58_22040;partial=true;pseudo=true;start_range=.,4692611 NZ_CP086372.1 Protein Homology CDS 4692611 4692757 . - 0 ID=cds-LNP58_RS22080;Parent=gene-LNP58_RS22080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4692757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22080;partial=true;product=transposase;pseudo=true;start_range=.,4692611;transl_table=11 NZ_CP086372.1 RefSeq gene 4692883 4693851 . - . ID=gene-LNP58_RS22085;Name=LNP58_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22085;old_locus_tag=LNP58_22045 NZ_CP086372.1 Protein Homology CDS 4692883 4693851 . - 0 ID=cds-WP_011258803.1-6;Parent=gene-LNP58_RS22085;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS22085;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4694001 4695320 . - . ID=gene-LNP58_RS22090;Name=LNP58_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22090;old_locus_tag=LNP58_22050 NZ_CP086372.1 Protein Homology CDS 4694001 4695320 . - 0 ID=cds-WP_011407756.1-2;Parent=gene-LNP58_RS22090;Dbxref=Genbank:WP_011407756.1;Name=WP_011407756.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22090;product=IS701 family transposase;protein_id=WP_011407756.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4695520 4696488 . - . ID=gene-LNP58_RS22095;Name=LNP58_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22095;old_locus_tag=LNP58_22055 NZ_CP086372.1 Protein Homology CDS 4695520 4696488 . - 0 ID=cds-WP_011258802.1-18;Parent=gene-LNP58_RS22095;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS22095;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4696552 4697154 . - . ID=gene-LNP58_RS22100;Name=LNP58_RS22100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22100;old_locus_tag=LNP58_22060;partial=true;pseudo=true;start_range=.,4696552 NZ_CP086372.1 Protein Homology CDS 4696552 4697154 . - 0 ID=cds-LNP58_RS22100;Parent=gene-LNP58_RS22100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22100;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,4696552;transl_table=11 NZ_CP086372.1 RefSeq gene 4697349 4698548 . + . ID=gene-LNP58_RS22105;Name=LNP58_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22105;old_locus_tag=LNP58_22065 NZ_CP086372.1 Protein Homology CDS 4697349 4698548 . + 0 ID=cds-WP_011258800.1;Parent=gene-LNP58_RS22105;Dbxref=Genbank:WP_011258800.1;Name=WP_011258800.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503612.1;locus_tag=LNP58_RS22105;product=homoserine O-acetyltransferase;protein_id=WP_011258800.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4698697 4698873 . + . ID=gene-LNP58_RS22110;Name=LNP58_RS22110;end_range=4698873,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22110;old_locus_tag=LNP58_22070;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4698697 4698873 . + 0 ID=cds-LNP58_RS22110;Parent=gene-LNP58_RS22110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;end_range=4698873,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090331.1;locus_tag=LNP58_RS22110;partial=true;product=cold shock domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4699201 4700676 . + . ID=gene-LNP58_RS22115;Name=LNP58_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22115;old_locus_tag=LNP58_22075 NZ_CP086372.1 Protein Homology CDS 4699201 4700676 . + 0 ID=cds-WP_011408398.1;Parent=gene-LNP58_RS22115;Dbxref=Genbank:WP_011408398.1;Name=WP_011408398.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS22115;product=IS5-like element ISXoo5 family transposase;protein_id=WP_011408398.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4700731 4701915 . - . ID=gene-LNP58_RS22120;Name=LNP58_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22120;old_locus_tag=LNP58_22080 NZ_CP086372.1 Protein Homology CDS 4700731 4701915 . - 0 ID=cds-WP_011408397.1-2;Parent=gene-LNP58_RS22120;Dbxref=Genbank:WP_011408397.1;Name=WP_011408397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=LNP58_RS22120;product=IS256-like element IS1113 family transposase;protein_id=WP_011408397.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4702080 4702271 . + . ID=gene-LNP58_RS22125;Name=LNP58_RS22125;end_range=4702271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22125;old_locus_tag=LNP58_22085;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4702080 4702271 . + 0 ID=cds-LNP58_RS22125;Parent=gene-LNP58_RS22125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4702271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22125;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4702360 4703325 . + . ID=gene-LNP58_RS22130;Name=LNP58_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22130;old_locus_tag=LNP58_22090 NZ_CP086372.1 Protein Homology CDS 4702360 4703325 . + 0 ID=cds-WP_133265510.1;Parent=gene-LNP58_RS22130;Dbxref=Genbank:WP_133265510.1;Name=WP_133265510.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS22130;product=IS1595-like element ISXo5 family transposase;protein_id=WP_133265510.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4703332 4704465 . + . ID=gene-LNP58_RS22135;Name=LNP58_RS22135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22135;old_locus_tag=LNP58_22095;partial=true;pseudo=true;start_range=.,4703332 NZ_CP086372.1 Protein Homology CDS 4703332 4704465 . + 0 ID=cds-LNP58_RS22135;Parent=gene-LNP58_RS22135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22135;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,4703332;transl_table=11 NZ_CP086372.1 RefSeq gene 4704678 4705646 . - . ID=gene-LNP58_RS22140;Name=LNP58_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22140;old_locus_tag=LNP58_22100 NZ_CP086372.1 Protein Homology CDS 4704678 4705646 . - 0 ID=cds-WP_011258803.1-7;Parent=gene-LNP58_RS22140;Dbxref=Genbank:WP_011258803.1;Name=WP_011258803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=LNP58_RS22140;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4705805 4706152 . - . ID=gene-LNP58_RS22145;Name=LNP58_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22145;old_locus_tag=LNP58_22105 NZ_CP086372.1 Protein Homology CDS 4705805 4706152 . - 0 ID=cds-WP_011408388.1;Parent=gene-LNP58_RS22145;Dbxref=Genbank:WP_011408388.1;Name=WP_011408388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085601.1;locus_tag=LNP58_RS22145;product=hypothetical protein;protein_id=WP_011408388.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4706154 4706921 . - . ID=gene-LNP58_RS22150;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LNP58_RS22150;old_locus_tag=LNP58_22110 NZ_CP086372.1 Protein Homology CDS 4706154 4706921 . - 0 ID=cds-WP_011258793.1;Parent=gene-LNP58_RS22150;Dbxref=Genbank:WP_011258793.1;Name=WP_011258793.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445119.1;locus_tag=LNP58_RS22150;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011258793.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4707254 4707629 . - . ID=gene-LNP58_RS22155;Name=LNP58_RS22155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22155;old_locus_tag=LNP58_22115;pseudo=true NZ_CP086372.1 Protein Homology CDS 4707254 4707629 . - 0 ID=cds-LNP58_RS22155;Parent=gene-LNP58_RS22155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572181.1;locus_tag=LNP58_RS22155;product=GFA family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4707809 4707885 . - . ID=gene-LNP58_RS22160;Name=LNP58_RS22160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22160;old_locus_tag=LNP58_22120 NZ_CP086372.1 cmsearch ncRNA 4707809 4707885 . - . ID=rna-LNP58_RS22160;Parent=gene-LNP58_RS22160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22160;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4707809 4707885 . - . ID=exon-LNP58_RS22160-1;Parent=rna-LNP58_RS22160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22160;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4707992 4708790 . + . ID=gene-LNP58_RS22165;Name=LNP58_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22165;old_locus_tag=LNP58_22125 NZ_CP086372.1 Protein Homology CDS 4707992 4708263 . + 0 ID=cds-WP_109181926.1;Parent=gene-LNP58_RS22165;Dbxref=Genbank:WP_109181926.1;Name=WP_109181926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS22165;product=IS5 family transposase;protein_id=WP_109181926.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4708262 4708790 . + 1 ID=cds-WP_109181926.1;Parent=gene-LNP58_RS22165;Dbxref=Genbank:WP_109181926.1;Name=WP_109181926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=LNP58_RS22165;product=IS5 family transposase;protein_id=WP_109181926.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4709001 4711529 . - . ID=gene-LNP58_RS22170;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LNP58_RS22170;old_locus_tag=LNP58_22130 NZ_CP086372.1 Protein Homology CDS 4709001 4711529 . - 0 ID=cds-WP_011258790.1;Parent=gene-LNP58_RS22170;Dbxref=Genbank:WP_011258790.1;Name=WP_011258790.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445121.1;locus_tag=LNP58_RS22170;product=ribonuclease R;protein_id=WP_011258790.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4711651 4711737 . + . ID=gene-LNP58_RS22175;Name=LNP58_RS22175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LNP58_RS22175;old_locus_tag=LNP58_22135 NZ_CP086372.1 tRNAscan-SE tRNA 4711651 4711737 . + . ID=rna-LNP58_RS22175;Parent=gene-LNP58_RS22175;anticodon=(pos:4711685..4711687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS22175;product=tRNA-Leu NZ_CP086372.1 tRNAscan-SE exon 4711651 4711737 . + . ID=exon-LNP58_RS22175-1;Parent=rna-LNP58_RS22175;anticodon=(pos:4711685..4711687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LNP58_RS22175;product=tRNA-Leu NZ_CP086372.1 RefSeq gene 4712096 4713619 . - . ID=gene-LNP58_RS22180;Name=LNP58_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22180;old_locus_tag=LNP58_22140 NZ_CP086372.1 Protein Homology CDS 4712096 4713619 . - 0 ID=cds-WP_173340384.1;Parent=gene-LNP58_RS22180;Dbxref=Genbank:WP_173340384.1;Name=WP_173340384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438702.1;locus_tag=LNP58_RS22180;product=platelet-activating factor acetylhydrolase IB subunit;protein_id=WP_173340384.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4713774 4713850 . - . ID=gene-LNP58_RS22185;Name=LNP58_RS22185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22185;old_locus_tag=LNP58_22145 NZ_CP086372.1 cmsearch ncRNA 4713774 4713850 . - . ID=rna-LNP58_RS22185;Parent=gene-LNP58_RS22185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22185;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4713774 4713850 . - . ID=exon-LNP58_RS22185-1;Parent=rna-LNP58_RS22185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22185;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4713913 4714053 . - . ID=gene-LNP58_RS22190;Name=LNP58_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22190;old_locus_tag=LNP58_22150 NZ_CP086372.1 Protein Homology CDS 4713913 4714053 . - 0 ID=cds-WP_042464808.1;Parent=gene-LNP58_RS22190;Dbxref=Genbank:WP_042464808.1;Name=WP_042464808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301939.1;locus_tag=LNP58_RS22190;product=acyl-CoA dehydrogenase;protein_id=WP_042464808.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4714053 4715234 . - . ID=gene-LNP58_RS22195;Name=LNP58_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22195;old_locus_tag=LNP58_22155 NZ_CP086372.1 Protein Homology CDS 4714053 4715234 . - 0 ID=cds-WP_011408383.1;Parent=gene-LNP58_RS22195;Dbxref=Genbank:WP_011408383.1;Name=WP_011408383.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156817.1;locus_tag=LNP58_RS22195;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011408383.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4715323 4716318 . + . ID=gene-LNP58_RS22200;Name=LNP58_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22200;old_locus_tag=LNP58_22160 NZ_CP086372.1 Protein Homology CDS 4715323 4716318 . + 0 ID=cds-WP_011258786.1;Parent=gene-LNP58_RS22200;Dbxref=Genbank:WP_011258786.1;Name=WP_011258786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164067.1;locus_tag=LNP58_RS22200;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_011258786.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4716315 4717454 . + . ID=gene-LNP58_RS22205;Name=LNP58_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22205;old_locus_tag=LNP58_22165 NZ_CP086372.1 Protein Homology CDS 4716315 4717454 . + 0 ID=cds-WP_011408382.1;Parent=gene-LNP58_RS22205;Dbxref=Genbank:WP_011408382.1;Name=WP_011408382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380164.1;locus_tag=LNP58_RS22205;product=homocysteine S-methyltransferase family protein;protein_id=WP_011408382.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4717597 4720350 . + . ID=gene-LNP58_RS22210;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LNP58_RS22210;old_locus_tag=LNP58_22170 NZ_CP086372.1 Protein Homology CDS 4717597 4720350 . + 0 ID=cds-WP_011408381.1;Parent=gene-LNP58_RS22210;Dbxref=Genbank:WP_011408381.1;Name=WP_011408381.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160303.1;locus_tag=LNP58_RS22210;product=methionine synthase;protein_id=WP_011408381.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4720737 4721942 . - . ID=gene-LNP58_RS22215;Name=LNP58_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22215;old_locus_tag=LNP58_22175 NZ_CP086372.1 Protein Homology CDS 4720737 4721942 . - 0 ID=cds-WP_011408380.1;Parent=gene-LNP58_RS22215;Dbxref=Genbank:WP_011408380.1;Name=WP_011408380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258783.1;locus_tag=LNP58_RS22215;product=AGE family epimerase/isomerase;protein_id=WP_011408380.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4721939 4722925 . - . ID=gene-LNP58_RS22220;Name=LNP58_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22220;old_locus_tag=LNP58_22180 NZ_CP086372.1 Protein Homology CDS 4721939 4722925 . - 0 ID=cds-WP_011408379.1;Parent=gene-LNP58_RS22220;Dbxref=Genbank:WP_011408379.1;Name=WP_011408379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483712.1;locus_tag=LNP58_RS22220;product=carbohydrate kinase;protein_id=WP_011408379.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4722922 4724232 . - . ID=gene-LNP58_RS22225;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LNP58_RS22225;old_locus_tag=LNP58_22185 NZ_CP086372.1 Protein Homology CDS 4722922 4724232 . - 0 ID=cds-WP_011408378.1;Parent=gene-LNP58_RS22225;Dbxref=Genbank:WP_011408378.1;Name=WP_011408378.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408378.1;locus_tag=LNP58_RS22225;product=L-fucose:H+ symporter permease;protein_id=WP_011408378.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4724246 4725421 . - . ID=gene-LNP58_RS22230;Name=LNP58_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22230;old_locus_tag=LNP58_22190 NZ_CP086372.1 Protein Homology CDS 4724246 4725421 . - 0 ID=cds-WP_041182423.1;Parent=gene-LNP58_RS22230;Dbxref=Genbank:WP_041182423.1;Name=WP_041182423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156810.1;locus_tag=LNP58_RS22230;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_041182423.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4725562 4726407 . - . ID=gene-LNP58_RS22235;Name=LNP58_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22235;old_locus_tag=LNP58_22195 NZ_CP086372.1 Protein Homology CDS 4725562 4726407 . - 0 ID=cds-WP_042464805.1;Parent=gene-LNP58_RS22235;Dbxref=Genbank:WP_042464805.1;Name=WP_042464805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156809.1;locus_tag=LNP58_RS22235;product=transporter;protein_id=WP_042464805.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4726741 4727493 . - . ID=gene-LNP58_RS22240;Name=LNP58_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22240;old_locus_tag=LNP58_22200 NZ_CP086372.1 Protein Homology CDS 4726741 4727493 . - 0 ID=cds-WP_042464803.1;Parent=gene-LNP58_RS22240;Dbxref=Genbank:WP_042464803.1;Name=WP_042464803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463037.1;locus_tag=LNP58_RS22240;product=DUF2058 family protein;protein_id=WP_042464803.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4727494 4727730 . - . ID=gene-LNP58_RS22245;Name=LNP58_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22245;old_locus_tag=LNP58_22205 NZ_CP086372.1 Protein Homology CDS 4727494 4727730 . - 0 ID=cds-WP_011258777.1;Parent=gene-LNP58_RS22245;Dbxref=Genbank:WP_011258777.1;Name=WP_011258777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036690.1;locus_tag=LNP58_RS22245;product=SlyX family protein;protein_id=WP_011258777.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4727723 4729072 . - . ID=gene-LNP58_RS22250;Name=LNP58_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22250;old_locus_tag=LNP58_22210 NZ_CP086372.1 Protein Homology CDS 4727723 4729072 . - 0 ID=cds-WP_011408374.1;Parent=gene-LNP58_RS22250;Dbxref=Genbank:WP_011408374.1;Name=WP_011408374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804407.1;locus_tag=LNP58_RS22250;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_011408374.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4729098 4730063 . - . ID=gene-LNP58_RS22255;Name=LNP58_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22255;old_locus_tag=LNP58_22215 NZ_CP086372.1 Protein Homology CDS 4729098 4730063 . - 0 ID=cds-WP_027703707.1;Parent=gene-LNP58_RS22255;Dbxref=Genbank:WP_027703707.1;Name=WP_027703707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463036.1;locus_tag=LNP58_RS22255;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_027703707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4730155 4730712 . - . ID=gene-LNP58_RS22260;Name=LNP58_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22260;old_locus_tag=LNP58_22220 NZ_CP086372.1 Protein Homology CDS 4730155 4730712 . - 0 ID=cds-WP_011408372.1;Parent=gene-LNP58_RS22260;Dbxref=Genbank:WP_011408372.1;Name=WP_011408372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963377.1;locus_tag=LNP58_RS22260;product=glutathione peroxidase;protein_id=WP_011408372.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4730848 4731096 . + . ID=gene-LNP58_RS22265;Name=LNP58_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22265;old_locus_tag=LNP58_22225 NZ_CP086372.1 Protein Homology CDS 4730848 4731096 . + 0 ID=cds-WP_042464800.1;Parent=gene-LNP58_RS22265;Dbxref=Genbank:WP_042464800.1;Name=WP_042464800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366438.1;locus_tag=LNP58_RS22265;product=hypothetical protein;protein_id=WP_042464800.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4731099 4731461 . + . ID=gene-LNP58_RS22270;Name=LNP58_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22270;old_locus_tag=LNP58_22230 NZ_CP086372.1 Protein Homology CDS 4731099 4731461 . + 0 ID=cds-WP_014502778.1;Parent=gene-LNP58_RS22270;Dbxref=Genbank:WP_014502778.1;Name=WP_014502778.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988451.1;locus_tag=LNP58_RS22270;product=GntR family transcriptional regulator;protein_id=WP_014502778.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4731458 4732333 . + . ID=gene-LNP58_RS22275;Name=LNP58_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22275;old_locus_tag=LNP58_22235 NZ_CP086372.1 Protein Homology CDS 4731458 4732333 . + 0 ID=cds-WP_011258772.1;Parent=gene-LNP58_RS22275;Dbxref=Genbank:WP_011258772.1;Name=WP_011258772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913764.1;locus_tag=LNP58_RS22275;product=ABC transporter ATP-binding protein;protein_id=WP_011258772.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4732330 4733316 . + . ID=gene-LNP58_RS22280;Name=LNP58_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22280;old_locus_tag=LNP58_22240 NZ_CP086372.1 Protein Homology CDS 4732330 4733316 . + 0 ID=cds-WP_069963848.1;Parent=gene-LNP58_RS22280;Dbxref=Genbank:WP_069963848.1;Name=WP_069963848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036684.1;locus_tag=LNP58_RS22280;product=ABC transporter permease;protein_id=WP_069963848.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4733326 4734156 . + . ID=gene-LNP58_RS22285;Name=LNP58_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22285;old_locus_tag=LNP58_22245 NZ_CP086372.1 Protein Homology CDS 4733326 4734156 . + 0 ID=cds-WP_012445134.1;Parent=gene-LNP58_RS22285;Dbxref=Genbank:WP_012445134.1;Name=WP_012445134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849098.1;locus_tag=LNP58_RS22285;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_012445134.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4734212 4734403 . + . ID=gene-LNP58_RS22290;Name=LNP58_RS22290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22290;old_locus_tag=LNP58_22250;partial=true;pseudo=true;start_range=.,4734212 NZ_CP086372.1 Protein Homology CDS 4734212 4734403 . + 0 ID=cds-LNP58_RS22290;Parent=gene-LNP58_RS22290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578096.1;locus_tag=LNP58_RS22290;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4734212;transl_table=11 NZ_CP086372.1 RefSeq gene 4734789 4735211 . + . ID=gene-LNP58_RS22295;Name=LNP58_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22295;old_locus_tag=LNP58_22255 NZ_CP086372.1 Protein Homology CDS 4734789 4735211 . + 0 ID=cds-WP_027703710.1;Parent=gene-LNP58_RS22295;Dbxref=Genbank:WP_027703710.1;Name=WP_027703710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159043.1;locus_tag=LNP58_RS22295;product=hypothetical protein;protein_id=WP_027703710.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4735334 4736737 . - . ID=gene-LNP58_RS22300;Name=LNP58_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22300;old_locus_tag=LNP58_22260 NZ_CP086372.1 Protein Homology CDS 4735334 4736737 . - 0 ID=cds-WP_069963920.1;Parent=gene-LNP58_RS22300;Dbxref=Genbank:WP_069963920.1;Name=WP_069963920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346974.1;locus_tag=LNP58_RS22300;product=class II fumarate hydratase;protein_id=WP_069963920.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4736860 4737876 . + . ID=gene-LNP58_RS22305;Name=LNP58_RS22305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22305;old_locus_tag=LNP58_22265;pseudo=true NZ_CP086372.1 Protein Homology CDS 4736860 4737876 . + 0 ID=cds-LNP58_RS22305;Parent=gene-LNP58_RS22305;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=LNP58_RS22305;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4738189 4738952 . - . ID=gene-LNP58_RS22310;Name=LNP58_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22310;old_locus_tag=LNP58_22270 NZ_CP086372.1 Protein Homology CDS 4738637 4738952 . - 0 ID=cds-WP_094187715.1-14;Parent=gene-LNP58_RS22310;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS22310;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4738189 4738637 . - 2 ID=cds-WP_094187715.1-14;Parent=gene-LNP58_RS22310;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS22310;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4738967 4740026 . - . ID=gene-LNP58_RS22315;Name=LNP58_RS22315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22315;old_locus_tag=LNP58_22275;pseudo=true NZ_CP086372.1 Protein Homology CDS 4738967 4740026 . - 0 ID=cds-LNP58_RS22315;Parent=gene-LNP58_RS22315;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=LNP58_RS22315;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4740082 4740922 . + . ID=gene-LNP58_RS22320;Name=LNP58_RS22320;end_range=4740922,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22320;old_locus_tag=LNP58_22280;partial=true;pseudo=true;start_range=.,4740082 NZ_CP086372.1 Protein Homology CDS 4740082 4740922 . + 0 ID=cds-LNP58_RS22320;Parent=gene-LNP58_RS22320;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4740922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156798.1;locus_tag=LNP58_RS22320;partial=true;product=hemolysin family protein;pseudo=true;start_range=.,4740082;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4740924 4741777 . - . ID=gene-LNP58_RS22325;Name=LNP58_RS22325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22325;old_locus_tag=LNP58_22285;partial=true;pseudo=true;start_range=.,4740924 NZ_CP086372.1 Protein Homology CDS 4740924 4741777 . - 0 ID=cds-LNP58_RS22325;Parent=gene-LNP58_RS22325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118792.1;locus_tag=LNP58_RS22325;partial=true;product=CAP domain-containing protein;pseudo=true;start_range=.,4740924;transl_table=11 NZ_CP086372.1 RefSeq gene 4741975 4743342 . + . ID=gene-LNP58_RS22330;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LNP58_RS22330;old_locus_tag=LNP58_22290 NZ_CP086372.1 Protein Homology CDS 4741975 4743342 . + 0 ID=cds-WP_011258759.1;Parent=gene-LNP58_RS22330;Dbxref=Genbank:WP_011258759.1;Name=WP_011258759.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156796.1;locus_tag=LNP58_RS22330;product=adenylosuccinate lyase;protein_id=WP_011258759.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4743584 4744084 . + . ID=gene-LNP58_RS22335;Name=LNP58_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22335;old_locus_tag=LNP58_22295 NZ_CP086372.1 Protein Homology CDS 4743584 4744084 . + 0 ID=cds-WP_011258758.1;Parent=gene-LNP58_RS22335;Dbxref=Genbank:WP_011258758.1;Name=WP_011258758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346970.1;locus_tag=LNP58_RS22335;product=DUF3060 domain-containing protein;protein_id=WP_011258758.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4744272 4744347 . + . ID=gene-LNP58_RS22340;Name=LNP58_RS22340;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22340;old_locus_tag=LNP58_22300 NZ_CP086372.1 cmsearch ncRNA 4744272 4744347 . + . ID=rna-LNP58_RS22340;Parent=gene-LNP58_RS22340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22340;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4744272 4744347 . + . ID=exon-LNP58_RS22340-1;Parent=rna-LNP58_RS22340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22340;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4744364 4744627 . - . ID=gene-LNP58_RS22345;Name=LNP58_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22345;old_locus_tag=LNP58_22305 NZ_CP086372.1 Protein Homology CDS 4744364 4744627 . - 0 ID=cds-WP_041182090.1;Parent=gene-LNP58_RS22345;Dbxref=Genbank:WP_041182090.1;Name=WP_041182090.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156794.1;locus_tag=LNP58_RS22345;product=PDZ domain-containing protein;protein_id=WP_041182090.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4744965 4746464 . + . ID=gene-LNP58_RS22350;Name=LNP58_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22350;old_locus_tag=LNP58_22310 NZ_CP086372.1 Protein Homology CDS 4744965 4746464 . + 0 ID=cds-WP_011408362.1;Parent=gene-LNP58_RS22350;Dbxref=Genbank:WP_011408362.1;Name=WP_011408362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118789.1;locus_tag=LNP58_RS22350;product=cupin domain-containing protein;protein_id=WP_011408362.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4746461 4747393 . + . ID=gene-LNP58_RS22355;Name=LNP58_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22355;old_locus_tag=LNP58_22315 NZ_CP086372.1 Protein Homology CDS 4746461 4747393 . + 0 ID=cds-WP_011408361.1;Parent=gene-LNP58_RS22355;Dbxref=Genbank:WP_011408361.1;Name=WP_011408361.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571998.1;locus_tag=LNP58_RS22355;product=GNAT family N-acetyltransferase;protein_id=WP_011408361.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4747574 4750402 . + . ID=gene-LNP58_RS22360;Name=LNP58_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22360;old_locus_tag=LNP58_22320 NZ_CP086372.1 Protein Homology CDS 4747574 4750402 . + 0 ID=cds-WP_011258754.1;Parent=gene-LNP58_RS22360;Dbxref=Genbank:WP_011258754.1;Name=WP_011258754.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507330.1;locus_tag=LNP58_RS22360;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_011258754.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4750445 4751647 . + . ID=gene-LNP58_RS22365;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=LNP58_RS22365;old_locus_tag=LNP58_22325 NZ_CP086372.1 Protein Homology CDS 4750445 4751647 . + 0 ID=cds-WP_011258753.1;Parent=gene-LNP58_RS22365;Dbxref=Genbank:WP_011258753.1;Name=WP_011258753.1;Ontology_term=GO:0006099,GO:0006554,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572000.1;locus_tag=LNP58_RS22365;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_011258753.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4751889 4753325 . + . ID=gene-LNP58_RS22370;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LNP58_RS22370;old_locus_tag=LNP58_22330 NZ_CP086372.1 Protein Homology CDS 4751889 4753325 . + 0 ID=cds-WP_011258752.1;Parent=gene-LNP58_RS22370;Dbxref=Genbank:WP_011258752.1;Name=WP_011258752.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988423.1;locus_tag=LNP58_RS22370;product=dihydrolipoyl dehydrogenase;protein_id=WP_011258752.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4753524 4754117 . + . ID=gene-LNP58_RS22375;Name=LNP58_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22375;old_locus_tag=LNP58_22335 NZ_CP086372.1 Protein Homology CDS 4753524 4754117 . + 0 ID=cds-WP_011258751.1;Parent=gene-LNP58_RS22375;Dbxref=Genbank:WP_011258751.1;Name=WP_011258751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366391.1;locus_tag=LNP58_RS22375;product=TIGR00730 family Rossman fold protein;protein_id=WP_011258751.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4754376 4754978 . + . ID=gene-LNP58_RS22380;Name=LNP58_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22380;old_locus_tag=LNP58_22340 NZ_CP086372.1 Protein Homology CDS 4754376 4754978 . + 0 ID=cds-WP_027703751.1;Parent=gene-LNP58_RS22380;Dbxref=Genbank:WP_027703751.1;Name=WP_027703751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156787.1;locus_tag=LNP58_RS22380;product=IMPACT family protein;protein_id=WP_027703751.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4754975 4756744 . + . ID=gene-LNP58_RS22385;Name=LNP58_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22385;old_locus_tag=LNP58_22345 NZ_CP086372.1 Protein Homology CDS 4754975 4756744 . + 0 ID=cds-WP_075243526.1;Parent=gene-LNP58_RS22385;Dbxref=Genbank:WP_075243526.1;Name=WP_075243526.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156786.1;locus_tag=LNP58_RS22385;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_075243526.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4756845 4756919 . + . ID=gene-LNP58_RS22390;Name=LNP58_RS22390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22390;old_locus_tag=LNP58_22350 NZ_CP086372.1 cmsearch ncRNA 4756845 4756919 . + . ID=rna-LNP58_RS22390;Parent=gene-LNP58_RS22390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22390;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4756845 4756919 . + . ID=exon-LNP58_RS22390-1;Parent=rna-LNP58_RS22390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22390;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 4756986 4757634 . + . ID=gene-LNP58_RS22395;Name=LNP58_RS22395;end_range=4757634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22395;old_locus_tag=LNP58_22355;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4756986 4757634 . + 0 ID=cds-LNP58_RS22395;Parent=gene-LNP58_RS22395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4757634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964693.1;locus_tag=LNP58_RS22395;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4757632 4758744 . + . ID=gene-LNP58_RS22400;Name=LNP58_RS22400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22400;old_locus_tag=LNP58_22360;partial=true;pseudo=true;start_range=.,4757632 NZ_CP086372.1 Protein Homology CDS 4757632 4758744 . + 0 ID=cds-LNP58_RS22400;Parent=gene-LNP58_RS22400;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380228.1;locus_tag=LNP58_RS22400;partial=true;product=TolC family protein;pseudo=true;start_range=.,4757632;transl_table=11 NZ_CP086372.1 RefSeq gene 4759079 4760398 . + . ID=gene-LNP58_RS22405;Name=LNP58_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22405;old_locus_tag=LNP58_22365 NZ_CP086372.1 Protein Homology CDS 4759079 4760398 . + 0 ID=cds-WP_115801887.1;Parent=gene-LNP58_RS22405;Dbxref=Genbank:WP_115801887.1;Name=WP_115801887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS22405;product=IS701-like element ISXo15 family transposase;protein_id=WP_115801887.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4760768 4761889 . - . ID=gene-LNP58_RS22410;Name=LNP58_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22410;old_locus_tag=LNP58_22370 NZ_CP086372.1 Protein Homology CDS 4760768 4761889 . - 0 ID=cds-WP_011408356.1;Parent=gene-LNP58_RS22410;Dbxref=Genbank:WP_011408356.1;Name=WP_011408356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502753.1;locus_tag=LNP58_RS22410;product=prephenate dehydrogenase;protein_id=WP_011408356.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4761886 4762794 . - . ID=gene-LNP58_RS22415;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LNP58_RS22415;old_locus_tag=LNP58_22375 NZ_CP086372.1 Protein Homology CDS 4761886 4762794 . - 0 ID=cds-WP_011408355.1;Parent=gene-LNP58_RS22415;Dbxref=Genbank:WP_011408355.1;Name=WP_011408355.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804365.1;locus_tag=LNP58_RS22415;product=pyridoxal kinase;protein_id=WP_011408355.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4763323 4764453 . - . ID=gene-LNP58_RS22420;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LNP58_RS22420;old_locus_tag=LNP58_22380 NZ_CP086372.1 Protein Homology CDS 4763323 4764453 . - 0 ID=cds-WP_011258743.1;Parent=gene-LNP58_RS22420;Dbxref=Genbank:WP_011258743.1;Name=WP_011258743.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438731.1;locus_tag=LNP58_RS22420;product=molecular chaperone DnaJ;protein_id=WP_011258743.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4764613 4766538 . - . ID=gene-LNP58_RS22425;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LNP58_RS22425;old_locus_tag=LNP58_22385 NZ_CP086372.1 Protein Homology CDS 4764613 4766538 . - 0 ID=cds-WP_011408354.1;Parent=gene-LNP58_RS22425;Dbxref=Genbank:WP_011408354.1;Name=WP_011408354.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380232.1;locus_tag=LNP58_RS22425;product=molecular chaperone DnaK;protein_id=WP_011408354.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4766680 4767198 . - . ID=gene-LNP58_RS22430;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LNP58_RS22430;old_locus_tag=LNP58_22390 NZ_CP086372.1 Protein Homology CDS 4766680 4767198 . - 0 ID=cds-WP_011258741.1;Parent=gene-LNP58_RS22430;Dbxref=Genbank:WP_011258741.1;Name=WP_011258741.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=LNP58_RS22430;product=nucleotide exchange factor GrpE;protein_id=WP_011258741.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4767299 4768330 . - . ID=gene-LNP58_RS22435;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LNP58_RS22435;old_locus_tag=LNP58_22395 NZ_CP086372.1 Protein Homology CDS 4767299 4768330 . - 0 ID=cds-WP_012445153.1;Parent=gene-LNP58_RS22435;Dbxref=Genbank:WP_012445153.1;Name=WP_012445153.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483631.1;locus_tag=LNP58_RS22435;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_012445153.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4768468 4770132 . + . ID=gene-LNP58_RS22440;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LNP58_RS22440;old_locus_tag=LNP58_22400 NZ_CP086372.1 Protein Homology CDS 4768468 4770132 . + 0 ID=cds-WP_011408352.1;Parent=gene-LNP58_RS22440;Dbxref=Genbank:WP_011408352.1;Name=WP_011408352.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445154.1;locus_tag=LNP58_RS22440;product=DNA repair protein RecN;protein_id=WP_011408352.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4770575 4770985 . - . ID=gene-LNP58_RS22445;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LNP58_RS22445;old_locus_tag=LNP58_22405 NZ_CP086372.1 Protein Homology CDS 4770575 4770985 . - 0 ID=cds-WP_011408351.1;Parent=gene-LNP58_RS22445;Dbxref=Genbank:WP_011408351.1;Name=WP_011408351.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=LNP58_RS22445;product=ferric iron uptake transcriptional regulator;protein_id=WP_011408351.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4771090 4771485 . + . ID=gene-LNP58_RS22450;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LNP58_RS22450;old_locus_tag=LNP58_22410 NZ_CP086372.1 Protein Homology CDS 4771090 4771485 . + 0 ID=cds-WP_011258737.1;Parent=gene-LNP58_RS22450;Dbxref=Genbank:WP_011258737.1;Name=WP_011258737.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449455.1;locus_tag=LNP58_RS22450;product=outer membrane protein assembly factor BamE;protein_id=WP_011258737.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4771832 4772107 . - . ID=gene-LNP58_RS22455;Name=LNP58_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22455;old_locus_tag=LNP58_22415 NZ_CP086372.1 Protein Homology CDS 4771832 4772107 . - 0 ID=cds-WP_011408349.1;Parent=gene-LNP58_RS22455;Dbxref=Genbank:WP_011408349.1;Name=WP_011408349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258736.1;locus_tag=LNP58_RS22455;product=RnfH family protein;protein_id=WP_011408349.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4772121 4772552 . - . ID=gene-LNP58_RS22460;Name=LNP58_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22460;old_locus_tag=LNP58_22420 NZ_CP086372.1 Protein Homology CDS 4772121 4772552 . - 0 ID=cds-WP_011258735.1;Parent=gene-LNP58_RS22460;Dbxref=Genbank:WP_011258735.1;Name=WP_011258735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901567.1;locus_tag=LNP58_RS22460;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_011258735.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4772613 4773116 . + . ID=gene-LNP58_RS22465;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LNP58_RS22465;old_locus_tag=LNP58_22425 NZ_CP086372.1 Protein Homology CDS 4772613 4773116 . + 0 ID=cds-WP_011408348.1;Parent=gene-LNP58_RS22465;Dbxref=Genbank:WP_011408348.1;Name=WP_011408348.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050971.1;locus_tag=LNP58_RS22465;product=SsrA-binding protein SmpB;protein_id=WP_011408348.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4773260 4773784 . - . ID=gene-LNP58_RS22470;Name=LNP58_RS22470;end_range=4773784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22470;old_locus_tag=LNP58_22430;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4773260 4773784 . - 0 ID=cds-LNP58_RS22470;Parent=gene-LNP58_RS22470;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=4773784,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163234.1;locus_tag=LNP58_RS22470;partial=true;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4773829 4774305 . + . ID=gene-LNP58_RS22475;Name=LNP58_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22475;old_locus_tag=LNP58_22435 NZ_CP086372.1 Protein Homology CDS 4773829 4774305 . + 0 ID=cds-WP_011258733.1;Parent=gene-LNP58_RS22475;Dbxref=Genbank:WP_011258733.1;Name=WP_011258733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448491.1;locus_tag=LNP58_RS22475;product=LEA type 2 family protein;protein_id=WP_011258733.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4774343 4776136 . + . ID=gene-LNP58_RS22480;Name=LNP58_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22480;old_locus_tag=LNP58_22440 NZ_CP086372.1 Protein Homology CDS 4774343 4776136 . + 0 ID=cds-WP_011258732.1;Parent=gene-LNP58_RS22480;Dbxref=Genbank:WP_011258732.1;Name=WP_011258732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258732.1;locus_tag=LNP58_RS22480;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_011258732.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4776402 4777091 . + . ID=gene-LNP58_RS22485;Name=LNP58_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22485;old_locus_tag=LNP58_22445 NZ_CP086372.1 Protein Homology CDS 4776402 4777091 . + 0 ID=cds-WP_011258731.1;Parent=gene-LNP58_RS22485;Dbxref=Genbank:WP_011258731.1;Name=WP_011258731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408346.1;locus_tag=LNP58_RS22485;product=HNH endonuclease;protein_id=WP_011258731.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4777489 4779405 . + . ID=gene-LNP58_RS22490;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LNP58_RS22490;old_locus_tag=LNP58_22450 NZ_CP086372.1 Protein Homology CDS 4777489 4779405 . + 0 ID=cds-WP_011258730.1;Parent=gene-LNP58_RS22490;Dbxref=Genbank:WP_011258730.1;Name=WP_011258730.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037575.1;locus_tag=LNP58_RS22490;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_011258730.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4779442 4780687 . - . ID=gene-LNP58_RS22495;Name=LNP58_RS22495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22495;old_locus_tag=LNP58_22455;pseudo=true NZ_CP086372.1 Protein Homology CDS 4779442 4780687 . - 0 ID=cds-LNP58_RS22495;Parent=gene-LNP58_RS22495;Note=frameshifted%3B internal stop;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848791.1;locus_tag=LNP58_RS22495;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4780677 4780943 . - . ID=gene-LNP58_RS22500;Name=LNP58_RS22500;end_range=4780943,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22500;old_locus_tag=LNP58_22460;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4780677 4780943 . - 0 ID=cds-LNP58_RS22500;Parent=gene-LNP58_RS22500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4780943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363506.1;locus_tag=LNP58_RS22500;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4780997 4781962 . + . ID=gene-LNP58_RS22505;Name=LNP58_RS22505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22505;old_locus_tag=LNP58_22465;pseudo=true NZ_CP086372.1 Protein Homology CDS 4780997 4781962 . + 0 ID=cds-LNP58_RS22505;Parent=gene-LNP58_RS22505;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=LNP58_RS22505;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4782041 4783006 . + . ID=gene-LNP58_RS22510;Name=LNP58_RS22510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22510;old_locus_tag=LNP58_22470;pseudo=true NZ_CP086372.1 Protein Homology CDS 4782041 4783006 . + 0 ID=cds-LNP58_RS22510;Parent=gene-LNP58_RS22510;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS22510;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4783089 4784096 . + . ID=gene-LNP58_RS22515;Name=LNP58_RS22515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22515;old_locus_tag=LNP58_22475;partial=true;pseudo=true;start_range=.,4783089 NZ_CP086372.1 Protein Homology CDS 4783089 4784096 . + 0 ID=cds-LNP58_RS22515;Parent=gene-LNP58_RS22515;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=LNP58_RS22515;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4783089;transl_table=11 NZ_CP086372.1 RefSeq gene 4784452 4784700 . - . ID=gene-LNP58_RS22520;Name=LNP58_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22520;old_locus_tag=LNP58_22480 NZ_CP086372.1 Protein Homology CDS 4784452 4784700 . - 0 ID=cds-WP_011258724.1;Parent=gene-LNP58_RS22520;Dbxref=Genbank:WP_011258724.1;Name=WP_011258724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155755.1;locus_tag=LNP58_RS22520;product=hypothetical protein;protein_id=WP_011258724.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4784895 4785659 . + . ID=gene-LNP58_RS22525;Name=LNP58_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22525;old_locus_tag=LNP58_22485;pseudo=true NZ_CP086372.1 Protein Homology CDS 4784895 4785659 . + 0 ID=cds-LNP58_RS22525;Parent=gene-LNP58_RS22525;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LNP58_RS22525;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4785656 4786390 . - . ID=gene-LNP58_RS22530;Name=LNP58_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22530;old_locus_tag=LNP58_22490 NZ_CP086372.1 Protein Homology CDS 4785656 4786390 . - 0 ID=cds-WP_011258723.1;Parent=gene-LNP58_RS22530;Dbxref=Genbank:WP_011258723.1;Name=WP_011258723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258723.1;locus_tag=LNP58_RS22530;product=serine hydrolase domain-containing protein;protein_id=WP_011258723.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4786441 4788021 . - . ID=gene-LNP58_RS22535;Name=LNP58_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22535;old_locus_tag=LNP58_22495 NZ_CP086372.1 Protein Homology CDS 4786441 4788021 . - 0 ID=cds-WP_011258722.1;Parent=gene-LNP58_RS22535;Dbxref=Genbank:WP_011258722.1;Name=WP_011258722.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919973.1;locus_tag=LNP58_RS22535;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_011258722.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4788028 4789221 . - . ID=gene-LNP58_RS22540;Name=LNP58_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22540;old_locus_tag=LNP58_22500 NZ_CP086372.1 Protein Homology CDS 4788028 4789221 . - 0 ID=cds-WP_011408343.1;Parent=gene-LNP58_RS22540;Dbxref=Genbank:WP_011408343.1;Name=WP_011408343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168701.1;locus_tag=LNP58_RS22540;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011408343.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4789232 4790704 . - . ID=gene-LNP58_RS22545;Name=LNP58_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22545;old_locus_tag=LNP58_22505 NZ_CP086372.1 Protein Homology CDS 4789232 4790704 . - 0 ID=cds-WP_173340396.1;Parent=gene-LNP58_RS22545;Dbxref=Genbank:WP_173340396.1;Name=WP_173340396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117698.1;locus_tag=LNP58_RS22545;product=AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor;protein_id=WP_173340396.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4790746 4791186 . - . ID=gene-LNP58_RS22550;Name=LNP58_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22550;old_locus_tag=LNP58_22510 NZ_CP086372.1 Protein Homology CDS 4790746 4791186 . - 0 ID=cds-WP_011408341.1;Parent=gene-LNP58_RS22550;Dbxref=Genbank:WP_011408341.1;Name=WP_011408341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089765.1;locus_tag=LNP58_RS22550;product=MarR family transcriptional regulator;protein_id=WP_011408341.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4791308 4792155 . + . ID=gene-LNP58_RS22555;Name=LNP58_RS22555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22555;old_locus_tag=LNP58_22515;pseudo=true NZ_CP086372.1 Protein Homology CDS 4791308 4792155 . + 0 ID=cds-LNP58_RS22555;Parent=gene-LNP58_RS22555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463002.1;locus_tag=LNP58_RS22555;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4792216 4794459 . + . ID=gene-LNP58_RS22560;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LNP58_RS22560;old_locus_tag=LNP58_22520 NZ_CP086372.1 Protein Homology CDS 4792216 4794459 . + 0 ID=cds-WP_011408339.1;Parent=gene-LNP58_RS22560;Dbxref=Genbank:WP_011408339.1;Name=WP_011408339.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483492.1;locus_tag=LNP58_RS22560;product=DNA topoisomerase IV subunit A;protein_id=WP_011408339.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4794915 4795400 . - . ID=gene-LNP58_RS22565;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LNP58_RS22565;old_locus_tag=LNP58_22525 NZ_CP086372.1 Protein Homology CDS 4794915 4795400 . - 0 ID=cds-WP_011408338.1;Parent=gene-LNP58_RS22565;Dbxref=Genbank:WP_011408338.1;Name=WP_011408338.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911751.1;locus_tag=LNP58_RS22565;product=bacterioferritin;protein_id=WP_011408338.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4795547 4797964 . + . ID=gene-LNP58_RS22570;Name=LNP58_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22570;old_locus_tag=LNP58_22530 NZ_CP086372.1 Protein Homology CDS 4795547 4797964 . + 0 ID=cds-WP_012445169.1;Parent=gene-LNP58_RS22570;Dbxref=Genbank:WP_012445169.1;Name=WP_012445169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300242.1;locus_tag=LNP58_RS22570;product=penicillin acylase family protein;protein_id=WP_012445169.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4798527 4800653 . + . ID=gene-LNP58_RS22575;Name=LNP58_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22575;old_locus_tag=LNP58_22535 NZ_CP086372.1 Protein Homology CDS 4798527 4800653 . + 0 ID=cds-WP_011258714.1;Parent=gene-LNP58_RS22575;Dbxref=Genbank:WP_011258714.1;Name=WP_011258714.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925026.1;locus_tag=LNP58_RS22575;product=TonB-dependent siderophore receptor;protein_id=WP_011258714.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4801005 4802136 . + . ID=gene-LNP58_RS22580;Name=LNP58_RS22580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22580;old_locus_tag=LNP58_22540;pseudo=true NZ_CP086372.1 Protein Homology CDS 4801005 4802136 . + 0 ID=cds-LNP58_RS22580;Parent=gene-LNP58_RS22580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155705.1;locus_tag=LNP58_RS22580;product=right-handed parallel beta-helix repeat-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4802205 4803899 . - . ID=gene-LNP58_RS22585;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LNP58_RS22585;old_locus_tag=LNP58_22545 NZ_CP086372.1 Protein Homology CDS 4802205 4803899 . - 0 ID=cds-WP_011258712.1;Parent=gene-LNP58_RS22585;Dbxref=Genbank:WP_011258712.1;Name=WP_011258712.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988264.1;locus_tag=LNP58_RS22585;product=asparagine synthase B;protein_id=WP_011258712.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4804194 4805324 . - . ID=gene-LNP58_RS22590;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LNP58_RS22590;old_locus_tag=LNP58_22550 NZ_CP086372.1 Protein Homology CDS 4804194 4805324 . - 0 ID=cds-WP_011408336.1;Parent=gene-LNP58_RS22590;Dbxref=Genbank:WP_011408336.1;Name=WP_011408336.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346903.1;locus_tag=LNP58_RS22590;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_011408336.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4805329 4805829 . - . ID=gene-LNP58_RS22595;Name=LNP58_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22595;old_locus_tag=LNP58_22555 NZ_CP086372.1 Protein Homology CDS 4805329 4805829 . - 0 ID=cds-WP_011408335.1;Parent=gene-LNP58_RS22595;Dbxref=Genbank:WP_011408335.1;Name=WP_011408335.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301347.1;locus_tag=LNP58_RS22595;product=GNAT family N-acetyltransferase;protein_id=WP_011408335.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4805826 4806182 . - . ID=gene-LNP58_RS22600;Name=LNP58_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22600;old_locus_tag=LNP58_22560 NZ_CP086372.1 Protein Homology CDS 4805826 4806182 . - 0 ID=cds-WP_011408334.1;Parent=gene-LNP58_RS22600;Dbxref=Genbank:WP_011408334.1;Name=WP_011408334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115327.1;locus_tag=LNP58_RS22600;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_011408334.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4806242 4806562 . - . ID=gene-LNP58_RS22605;Name=LNP58_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22605;old_locus_tag=LNP58_22565 NZ_CP086372.1 Protein Homology CDS 4806242 4806562 . - 0 ID=cds-WP_011408333.1;Parent=gene-LNP58_RS22605;Dbxref=Genbank:WP_011408333.1;Name=WP_011408333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408333.1;locus_tag=LNP58_RS22605;product=hypothetical protein;protein_id=WP_011408333.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4806645 4807841 . - . ID=gene-LNP58_RS22610;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LNP58_RS22610;old_locus_tag=LNP58_22570 NZ_CP086372.1 Protein Homology CDS 4806645 4807841 . - 0 ID=cds-WP_012445174.1;Parent=gene-LNP58_RS22610;Dbxref=Genbank:WP_012445174.1;Name=WP_012445174.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576699.1;locus_tag=LNP58_RS22610;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_012445174.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4807858 4810467 . - . ID=gene-LNP58_RS22615;Name=LNP58_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22615;old_locus_tag=LNP58_22575 NZ_CP086372.1 Protein Homology CDS 4807858 4810467 . - 0 ID=cds-WP_011408332.1;Parent=gene-LNP58_RS22615;Dbxref=Genbank:WP_011408332.1;Name=WP_011408332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576698.1;locus_tag=LNP58_RS22615;product=[protein-PII] uridylyltransferase;protein_id=WP_011408332.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4810464 4811240 . - . ID=gene-LNP58_RS22620;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LNP58_RS22620;old_locus_tag=LNP58_22580 NZ_CP086372.1 Protein Homology CDS 4810464 4811240 . - 0 ID=cds-WP_011258707.1;Parent=gene-LNP58_RS22620;Dbxref=Genbank:WP_011258707.1;Name=WP_011258707.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366184.1;locus_tag=LNP58_RS22620;product=type I methionyl aminopeptidase;protein_id=WP_011258707.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4811533 4812084 . + . ID=gene-LNP58_RS22625;Name=LNP58_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22625;old_locus_tag=LNP58_22585 NZ_CP086372.1 Protein Homology CDS 4811533 4812084 . + 0 ID=cds-WP_099051284.1;Parent=gene-LNP58_RS22625;Dbxref=Genbank:WP_099051284.1;Name=WP_099051284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576696.1;locus_tag=LNP58_RS22625;product=spore coat U domain-containing protein;protein_id=WP_099051284.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4812093 4812863 . + . ID=gene-LNP58_RS22630;Name=LNP58_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22630;old_locus_tag=LNP58_22590 NZ_CP086372.1 Protein Homology CDS 4812093 4812863 . + 0 ID=cds-WP_011408330.1;Parent=gene-LNP58_RS22630;Dbxref=Genbank:WP_011408330.1;Name=WP_011408330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089755.1;locus_tag=LNP58_RS22630;product=molecular chaperone;protein_id=WP_011408330.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4812880 4815231 . + . ID=gene-LNP58_RS22635;Name=LNP58_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22635;old_locus_tag=LNP58_22595 NZ_CP086372.1 Protein Homology CDS 4812880 4815231 . + 0 ID=cds-WP_011258704.1;Parent=gene-LNP58_RS22635;Dbxref=Genbank:WP_011258704.1;Name=WP_011258704.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169461.1;locus_tag=LNP58_RS22635;product=fimbria/pilus outer membrane usher protein;protein_id=WP_011258704.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4815228 4816262 . + . ID=gene-LNP58_RS22640;Name=LNP58_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22640;old_locus_tag=LNP58_22600 NZ_CP086372.1 Protein Homology CDS 4815228 4816262 . + 0 ID=cds-WP_011258703.1;Parent=gene-LNP58_RS22640;Dbxref=Genbank:WP_011258703.1;Name=WP_011258703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155696.1;locus_tag=LNP58_RS22640;product=spore coat U domain-containing protein;protein_id=WP_011258703.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4816309 4816641 . + . ID=gene-LNP58_RS22645;Name=LNP58_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22645;old_locus_tag=LNP58_22605 NZ_CP086372.1 Protein Homology CDS 4816309 4816641 . + 0 ID=cds-WP_041182086.1;Parent=gene-LNP58_RS22645;Dbxref=Genbank:WP_041182086.1;Name=WP_041182086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849735.1;locus_tag=LNP58_RS22645;product=hypothetical protein;protein_id=WP_041182086.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4816644 4817369 . + . ID=gene-LNP58_RS22650;Name=LNP58_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22650;old_locus_tag=LNP58_22610 NZ_CP086372.1 Protein Homology CDS 4816644 4817369 . + 0 ID=cds-WP_011408326.1;Parent=gene-LNP58_RS22650;Dbxref=Genbank:WP_011408326.1;Name=WP_011408326.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921629.1;locus_tag=LNP58_RS22650;product=fimbria/pilus periplasmic chaperone;protein_id=WP_011408326.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4817745 4818548 . + . ID=gene-LNP58_RS22655;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LNP58_RS22655;old_locus_tag=LNP58_22615 NZ_CP086372.1 Protein Homology CDS 4817745 4818548 . + 0 ID=cds-WP_011258701.1;Parent=gene-LNP58_RS22655;Dbxref=Genbank:WP_011258701.1;Name=WP_011258701.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258701.1;locus_tag=LNP58_RS22655;product=30S ribosomal protein S2;protein_id=WP_011258701.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4818718 4819596 . + . ID=gene-LNP58_RS22660;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LNP58_RS22660;old_locus_tag=LNP58_22620 NZ_CP086372.1 Protein Homology CDS 4818718 4819596 . + 0 ID=cds-WP_011258700.1;Parent=gene-LNP58_RS22660;Dbxref=Genbank:WP_011258700.1;Name=WP_011258700.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962895.1;locus_tag=LNP58_RS22660;product=translation elongation factor Ts;protein_id=WP_011258700.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4819859 4820044 . + . ID=gene-LNP58_RS22665;Name=LNP58_RS22665;end_range=4820044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22665;old_locus_tag=LNP58_22625;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4819859 4820044 . + 0 ID=cds-LNP58_RS22665;Parent=gene-LNP58_RS22665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4820044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366167.1;locus_tag=LNP58_RS22665;partial=true;product=HDOD domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4820158 4820880 . + . ID=gene-LNP58_RS22670;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LNP58_RS22670;old_locus_tag=LNP58_22630 NZ_CP086372.1 Protein Homology CDS 4820158 4820880 . + 0 ID=cds-WP_011258698.1;Parent=gene-LNP58_RS22670;Dbxref=Genbank:WP_011258698.1;Name=WP_011258698.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366166.1;locus_tag=LNP58_RS22670;product=UMP kinase;protein_id=WP_011258698.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4821061 4821618 . + . ID=gene-LNP58_RS22675;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LNP58_RS22675;old_locus_tag=LNP58_22635 NZ_CP086372.1 Protein Homology CDS 4821061 4821618 . + 0 ID=cds-WP_011258697.1;Parent=gene-LNP58_RS22675;Dbxref=Genbank:WP_011258697.1;Name=WP_011258697.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036562.1;locus_tag=LNP58_RS22675;product=ribosome recycling factor;protein_id=WP_011258697.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4821636 4822397 . + . ID=gene-LNP58_RS22680;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LNP58_RS22680;old_locus_tag=LNP58_22640 NZ_CP086372.1 Protein Homology CDS 4821636 4822397 . + 0 ID=cds-WP_027703358.1;Parent=gene-LNP58_RS22680;Dbxref=Genbank:WP_027703358.1;Name=WP_027703358.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=LNP58_RS22680;product=polyprenyl diphosphate synthase;protein_id=WP_027703358.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4822394 4823221 . + . ID=gene-LNP58_RS22685;Name=LNP58_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22685;old_locus_tag=LNP58_22645 NZ_CP086372.1 Protein Homology CDS 4822394 4823221 . + 0 ID=cds-WP_011258695.1;Parent=gene-LNP58_RS22685;Dbxref=Genbank:WP_011258695.1;Name=WP_011258695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258695.1;locus_tag=LNP58_RS22685;product=phosphatidate cytidylyltransferase;protein_id=WP_011258695.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4823224 4824414 . + . ID=gene-LNP58_RS22690;Name=LNP58_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22690;old_locus_tag=LNP58_22650 NZ_CP086372.1 Protein Homology CDS 4823224 4824414 . + 0 ID=cds-WP_011258694.1;Parent=gene-LNP58_RS22690;Dbxref=Genbank:WP_011258694.1;Name=WP_011258694.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485371.1;locus_tag=LNP58_RS22690;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_011258694.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4824441 4825787 . + . ID=gene-LNP58_RS22695;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LNP58_RS22695;old_locus_tag=LNP58_22655 NZ_CP086372.1 Protein Homology CDS 4824441 4825787 . + 0 ID=cds-WP_011408324.1;Parent=gene-LNP58_RS22695;Dbxref=Genbank:WP_011408324.1;Name=WP_011408324.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304858.1;locus_tag=LNP58_RS22695;product=RIP metalloprotease RseP;protein_id=WP_011408324.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4825871 4828237 . + . ID=gene-LNP58_RS22700;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LNP58_RS22700;old_locus_tag=LNP58_22660 NZ_CP086372.1 Protein Homology CDS 4825871 4828237 . + 0 ID=cds-WP_012445188.1;Parent=gene-LNP58_RS22700;Dbxref=Genbank:WP_012445188.1;Name=WP_012445188.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117511.1;locus_tag=LNP58_RS22700;product=outer membrane protein assembly factor BamA;protein_id=WP_012445188.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4828315 4828509 . - . ID=gene-LNP58_RS22705;Name=LNP58_RS22705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22705;old_locus_tag=LNP58_22665;pseudo=true NZ_CP086372.1 Protein Homology CDS 4828315 4828509 . - 0 ID=cds-LNP58_RS22705;Parent=gene-LNP58_RS22705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159402.1;locus_tag=LNP58_RS22705;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4828637 4829650 . + . ID=gene-LNP58_RS22710;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LNP58_RS22710;old_locus_tag=LNP58_22670 NZ_CP086372.1 Protein Homology CDS 4828637 4829650 . + 0 ID=cds-WP_069959820.1;Parent=gene-LNP58_RS22710;Dbxref=Genbank:WP_069959820.1;Name=WP_069959820.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965614.1;locus_tag=LNP58_RS22710;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_069959820.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4829647 4830108 . + . ID=gene-LNP58_RS22715;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LNP58_RS22715;old_locus_tag=LNP58_22675 NZ_CP086372.1 Protein Homology CDS 4829647 4830108 . + 0 ID=cds-WP_011258690.1;Parent=gene-LNP58_RS22715;Dbxref=Genbank:WP_011258690.1;Name=WP_011258690.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036554.1;locus_tag=LNP58_RS22715;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_011258690.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4830132 4830923 . + . ID=gene-LNP58_RS22720;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LNP58_RS22720;old_locus_tag=LNP58_22680 NZ_CP086372.1 Protein Homology CDS 4830132 4830923 . + 0 ID=cds-WP_011258689.1;Parent=gene-LNP58_RS22720;Dbxref=Genbank:WP_011258689.1;Name=WP_011258689.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507232.1;locus_tag=LNP58_RS22720;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_011258689.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4830920 4832218 . + . ID=gene-LNP58_RS22725;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LNP58_RS22725;old_locus_tag=LNP58_22685 NZ_CP086372.1 Protein Homology CDS 4830920 4832218 . + 0 ID=cds-WP_011258688.1;Parent=gene-LNP58_RS22725;Dbxref=Genbank:WP_011258688.1;Name=WP_011258688.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258688.1;locus_tag=LNP58_RS22725;product=lipid-A-disaccharide synthase;protein_id=WP_011258688.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4832215 4832955 . + . ID=gene-LNP58_RS22730;Name=LNP58_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22730;old_locus_tag=LNP58_22690 NZ_CP086372.1 Protein Homology CDS 4832215 4832955 . + 0 ID=cds-WP_011408322.1;Parent=gene-LNP58_RS22730;Dbxref=Genbank:WP_011408322.1;Name=WP_011408322.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408322.1;locus_tag=LNP58_RS22730;product=ribonuclease HII;protein_id=WP_011408322.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4833413 4837003 . + . ID=gene-LNP58_RS22735;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LNP58_RS22735;old_locus_tag=LNP58_22695 NZ_CP086372.1 Protein Homology CDS 4833413 4837003 . + 0 ID=cds-WP_011408321.1;Parent=gene-LNP58_RS22735;Dbxref=Genbank:WP_011408321.1;Name=WP_011408321.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902404.1;locus_tag=LNP58_RS22735;product=DNA polymerase III subunit alpha;protein_id=WP_011408321.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4837179 4838138 . + . ID=gene-LNP58_RS22740;Name=LNP58_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22740;old_locus_tag=LNP58_22700 NZ_CP086372.1 Protein Homology CDS 4837179 4838138 . + 0 ID=cds-WP_011258685.1;Parent=gene-LNP58_RS22740;Dbxref=Genbank:WP_011258685.1;Name=WP_011258685.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258685.1;locus_tag=LNP58_RS22740;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_011258685.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4838249 4838699 . - . ID=gene-LNP58_RS22745;Name=LNP58_RS22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22745;old_locus_tag=LNP58_22705;partial=true;pseudo=true;start_range=.,4838249 NZ_CP086372.1 Protein Homology CDS 4838249 4838699 . - 0 ID=cds-LNP58_RS22745;Parent=gene-LNP58_RS22745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS22745;partial=true;product=transposase;pseudo=true;start_range=.,4838249;transl_table=11 NZ_CP086372.1 RefSeq gene 4839008 4841158 . + . ID=gene-LNP58_RS22750;Name=LNP58_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22750;old_locus_tag=LNP58_22710 NZ_CP086372.1 Protein Homology CDS 4839008 4841158 . + 0 ID=cds-WP_228329628.1;Parent=gene-LNP58_RS22750;Dbxref=Genbank:WP_228329628.1;Name=WP_228329628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445192.1;locus_tag=LNP58_RS22750;product=TonB-dependent receptor;protein_id=WP_228329628.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4841158 4841895 . + . ID=gene-LNP58_RS22755;Name=LNP58_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22755;old_locus_tag=LNP58_22715 NZ_CP086372.1 Protein Homology CDS 4841158 4841895 . + 0 ID=cds-WP_011258682.1;Parent=gene-LNP58_RS22755;Dbxref=Genbank:WP_011258682.1;Name=WP_011258682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258682.1;locus_tag=LNP58_RS22755;product=ABC transporter ATP-binding protein;protein_id=WP_011258682.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4841892 4843304 . + . ID=gene-LNP58_RS22760;Name=LNP58_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22760;old_locus_tag=LNP58_22720 NZ_CP086372.1 Protein Homology CDS 4841892 4843304 . + 0 ID=cds-WP_044756910.1;Parent=gene-LNP58_RS22760;Dbxref=Genbank:WP_044756910.1;Name=WP_044756910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258681.1;locus_tag=LNP58_RS22760;product=DUF3526 domain-containing protein;protein_id=WP_044756910.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4843367 4844074 . + . ID=gene-LNP58_RS22765;Name=LNP58_RS22765;end_range=4844074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22765;old_locus_tag=LNP58_22725;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4843367 4844074 . + 0 ID=cds-LNP58_RS22765;Parent=gene-LNP58_RS22765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4844074,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024091.2;locus_tag=LNP58_RS22765;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4844141 4845055 . + . ID=gene-LNP58_RS22770;Name=LNP58_RS22770;end_range=4845055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22770;old_locus_tag=LNP58_22730;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4844141 4845055 . + 0 ID=cds-LNP58_RS22770;Parent=gene-LNP58_RS22770;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4845055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408129.1;locus_tag=LNP58_RS22770;partial=true;product=DUF3526 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4845406 4845672 . + . ID=gene-LNP58_RS22775;Name=LNP58_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22775;old_locus_tag=LNP58_22735 NZ_CP086372.1 GeneMarkS-2+ CDS 4845406 4845672 . + 0 ID=cds-WP_012445196.1;Parent=gene-LNP58_RS22775;Dbxref=Genbank:WP_012445196.1;Name=WP_012445196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS22775;product=hypothetical protein;protein_id=WP_012445196.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4845750 4846196 . - . ID=gene-LNP58_RS22780;Name=LNP58_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22780;old_locus_tag=LNP58_22740 NZ_CP086372.1 Protein Homology CDS 4845750 4846196 . - 0 ID=cds-WP_011408317.1;Parent=gene-LNP58_RS22780;Dbxref=Genbank:WP_011408317.1;Name=WP_011408317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902407.1;locus_tag=LNP58_RS22780;product=CopD family protein;protein_id=WP_011408317.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4846270 4846872 . + . ID=gene-LNP58_RS22785;Name=LNP58_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22785;old_locus_tag=LNP58_22745 NZ_CP086372.1 Protein Homology CDS 4846270 4846872 . + 0 ID=cds-WP_011408316.1;Parent=gene-LNP58_RS22785;Dbxref=Genbank:WP_011408316.1;Name=WP_011408316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258678.1;locus_tag=LNP58_RS22785;product=class I SAM-dependent methyltransferase;protein_id=WP_011408316.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4847013 4848356 . + . ID=gene-LNP58_RS22790;Name=LNP58_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22790;old_locus_tag=LNP58_22750 NZ_CP086372.1 Protein Homology CDS 4847013 4848356 . + 0 ID=cds-WP_012445197.1;Parent=gene-LNP58_RS22790;Dbxref=Genbank:WP_012445197.1;Name=WP_012445197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472356.1;locus_tag=LNP58_RS22790;product=polyhydroxyalkanoate depolymerase;protein_id=WP_012445197.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4848424 4848500 . + . ID=gene-LNP58_RS22795;Name=LNP58_RS22795;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22795;old_locus_tag=LNP58_22755 NZ_CP086372.1 cmsearch ncRNA 4848424 4848500 . + . ID=rna-LNP58_RS22795;Parent=gene-LNP58_RS22795;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22795;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4848424 4848500 . + . ID=exon-LNP58_RS22795-1;Parent=rna-LNP58_RS22795;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22795;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 4848823 4849299 . + . ID=gene-LNP58_RS22800;Name=LNP58_RS22800;end_range=4849299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22800;old_locus_tag=LNP58_22760;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4848823 4849299 . + 0 ID=cds-LNP58_RS22800;Parent=gene-LNP58_RS22800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4849299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904273.1;locus_tag=LNP58_RS22800;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4849411 4849851 . + . ID=gene-LNP58_RS22805;Name=LNP58_RS22805;end_range=4849851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22805;old_locus_tag=LNP58_22765;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4849411 4849851 . + 0 ID=cds-LNP58_RS22805;Parent=gene-LNP58_RS22805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4849851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS22805;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4849858 4850824 . - . ID=gene-LNP58_RS22810;Name=LNP58_RS22810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22810;old_locus_tag=LNP58_22770;pseudo=true NZ_CP086372.1 Protein Homology CDS 4849858 4850824 . - 0 ID=cds-LNP58_RS22810;Parent=gene-LNP58_RS22810;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=LNP58_RS22810;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4850913 4851959 . + . ID=gene-LNP58_RS22815;Name=LNP58_RS22815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22815;old_locus_tag=LNP58_22775;partial=true;pseudo=true;start_range=.,4850913 NZ_CP086372.1 Protein Homology CDS 4850913 4851959 . + 0 ID=cds-LNP58_RS22815;Parent=gene-LNP58_RS22815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS22815;partial=true;product=IS5-like element ISXoo5 family transposase;pseudo=true;start_range=.,4850913;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4851972 4852952 . + . ID=gene-LNP58_RS22820;Name=cysC;end_range=4852952,.;gbkey=Gene;gene=cysC;gene_biotype=pseudogene;locus_tag=LNP58_RS22820;old_locus_tag=LNP58_22780;partial=true;pseudo=true;start_range=.,4851972 NZ_CP086372.1 Protein Homology CDS 4851972 4852952 . + 0 ID=cds-LNP58_RS22820;Parent=gene-LNP58_RS22820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006790,GO:0004020;end_range=4852952,.;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167870.1;locus_tag=LNP58_RS22820;partial=true;product=adenylyl-sulfate kinase;pseudo=true;start_range=.,4851972;transl_table=11 NZ_CP086372.1 RefSeq gene 4853144 4853257 . + . ID=gene-LNP58_RS22825;Name=LNP58_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22825;old_locus_tag=LNP58_22785 NZ_CP086372.1 Protein Homology CDS 4853144 4853257 . + 0 ID=cds-WP_229001950.1;Parent=gene-LNP58_RS22825;Dbxref=Genbank:WP_229001950.1;Name=WP_229001950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013730.2;locus_tag=LNP58_RS22825;product=hypothetical protein;protein_id=WP_229001950.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4853271 4853687 . - . ID=gene-LNP58_RS22830;Name=LNP58_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22830;old_locus_tag=LNP58_22790 NZ_CP086372.1 GeneMarkS-2+ CDS 4853271 4853687 . - 0 ID=cds-WP_011408313.1;Parent=gene-LNP58_RS22830;Dbxref=Genbank:WP_011408313.1;Name=WP_011408313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS22830;product=hypothetical protein;protein_id=WP_011408313.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4854486 4855961 . + . ID=gene-LNP58_RS22835;Name=LNP58_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22835;old_locus_tag=LNP58_22795 NZ_CP086372.1 Protein Homology CDS 4854486 4855961 . + 0 ID=cds-WP_069959817.1;Parent=gene-LNP58_RS22835;Dbxref=Genbank:WP_069959817.1;Name=WP_069959817.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=LNP58_RS22835;product=IS5-like element ISXoo5 family transposase;protein_id=WP_069959817.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4856004 4856399 . + . ID=gene-LNP58_RS22840;Name=LNP58_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22840;old_locus_tag=LNP58_22800 NZ_CP086372.1 Protein Homology CDS 4856004 4856399 . + 0 ID=cds-WP_011408311.1;Parent=gene-LNP58_RS22840;Dbxref=Genbank:WP_011408311.1;Name=WP_011408311.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408311.1;locus_tag=LNP58_RS22840;product=SymE family type I addiction module toxin;protein_id=WP_011408311.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4856439 4857815 . - . ID=gene-LNP58_RS22845;Name=LNP58_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22845;old_locus_tag=LNP58_22805 NZ_CP086372.1 Protein Homology CDS 4856439 4857815 . - 0 ID=cds-WP_082323429.1;Parent=gene-LNP58_RS22845;Dbxref=Genbank:WP_082323429.1;Name=WP_082323429.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=LNP58_RS22845;product=IS5 family transposase;protein_id=WP_082323429.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4857973 4859212 . - . ID=gene-LNP58_RS22850;Name=LNP58_RS22850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22850;old_locus_tag=LNP58_22810;partial=true;pseudo=true;start_range=.,4857973 NZ_CP086372.1 Protein Homology CDS 4857973 4859212 . - 0 ID=cds-LNP58_RS22850;Parent=gene-LNP58_RS22850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113001.1;locus_tag=LNP58_RS22850;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4857973;transl_table=11 NZ_CP086372.1 RefSeq gene 4859446 4860120 . + . ID=gene-LNP58_RS22855;Name=LNP58_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22855;old_locus_tag=LNP58_22815 NZ_CP086372.1 Protein Homology CDS 4859446 4860120 . + 0 ID=cds-WP_011258670.1;Parent=gene-LNP58_RS22855;Dbxref=Genbank:WP_011258670.1;Name=WP_011258670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380413.1;locus_tag=LNP58_RS22855;product=DUF502 domain-containing protein;protein_id=WP_011258670.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4860125 4860901 . + . ID=gene-LNP58_RS22860;Name=LNP58_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22860;old_locus_tag=LNP58_22820 NZ_CP086372.1 Protein Homology CDS 4860125 4860901 . + 0 ID=cds-WP_011258669.1;Parent=gene-LNP58_RS22860;Dbxref=Genbank:WP_011258669.1;Name=WP_011258669.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155671.1;locus_tag=LNP58_RS22860;product=queuosine precursor transporter;protein_id=WP_011258669.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4860964 4861040 . + . ID=gene-LNP58_RS22865;Name=LNP58_RS22865;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22865;old_locus_tag=LNP58_22825 NZ_CP086372.1 cmsearch ncRNA 4860964 4861040 . + . ID=rna-LNP58_RS22865;Parent=gene-LNP58_RS22865;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22865;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4860964 4861040 . + . ID=exon-LNP58_RS22865-1;Parent=rna-LNP58_RS22865;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22865;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4861322 4863259 . + . ID=gene-LNP58_RS22870;Name=LNP58_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22870;old_locus_tag=LNP58_22830 NZ_CP086372.1 Protein Homology CDS 4861322 4863259 . + 0 ID=cds-WP_069959816.1;Parent=gene-LNP58_RS22870;Dbxref=Genbank:WP_069959816.1;Name=WP_069959816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346878.1;locus_tag=LNP58_RS22870;product=DUF885 family protein;protein_id=WP_069959816.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4863441 4864418 . - . ID=gene-LNP58_RS22875;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=LNP58_RS22875;old_locus_tag=LNP58_22835 NZ_CP086372.1 Protein Homology CDS 4863441 4864418 . - 0 ID=cds-WP_011408306.1;Parent=gene-LNP58_RS22875;Dbxref=Genbank:WP_011408306.1;Name=WP_011408306.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258667.1;locus_tag=LNP58_RS22875;product=homocysteine S-methyltransferase;protein_id=WP_011408306.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4864415 4865812 . - . ID=gene-LNP58_RS22880;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=LNP58_RS22880;old_locus_tag=LNP58_22840 NZ_CP086372.1 Protein Homology CDS 4864415 4865812 . - 0 ID=cds-WP_011408305.1;Parent=gene-LNP58_RS22880;Dbxref=Genbank:WP_011408305.1;Name=WP_011408305.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965585.1;locus_tag=LNP58_RS22880;product=S-methylmethionine permease;protein_id=WP_011408305.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4866083 4867141 . - . ID=gene-LNP58_RS22885;Name=LNP58_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22885;old_locus_tag=LNP58_22845 NZ_CP086372.1 Protein Homology CDS 4866083 4867141 . - 0 ID=cds-WP_011408304.1;Parent=gene-LNP58_RS22885;Dbxref=Genbank:WP_011408304.1;Name=WP_011408304.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408304.1;locus_tag=LNP58_RS22885;product=IS630 family transposase;protein_id=WP_011408304.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4867263 4867651 . + . ID=gene-LNP58_RS22890;Name=LNP58_RS22890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22890;old_locus_tag=LNP58_22850;pseudo=true NZ_CP086372.1 Protein Homology CDS 4867263 4867651 . + 0 ID=cds-LNP58_RS22890;Parent=gene-LNP58_RS22890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159538.1;locus_tag=LNP58_RS22890;product=VOC family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4867905 4868354 . + . ID=gene-LNP58_RS22895;Name=LNP58_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22895;old_locus_tag=LNP58_22855 NZ_CP086372.1 Protein Homology CDS 4867905 4868354 . + 0 ID=cds-WP_011408302.1;Parent=gene-LNP58_RS22895;Dbxref=Genbank:WP_011408302.1;Name=WP_011408302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237831.1;locus_tag=LNP58_RS22895;product=DUF2147 domain-containing protein;protein_id=WP_011408302.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4868579 4870663 . + . ID=gene-LNP58_RS22900;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LNP58_RS22900;old_locus_tag=LNP58_22860 NZ_CP086372.1 Protein Homology CDS 4868579 4870663 . + 0 ID=cds-WP_011258663.1;Parent=gene-LNP58_RS22900;Dbxref=Genbank:WP_011258663.1;Name=WP_011258663.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304414.1;locus_tag=LNP58_RS22900;product=methionine--tRNA ligase;protein_id=WP_011258663.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4870871 4871467 . + . ID=gene-LNP58_RS22905;Name=LNP58_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22905;old_locus_tag=LNP58_22865 NZ_CP086372.1 Protein Homology CDS 4870871 4871467 . + 0 ID=cds-WP_041182084.1;Parent=gene-LNP58_RS22905;Dbxref=Genbank:WP_041182084.1;Name=WP_041182084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462990.1;locus_tag=LNP58_RS22905;product=HAD-IB family hydrolase;protein_id=WP_041182084.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4871469 4871897 . + . ID=gene-LNP58_RS22910;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=LNP58_RS22910;old_locus_tag=LNP58_22870 NZ_CP086372.1 Protein Homology CDS 4871469 4871897 . + 0 ID=cds-WP_011408301.1;Parent=gene-LNP58_RS22910;Dbxref=Genbank:WP_011408301.1;Name=WP_011408301.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113004.1;locus_tag=LNP58_RS22910;product=Rnf electron transport complex subunit RnfB;protein_id=WP_011408301.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4872516 4873298 . + . ID=gene-LNP58_RS22915;Name=LNP58_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22915;old_locus_tag=LNP58_22875 NZ_CP086372.1 Protein Homology CDS 4872516 4873298 . + 0 ID=cds-WP_042464748.1;Parent=gene-LNP58_RS22915;Dbxref=Genbank:WP_042464748.1;Name=WP_042464748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258660.1;locus_tag=LNP58_RS22915;product=hypothetical protein;protein_id=WP_042464748.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4873384 4873752 . + . ID=gene-LNP58_RS22920;Name=LNP58_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22920;old_locus_tag=LNP58_22880 NZ_CP086372.1 Protein Homology CDS 4873384 4873752 . + 0 ID=cds-WP_012445216.1;Parent=gene-LNP58_RS22920;Dbxref=Genbank:WP_012445216.1;Name=WP_012445216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366091.1;locus_tag=LNP58_RS22920;product=hypothetical protein;protein_id=WP_012445216.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4873811 4874374 . + . ID=gene-LNP58_RS22925;Name=LNP58_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22925;old_locus_tag=LNP58_22885 NZ_CP086372.1 Protein Homology CDS 4873811 4874374 . + 0 ID=cds-WP_011258659.1;Parent=gene-LNP58_RS22925;Dbxref=Genbank:WP_011258659.1;Name=WP_011258659.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993590.1;locus_tag=LNP58_RS22925;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011258659.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4874371 4875204 . + . ID=gene-LNP58_RS22930;Name=LNP58_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22930;old_locus_tag=LNP58_22890 NZ_CP086372.1 Protein Homology CDS 4874371 4875204 . + 0 ID=cds-WP_012445217.1;Parent=gene-LNP58_RS22930;Dbxref=Genbank:WP_012445217.1;Name=WP_012445217.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485441.1;locus_tag=LNP58_RS22930;product=anti-sigma factor;protein_id=WP_012445217.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4875432 4876430 . + . ID=gene-LNP58_RS22935;Name=LNP58_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22935;old_locus_tag=LNP58_22895 NZ_CP086372.1 Protein Homology CDS 4875432 4876430 . + 0 ID=cds-WP_011408297.1;Parent=gene-LNP58_RS22935;Dbxref=Genbank:WP_011408297.1;Name=WP_011408297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166055.1;locus_tag=LNP58_RS22935;product=acyl-CoA desaturase;protein_id=WP_011408297.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4876427 4877677 . + . ID=gene-LNP58_RS22940;Name=LNP58_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22940;old_locus_tag=LNP58_22900 NZ_CP086372.1 Protein Homology CDS 4876427 4877677 . + 0 ID=cds-WP_011408296.1;Parent=gene-LNP58_RS22940;Dbxref=Genbank:WP_011408296.1;Name=WP_011408296.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155653.1;locus_tag=LNP58_RS22940;product=FAD-dependent oxidoreductase;protein_id=WP_011408296.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4877677 4878561 . + . ID=gene-LNP58_RS22945;Name=LNP58_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22945;old_locus_tag=LNP58_22905 NZ_CP086372.1 Protein Homology CDS 4877677 4878561 . + 0 ID=cds-WP_011408295.1;Parent=gene-LNP58_RS22945;Dbxref=Genbank:WP_011408295.1;Name=WP_011408295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485446.1;locus_tag=LNP58_RS22945;product=DUF1365 domain-containing protein;protein_id=WP_011408295.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4878558 4879853 . + . ID=gene-LNP58_RS22950;Name=LNP58_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22950;old_locus_tag=LNP58_22910 NZ_CP086372.1 Protein Homology CDS 4878558 4879853 . + 0 ID=cds-WP_011408294.1;Parent=gene-LNP58_RS22950;Dbxref=Genbank:WP_011408294.1;Name=WP_011408294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380444.1;locus_tag=LNP58_RS22950;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_011408294.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4879850 4880395 . + . ID=gene-LNP58_RS22955;Name=LNP58_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22955;old_locus_tag=LNP58_22915 NZ_CP086372.1 Protein Homology CDS 4879850 4880395 . + 0 ID=cds-WP_011408293.1;Parent=gene-LNP58_RS22955;Dbxref=Genbank:WP_011408293.1;Name=WP_011408293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451779.1;locus_tag=LNP58_RS22955;product=DUF2878 domain-containing protein;protein_id=WP_011408293.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4880392 4881174 . + . ID=gene-LNP58_RS22960;Name=LNP58_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22960;old_locus_tag=LNP58_22920 NZ_CP086372.1 Protein Homology CDS 4880392 4881174 . + 0 ID=cds-WP_011408292.1;Parent=gene-LNP58_RS22960;Dbxref=Genbank:WP_011408292.1;Name=WP_011408292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967316.1;locus_tag=LNP58_RS22960;product=DUF1295 domain-containing protein;protein_id=WP_011408292.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4881192 4882262 . + . ID=gene-LNP58_RS22965;Name=LNP58_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22965;old_locus_tag=LNP58_22925 NZ_CP086372.1 Protein Homology CDS 4881192 4882262 . + 0 ID=cds-WP_011408291.1;Parent=gene-LNP58_RS22965;Dbxref=Genbank:WP_011408291.1;Name=WP_011408291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924864.1;locus_tag=LNP58_RS22965;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_011408291.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4882424 4882771 . - . ID=gene-LNP58_RS22970;Name=LNP58_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22970;old_locus_tag=LNP58_22930 NZ_CP086372.1 Protein Homology CDS 4882424 4882771 . - 0 ID=cds-WP_011408290.1;Parent=gene-LNP58_RS22970;Dbxref=Genbank:WP_011408290.1;Name=WP_011408290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578235.1;locus_tag=LNP58_RS22970;product=RidA family protein;protein_id=WP_011408290.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4882782 4883683 . - . ID=gene-LNP58_RS22975;Name=LNP58_RS22975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS22975;old_locus_tag=LNP58_22935;pseudo=true NZ_CP086372.1 Protein Homology CDS 4882782 4883683 . - 0 ID=cds-LNP58_RS22975;Parent=gene-LNP58_RS22975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850265.1;locus_tag=LNP58_RS22975;product=DUF998 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4883752 4886316 . + . ID=gene-LNP58_RS22980;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LNP58_RS22980;old_locus_tag=LNP58_22940 NZ_CP086372.1 Protein Homology CDS 4883752 4886316 . + 0 ID=cds-WP_011408287.1;Parent=gene-LNP58_RS22980;Dbxref=Genbank:WP_011408287.1;Name=WP_011408287.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485461.1;locus_tag=LNP58_RS22980;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_011408287.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4886708 4887470 . + . ID=gene-LNP58_RS22985;Name=LNP58_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22985;old_locus_tag=LNP58_22945 NZ_CP086372.1 Protein Homology CDS 4886708 4887027 . + 0 ID=cds-WP_109181916.1;Parent=gene-LNP58_RS22985;Dbxref=Genbank:WP_109181916.1;Name=WP_109181916.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS22985;product=IS5 family transposase;protein_id=WP_109181916.1;transl_table=11 NZ_CP086372.1 Protein Homology CDS 4887026 4887470 . + 1 ID=cds-WP_109181916.1;Parent=gene-LNP58_RS22985;Dbxref=Genbank:WP_109181916.1;Name=WP_109181916.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LNP58_RS22985;product=IS5 family transposase;protein_id=WP_109181916.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4887485 4887561 . - . ID=gene-LNP58_RS22990;Name=LNP58_RS22990;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS22990;old_locus_tag=LNP58_22950 NZ_CP086372.1 cmsearch ncRNA 4887485 4887561 . - . ID=rna-LNP58_RS22990;Parent=gene-LNP58_RS22990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22990;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4887485 4887561 . - . ID=exon-LNP58_RS22990-1;Parent=rna-LNP58_RS22990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS22990;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4887755 4889125 . - . ID=gene-LNP58_RS22995;Name=LNP58_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS22995;old_locus_tag=LNP58_22955 NZ_CP086372.1 Protein Homology CDS 4887755 4889125 . - 0 ID=cds-WP_011408285.1;Parent=gene-LNP58_RS22995;Dbxref=Genbank:WP_011408285.1;Name=WP_011408285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258647.1;locus_tag=LNP58_RS22995;product=virulence factor family protein;protein_id=WP_011408285.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4889195 4889389 . - . ID=gene-LNP58_RS23000;Name=LNP58_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23000;old_locus_tag=LNP58_22960 NZ_CP086372.1 Protein Homology CDS 4889195 4889389 . - 0 ID=cds-WP_011258646.1;Parent=gene-LNP58_RS23000;Dbxref=Genbank:WP_011258646.1;Name=WP_011258646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155644.1;locus_tag=LNP58_RS23000;product=hypothetical protein;protein_id=WP_011258646.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4889449 4890057 . - . ID=gene-LNP58_RS23005;Name=LNP58_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23005;old_locus_tag=LNP58_22965 NZ_CP086372.1 Protein Homology CDS 4889449 4890057 . - 0 ID=cds-WP_011258645.1;Parent=gene-LNP58_RS23005;Dbxref=Genbank:WP_011258645.1;Name=WP_011258645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503972.1;locus_tag=LNP58_RS23005;product=hypothetical protein;protein_id=WP_011258645.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4890093 4890695 . - . ID=gene-LNP58_RS23010;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LNP58_RS23010;old_locus_tag=LNP58_22970 NZ_CP086372.1 Protein Homology CDS 4890093 4890695 . - 0 ID=cds-WP_011408284.1;Parent=gene-LNP58_RS23010;Dbxref=Genbank:WP_011408284.1;Name=WP_011408284.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408284.1;locus_tag=LNP58_RS23010;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_011408284.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4890969 4891424 . - . ID=gene-LNP58_RS23015;Name=LNP58_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23015;old_locus_tag=LNP58_22975 NZ_CP086372.1 Protein Homology CDS 4890969 4891424 . - 0 ID=cds-WP_011258643.1;Parent=gene-LNP58_RS23015;Dbxref=Genbank:WP_011258643.1;Name=WP_011258643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303138.1;locus_tag=LNP58_RS23015;product=PA2169 family four-helix-bundle protein;protein_id=WP_011258643.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4891666 4892880 . - . ID=gene-LNP58_RS23020;Name=LNP58_RS23020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23020;old_locus_tag=LNP58_22980;pseudo=true NZ_CP086372.1 Protein Homology CDS 4891666 4892880 . - 0 ID=cds-LNP58_RS23020;Parent=gene-LNP58_RS23020;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS23020;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4893347 4894558 . - . ID=gene-LNP58_RS23025;Name=LNP58_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23025;old_locus_tag=LNP58_22985 NZ_CP086372.1 Protein Homology CDS 4893347 4894558 . - 0 ID=cds-WP_011258642.1;Parent=gene-LNP58_RS23025;Dbxref=Genbank:WP_011258642.1;Name=WP_011258642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159530.1;locus_tag=LNP58_RS23025;product=MFS transporter;protein_id=WP_011258642.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4894779 4895897 . + . ID=gene-LNP58_RS23030;Name=LNP58_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23030;old_locus_tag=LNP58_22990 NZ_CP086372.1 Protein Homology CDS 4894779 4895897 . + 0 ID=cds-WP_011408282.1;Parent=gene-LNP58_RS23030;Dbxref=Genbank:WP_011408282.1;Name=WP_011408282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155638.1;locus_tag=LNP58_RS23030;product=alkene reductase;protein_id=WP_011408282.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4896305 4897078 . + . ID=gene-LNP58_RS23035;Name=LNP58_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23035;old_locus_tag=LNP58_22995 NZ_CP086372.1 Protein Homology CDS 4896305 4897078 . + 0 ID=cds-WP_228329745.1;Parent=gene-LNP58_RS23035;Dbxref=Genbank:WP_228329745.1;Name=WP_228329745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997089.1;locus_tag=LNP58_RS23035;product=hypothetical protein;protein_id=WP_228329745.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4897367 4897702 . - . ID=gene-LNP58_RS23040;Name=LNP58_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23040;old_locus_tag=LNP58_23000 NZ_CP086372.1 Protein Homology CDS 4897367 4897702 . - 0 ID=cds-WP_011408280.1;Parent=gene-LNP58_RS23040;Dbxref=Genbank:WP_011408280.1;Name=WP_011408280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489493.1;locus_tag=LNP58_RS23040;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_011408280.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4897817 4898866 . + . ID=gene-LNP58_RS23045;Name=LNP58_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23045;old_locus_tag=LNP58_23005 NZ_CP086372.1 Protein Homology CDS 4897817 4898866 . + 0 ID=cds-WP_011408279.1;Parent=gene-LNP58_RS23045;Dbxref=Genbank:WP_011408279.1;Name=WP_011408279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113013.1;locus_tag=LNP58_RS23045;product=cation diffusion facilitator family transporter;protein_id=WP_011408279.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4899114 4900362 . + . ID=gene-LNP58_RS23050;Name=LNP58_RS23050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23050;old_locus_tag=LNP58_23010;pseudo=true NZ_CP086372.1 Protein Homology CDS 4899114 4900362 . + 0 ID=cds-LNP58_RS23050;Parent=gene-LNP58_RS23050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS23050;product=ISL3-like element ISXoo13 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4900538 4901011 . + . ID=gene-LNP58_RS23055;Name=LNP58_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23055;old_locus_tag=LNP58_23015 NZ_CP086372.1 Protein Homology CDS 4900538 4901011 . + 0 ID=cds-WP_011408277.1;Parent=gene-LNP58_RS23055;Dbxref=Genbank:WP_011408277.1;Name=WP_011408277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578221.1;locus_tag=LNP58_RS23055;product=peptidylprolyl isomerase;protein_id=WP_011408277.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4901151 4902527 . + . ID=gene-LNP58_RS23060;Name=LNP58_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23060;old_locus_tag=LNP58_23020 NZ_CP086372.1 Protein Homology CDS 4901151 4902527 . + 0 ID=cds-WP_012445232.1;Parent=gene-LNP58_RS23060;Dbxref=Genbank:WP_012445232.1;Name=WP_012445232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503984.1;locus_tag=LNP58_RS23060;product=Hsp70 family protein;protein_id=WP_012445232.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4902717 4902902 . + . ID=gene-LNP58_RS23065;Name=LNP58_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23065;old_locus_tag=LNP58_23025 NZ_CP086372.1 Protein Homology CDS 4902717 4902902 . + 0 ID=cds-WP_011258635.1;Parent=gene-LNP58_RS23065;Dbxref=Genbank:WP_011258635.1;Name=WP_011258635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155632.1;locus_tag=LNP58_RS23065;product=hypothetical protein;protein_id=WP_011258635.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4903079 4903155 . - . ID=gene-LNP58_RS23070;Name=LNP58_RS23070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS23070;old_locus_tag=LNP58_23030 NZ_CP086372.1 cmsearch ncRNA 4903079 4903155 . - . ID=rna-LNP58_RS23070;Parent=gene-LNP58_RS23070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23070;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4903079 4903155 . - . ID=exon-LNP58_RS23070-1;Parent=rna-LNP58_RS23070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23070;product=sX9 sRNA NZ_CP086372.1 RefSeq gene 4903295 4904614 . - . ID=gene-LNP58_RS23075;Name=LNP58_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23075;old_locus_tag=LNP58_23035 NZ_CP086372.1 Protein Homology CDS 4903295 4904614 . - 0 ID=cds-WP_109181915.1-2;Parent=gene-LNP58_RS23075;Dbxref=Genbank:WP_109181915.1;Name=WP_109181915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=LNP58_RS23075;product=IS701-like element ISXo15 family transposase;protein_id=WP_109181915.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4904703 4905917 . - . ID=gene-LNP58_RS23080;Name=LNP58_RS23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23080;old_locus_tag=LNP58_23040;pseudo=true NZ_CP086372.1 Protein Homology CDS 4904703 4905917 . - 0 ID=cds-LNP58_RS23080;Parent=gene-LNP58_RS23080;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=LNP58_RS23080;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4906102 4906668 . + . ID=gene-LNP58_RS23085;Name=LNP58_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23085;old_locus_tag=LNP58_23045 NZ_CP086372.1 Protein Homology CDS 4906102 4906668 . + 0 ID=cds-WP_041182418.1;Parent=gene-LNP58_RS23085;Dbxref=Genbank:WP_041182418.1;Name=WP_041182418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967347.1;locus_tag=LNP58_RS23085;product=mechanosensitive ion channel family protein;protein_id=WP_041182418.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4906859 4907125 . - . ID=gene-LNP58_RS23090;Name=LNP58_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23090;old_locus_tag=LNP58_23050 NZ_CP086372.1 Protein Homology CDS 4906859 4907125 . - 0 ID=cds-WP_011258631.1;Parent=gene-LNP58_RS23090;Dbxref=Genbank:WP_011258631.1;Name=WP_011258631.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452846.1;locus_tag=LNP58_RS23090;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_011258631.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4907300 4907554 . + . ID=gene-LNP58_RS23095;Name=LNP58_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23095;old_locus_tag=LNP58_23055 NZ_CP086372.1 Protein Homology CDS 4907300 4907554 . + 0 ID=cds-WP_011258630.1;Parent=gene-LNP58_RS23095;Dbxref=Genbank:WP_011258630.1;Name=WP_011258630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990927.1;locus_tag=LNP58_RS23095;product=DUF2789 domain-containing protein;protein_id=WP_011258630.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4907715 4907888 . - . ID=gene-LNP58_RS23100;Name=LNP58_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23100;old_locus_tag=LNP58_23060 NZ_CP086372.1 Protein Homology CDS 4907715 4907888 . - 0 ID=cds-WP_011258629.1;Parent=gene-LNP58_RS23100;Dbxref=Genbank:WP_011258629.1;Name=WP_011258629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258629.1;locus_tag=LNP58_RS23100;product=DUF1328 domain-containing protein;protein_id=WP_011258629.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4908209 4908817 . + . ID=gene-LNP58_RS23105;Name=LNP58_RS23105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23105;old_locus_tag=LNP58_23065;pseudo=true NZ_CP086372.1 Protein Homology CDS 4908209 4908817 . + 0 ID=cds-LNP58_RS23105;Parent=gene-LNP58_RS23105;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967352.1;locus_tag=LNP58_RS23105;product=DUF45 domain-containing protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4908976 4909052 . + . ID=gene-LNP58_RS23110;Name=LNP58_RS23110;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS23110;old_locus_tag=LNP58_23070 NZ_CP086372.1 cmsearch ncRNA 4908976 4909052 . + . ID=rna-LNP58_RS23110;Parent=gene-LNP58_RS23110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23110;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4908976 4909052 . + . ID=exon-LNP58_RS23110-1;Parent=rna-LNP58_RS23110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23110;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 4909057 4909128 . + . ID=gene-LNP58_RS23115;Name=LNP58_RS23115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23115;old_locus_tag=LNP58_23075;partial=true;pseudo=true;start_range=.,4909057 NZ_CP086372.1 Protein Homology CDS 4909057 4909128 . + 0 ID=cds-LNP58_RS23115;Parent=gene-LNP58_RS23115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116735.1;locus_tag=LNP58_RS23115;partial=true;product=2OG-Fe(II) oxygenase superfamily protein;pseudo=true;start_range=.,4909057;transl_table=11 NZ_CP086372.1 RefSeq gene 4909286 4910386 . + . ID=gene-LNP58_RS23120;Name=LNP58_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23120;old_locus_tag=LNP58_23080 NZ_CP086372.1 Protein Homology CDS 4909286 4910386 . + 0 ID=cds-WP_011258627.1;Parent=gene-LNP58_RS23120;Dbxref=Genbank:WP_011258627.1;Name=WP_011258627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155625.1;locus_tag=LNP58_RS23120;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_011258627.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4910447 4913275 . - . ID=gene-LNP58_RS23125;Name=LNP58_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23125;old_locus_tag=LNP58_23085 NZ_CP086372.1 Protein Homology CDS 4910447 4913275 . - 0 ID=cds-WP_011258626.1;Parent=gene-LNP58_RS23125;Dbxref=Genbank:WP_011258626.1;Name=WP_011258626.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911624.1;locus_tag=LNP58_RS23125;product=autotransporter serine protease;protein_id=WP_011258626.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4913431 4914606 . + . ID=gene-LNP58_RS23130;Name=LNP58_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23130;old_locus_tag=LNP58_23090 NZ_CP086372.1 Protein Homology CDS 4913431 4914606 . + 0 ID=cds-WP_011408270.1;Parent=gene-LNP58_RS23130;Dbxref=Genbank:WP_011408270.1;Name=WP_011408270.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911622.1;locus_tag=LNP58_RS23130;product=acetyl-CoA C-acyltransferase;protein_id=WP_011408270.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4914729 4915073 . + . ID=gene-LNP58_RS23135;Name=LNP58_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23135;old_locus_tag=LNP58_23095 NZ_CP086372.1 Protein Homology CDS 4914729 4915073 . + 0 ID=cds-WP_011408269.1;Parent=gene-LNP58_RS23135;Dbxref=Genbank:WP_011408269.1;Name=WP_011408269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269920.1;locus_tag=LNP58_RS23135;product=hypothetical protein;protein_id=WP_011408269.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4915303 4915629 . + . ID=gene-LNP58_RS23140;Name=LNP58_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23140;old_locus_tag=LNP58_23100 NZ_CP086372.1 Protein Homology CDS 4915303 4915629 . + 0 ID=cds-WP_011258624.1;Parent=gene-LNP58_RS23140;Dbxref=Genbank:WP_011258624.1;Name=WP_011258624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921547.1;locus_tag=LNP58_RS23140;product=hypothetical protein;protein_id=WP_011258624.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4915738 4917447 . + . ID=gene-LNP58_RS23145;Name=LNP58_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23145;old_locus_tag=LNP58_23105 NZ_CP086372.1 Protein Homology CDS 4915738 4917447 . + 0 ID=cds-WP_011408268.1;Parent=gene-LNP58_RS23145;Dbxref=Genbank:WP_011408268.1;Name=WP_011408268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408268.1;locus_tag=LNP58_RS23145;product=GGDEF domain-containing protein;protein_id=WP_011408268.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4917545 4918135 . + . ID=gene-LNP58_RS23150;Name=LNP58_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23150;old_locus_tag=LNP58_23110 NZ_CP086372.1 Protein Homology CDS 4917545 4918135 . + 0 ID=cds-WP_011408267.1;Parent=gene-LNP58_RS23150;Dbxref=Genbank:WP_011408267.1;Name=WP_011408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504002.1;locus_tag=LNP58_RS23150;product=polymer-forming cytoskeletal protein;protein_id=WP_011408267.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4918132 4918497 . + . ID=gene-LNP58_RS23155;Name=LNP58_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23155;old_locus_tag=LNP58_23115 NZ_CP086372.1 Protein Homology CDS 4918132 4918497 . + 0 ID=cds-WP_011258621.1;Parent=gene-LNP58_RS23155;Dbxref=Genbank:WP_011258621.1;Name=WP_011258621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302272.1;locus_tag=LNP58_RS23155;product=hypothetical protein;protein_id=WP_011258621.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4918834 4919856 . + . ID=gene-LNP58_RS23160;Name=LNP58_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23160;old_locus_tag=LNP58_23120 NZ_CP086372.1 Protein Homology CDS 4918834 4919856 . + 0 ID=cds-WP_011408265.1;Parent=gene-LNP58_RS23160;Dbxref=Genbank:WP_011408265.1;Name=WP_011408265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089699.1;locus_tag=LNP58_RS23160;product=ligase-associated DNA damage response exonuclease;protein_id=WP_011408265.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4919853 4920086 . + . ID=gene-LNP58_RS23165;Name=LNP58_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23165;old_locus_tag=LNP58_23125 NZ_CP086372.1 Protein Homology CDS 4919853 4920086 . + 0 ID=cds-WP_011258619.1;Parent=gene-LNP58_RS23165;Dbxref=Genbank:WP_011258619.1;Name=WP_011258619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366000.1;locus_tag=LNP58_RS23165;product=hypothetical protein;protein_id=WP_011258619.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4920083 4921687 . + . ID=gene-LNP58_RS23170;Name=LNP58_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23170;old_locus_tag=LNP58_23130 NZ_CP086372.1 Protein Homology CDS 4920083 4921687 . + 0 ID=cds-WP_011408264.1;Parent=gene-LNP58_RS23170;Dbxref=Genbank:WP_011408264.1;Name=WP_011408264.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300442.1;locus_tag=LNP58_RS23170;product=ATP-dependent DNA ligase;protein_id=WP_011408264.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4921684 4924185 . + . ID=gene-LNP58_RS23175;Name=LNP58_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23175;old_locus_tag=LNP58_23135 NZ_CP086372.1 Protein Homology CDS 4921684 4924185 . + 0 ID=cds-WP_011408263.1;Parent=gene-LNP58_RS23175;Dbxref=Genbank:WP_011408263.1;Name=WP_011408263.1;Ontology_term=GO:0003676,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155617.1;locus_tag=LNP58_RS23175;product=ligase-associated DNA damage response DEXH box helicase;protein_id=WP_011408263.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4924175 4924819 . + . ID=gene-LNP58_RS23180;Name=pdeM;gbkey=Gene;gene=pdeM;gene_biotype=protein_coding;locus_tag=LNP58_RS23180;old_locus_tag=LNP58_23140 NZ_CP086372.1 Protein Homology CDS 4924175 4924819 . + 0 ID=cds-WP_014504008.1;Parent=gene-LNP58_RS23180;Dbxref=Genbank:WP_014504008.1;Name=WP_014504008.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pdeM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924783.1;locus_tag=LNP58_RS23180;product=ligase-associated DNA damage response endonuclease PdeM;protein_id=WP_014504008.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4924861 4924934 . - . ID=gene-LNP58_RS23185;Name=LNP58_RS23185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LNP58_RS23185;old_locus_tag=LNP58_23145 NZ_CP086372.1 cmsearch ncRNA 4924861 4924934 . - . ID=rna-LNP58_RS23185;Parent=gene-LNP58_RS23185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23185;product=sX9 sRNA NZ_CP086372.1 cmsearch exon 4924861 4924934 . - . ID=exon-LNP58_RS23185-1;Parent=rna-LNP58_RS23185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LNP58_RS23185;product=sX9 sRNA NZ_CP086372.1 RefSeq pseudogene 4924994 4925416 . - . ID=gene-LNP58_RS23190;Name=LNP58_RS23190;end_range=4925416,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23190;old_locus_tag=LNP58_23150;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4924994 4925416 . - 0 ID=cds-LNP58_RS23190;Parent=gene-LNP58_RS23190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0071949;end_range=4925416,.;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159522.1;locus_tag=LNP58_RS23190;partial=true;product=FAD-dependent monooxygenase;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq gene 4925420 4925797 . - . ID=gene-LNP58_RS23195;Name=LNP58_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23195;old_locus_tag=LNP58_23155 NZ_CP086372.1 GeneMarkS-2+ CDS 4925420 4925797 . - 0 ID=cds-WP_011408260.1;Parent=gene-LNP58_RS23195;Dbxref=Genbank:WP_011408260.1;Name=WP_011408260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LNP58_RS23195;product=hypothetical protein;protein_id=WP_011408260.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4926005 4926235 . - . ID=gene-LNP58_RS23200;Name=LNP58_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23200;old_locus_tag=LNP58_23160 NZ_CP086372.1 Protein Homology CDS 4926005 4926235 . - 0 ID=cds-WP_011408259.1;Parent=gene-LNP58_RS23200;Dbxref=Genbank:WP_011408259.1;Name=WP_011408259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504011.1;locus_tag=LNP58_RS23200;product=oxidoreductase;protein_id=WP_011408259.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4926330 4926536 . - . ID=gene-LNP58_RS23205;Name=LNP58_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23205;old_locus_tag=LNP58_23165 NZ_CP086372.1 Protein Homology CDS 4926330 4926536 . - 0 ID=cds-WP_003488188.1;Parent=gene-LNP58_RS23205;Dbxref=Genbank:WP_003488188.1;Name=WP_003488188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488188.1;locus_tag=LNP58_RS23205;product=cold-shock protein;protein_id=WP_003488188.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4926623 4927375 . - . ID=gene-LNP58_RS23210;Name=LNP58_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23210;old_locus_tag=LNP58_23170 NZ_CP086372.1 Protein Homology CDS 4926623 4927375 . - 0 ID=cds-WP_011408258.1;Parent=gene-LNP58_RS23210;Dbxref=Genbank:WP_011408258.1;Name=WP_011408258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408258.1;locus_tag=LNP58_RS23210;product=S-methyl-5'-thioinosine phosphorylase;protein_id=WP_011408258.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4927461 4928015 . - . ID=gene-LNP58_RS23215;Name=LNP58_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23215;old_locus_tag=LNP58_23175 NZ_CP086372.1 Protein Homology CDS 4927461 4928015 . - 0 ID=cds-WP_011408257.1;Parent=gene-LNP58_RS23215;Dbxref=Genbank:WP_011408257.1;Name=WP_011408257.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449878.1;locus_tag=LNP58_RS23215;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_011408257.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4928015 4929019 . - . ID=gene-LNP58_RS23220;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LNP58_RS23220;old_locus_tag=LNP58_23180 NZ_CP086372.1 Protein Homology CDS 4928015 4929019 . - 0 ID=cds-WP_011408256.1;Parent=gene-LNP58_RS23220;Dbxref=Genbank:WP_011408256.1;Name=WP_011408256.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303533.1;locus_tag=LNP58_RS23220;product=beta-N-acetylhexosaminidase;protein_id=WP_011408256.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4929137 4930714 . - . ID=gene-LNP58_RS23225;Name=LNP58_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23225;old_locus_tag=LNP58_23185 NZ_CP086372.1 Protein Homology CDS 4929137 4930714 . - 0 ID=cds-WP_011408255.1;Parent=gene-LNP58_RS23225;Dbxref=Genbank:WP_011408255.1;Name=WP_011408255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174064.1;locus_tag=LNP58_RS23225;product=cryptochrome/photolyase family protein;protein_id=WP_011408255.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4930895 4931929 . - . ID=gene-LNP58_RS23230;Name=LNP58_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23230;old_locus_tag=LNP58_23190 NZ_CP086372.1 Protein Homology CDS 4930895 4931929 . - 0 ID=cds-WP_011408254.1;Parent=gene-LNP58_RS23230;Dbxref=Genbank:WP_011408254.1;Name=WP_011408254.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155611.1;locus_tag=LNP58_RS23230;product=FAD-dependent oxidoreductase;protein_id=WP_011408254.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4931946 4932629 . - . ID=gene-LNP58_RS23235;Name=LNP58_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23235;old_locus_tag=LNP58_23195 NZ_CP086372.1 Protein Homology CDS 4931946 4932629 . - 0 ID=cds-WP_075242195.1;Parent=gene-LNP58_RS23235;Dbxref=Genbank:WP_075242195.1;Name=WP_075242195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155610.1;locus_tag=LNP58_RS23235;product=DsbA family oxidoreductase;protein_id=WP_075242195.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4932749 4934125 . - . ID=gene-LNP58_RS23240;Name=LNP58_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23240;old_locus_tag=LNP58_23200 NZ_CP086372.1 Protein Homology CDS 4932749 4934125 . - 0 ID=cds-WP_011408252.1;Parent=gene-LNP58_RS23240;Dbxref=Genbank:WP_011408252.1;Name=WP_011408252.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=LNP58_RS23240;product=IS5-like element ISXo4 family transposase;protein_id=WP_011408252.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4934354 4935589 . + . ID=gene-LNP58_RS23245;Name=LNP58_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23245;old_locus_tag=LNP58_23205 NZ_CP086372.1 Protein Homology CDS 4934354 4935589 . + 0 ID=cds-WP_011257310.1-3;Parent=gene-LNP58_RS23245;Dbxref=Genbank:WP_011257310.1;Name=WP_011257310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=LNP58_RS23245;product=ISL3-like element ISXoo13 family transposase;protein_id=WP_011257310.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4935685 4936182 . - . ID=gene-LNP58_RS23250;Name=LNP58_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23250;old_locus_tag=LNP58_23210 NZ_CP086372.1 Protein Homology CDS 4935685 4936182 . - 0 ID=cds-WP_011258607.1;Parent=gene-LNP58_RS23250;Dbxref=Genbank:WP_011258607.1;Name=WP_011258607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303536.1;locus_tag=LNP58_RS23250;product=CYTH domain-containing protein;protein_id=WP_011258607.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4936357 4937691 . - . ID=gene-LNP58_RS23255;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LNP58_RS23255;old_locus_tag=LNP58_23215 NZ_CP086372.1 Protein Homology CDS 4936357 4937691 . - 0 ID=cds-WP_011408251.1;Parent=gene-LNP58_RS23255;Dbxref=Genbank:WP_011408251.1;Name=WP_011408251.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380519.1;locus_tag=LNP58_RS23255;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_011408251.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4937850 4938572 . + . ID=gene-LNP58_RS23260;Name=LNP58_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23260;old_locus_tag=LNP58_23220 NZ_CP086372.1 Protein Homology CDS 4937850 4938572 . + 0 ID=cds-WP_011408250.1;Parent=gene-LNP58_RS23260;Dbxref=Genbank:WP_011408250.1;Name=WP_011408250.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258605.1;locus_tag=LNP58_RS23260;product=response regulator;protein_id=WP_011408250.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4938721 4939443 . - . ID=gene-LNP58_RS23265;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LNP58_RS23265;old_locus_tag=LNP58_23225 NZ_CP086372.1 Protein Homology CDS 4938721 4939443 . - 0 ID=cds-WP_011258604.1;Parent=gene-LNP58_RS23265;Dbxref=Genbank:WP_011258604.1;Name=WP_011258604.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=LNP58_RS23265;product=DNA repair protein RecO;protein_id=WP_011258604.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4939667 4940566 . - . ID=gene-LNP58_RS23270;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LNP58_RS23270;old_locus_tag=LNP58_23230 NZ_CP086372.1 Protein Homology CDS 4939667 4940566 . - 0 ID=cds-WP_011258603.1;Parent=gene-LNP58_RS23270;Dbxref=Genbank:WP_011258603.1;Name=WP_011258603.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921522.1;locus_tag=LNP58_RS23270;product=GTPase Era;protein_id=WP_011258603.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4940563 4941243 . - . ID=gene-LNP58_RS23275;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LNP58_RS23275;old_locus_tag=LNP58_23235 NZ_CP086372.1 Protein Homology CDS 4940563 4941243 . - 0 ID=cds-WP_011258602.1;Parent=gene-LNP58_RS23275;Dbxref=Genbank:WP_011258602.1;Name=WP_011258602.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445253.1;locus_tag=LNP58_RS23275;product=ribonuclease III;protein_id=WP_011258602.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4941233 4941610 . - . ID=gene-LNP58_RS23280;Name=LNP58_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23280;old_locus_tag=LNP58_23240 NZ_CP086372.1 Protein Homology CDS 4941233 4941610 . - 0 ID=cds-WP_011258601.1;Parent=gene-LNP58_RS23280;Dbxref=Genbank:WP_011258601.1;Name=WP_011258601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050845.1;locus_tag=LNP58_RS23280;product=DUF4845 domain-containing protein;protein_id=WP_011258601.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4941641 4942441 . - . ID=gene-LNP58_RS23285;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LNP58_RS23285;old_locus_tag=LNP58_23245 NZ_CP086372.1 Protein Homology CDS 4941641 4942441 . - 0 ID=cds-WP_011258600.1;Parent=gene-LNP58_RS23285;Dbxref=Genbank:WP_011258600.1;Name=WP_011258600.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155604.1;locus_tag=LNP58_RS23285;product=signal peptidase I;protein_id=WP_011258600.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4942548 4944338 . - . ID=gene-LNP58_RS23290;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LNP58_RS23290;old_locus_tag=LNP58_23250 NZ_CP086372.1 Protein Homology CDS 4942548 4944338 . - 0 ID=cds-WP_041182078.1;Parent=gene-LNP58_RS23290;Dbxref=Genbank:WP_041182078.1;Name=WP_041182078.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300425.1;locus_tag=LNP58_RS23290;product=translation elongation factor 4;protein_id=WP_041182078.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4944519 4946105 . - . ID=gene-LNP58_RS23295;Name=LNP58_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23295;old_locus_tag=LNP58_23255 NZ_CP086372.1 Protein Homology CDS 4944519 4946105 . - 0 ID=cds-WP_011408249.1;Parent=gene-LNP58_RS23295;Dbxref=Genbank:WP_011408249.1;Name=WP_011408249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160027.1;locus_tag=LNP58_RS23295;product=DegQ family serine endoprotease;protein_id=WP_011408249.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4946215 4947114 . - . ID=gene-LNP58_RS23300;Name=LNP58_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23300;old_locus_tag=LNP58_23260 NZ_CP086372.1 Protein Homology CDS 4946215 4947114 . - 0 ID=cds-WP_011258597.1;Parent=gene-LNP58_RS23300;Dbxref=Genbank:WP_011258597.1;Name=WP_011258597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159519.1;locus_tag=LNP58_RS23300;product=sigma-E factor negative regulatory protein;protein_id=WP_011258597.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4947111 4947731 . - . ID=gene-LNP58_RS23305;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LNP58_RS23305;old_locus_tag=LNP58_23265 NZ_CP086372.1 Protein Homology CDS 4947111 4947731 . - 0 ID=cds-WP_041182077.1;Parent=gene-LNP58_RS23305;Dbxref=Genbank:WP_041182077.1;Name=WP_041182077.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962205.1;locus_tag=LNP58_RS23305;product=RNA polymerase sigma factor RpoE;protein_id=WP_041182077.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4947968 4950049 . + . ID=gene-LNP58_RS23310;Name=LNP58_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23310;old_locus_tag=LNP58_23270 NZ_CP086372.1 Protein Homology CDS 4947968 4950049 . + 0 ID=cds-WP_011258595.1;Parent=gene-LNP58_RS23310;Dbxref=Genbank:WP_011258595.1;Name=WP_011258595.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159518.1;locus_tag=LNP58_RS23310;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_011258595.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4950266 4951231 . - . ID=gene-LNP58_RS23315;Name=LNP58_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23315;old_locus_tag=LNP58_23275 NZ_CP086372.1 Protein Homology CDS 4950266 4951231 . - 0 ID=cds-WP_011408247.1;Parent=gene-LNP58_RS23315;Dbxref=Genbank:WP_011408247.1;Name=WP_011408247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488234.1;locus_tag=LNP58_RS23315;product=cation diffusion facilitator family transporter;protein_id=WP_011408247.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4951470 4952372 . - . ID=gene-LNP58_RS23320;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=LNP58_RS23320;old_locus_tag=LNP58_23280 NZ_CP086372.1 Protein Homology CDS 4951470 4952372 . - 0 ID=cds-WP_027703337.1;Parent=gene-LNP58_RS23320;Dbxref=Genbank:WP_027703337.1;Name=WP_027703337.1;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118158.1;locus_tag=LNP58_RS23320;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_027703337.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4952532 4953704 . - . ID=gene-LNP58_RS23325;Name=LNP58_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23325;old_locus_tag=LNP58_23285 NZ_CP086372.1 Protein Homology CDS 4952532 4953704 . - 0 ID=cds-WP_011408245.1;Parent=gene-LNP58_RS23325;Dbxref=Genbank:WP_011408245.1;Name=WP_011408245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155591.1;locus_tag=LNP58_RS23325;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_011408245.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4953704 4954501 . - . ID=gene-LNP58_RS23330;Name=LNP58_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23330;old_locus_tag=LNP58_23290 NZ_CP086372.1 Protein Homology CDS 4953704 4954501 . - 0 ID=cds-WP_011258591.1;Parent=gene-LNP58_RS23330;Dbxref=Genbank:WP_011258591.1;Name=WP_011258591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445261.1;locus_tag=LNP58_RS23330;product=enoyl-CoA hydratase;protein_id=WP_011258591.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4954498 4955679 . - . ID=gene-LNP58_RS23335;Name=LNP58_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23335;old_locus_tag=LNP58_23295 NZ_CP086372.1 Protein Homology CDS 4954498 4955679 . - 0 ID=cds-WP_011408244.1;Parent=gene-LNP58_RS23335;Dbxref=Genbank:WP_011408244.1;Name=WP_011408244.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303549.1;locus_tag=LNP58_RS23335;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011408244.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4955690 4957195 . - . ID=gene-LNP58_RS23340;Name=LNP58_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23340;old_locus_tag=LNP58_23300 NZ_CP086372.1 Protein Homology CDS 4955690 4957195 . - 0 ID=cds-WP_011408243.1;Parent=gene-LNP58_RS23340;Dbxref=Genbank:WP_011408243.1;Name=WP_011408243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155588.1;locus_tag=LNP58_RS23340;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_011408243.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4957334 4958719 . + . ID=gene-LNP58_RS23345;Name=LNP58_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23345;old_locus_tag=LNP58_23305 NZ_CP086372.1 Protein Homology CDS 4957334 4958719 . + 0 ID=cds-WP_011408242.1;Parent=gene-LNP58_RS23345;Dbxref=Genbank:WP_011408242.1;Name=WP_011408242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931112.1;locus_tag=LNP58_RS23345;product=short-chain fatty acyl-CoA regulator family protein;protein_id=WP_011408242.1;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4959056 4960517 . + . ID=gene-LNP58_RS23350;Name=LNP58_RS23350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23350;old_locus_tag=LNP58_23310;pseudo=true NZ_CP086372.1 Protein Homology CDS 4959056 4960517 . + 0 ID=cds-LNP58_RS23350;Parent=gene-LNP58_RS23350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488248.1;locus_tag=LNP58_RS23350;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4960752 4961141 . + . ID=gene-LNP58_RS23355;Name=LNP58_RS23355;end_range=4961141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23355;partial=true;pseudo=true NZ_CP086372.1 Protein Homology CDS 4960752 4961141 . + 0 ID=cds-LNP58_RS23355;Parent=gene-LNP58_RS23355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015926;end_range=4961141,.;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050835.1;locus_tag=LNP58_RS23355;partial=true;product=glycosyl hydrolase 53 family protein;pseudo=true;transl_table=11 NZ_CP086372.1 RefSeq pseudogene 4961136 4962340 . + . ID=gene-LNP58_RS23360;Name=LNP58_RS23360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LNP58_RS23360;partial=true;pseudo=true;start_range=.,4961136 NZ_CP086372.1 Protein Homology CDS 4961136 4962340 . + 0 ID=cds-LNP58_RS23360;Parent=gene-LNP58_RS23360;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171532.1;locus_tag=LNP58_RS23360;partial=true;product=DUF4982 domain-containing protein;pseudo=true;start_range=.,4961136;transl_table=11 NZ_CP086372.1 RefSeq gene 4962579 4962932 . - . ID=gene-LNP58_RS23365;Name=LNP58_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS23365;old_locus_tag=LNP58_23325 NZ_CP086372.1 Protein Homology CDS 4962579 4962932 . - 0 ID=cds-WP_011408237.1;Parent=gene-LNP58_RS23365;Dbxref=Genbank:WP_011408237.1;Name=WP_011408237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155583.1;locus_tag=LNP58_RS23365;product=hypothetical protein;protein_id=WP_011408237.1;transl_table=11 NZ_CP086372.1 RefSeq gene 4963099 4965030 . - . ID=gene-LNP58_RS00005;Name=LNP58_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LNP58_RS00005;old_locus_tag=LNP58_00005 NZ_CP086372.1 Protein Homology CDS 4963099 4965030 . - 0 ID=cds-WP_011258585.1;Parent=gene-LNP58_RS00005;Dbxref=Genbank:WP_011258585.1;Name=WP_011258585.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449168.1;locus_tag=LNP58_RS00005;product=alpha-L-fucosidase;protein_id=WP_011258585.1;transl_table=11 ###