##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM192924v2 #!genome-build-accession NCBI_Assembly:GCF_001929245.2 #!annotation-date 10/12/2022 14:21:42 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP047492.1 1 5093432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=64187 NZ_CP047492.1 RefSeq region 1 5093432 . + . ID=NZ_CP047492.1:1..5093432;Dbxref=taxon:64187;Is_circular=true;Name=ANONYMOUS;collection-date=2009;country=India;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Oryza sativa;pathovar=oryzae;strain=IXO1104 NZ_CP047492.1 RefSeq gene 1 1329 . + . ID=gene-IXO1104_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS00005;old_locus_tag=IXO1104_00005 NZ_CP047492.1 Protein Homology CDS 1 1329 . + 0 ID=cds-WP_011407161.1;Parent=gene-IXO1104_RS00005;Dbxref=Genbank:WP_011407161.1;Name=WP_011407161.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1;locus_tag=IXO1104_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_011407161.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1607 2707 . + . ID=gene-IXO1104_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=IXO1104_RS00010;old_locus_tag=IXO1104_00010 NZ_CP047492.1 Protein Homology CDS 1607 2707 . + 0 ID=cds-WP_011257008.1;Parent=gene-IXO1104_RS00010;Dbxref=Genbank:WP_011257008.1;Name=WP_011257008.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=IXO1104_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_011257008.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3959 5065 . + . ID=gene-IXO1104_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=IXO1104_RS00015;old_locus_tag=IXO1104_00015 NZ_CP047492.1 Protein Homology CDS 3959 5065 . + 0 ID=cds-WP_011257009.1;Parent=gene-IXO1104_RS00015;Dbxref=Genbank:WP_011257009.1;Name=WP_011257009.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501259.1;locus_tag=IXO1104_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_011257009.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5181 7625 . + . ID=gene-IXO1104_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=IXO1104_RS00020;old_locus_tag=IXO1104_00020 NZ_CP047492.1 Protein Homology CDS 5181 7625 . + 0 ID=cds-WP_012443553.1;Parent=gene-IXO1104_RS00020;Dbxref=Genbank:WP_012443553.1;Name=WP_012443553.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1;locus_tag=IXO1104_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_012443553.1;transl_table=11 NZ_CP047492.1 RefSeq gene 7693 8529 . + . ID=gene-IXO1104_RS00025;Name=IXO1104_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00025;old_locus_tag=IXO1104_00025 NZ_CP047492.1 Protein Homology CDS 7693 8529 . + 0 ID=cds-WP_012443554.1;Parent=gene-IXO1104_RS00025;Dbxref=Genbank:WP_012443554.1;Name=WP_012443554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971885.1;locus_tag=IXO1104_RS00025;product=CPBP family intramembrane metalloprotease;protein_id=WP_012443554.1;transl_table=11 NZ_CP047492.1 RefSeq gene 8716 9522 . + . ID=gene-IXO1104_RS00030;Name=IXO1104_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00030;old_locus_tag=IXO1104_00030 NZ_CP047492.1 Protein Homology CDS 8716 9522 . + 0 ID=cds-WP_011407165.1;Parent=gene-IXO1104_RS00030;Dbxref=Genbank:WP_011407165.1;Name=WP_011407165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901838.1;locus_tag=IXO1104_RS00030;product=M48 family metallopeptidase;protein_id=WP_011407165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 9799 10992 . + . ID=gene-IXO1104_RS00035;Name=IXO1104_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00035;old_locus_tag=IXO1104_00035 NZ_CP047492.1 Protein Homology CDS 9799 10992 . + 0 ID=cds-WP_011257013.1;Parent=gene-IXO1104_RS00035;Dbxref=Genbank:WP_011257013.1;Name=WP_011257013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1;locus_tag=IXO1104_RS00035;product=tetratricopeptide repeat protein;protein_id=WP_011257013.1;transl_table=11 NZ_CP047492.1 RefSeq gene 11260 11817 . + . ID=gene-IXO1104_RS00040;Name=IXO1104_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00040;old_locus_tag=IXO1104_00040 NZ_CP047492.1 Protein Homology CDS 11260 11817 . + 0 ID=cds-WP_075240306.1;Parent=gene-IXO1104_RS00040;Dbxref=Genbank:WP_075240306.1;Name=WP_075240306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505935.1;locus_tag=IXO1104_RS00040;product=energy transducer TonB;protein_id=WP_075240306.1;transl_table=11 NZ_CP047492.1 RefSeq gene 11902 12663 . + . ID=gene-IXO1104_RS00045;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=IXO1104_RS00045;old_locus_tag=IXO1104_00045 NZ_CP047492.1 Protein Homology CDS 11902 12663 . + 0 ID=cds-WP_011257015.1;Parent=gene-IXO1104_RS00045;Dbxref=Genbank:WP_011257015.1;Name=WP_011257015.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1;locus_tag=IXO1104_RS00045;product=TonB-system energizer ExbB;protein_id=WP_011257015.1;transl_table=11 NZ_CP047492.1 RefSeq gene 12710 13132 . + . ID=gene-IXO1104_RS00050;Name=IXO1104_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00050;old_locus_tag=IXO1104_00050 NZ_CP047492.1 Protein Homology CDS 12710 13132 . + 0 ID=cds-WP_010364790.1;Parent=gene-IXO1104_RS00050;Dbxref=Genbank:WP_010364790.1;Name=WP_010364790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1;locus_tag=IXO1104_RS00050;product=biopolymer transporter ExbD;protein_id=WP_010364790.1;transl_table=11 NZ_CP047492.1 RefSeq gene 13136 13549 . + . ID=gene-IXO1104_RS00055;Name=IXO1104_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00055;old_locus_tag=IXO1104_00055 NZ_CP047492.1 Protein Homology CDS 13136 13549 . + 0 ID=cds-WP_011257016.1;Parent=gene-IXO1104_RS00055;Dbxref=Genbank:WP_011257016.1;Name=WP_011257016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155972.1;locus_tag=IXO1104_RS00055;product=biopolymer transporter ExbD;protein_id=WP_011257016.1;transl_table=11 NZ_CP047492.1 RefSeq gene 13845 14612 . - . ID=gene-IXO1104_RS00060;Name=IXO1104_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00060;old_locus_tag=IXO1104_00060 NZ_CP047492.1 Protein Homology CDS 13845 14612 . - 0 ID=cds-WP_011257017.1;Parent=gene-IXO1104_RS00060;Dbxref=Genbank:WP_011257017.1;Name=WP_011257017.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364763.1;locus_tag=IXO1104_RS00060;product=pyridoxine 5'-phosphate synthase;protein_id=WP_011257017.1;transl_table=11 NZ_CP047492.1 RefSeq gene 14623 14892 . - . ID=gene-IXO1104_RS00065;Name=IXO1104_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00065;old_locus_tag=IXO1104_00065 NZ_CP047492.1 Protein Homology CDS 14623 14892 . - 0 ID=cds-WP_019301610.1;Parent=gene-IXO1104_RS00065;Dbxref=Genbank:WP_019301610.1;Name=WP_019301610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155969.1;locus_tag=IXO1104_RS00065;product=hypothetical protein;protein_id=WP_019301610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 14967 16427 . - . ID=gene-IXO1104_RS00070;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=IXO1104_RS00070;old_locus_tag=IXO1104_00070 NZ_CP047492.1 Protein Homology CDS 14967 16427 . - 0 ID=cds-WP_011257019.1;Parent=gene-IXO1104_RS00070;Dbxref=Genbank:WP_011257019.1;Name=WP_011257019.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155968.1;locus_tag=IXO1104_RS00070;product=cardiolipin synthase;protein_id=WP_011257019.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 16809 17034 . + . ID=gene-IXO1104_RS00075;Name=IXO1104_RS00075;end_range=17034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00075;old_locus_tag=IXO1104_00075;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 16809 17034 . + 0 ID=cds-IXO1104_RS00075;Parent=gene-IXO1104_RS00075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167724.1;locus_tag=IXO1104_RS00075;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 17074 18084 . - . ID=gene-IXO1104_RS00080;Name=IXO1104_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00080;old_locus_tag=IXO1104_00080 NZ_CP047492.1 Protein Homology CDS 17074 18084 . - 0 ID=cds-WP_011257020.1;Parent=gene-IXO1104_RS00080;Dbxref=Genbank:WP_011257020.1;Name=WP_011257020.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379759.1;locus_tag=IXO1104_RS00080;product=class 1 fructose-bisphosphatase;protein_id=WP_011257020.1;transl_table=11 NZ_CP047492.1 RefSeq gene 18356 19558 . - . ID=gene-IXO1104_RS00085;Name=IXO1104_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00085;old_locus_tag=IXO1104_00085 NZ_CP047492.1 Protein Homology CDS 18356 19558 . - 0 ID=cds-WP_011257021.1;Parent=gene-IXO1104_RS00085;Dbxref=Genbank:WP_011257021.1;Name=WP_011257021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849085.1;locus_tag=IXO1104_RS00085;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_011257021.1;transl_table=11 NZ_CP047492.1 RefSeq gene 19700 21838 . + . ID=gene-IXO1104_RS00090;Name=IXO1104_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00090;old_locus_tag=IXO1104_00090 NZ_CP047492.1 Protein Homology CDS 19700 21838 . + 0 ID=cds-WP_011407169.1;Parent=gene-IXO1104_RS00090;Dbxref=Genbank:WP_011407169.1;Name=WP_011407169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915984.1;locus_tag=IXO1104_RS00090;product=TonB-dependent receptor;protein_id=WP_011407169.1;transl_table=11 NZ_CP047492.1 RefSeq gene 22049 22342 . + . ID=gene-IXO1104_RS00095;Name=IXO1104_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00095;old_locus_tag=IXO1104_00095 NZ_CP047492.1 Protein Homology CDS 22049 22342 . + 0 ID=cds-WP_012443560.1;Parent=gene-IXO1104_RS00095;Dbxref=Genbank:WP_012443560.1;Name=WP_012443560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379761.1;locus_tag=IXO1104_RS00095;product=hypothetical protein;protein_id=WP_012443560.1;transl_table=11 NZ_CP047492.1 RefSeq gene 22525 23148 . + . ID=gene-IXO1104_RS00100;Name=IXO1104_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00100;old_locus_tag=IXO1104_00100 NZ_CP047492.1 Protein Homology CDS 22525 23148 . + 0 ID=cds-WP_143698755.1;Parent=gene-IXO1104_RS00100;Dbxref=Genbank:WP_143698755.1;Name=WP_143698755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501386.1;locus_tag=IXO1104_RS00100;product=hypothetical protein;protein_id=WP_143698755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 23116 24103 . - . ID=gene-IXO1104_RS00105;Name=IXO1104_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00105;old_locus_tag=IXO1104_00105 NZ_CP047492.1 Protein Homology CDS 23618 24103 . - 0 ID=cds-WP_103057752.1;Parent=gene-IXO1104_RS00105;Dbxref=Genbank:WP_103057752.1;Name=WP_103057752.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1104_RS00105;product=IS5 family transposase;protein_id=WP_103057752.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 23116 23616 . - 0 ID=cds-WP_103057752.1;Parent=gene-IXO1104_RS00105;Dbxref=Genbank:WP_103057752.1;Name=WP_103057752.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1104_RS00105;product=IS5 family transposase;protein_id=WP_103057752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 24151 25317 . - . ID=gene-IXO1104_RS00110;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=IXO1104_RS00110;old_locus_tag=IXO1104_00110 NZ_CP047492.1 Protein Homology CDS 24151 25317 . - 0 ID=cds-WP_011257025.1;Parent=gene-IXO1104_RS00110;Dbxref=Genbank:WP_011257025.1;Name=WP_011257025.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573929.1;locus_tag=IXO1104_RS00110;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_011257025.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 25464 26028 . - . ID=gene-IXO1104_RS00115;Name=IXO1104_RS00115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00115;old_locus_tag=IXO1104_00115;pseudo=true NZ_CP047492.1 Protein Homology CDS 25464 26028 . - 0 ID=cds-IXO1104_RS00115;Parent=gene-IXO1104_RS00115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165246.1;locus_tag=IXO1104_RS00115;product=isoprenylcysteine carboxylmethyltransferase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 26089 26355 . + . ID=gene-IXO1104_RS00120;Name=IXO1104_RS00120;end_range=26355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00120;old_locus_tag=IXO1104_00120;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 26089 26355 . + 0 ID=cds-IXO1104_RS00120;Parent=gene-IXO1104_RS00120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=26355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088940.1;locus_tag=IXO1104_RS00120;partial=true;product=sensor histidine kinase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 26358 27224 . - . ID=gene-IXO1104_RS00125;Name=IXO1104_RS00125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00125;old_locus_tag=IXO1104_00125;partial=true;pseudo=true;start_range=.,26358 NZ_CP047492.1 Protein Homology CDS 26358 27224 . - 0 ID=cds-IXO1104_RS00125;Parent=gene-IXO1104_RS00125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154859.1;locus_tag=IXO1104_RS00125;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;start_range=.,26358;transl_table=11 NZ_CP047492.1 RefSeq gene 27506 28723 . + . ID=gene-IXO1104_RS00130;Name=IXO1104_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00130;old_locus_tag=IXO1104_00130 NZ_CP047492.1 Protein Homology CDS 27506 28723 . + 0 ID=cds-WP_012443565.1;Parent=gene-IXO1104_RS00130;Dbxref=Genbank:WP_012443565.1;Name=WP_012443565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443565.1;locus_tag=IXO1104_RS00130;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_012443565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 28747 28887 . - . ID=gene-IXO1104_RS00135;Name=IXO1104_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00135 NZ_CP047492.1 GeneMarkS-2+ CDS 28747 28887 . - 0 ID=cds-WP_162828845.1;Parent=gene-IXO1104_RS00135;Dbxref=Genbank:WP_162828845.1;Name=WP_162828845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00135;product=hypothetical protein;protein_id=WP_162828845.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 28944 29137 . + . ID=gene-IXO1104_RS00140;Name=IXO1104_RS00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00140;old_locus_tag=IXO1104_00135;pseudo=true NZ_CP047492.1 Protein Homology CDS 28944 29137 . + 0 ID=cds-IXO1104_RS00140;Parent=gene-IXO1104_RS00140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915938.1;locus_tag=IXO1104_RS00140;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 29344 30366 . - . ID=gene-IXO1104_RS00145;Name=IXO1104_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00145;old_locus_tag=IXO1104_00140 NZ_CP047492.1 Protein Homology CDS 29344 30366 . - 0 ID=cds-WP_012443568.1;Parent=gene-IXO1104_RS00145;Dbxref=Genbank:WP_012443568.1;Name=WP_012443568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970754.1;locus_tag=IXO1104_RS00145;product=sugar kinase;protein_id=WP_012443568.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 30653 31006 . + . ID=gene-IXO1104_RS00150;Name=IXO1104_RS00150;end_range=31006,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00150;old_locus_tag=IXO1104_00145;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 30653 31006 . + 0 ID=cds-IXO1104_RS00150;Parent=gene-IXO1104_RS00150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=31006,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970752.1;locus_tag=IXO1104_RS00150;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 30947 32176 . - . ID=gene-IXO1104_RS00155;Name=IXO1104_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00155;old_locus_tag=IXO1104_00150 NZ_CP047492.1 Protein Homology CDS 30947 32176 . - 0 ID=cds-WP_229002806.1;Parent=gene-IXO1104_RS00155;Dbxref=Genbank:WP_229002806.1;Name=WP_229002806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=IXO1104_RS00155;product=AAA family ATPase;protein_id=WP_229002806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 32274 33072 . + . ID=gene-IXO1104_RS00160;Name=IXO1104_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00160;old_locus_tag=IXO1104_00155 NZ_CP047492.1 Protein Homology CDS 32274 32545 . + 0 ID=cds-WP_094187728.1;Parent=gene-IXO1104_RS00160;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS00160;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 32544 33072 . + 1 ID=cds-WP_094187728.1;Parent=gene-IXO1104_RS00160;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS00160;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 33059 34033 . - . ID=gene-IXO1104_RS00165;Name=IXO1104_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00165;old_locus_tag=IXO1104_00160 NZ_CP047492.1 Protein Homology CDS 33059 34033 . - 0 ID=cds-WP_157724563.1;Parent=gene-IXO1104_RS00165;Dbxref=Genbank:WP_157724563.1;Name=WP_157724563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=IXO1104_RS00165;product=AAA family ATPase;protein_id=WP_157724563.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 34508 34681 . - . ID=gene-IXO1104_RS00170;Name=IXO1104_RS00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00170;old_locus_tag=IXO1104_00165;partial=true;pseudo=true;start_range=.,34508 NZ_CP047492.1 Protein Homology CDS 34508 34681 . - 0 ID=cds-IXO1104_RS00170;Parent=gene-IXO1104_RS00170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS00170;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,34508;transl_table=11 NZ_CP047492.1 RefSeq gene 34918 35580 . - . ID=gene-IXO1104_RS00175;Name=IXO1104_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00175;old_locus_tag=IXO1104_00170 NZ_CP047492.1 Protein Homology CDS 34918 35580 . - 0 ID=cds-WP_012443571.1;Parent=gene-IXO1104_RS00175;Dbxref=Genbank:WP_012443571.1;Name=WP_012443571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159050.1;locus_tag=IXO1104_RS00175;product=DUF938 domain-containing protein;protein_id=WP_012443571.1;transl_table=11 NZ_CP047492.1 RefSeq gene 35734 36528 . - . ID=gene-IXO1104_RS00180;Name=IXO1104_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00180;old_locus_tag=IXO1104_00175 NZ_CP047492.1 Protein Homology CDS 35734 36528 . - 0 ID=cds-WP_012443572.1;Parent=gene-IXO1104_RS00180;Dbxref=Genbank:WP_012443572.1;Name=WP_012443572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116524.1;locus_tag=IXO1104_RS00180;product=EcsC family protein;protein_id=WP_012443572.1;transl_table=11 NZ_CP047492.1 RefSeq gene 36696 37169 . + . ID=gene-IXO1104_RS00185;Name=IXO1104_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00185;old_locus_tag=IXO1104_00180 NZ_CP047492.1 Protein Homology CDS 36696 37169 . + 0 ID=cds-WP_027704023.1;Parent=gene-IXO1104_RS00185;Dbxref=Genbank:WP_027704023.1;Name=WP_027704023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118118.1;locus_tag=IXO1104_RS00185;product=SRPBCC domain-containing protein;protein_id=WP_027704023.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 37528 38766 . - . ID=gene-IXO1104_RS00190;Name=IXO1104_RS00190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00190;old_locus_tag=IXO1104_00185;pseudo=true NZ_CP047492.1 Protein Homology CDS 37528 38766 . - 0 ID=cds-IXO1104_RS00190;Parent=gene-IXO1104_RS00190;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487917.1;locus_tag=IXO1104_RS00190;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 39250 39331 . + . ID=gene-IXO1104_RS00195;Name=IXO1104_RS00195;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS00195;old_locus_tag=IXO1104_00190 NZ_CP047492.1 cmsearch ncRNA 39250 39331 . + . ID=rna-IXO1104_RS00195;Parent=gene-IXO1104_RS00195;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00195;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 39250 39331 . + . ID=exon-IXO1104_RS00195-1;Parent=rna-IXO1104_RS00195;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00195;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 39395 40357 . - . ID=gene-IXO1104_RS00200;Name=IXO1104_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00200;old_locus_tag=IXO1104_00195 NZ_CP047492.1 Protein Homology CDS 39395 40357 . - 0 ID=cds-WP_011409560.1;Parent=gene-IXO1104_RS00200;Dbxref=Genbank:WP_011409560.1;Name=WP_011409560.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS00200;product=IS1595 family transposase;protein_id=WP_011409560.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 40495 40823 . - . ID=gene-IXO1104_RS00205;Name=IXO1104_RS00205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00205;old_locus_tag=IXO1104_00200;pseudo=true NZ_CP047492.1 Protein Homology CDS 40495 40823 . - 0 ID=cds-IXO1104_RS00205;Parent=gene-IXO1104_RS00205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364642.1;locus_tag=IXO1104_RS00205;product=thioredoxin family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 40844 41242 . - . ID=gene-IXO1104_RS00210;Name=IXO1104_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00210;old_locus_tag=IXO1104_00205 NZ_CP047492.1 Protein Homology CDS 40844 41242 . - 0 ID=cds-WP_012443578.1;Parent=gene-IXO1104_RS00210;Dbxref=Genbank:WP_012443578.1;Name=WP_012443578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809798.1;locus_tag=IXO1104_RS00210;product=host attachment family protein;protein_id=WP_012443578.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 41404 42080 . - . ID=gene-IXO1104_RS00215;Name=IXO1104_RS00215;end_range=42080,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00215;old_locus_tag=IXO1104_00210;partial=true;pseudo=true;start_range=.,41404 NZ_CP047492.1 Protein Homology CDS 41404 42080 . - 0 ID=cds-IXO1104_RS00215;Parent=gene-IXO1104_RS00215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=42080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171597.1;locus_tag=IXO1104_RS00215;partial=true;product=Zn-dependent protease with chaperone function;pseudo=true;start_range=.,41404;transl_table=11 NZ_CP047492.1 RefSeq gene 42196 42666 . - . ID=gene-IXO1104_RS00220;Name=IXO1104_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00220;old_locus_tag=IXO1104_00215 NZ_CP047492.1 Protein Homology CDS 42196 42666 . - 0 ID=cds-WP_027704036.1;Parent=gene-IXO1104_RS00220;Dbxref=Genbank:WP_027704036.1;Name=WP_027704036.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302281.1;locus_tag=IXO1104_RS00220;product=NUDIX domain-containing protein;protein_id=WP_027704036.1;transl_table=11 NZ_CP047492.1 RefSeq gene 42782 42958 . + . ID=gene-IXO1104_RS00225;Name=IXO1104_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00225 NZ_CP047492.1 Protein Homology CDS 42782 42958 . + 0 ID=cds-WP_011257044.1;Parent=gene-IXO1104_RS00225;Dbxref=Genbank:WP_011257044.1;Name=WP_011257044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257044.1;locus_tag=IXO1104_RS00225;product=hypothetical protein;protein_id=WP_011257044.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 43069 44136 . + . ID=gene-IXO1104_RS00230;Name=IXO1104_RS00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00230;old_locus_tag=IXO1104_00220;pseudo=true NZ_CP047492.1 Protein Homology CDS 43069 44136 . + 0 ID=cds-IXO1104_RS00230;Parent=gene-IXO1104_RS00230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163989.1;locus_tag=IXO1104_RS00230;product=M4 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 44133 44444 . + . ID=gene-IXO1104_RS00235;Name=IXO1104_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00235;old_locus_tag=IXO1104_00225 NZ_CP047492.1 Protein Homology CDS 44133 44444 . + 0 ID=cds-WP_011407233.1;Parent=gene-IXO1104_RS00235;Dbxref=Genbank:WP_011407233.1;Name=WP_011407233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257045.1;locus_tag=IXO1104_RS00235;product=hypothetical protein;protein_id=WP_011407233.1;transl_table=11 NZ_CP047492.1 RefSeq gene 44699 45646 . - . ID=gene-IXO1104_RS00240;Name=IXO1104_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00240;old_locus_tag=IXO1104_00230 NZ_CP047492.1 Protein Homology CDS 44699 45646 . - 0 ID=cds-WP_011407232.1;Parent=gene-IXO1104_RS00240;Dbxref=Genbank:WP_011407232.1;Name=WP_011407232.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=IXO1104_RS00240;product=IS30 family transposase;protein_id=WP_011407232.1;transl_table=11 NZ_CP047492.1 RefSeq gene 45787 46833 . - . ID=gene-IXO1104_RS00245;Name=IXO1104_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00245;old_locus_tag=IXO1104_00235 NZ_CP047492.1 Protein Homology CDS 45787 46833 . - 0 ID=cds-WP_133264465.1;Parent=gene-IXO1104_RS00245;Dbxref=Genbank:WP_133264465.1;Name=WP_133264465.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443584.1;locus_tag=IXO1104_RS00245;product=IS630 family transposase;protein_id=WP_133264465.1;transl_table=11 NZ_CP047492.1 RefSeq gene 46972 47253 . + . ID=gene-IXO1104_RS00250;Name=IXO1104_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00250;old_locus_tag=IXO1104_00240 NZ_CP047492.1 Protein Homology CDS 46972 47253 . + 0 ID=cds-WP_011257048.1;Parent=gene-IXO1104_RS00250;Dbxref=Genbank:WP_011257048.1;Name=WP_011257048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257048.1;locus_tag=IXO1104_RS00250;product=hypothetical protein;protein_id=WP_011257048.1;transl_table=11 NZ_CP047492.1 RefSeq gene 47306 47566 . + . ID=gene-IXO1104_RS00255;Name=IXO1104_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00255;old_locus_tag=IXO1104_00245 NZ_CP047492.1 Protein Homology CDS 47306 47566 . + 0 ID=cds-WP_011407230.1;Parent=gene-IXO1104_RS00255;Dbxref=Genbank:WP_011407230.1;Name=WP_011407230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443586.1;locus_tag=IXO1104_RS00255;product=hypothetical protein;protein_id=WP_011407230.1;transl_table=11 NZ_CP047492.1 RefSeq gene 47634 47843 . + . ID=gene-IXO1104_RS00260;Name=IXO1104_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00260;old_locus_tag=IXO1104_00250 NZ_CP047492.1 GeneMarkS-2+ CDS 47634 47843 . + 0 ID=cds-WP_125168735.1;Parent=gene-IXO1104_RS00260;Dbxref=Genbank:WP_125168735.1;Name=WP_125168735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00260;product=hypothetical protein;protein_id=WP_125168735.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 47957 48914 . - . ID=gene-IXO1104_RS00265;Name=IXO1104_RS00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00265;old_locus_tag=IXO1104_00255;pseudo=true NZ_CP047492.1 Protein Homology CDS 47957 48914 . - 0 ID=cds-IXO1104_RS00265;Parent=gene-IXO1104_RS00265;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS00265;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 48980 49420 . + . ID=gene-IXO1104_RS00270;Name=IXO1104_RS00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00270;old_locus_tag=IXO1104_00260;partial=true;pseudo=true;start_range=.,48980 NZ_CP047492.1 Protein Homology CDS 48980 49420 . + 0 ID=cds-IXO1104_RS00270;Parent=gene-IXO1104_RS00270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158206.1;locus_tag=IXO1104_RS00270;partial=true;product=DUF4142 domain-containing protein;pseudo=true;start_range=.,48980;transl_table=11 NZ_CP047492.1 RefSeq gene 49626 50513 . + . ID=gene-IXO1104_RS00275;Name=IXO1104_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00275;old_locus_tag=IXO1104_00265 NZ_CP047492.1 Protein Homology CDS 49626 50513 . + 0 ID=cds-WP_075239475.1;Parent=gene-IXO1104_RS00275;Dbxref=Genbank:WP_075239475.1;Name=WP_075239475.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159091.1;locus_tag=IXO1104_RS00275;product=TIGR01777 family oxidoreductase;protein_id=WP_075239475.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 50661 50753 . + . ID=gene-IXO1104_RS00280;Name=IXO1104_RS00280;end_range=50753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00280;old_locus_tag=IXO1104_00270;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 50661 50753 . + 0 ID=cds-IXO1104_RS00280;Parent=gene-IXO1104_RS00280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=50753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091309.1;locus_tag=IXO1104_RS00280;partial=true;product=DNA-binding response regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 50777 50974 . + . ID=gene-IXO1104_RS00285;Name=IXO1104_RS00285;end_range=50974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00285;partial=true;pseudo=true;start_range=.,50777 NZ_CP047492.1 Protein Homology CDS 50777 50974 . + 0 ID=cds-IXO1104_RS00285;Parent=gene-IXO1104_RS00285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=50974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158209.1;locus_tag=IXO1104_RS00285;partial=true;product=two-component sensor histidine kinase;pseudo=true;start_range=.,50777;transl_table=11 NZ_CP047492.1 RefSeq gene 51596 52447 . - . ID=gene-IXO1104_RS00290;Name=IXO1104_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00290;old_locus_tag=IXO1104_00280 NZ_CP047492.1 Protein Homology CDS 51596 52447 . - 0 ID=cds-WP_011407227.1;Parent=gene-IXO1104_RS00290;Dbxref=Genbank:WP_011407227.1;Name=WP_011407227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052649.1;locus_tag=IXO1104_RS00290;product=histidine biosynthesis protein HisIE;protein_id=WP_011407227.1;transl_table=11 NZ_CP047492.1 RefSeq gene 52689 54125 . + . ID=gene-IXO1104_RS00295;Name=IXO1104_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00295;old_locus_tag=IXO1104_00285 NZ_CP047492.1 Protein Homology CDS 52689 54125 . + 0 ID=cds-WP_011257055.1;Parent=gene-IXO1104_RS00295;Dbxref=Genbank:WP_011257055.1;Name=WP_011257055.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257055.1;locus_tag=IXO1104_RS00295;product=Do family serine endopeptidase;protein_id=WP_011257055.1;transl_table=11 NZ_CP047492.1 RefSeq gene 54242 54604 . + . ID=gene-IXO1104_RS00300;Name=IXO1104_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00300;old_locus_tag=IXO1104_00290 NZ_CP047492.1 Protein Homology CDS 54242 54604 . + 0 ID=cds-WP_011407225.1;Parent=gene-IXO1104_RS00300;Dbxref=Genbank:WP_011407225.1;Name=WP_011407225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966985.1;locus_tag=IXO1104_RS00300;product=hypothetical protein;protein_id=WP_011407225.1;transl_table=11 NZ_CP047492.1 RefSeq gene 54608 55093 . + . ID=gene-IXO1104_RS00305;Name=IXO1104_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00305;old_locus_tag=IXO1104_00295 NZ_CP047492.1 Protein Homology CDS 54608 55093 . + 0 ID=cds-WP_011407224.1;Parent=gene-IXO1104_RS00305;Dbxref=Genbank:WP_011407224.1;Name=WP_011407224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115391.1;locus_tag=IXO1104_RS00305;product=hypothetical protein;protein_id=WP_011407224.1;transl_table=11 NZ_CP047492.1 RefSeq gene 55090 55473 . + . ID=gene-IXO1104_RS00310;Name=IXO1104_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00310;old_locus_tag=IXO1104_00300 NZ_CP047492.1 Protein Homology CDS 55090 55473 . + 0 ID=cds-WP_041182535.1;Parent=gene-IXO1104_RS00310;Dbxref=Genbank:WP_041182535.1;Name=WP_041182535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117789.1;locus_tag=IXO1104_RS00310;product=hypothetical protein;protein_id=WP_041182535.1;transl_table=11 NZ_CP047492.1 RefSeq gene 55643 55719 . + . ID=gene-IXO1104_RS00315;Name=IXO1104_RS00315;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS00315;old_locus_tag=IXO1104_00305 NZ_CP047492.1 cmsearch ncRNA 55643 55719 . + . ID=rna-IXO1104_RS00315;Parent=gene-IXO1104_RS00315;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00315;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 55643 55719 . + . ID=exon-IXO1104_RS00315-1;Parent=rna-IXO1104_RS00315;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00315;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 56031 57659 . - . ID=gene-IXO1104_RS00320;Name=IXO1104_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00320;old_locus_tag=IXO1104_00310 NZ_CP047492.1 Protein Homology CDS 56031 57659 . - 0 ID=cds-WP_027703833.1;Parent=gene-IXO1104_RS00320;Dbxref=Genbank:WP_027703833.1;Name=WP_027703833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505164.1;locus_tag=IXO1104_RS00320;product=hypothetical protein;protein_id=WP_027703833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 58039 58176 . - . ID=gene-IXO1104_RS00325;Name=IXO1104_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00325 NZ_CP047492.1 Protein Homology CDS 58039 58176 . - 0 ID=cds-WP_012443591.1;Parent=gene-IXO1104_RS00325;Dbxref=Genbank:WP_012443591.1;Name=WP_012443591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505163.1;locus_tag=IXO1104_RS00325;product=hypothetical protein;protein_id=WP_012443591.1;transl_table=11 NZ_CP047492.1 RefSeq gene 58535 60943 . - . ID=gene-IXO1104_RS00330;Name=IXO1104_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00330;old_locus_tag=IXO1104_00315 NZ_CP047492.1 Protein Homology CDS 58535 60943 . - 0 ID=cds-WP_012443593.1;Parent=gene-IXO1104_RS00330;Dbxref=Genbank:WP_012443593.1;Name=WP_012443593.1;Ontology_term=GO:0009877;gbkey=CDS;go_process=nodulation|0009877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160376.1;locus_tag=IXO1104_RS00330;product=HrpF/NolX family T3SS translocon protein;protein_id=WP_012443593.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 61528 62846 . + . ID=gene-IXO1104_RS00335;Name=IXO1104_RS00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00335;old_locus_tag=IXO1104_00320;pseudo=true NZ_CP047492.1 Protein Homology CDS 61528 62846 . + 0 ID=cds-IXO1104_RS00335;Parent=gene-IXO1104_RS00335;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS00335;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 63075 63521 . + . ID=gene-IXO1104_RS00340;Name=IXO1104_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00340;old_locus_tag=IXO1104_00325 NZ_CP047492.1 Protein Homology CDS 63075 63521 . + 0 ID=cds-WP_011407217.1;Parent=gene-IXO1104_RS00340;Dbxref=Genbank:WP_011407217.1;Name=WP_011407217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367891.1;locus_tag=IXO1104_RS00340;product=hypothetical protein;protein_id=WP_011407217.1;transl_table=11 NZ_CP047492.1 RefSeq gene 63518 65503 . + . ID=gene-IXO1104_RS00345;Name=IXO1104_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00345;old_locus_tag=IXO1104_00330 NZ_CP047492.1 Protein Homology CDS 63518 65503 . + 0 ID=cds-WP_011257071.1;Parent=gene-IXO1104_RS00345;Dbxref=Genbank:WP_011257071.1;Name=WP_011257071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257071.1;locus_tag=IXO1104_RS00345;product=hypothetical protein;protein_id=WP_011257071.1;transl_table=11 NZ_CP047492.1 RefSeq gene 65609 65685 . - . ID=gene-IXO1104_RS00350;Name=IXO1104_RS00350;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS00350;old_locus_tag=IXO1104_00335 NZ_CP047492.1 cmsearch ncRNA 65609 65685 . - . ID=rna-IXO1104_RS00350;Parent=gene-IXO1104_RS00350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00350;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 65609 65685 . - . ID=exon-IXO1104_RS00350-1;Parent=rna-IXO1104_RS00350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00350;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 65919 66389 . - . ID=gene-IXO1104_RS00355;Name=IXO1104_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00355;old_locus_tag=IXO1104_00340 NZ_CP047492.1 Protein Homology CDS 65919 66389 . - 0 ID=cds-WP_011257072.1;Parent=gene-IXO1104_RS00355;Dbxref=Genbank:WP_011257072.1;Name=WP_011257072.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912720.1;locus_tag=IXO1104_RS00355;product=CesT family type III secretion system chaperone;protein_id=WP_011257072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 66444 66725 . - . ID=gene-IXO1104_RS00360;Name=IXO1104_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00360;old_locus_tag=IXO1104_00345 NZ_CP047492.1 GeneMarkS-2+ CDS 66444 66725 . - 0 ID=cds-WP_011257073.1;Parent=gene-IXO1104_RS00360;Dbxref=Genbank:WP_011257073.1;Name=WP_011257073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00360;product=hypothetical protein;protein_id=WP_011257073.1;transl_table=11 NZ_CP047492.1 RefSeq gene 66806 67048 . - . ID=gene-IXO1104_RS00365;Name=IXO1104_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00365;old_locus_tag=IXO1104_00350 NZ_CP047492.1 Protein Homology CDS 66806 67048 . - 0 ID=cds-WP_011257074.1;Parent=gene-IXO1104_RS00365;Dbxref=Genbank:WP_011257074.1;Name=WP_011257074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301127.1;locus_tag=IXO1104_RS00365;product=hypothetical protein;protein_id=WP_011257074.1;transl_table=11 NZ_CP047492.1 RefSeq gene 67058 67996 . - . ID=gene-IXO1104_RS00370;Name=IXO1104_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00370;old_locus_tag=IXO1104_00355 NZ_CP047492.1 Protein Homology CDS 67058 67996 . - 0 ID=cds-WP_075240584.1;Parent=gene-IXO1104_RS00370;Dbxref=Genbank:WP_075240584.1;Name=WP_075240584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965398.1;locus_tag=IXO1104_RS00370;product=serine kinase;protein_id=WP_075240584.1;transl_table=11 NZ_CP047492.1 RefSeq gene 67993 68820 . - . ID=gene-IXO1104_RS00375;Name=IXO1104_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00375;old_locus_tag=IXO1104_00360 NZ_CP047492.1 Protein Homology CDS 67993 68820 . - 0 ID=cds-WP_011257076.1;Parent=gene-IXO1104_RS00375;Dbxref=Genbank:WP_011257076.1;Name=WP_011257076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156504.1;locus_tag=IXO1104_RS00375;product=hypothetical protein;protein_id=WP_011257076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 68817 69077 . - . ID=gene-IXO1104_RS00380;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=IXO1104_RS00380;old_locus_tag=IXO1104_00365 NZ_CP047492.1 Protein Homology CDS 68817 69077 . - 0 ID=cds-WP_011257077.1;Parent=gene-IXO1104_RS00380;Dbxref=Genbank:WP_011257077.1;Name=WP_011257077.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901415.1;locus_tag=IXO1104_RS00380;product=type III secretion system export apparatus subunit SctS;protein_id=WP_011257077.1;transl_table=11 NZ_CP047492.1 RefSeq gene 69082 69726 . - . ID=gene-IXO1104_RS00385;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=IXO1104_RS00385;old_locus_tag=IXO1104_00370 NZ_CP047492.1 Protein Homology CDS 69082 69726 . - 0 ID=cds-WP_011407215.1;Parent=gene-IXO1104_RS00385;Dbxref=Genbank:WP_011407215.1;Name=WP_011407215.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158888.1;locus_tag=IXO1104_RS00385;product=type III secretion system export apparatus subunit SctR;protein_id=WP_011407215.1;transl_table=11 NZ_CP047492.1 RefSeq gene 69713 70666 . - . ID=gene-IXO1104_RS00390;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS00390;old_locus_tag=IXO1104_00375 NZ_CP047492.1 Protein Homology CDS 69713 70666 . - 0 ID=cds-WP_027704248.1;Parent=gene-IXO1104_RS00390;Dbxref=Genbank:WP_027704248.1;Name=WP_027704248.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156505.1;locus_tag=IXO1104_RS00390;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_027704248.1;transl_table=11 NZ_CP047492.1 RefSeq gene 70759 71400 . - . ID=gene-IXO1104_RS00395;Name=sctP;gbkey=Gene;gene=sctP;gene_biotype=protein_coding;locus_tag=IXO1104_RS00395;old_locus_tag=IXO1104_00380 NZ_CP047492.1 Protein Homology CDS 70759 71400 . - 0 ID=cds-WP_027704247.1;Parent=gene-IXO1104_RS00395;Dbxref=Genbank:WP_027704247.1;Name=WP_027704247.1;gbkey=CDS;gene=sctP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575445.1;locus_tag=IXO1104_RS00395;product=type III secretion system protein SctP;protein_id=WP_027704247.1;transl_table=11 NZ_CP047492.1 RefSeq gene 71400 73337 . - . ID=gene-IXO1104_RS00400;Name=IXO1104_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00400;old_locus_tag=IXO1104_00385 NZ_CP047492.1 Protein Homology CDS 71400 73337 . - 0 ID=cds-WP_011257081.1;Parent=gene-IXO1104_RS00400;Dbxref=Genbank:WP_011257081.1;Name=WP_011257081.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046934829.1;locus_tag=IXO1104_RS00400;product=FHIPEP family type III secretion protein;protein_id=WP_011257081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 73331 74410 . - . ID=gene-IXO1104_RS00405;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=IXO1104_RS00405;old_locus_tag=IXO1104_00390 NZ_CP047492.1 Protein Homology CDS 73331 74410 . - 0 ID=cds-WP_012443605.1;Parent=gene-IXO1104_RS00405;Dbxref=Genbank:WP_012443605.1;Name=WP_012443605.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912703.1;locus_tag=IXO1104_RS00405;product=type III secretion system export apparatus subunit SctU;protein_id=WP_012443605.1;transl_table=11 NZ_CP047492.1 RefSeq gene 74625 75080 . + . ID=gene-IXO1104_RS00410;Name=IXO1104_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00410;old_locus_tag=IXO1104_00395 NZ_CP047492.1 Protein Homology CDS 74625 75080 . + 0 ID=cds-WP_011257083.1;Parent=gene-IXO1104_RS00410;Dbxref=Genbank:WP_011257083.1;Name=WP_011257083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156509.1;locus_tag=IXO1104_RS00410;product=HrpB1 family type III secretion system apparatus protein;protein_id=WP_011257083.1;transl_table=11 NZ_CP047492.1 RefSeq gene 75114 75506 . + . ID=gene-IXO1104_RS00415;Name=IXO1104_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00415;old_locus_tag=IXO1104_00400 NZ_CP047492.1 Protein Homology CDS 75114 75506 . + 0 ID=cds-WP_011407211.1;Parent=gene-IXO1104_RS00415;Dbxref=Genbank:WP_011407211.1;Name=WP_011407211.1;Ontology_term=GO:0030254,GO:0003824,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_function=catalytic activity|0003824||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505147.1;locus_tag=IXO1104_RS00415;product=type III secretion protein HrpB2;protein_id=WP_011407211.1;transl_table=11 NZ_CP047492.1 RefSeq gene 75508 76269 . + . ID=gene-IXO1104_RS00420;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS00420;old_locus_tag=IXO1104_00405 NZ_CP047492.1 Protein Homology CDS 75508 76269 . + 0 ID=cds-WP_011257085.1;Parent=gene-IXO1104_RS00420;Dbxref=Genbank:WP_011257085.1;Name=WP_011257085.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965380.1;locus_tag=IXO1104_RS00420;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_011257085.1;transl_table=11 NZ_CP047492.1 RefSeq gene 76277 76906 . + . ID=gene-IXO1104_RS00425;Name=IXO1104_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00425;old_locus_tag=IXO1104_00410 NZ_CP047492.1 Protein Homology CDS 76277 76906 . + 0 ID=cds-WP_011257086.1;Parent=gene-IXO1104_RS00425;Dbxref=Genbank:WP_011257086.1;Name=WP_011257086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171652.1;locus_tag=IXO1104_RS00425;product=type III secretion protein HrpB4;protein_id=WP_011257086.1;transl_table=11 NZ_CP047492.1 RefSeq gene 76891 77592 . + . ID=gene-IXO1104_RS00430;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=IXO1104_RS00430;old_locus_tag=IXO1104_00415 NZ_CP047492.1 Protein Homology CDS 76891 77592 . + 0 ID=cds-WP_011257087.1;Parent=gene-IXO1104_RS00430;Dbxref=Genbank:WP_011257087.1;Name=WP_011257087.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089143.1;locus_tag=IXO1104_RS00430;product=type III secretion system stator protein SctL;protein_id=WP_011257087.1;transl_table=11 NZ_CP047492.1 RefSeq gene 77582 78910 . + . ID=gene-IXO1104_RS00435;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=IXO1104_RS00435;old_locus_tag=IXO1104_00420 NZ_CP047492.1 Protein Homology CDS 77582 78910 . + 0 ID=cds-WP_011257088.1;Parent=gene-IXO1104_RS00435;Dbxref=Genbank:WP_011257088.1;Name=WP_011257088.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972469.1;locus_tag=IXO1104_RS00435;product=type III secretion system ATPase SctN;protein_id=WP_011257088.1;transl_table=11 NZ_CP047492.1 RefSeq gene 78903 79412 . + . ID=gene-IXO1104_RS00440;Name=IXO1104_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00440;old_locus_tag=IXO1104_00425 NZ_CP047492.1 Protein Homology CDS 78903 79412 . + 0 ID=cds-WP_011257089.1;Parent=gene-IXO1104_RS00440;Dbxref=Genbank:WP_011257089.1;Name=WP_011257089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050300.1;locus_tag=IXO1104_RS00440;product=type III secretion protein HrpB7;protein_id=WP_011257089.1;transl_table=11 NZ_CP047492.1 RefSeq gene 79409 80239 . + . ID=gene-IXO1104_RS00445;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=IXO1104_RS00445;old_locus_tag=IXO1104_00430 NZ_CP047492.1 Protein Homology CDS 79409 80239 . + 0 ID=cds-WP_011257090.1;Parent=gene-IXO1104_RS00445;Dbxref=Genbank:WP_011257090.1;Name=WP_011257090.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089146.1;locus_tag=IXO1104_RS00445;product=type III secretion system export apparatus subunit SctT;protein_id=WP_011257090.1;transl_table=11 NZ_CP047492.1 RefSeq gene 80322 82139 . + . ID=gene-IXO1104_RS00450;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=IXO1104_RS00450;old_locus_tag=IXO1104_00435 NZ_CP047492.1 Protein Homology CDS 80322 82139 . + 0 ID=cds-WP_011257091.1;Parent=gene-IXO1104_RS00450;Dbxref=Genbank:WP_011257091.1;Name=WP_011257091.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972464.1;locus_tag=IXO1104_RS00450;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_011257091.1;transl_table=11 NZ_CP047492.1 RefSeq gene 82878 83309 . - . ID=gene-IXO1104_RS00455;Name=IXO1104_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00455;old_locus_tag=IXO1104_00440 NZ_CP047492.1 Protein Homology CDS 82878 83309 . - 0 ID=cds-WP_044756183.1;Parent=gene-IXO1104_RS00455;Dbxref=Genbank:WP_044756183.1;Name=WP_044756183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257092.1;locus_tag=IXO1104_RS00455;product=hypothetical protein;protein_id=WP_044756183.1;transl_table=11 NZ_CP047492.1 RefSeq gene 83685 84248 . + . ID=gene-IXO1104_RS00460;Name=IXO1104_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00460;old_locus_tag=IXO1104_00445 NZ_CP047492.1 Protein Homology CDS 83685 84248 . + 0 ID=cds-WP_075240255.1;Parent=gene-IXO1104_RS00460;Dbxref=Genbank:WP_075240255.1;Name=WP_075240255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156519.1;locus_tag=IXO1104_RS00460;product=lytic transglycosylase domain-containing protein;protein_id=WP_075240255.1;transl_table=11 NZ_CP047492.1 RefSeq gene 84712 86265 . - . ID=gene-IXO1104_RS00465;Name=IXO1104_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00465;old_locus_tag=IXO1104_00450 NZ_CP047492.1 Protein Homology CDS 84712 86265 . - 0 ID=cds-WP_075240585.1;Parent=gene-IXO1104_RS00465;Dbxref=Genbank:WP_075240585.1;Name=WP_075240585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304790.1;locus_tag=IXO1104_RS00465;product=hypothetical protein;protein_id=WP_075240585.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 87277 88335 . - . ID=gene-IXO1104_RS00470;Name=IXO1104_RS00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00470;old_locus_tag=IXO1104_00455;pseudo=true NZ_CP047492.1 Protein Homology CDS 87277 88335 . - 0 ID=cds-IXO1104_RS00470;Parent=gene-IXO1104_RS00470;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS00470;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 88479 88820 . - . ID=gene-IXO1104_RS00475;Name=IXO1104_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00475;old_locus_tag=IXO1104_00460 NZ_CP047492.1 Protein Homology CDS 88479 88820 . - 0 ID=cds-WP_011257097.1;Parent=gene-IXO1104_RS00475;Dbxref=Genbank:WP_011257097.1;Name=WP_011257097.1;Ontology_term=GO:0044238;gbkey=CDS;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974834.1;locus_tag=IXO1104_RS00475;product=HPF/RaiA family ribosome-associated protein;protein_id=WP_011257097.1;transl_table=11 NZ_CP047492.1 RefSeq gene 89173 91563 . + . ID=gene-IXO1104_RS00480;Name=IXO1104_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00480;old_locus_tag=IXO1104_00465 NZ_CP047492.1 Protein Homology CDS 89173 91563 . + 0 ID=cds-WP_228329731.1;Parent=gene-IXO1104_RS00480;Dbxref=Genbank:WP_228329731.1;Name=WP_228329731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928375.1;locus_tag=IXO1104_RS00480;product=DUF3772 domain-containing protein;protein_id=WP_228329731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 91582 91842 . - . ID=gene-IXO1104_RS00485;Name=IXO1104_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00485;old_locus_tag=IXO1104_00470 NZ_CP047492.1 Protein Homology CDS 91582 91842 . - 0 ID=cds-WP_011407204.1;Parent=gene-IXO1104_RS00485;Dbxref=Genbank:WP_011407204.1;Name=WP_011407204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407204.1;locus_tag=IXO1104_RS00485;product=hypothetical protein;protein_id=WP_011407204.1;transl_table=11 NZ_CP047492.1 RefSeq gene 91902 92665 . + . ID=gene-IXO1104_RS00490;Name=IXO1104_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00490;old_locus_tag=IXO1104_00475 NZ_CP047492.1 Protein Homology CDS 91902 92217 . + 0 ID=cds-WP_094187715.1;Parent=gene-IXO1104_RS00490;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS00490;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 92217 92665 . + 2 ID=cds-WP_094187715.1;Parent=gene-IXO1104_RS00490;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS00490;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 92672 94579 . - . ID=gene-IXO1104_RS00495;Name=IXO1104_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00495;old_locus_tag=IXO1104_00480 NZ_CP047492.1 Protein Homology CDS 92672 94579 . - 0 ID=cds-WP_027703735.1;Parent=gene-IXO1104_RS00495;Dbxref=Genbank:WP_027703735.1;Name=WP_027703735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158895.1;locus_tag=IXO1104_RS00495;product=ABC transporter substrate-binding protein;protein_id=WP_027703735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 94637 95578 . + . ID=gene-IXO1104_RS00500;Name=IXO1104_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00500;old_locus_tag=IXO1104_00485 NZ_CP047492.1 Protein Homology CDS 94637 95578 . + 0 ID=cds-WP_011257102.1;Parent=gene-IXO1104_RS00500;Dbxref=Genbank:WP_011257102.1;Name=WP_011257102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367950.1;locus_tag=IXO1104_RS00500;product=DUF808 domain-containing protein;protein_id=WP_011257102.1;transl_table=11 NZ_CP047492.1 RefSeq gene 95771 97135 . + . ID=gene-IXO1104_RS00505;Name=IXO1104_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00505;old_locus_tag=IXO1104_00490 NZ_CP047492.1 Protein Homology CDS 95771 97135 . + 0 ID=cds-WP_041182540.1;Parent=gene-IXO1104_RS00505;Dbxref=Genbank:WP_041182540.1;Name=WP_041182540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301290.1;locus_tag=IXO1104_RS00505;product=glycoside hydrolase family 10 protein;protein_id=WP_041182540.1;transl_table=11 NZ_CP047492.1 RefSeq gene 97132 98760 . - . ID=gene-IXO1104_RS00510;Name=IXO1104_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00510;old_locus_tag=IXO1104_00495 NZ_CP047492.1 Protein Homology CDS 97132 98760 . - 0 ID=cds-WP_011257104.1;Parent=gene-IXO1104_RS00510;Dbxref=Genbank:WP_011257104.1;Name=WP_011257104.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089156.1;locus_tag=IXO1104_RS00510;product=GGDEF domain-containing protein;protein_id=WP_011257104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 99234 100817 . + . ID=gene-IXO1104_RS00515;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=IXO1104_RS00515;old_locus_tag=IXO1104_00500 NZ_CP047492.1 Protein Homology CDS 99234 100817 . + 0 ID=cds-WP_041182541.1;Parent=gene-IXO1104_RS00515;Dbxref=Genbank:WP_041182541.1;Name=WP_041182541.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575489.1;locus_tag=IXO1104_RS00515;product=glycogen synthase GlgA;protein_id=WP_041182541.1;transl_table=11 NZ_CP047492.1 RefSeq gene 100814 103048 . + . ID=gene-IXO1104_RS00520;Name=IXO1104_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00520;old_locus_tag=IXO1104_00505 NZ_CP047492.1 Protein Homology CDS 100814 103048 . + 0 ID=cds-WP_044756187.1;Parent=gene-IXO1104_RS00520;Dbxref=Genbank:WP_044756187.1;Name=WP_044756187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161584.1;locus_tag=IXO1104_RS00520;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_044756187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 103051 104808 . + . ID=gene-IXO1104_RS00525;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS00525;old_locus_tag=IXO1104_00510 NZ_CP047492.1 Protein Homology CDS 103051 104808 . + 0 ID=cds-WP_011257107.1;Parent=gene-IXO1104_RS00525;Dbxref=Genbank:WP_011257107.1;Name=WP_011257107.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156528.1;locus_tag=IXO1104_RS00525;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_011257107.1;transl_table=11 NZ_CP047492.1 RefSeq gene 104865 106754 . + . ID=gene-IXO1104_RS00530;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS00530;old_locus_tag=IXO1104_00515 NZ_CP047492.1 Protein Homology CDS 104865 106754 . + 0 ID=cds-WP_094187819.1;Parent=gene-IXO1104_RS00530;Dbxref=Genbank:WP_094187819.1;Name=WP_094187819.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997588.1;locus_tag=IXO1104_RS00530;product=4-alpha-glucanotransferase;protein_id=WP_094187819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 106751 109360 . + . ID=gene-IXO1104_RS00535;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=IXO1104_RS00535;old_locus_tag=IXO1104_00520 NZ_CP047492.1 Protein Homology CDS 106751 109360 . + 0 ID=cds-WP_012443627.1;Parent=gene-IXO1104_RS00535;Dbxref=Genbank:WP_012443627.1;Name=WP_012443627.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505122.1;locus_tag=IXO1104_RS00535;product=malto-oligosyltrehalose synthase;protein_id=WP_012443627.1;transl_table=11 NZ_CP047492.1 RefSeq gene 109383 109568 . + . ID=gene-IXO1104_RS00540;Name=IXO1104_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00540;old_locus_tag=IXO1104_00525 NZ_CP047492.1 Protein Homology CDS 109383 109568 . + 0 ID=cds-WP_011407199.1;Parent=gene-IXO1104_RS00540;Dbxref=Genbank:WP_011407199.1;Name=WP_011407199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158479.1;locus_tag=IXO1104_RS00540;product=DUF2934 domain-containing protein;protein_id=WP_011407199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 109683 111845 . + . ID=gene-IXO1104_RS00545;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=IXO1104_RS00545;old_locus_tag=IXO1104_00530 NZ_CP047492.1 Protein Homology CDS 109683 111845 . + 0 ID=cds-WP_011257110.1;Parent=gene-IXO1104_RS00545;Dbxref=Genbank:WP_011257110.1;Name=WP_011257110.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382022.1;locus_tag=IXO1104_RS00545;product=glycogen debranching protein GlgX;protein_id=WP_011257110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 111862 112494 . + . ID=gene-IXO1104_RS00550;Name=IXO1104_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00550;old_locus_tag=IXO1104_00535 NZ_CP047492.1 Protein Homology CDS 111862 112494 . + 0 ID=cds-WP_027703730.1;Parent=gene-IXO1104_RS00550;Dbxref=Genbank:WP_027703730.1;Name=WP_027703730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301281.1;locus_tag=IXO1104_RS00550;product=NAD(P)H-binding protein;protein_id=WP_027703730.1;transl_table=11 NZ_CP047492.1 RefSeq gene 112658 113155 . + . ID=gene-IXO1104_RS00555;Name=IXO1104_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00555;old_locus_tag=IXO1104_00540 NZ_CP047492.1 GeneMarkS-2+ CDS 112658 113155 . + 0 ID=cds-WP_075244499.1;Parent=gene-IXO1104_RS00555;Dbxref=Genbank:WP_075244499.1;Name=WP_075244499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00555;product=hypothetical protein;protein_id=WP_075244499.1;transl_table=11 NZ_CP047492.1 RefSeq gene 113207 113283 . + . ID=gene-IXO1104_RS00560;Name=IXO1104_RS00560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS00560;old_locus_tag=IXO1104_00545 NZ_CP047492.1 cmsearch ncRNA 113207 113283 . + . ID=rna-IXO1104_RS00560;Parent=gene-IXO1104_RS00560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00560;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 113207 113283 . + . ID=exon-IXO1104_RS00560-1;Parent=rna-IXO1104_RS00560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00560;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 113296 114342 . - . ID=gene-IXO1104_RS00565;Name=IXO1104_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00565;old_locus_tag=IXO1104_00550 NZ_CP047492.1 Protein Homology CDS 113296 114342 . - 0 ID=cds-WP_011407197.1;Parent=gene-IXO1104_RS00565;Dbxref=Genbank:WP_011407197.1;Name=WP_011407197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449750.1;locus_tag=IXO1104_RS00565;product=methylamine utilization protein;protein_id=WP_011407197.1;transl_table=11 NZ_CP047492.1 RefSeq gene 114460 115779 . - . ID=gene-IXO1104_RS00570;Name=IXO1104_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00570;old_locus_tag=IXO1104_00555 NZ_CP047492.1 Protein Homology CDS 114460 115779 . - 0 ID=cds-WP_155297135.1;Parent=gene-IXO1104_RS00570;Dbxref=Genbank:WP_155297135.1;Name=WP_155297135.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS00570;product=IS701 family transposase;protein_id=WP_155297135.1;transl_table=11 NZ_CP047492.1 RefSeq gene 116198 117163 . - . ID=gene-IXO1104_RS00575;Name=IXO1104_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00575;old_locus_tag=IXO1104_00560 NZ_CP047492.1 Protein Homology CDS 116198 117163 . - 0 ID=cds-WP_115862254.1;Parent=gene-IXO1104_RS00575;Dbxref=Genbank:WP_115862254.1;Name=WP_115862254.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS00575;product=IS1595 family transposase;protein_id=WP_115862254.1;transl_table=11 NZ_CP047492.1 RefSeq gene 117261 118271 . + . ID=gene-IXO1104_RS00580;Name=IXO1104_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00580;old_locus_tag=IXO1104_00565 NZ_CP047492.1 Protein Homology CDS 117261 118271 . + 0 ID=cds-WP_080256641.1;Parent=gene-IXO1104_RS00580;Dbxref=Genbank:WP_080256641.1;Name=WP_080256641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017411.2;locus_tag=IXO1104_RS00580;product=RHS repeat protein;protein_id=WP_080256641.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 118351 118631 . + . ID=gene-IXO1104_RS00585;Name=IXO1104_RS00585;end_range=118631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00585;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 118351 118631 . + 0 ID=cds-IXO1104_RS00585;Parent=gene-IXO1104_RS00585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=118631,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01643.1;locus_tag=IXO1104_RS00585;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 119335 120654 . + . ID=gene-IXO1104_RS00590;Name=IXO1104_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00590 NZ_CP047492.1 Protein Homology CDS 119335 120654 . + 0 ID=cds-WP_263117929.1;Parent=gene-IXO1104_RS00590;Dbxref=Genbank:WP_263117929.1;Name=WP_263117929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS00590;product=IS701 family transposase;protein_id=WP_263117929.1;transl_table=11 NZ_CP047492.1 RefSeq gene 120770 121228 . + . ID=gene-IXO1104_RS00595;Name=IXO1104_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00595;old_locus_tag=IXO1104_00575 NZ_CP047492.1 Protein Homology CDS 120770 121228 . + 0 ID=cds-WP_080496167.1;Parent=gene-IXO1104_RS00595;Dbxref=Genbank:WP_080496167.1;Name=WP_080496167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=IXO1104_RS00595;product=polymorphic toxin type 37 domain-containing protein;protein_id=WP_080496167.1;transl_table=11 NZ_CP047492.1 RefSeq gene 121228 121560 . + . ID=gene-IXO1104_RS00600;Name=IXO1104_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00600;old_locus_tag=IXO1104_00580 NZ_CP047492.1 GeneMarkS-2+ CDS 121228 121560 . + 0 ID=cds-WP_027704081.1;Parent=gene-IXO1104_RS00600;Dbxref=Genbank:WP_027704081.1;Name=WP_027704081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00600;product=hypothetical protein;protein_id=WP_027704081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 121577 121837 . + . ID=gene-IXO1104_RS00605;Name=IXO1104_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00605;old_locus_tag=IXO1104_00585 NZ_CP047492.1 Protein Homology CDS 121577 121837 . + 0 ID=cds-WP_011257122.1;Parent=gene-IXO1104_RS00605;Dbxref=Genbank:WP_011257122.1;Name=WP_011257122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257122.1;locus_tag=IXO1104_RS00605;product=hypothetical protein;protein_id=WP_011257122.1;transl_table=11 NZ_CP047492.1 RefSeq gene 122661 122783 . - . ID=gene-IXO1104_RS00610;Name=IXO1104_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00610 NZ_CP047492.1 GeneMarkS-2+ CDS 122661 122783 . - 0 ID=cds-WP_263117781.1;Parent=gene-IXO1104_RS00610;Dbxref=Genbank:WP_263117781.1;Name=WP_263117781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00610;product=hypothetical protein;protein_id=WP_263117781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 122788 124002 . - . ID=gene-IXO1104_RS00615;Name=IXO1104_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00615;old_locus_tag=IXO1104_00590 NZ_CP047492.1 Protein Homology CDS 122788 124002 . - 0 ID=cds-WP_011407913.1;Parent=gene-IXO1104_RS00615;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS00615;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 124027 124236 . - . ID=gene-IXO1104_RS00620;Name=IXO1104_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00620;old_locus_tag=IXO1104_00595 NZ_CP047492.1 GeneMarkS-2+ CDS 124027 124236 . - 0 ID=cds-WP_164994092.1;Parent=gene-IXO1104_RS00620;Dbxref=Genbank:WP_164994092.1;Name=WP_164994092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS00620;product=hypothetical protein;protein_id=WP_164994092.1;transl_table=11 NZ_CP047492.1 RefSeq gene 124514 125923 . + . ID=gene-IXO1104_RS00625;Name=IXO1104_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00625;old_locus_tag=IXO1104_00600 NZ_CP047492.1 Protein Homology CDS 124514 125923 . + 0 ID=cds-WP_024743401.1;Parent=gene-IXO1104_RS00625;Dbxref=Genbank:WP_024743401.1;Name=WP_024743401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901659.1;locus_tag=IXO1104_RS00625;product=FAD/NAD(P)-binding protein;protein_id=WP_024743401.1;transl_table=11 NZ_CP047492.1 RefSeq gene 126272 126703 . + . ID=gene-IXO1104_RS00630;Name=IXO1104_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00630;old_locus_tag=IXO1104_00605 NZ_CP047492.1 Protein Homology CDS 126272 126703 . + 0 ID=cds-WP_011407187.1;Parent=gene-IXO1104_RS00630;Dbxref=Genbank:WP_011407187.1;Name=WP_011407187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156537.1;locus_tag=IXO1104_RS00630;product=VirK family protein;protein_id=WP_011407187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 126978 127313 . + . ID=gene-IXO1104_RS00635;Name=IXO1104_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00635;old_locus_tag=IXO1104_00610 NZ_CP047492.1 Protein Homology CDS 126978 127313 . + 0 ID=cds-WP_012443638.1;Parent=gene-IXO1104_RS00635;Dbxref=Genbank:WP_012443638.1;Name=WP_012443638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301442.1;locus_tag=IXO1104_RS00635;product=DUF6172 family protein;protein_id=WP_012443638.1;transl_table=11 NZ_CP047492.1 RefSeq gene 127753 129042 . - . ID=gene-IXO1104_RS00640;Name=IXO1104_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00640;old_locus_tag=IXO1104_00615 NZ_CP047492.1 Protein Homology CDS 127753 129042 . - 0 ID=cds-WP_011407184.1;Parent=gene-IXO1104_RS00640;Dbxref=Genbank:WP_011407184.1;Name=WP_011407184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035678.1;locus_tag=IXO1104_RS00640;product=DEAD/DEAH box helicase;protein_id=WP_011407184.1;transl_table=11 NZ_CP047492.1 RefSeq gene 129050 129301 . - . ID=gene-IXO1104_RS00645;Name=IXO1104_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00645;old_locus_tag=IXO1104_00620 NZ_CP047492.1 Protein Homology CDS 129050 129301 . - 0 ID=cds-WP_012443640.1;Parent=gene-IXO1104_RS00645;Dbxref=Genbank:WP_012443640.1;Name=WP_012443640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501667.1;locus_tag=IXO1104_RS00645;product=hypothetical protein;protein_id=WP_012443640.1;transl_table=11 NZ_CP047492.1 RefSeq gene 129661 130648 . + . ID=gene-IXO1104_RS00650;Name=IXO1104_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00650;old_locus_tag=IXO1104_00625 NZ_CP047492.1 Protein Homology CDS 129661 130146 . + 0 ID=cds-WP_143701122.1;Parent=gene-IXO1104_RS00650;Dbxref=Genbank:WP_143701122.1;Name=WP_143701122.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1104_RS00650;product=IS5 family transposase;protein_id=WP_143701122.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 130148 130648 . + 0 ID=cds-WP_143701122.1;Parent=gene-IXO1104_RS00650;Dbxref=Genbank:WP_143701122.1;Name=WP_143701122.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1104_RS00650;product=IS5 family transposase;protein_id=WP_143701122.1;transl_table=11 NZ_CP047492.1 RefSeq gene 130826 131437 . + . ID=gene-IXO1104_RS00655;Name=IXO1104_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00655 NZ_CP047492.1 Protein Homology CDS 130826 131437 . + 0 ID=cds-WP_228329674.1;Parent=gene-IXO1104_RS00655;Dbxref=Genbank:WP_228329674.1;Name=WP_228329674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501669.1;locus_tag=IXO1104_RS00655;product=type III effector protein XopW;protein_id=WP_228329674.1;transl_table=11 NZ_CP047492.1 RefSeq gene 131394 131621 . + . ID=gene-IXO1104_RS00660;Name=IXO1104_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00660;old_locus_tag=IXO1104_00635 NZ_CP047492.1 Protein Homology CDS 131394 131621 . + 0 ID=cds-WP_228383578.1;Parent=gene-IXO1104_RS00660;Dbxref=Genbank:WP_228383578.1;Name=WP_228383578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501670.1;locus_tag=IXO1104_RS00660;product=hypothetical protein;protein_id=WP_228383578.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 131675 132001 . - . ID=gene-IXO1104_RS00665;Name=IXO1104_RS00665;end_range=132001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00665;old_locus_tag=IXO1104_00640;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 131675 132001 . - 0 ID=cds-IXO1104_RS00665;Parent=gene-IXO1104_RS00665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016746;end_range=132001,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050323.1;locus_tag=IXO1104_RS00665;partial=true;product=2-oxo acid dehydrogenase subunit E2;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 131997 132962 . - . ID=gene-IXO1104_RS00670;Name=IXO1104_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00670;old_locus_tag=IXO1104_00645 NZ_CP047492.1 Protein Homology CDS 131997 132962 . - 0 ID=cds-WP_133265413.1;Parent=gene-IXO1104_RS00670;Dbxref=Genbank:WP_133265413.1;Name=WP_133265413.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS00670;product=IS1595 family transposase;protein_id=WP_133265413.1;transl_table=11 NZ_CP047492.1 RefSeq gene 133193 133555 . - . ID=gene-IXO1104_RS00675;Name=IXO1104_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00675;old_locus_tag=IXO1104_00650 NZ_CP047492.1 Protein Homology CDS 133193 133555 . - 0 ID=cds-WP_229002669.1;Parent=gene-IXO1104_RS00675;Dbxref=Genbank:WP_229002669.1;Name=WP_229002669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407242.1;locus_tag=IXO1104_RS00675;product=SymE family type I addiction module toxin;protein_id=WP_229002669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 133897 134268 . - . ID=gene-IXO1104_RS00680;Name=IXO1104_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00680;old_locus_tag=IXO1104_00660 NZ_CP047492.1 Protein Homology CDS 133897 134268 . - 0 ID=cds-WP_011257150.1;Parent=gene-IXO1104_RS00680;Dbxref=Genbank:WP_011257150.1;Name=WP_011257150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257150.1;locus_tag=IXO1104_RS00680;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011257150.1;transl_table=11 NZ_CP047492.1 RefSeq gene 134322 134552 . - . ID=gene-IXO1104_RS00685;Name=IXO1104_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00685;old_locus_tag=IXO1104_00665 NZ_CP047492.1 Protein Homology CDS 134322 134552 . - 0 ID=cds-WP_011407243.1;Parent=gene-IXO1104_RS00685;Dbxref=Genbank:WP_011407243.1;Name=WP_011407243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443656.1;locus_tag=IXO1104_RS00685;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_011407243.1;transl_table=11 NZ_CP047492.1 RefSeq gene 134619 135281 . - . ID=gene-IXO1104_RS00690;Name=IXO1104_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00690;old_locus_tag=IXO1104_00670 NZ_CP047492.1 Protein Homology CDS 134619 135281 . - 0 ID=cds-WP_011407244.1;Parent=gene-IXO1104_RS00690;Dbxref=Genbank:WP_011407244.1;Name=WP_011407244.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158077.1;locus_tag=IXO1104_RS00690;product=hemolysin III family protein;protein_id=WP_011407244.1;transl_table=11 NZ_CP047492.1 RefSeq gene 135459 137954 . + . ID=gene-IXO1104_RS00695;Name=IXO1104_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00695;old_locus_tag=IXO1104_00675 NZ_CP047492.1 Protein Homology CDS 135459 137954 . + 0 ID=cds-WP_041181908.1;Parent=gene-IXO1104_RS00695;Dbxref=Genbank:WP_041181908.1;Name=WP_041181908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237057.1;locus_tag=IXO1104_RS00695;product=DEAD/DEAH box helicase;protein_id=WP_041181908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 137951 139777 . + . ID=gene-IXO1104_RS00700;Name=IXO1104_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00700;old_locus_tag=IXO1104_00680 NZ_CP047492.1 Protein Homology CDS 137951 139777 . + 0 ID=cds-WP_011257154.1;Parent=gene-IXO1104_RS00700;Dbxref=Genbank:WP_011257154.1;Name=WP_011257154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501376.1;locus_tag=IXO1104_RS00700;product=ribonuclease H-like domain-containing protein;protein_id=WP_011257154.1;transl_table=11 NZ_CP047492.1 RefSeq gene 140266 142410 . - . ID=gene-IXO1104_RS00705;Name=IXO1104_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00705;old_locus_tag=IXO1104_00685 NZ_CP047492.1 Protein Homology CDS 140266 142410 . - 0 ID=cds-WP_011407248.1;Parent=gene-IXO1104_RS00705;Dbxref=Genbank:WP_011407248.1;Name=WP_011407248.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964871.1;locus_tag=IXO1104_RS00705;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_011407248.1;transl_table=11 NZ_CP047492.1 RefSeq gene 142601 143758 . - . ID=gene-IXO1104_RS00710;Name=IXO1104_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00710;old_locus_tag=IXO1104_00690 NZ_CP047492.1 Protein Homology CDS 142601 143758 . - 0 ID=cds-WP_011407249.1;Parent=gene-IXO1104_RS00710;Dbxref=Genbank:WP_011407249.1;Name=WP_011407249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158073.1;locus_tag=IXO1104_RS00710;product=ROK family protein;protein_id=WP_011407249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 143862 146519 . + . ID=gene-IXO1104_RS00715;Name=IXO1104_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00715;old_locus_tag=IXO1104_00695 NZ_CP047492.1 Protein Homology CDS 143862 146519 . + 0 ID=cds-WP_027703671.1;Parent=gene-IXO1104_RS00715;Dbxref=Genbank:WP_027703671.1;Name=WP_027703671.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407250.1;locus_tag=IXO1104_RS00715;product=TonB-dependent receptor;protein_id=WP_027703671.1;transl_table=11 NZ_CP047492.1 RefSeq gene 146530 147315 . + . ID=gene-IXO1104_RS00720;Name=IXO1104_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00720;old_locus_tag=IXO1104_00700 NZ_CP047492.1 Protein Homology CDS 146530 147315 . + 0 ID=cds-WP_011257157.1;Parent=gene-IXO1104_RS00720;Dbxref=Genbank:WP_011257157.1;Name=WP_011257157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158072.1;locus_tag=IXO1104_RS00720;product=DUF1868 domain-containing protein;protein_id=WP_011257157.1;transl_table=11 NZ_CP047492.1 RefSeq gene 147629 148819 . - . ID=gene-IXO1104_RS00725;Name=IXO1104_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00725;old_locus_tag=IXO1104_00705 NZ_CP047492.1 Protein Homology CDS 147629 148819 . - 0 ID=cds-WP_027703672.1;Parent=gene-IXO1104_RS00725;Dbxref=Genbank:WP_027703672.1;Name=WP_027703672.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257158.1;locus_tag=IXO1104_RS00725;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_027703672.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 148865 149261 . - . ID=gene-IXO1104_RS00730;Name=IXO1104_RS00730;end_range=149261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00730;old_locus_tag=IXO1104_00710;partial=true;pseudo=true;start_range=.,148865 NZ_CP047492.1 Protein Homology CDS 148865 149261 . - 0 ID=cds-IXO1104_RS00730;Parent=gene-IXO1104_RS00730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=149261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170093.1;locus_tag=IXO1104_RS00730;partial=true;product=hypothetical protein;pseudo=true;start_range=.,148865;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 149377 149541 . + . ID=gene-IXO1104_RS00735;Name=IXO1104_RS00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00735;old_locus_tag=IXO1104_00715;partial=true;pseudo=true;start_range=.,149377 NZ_CP047492.1 Protein Homology CDS 149377 149541 . + 0 ID=cds-IXO1104_RS00735;Parent=gene-IXO1104_RS00735;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572908.1;locus_tag=IXO1104_RS00735;partial=true;product=NmrA/HSCARG family protein;pseudo=true;start_range=.,149377;transl_table=11 NZ_CP047492.1 RefSeq gene 149919 150224 . + . ID=gene-IXO1104_RS00740;Name=IXO1104_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00740;old_locus_tag=IXO1104_00720 NZ_CP047492.1 Protein Homology CDS 149919 150224 . + 0 ID=cds-WP_011407253.1;Parent=gene-IXO1104_RS00740;Dbxref=Genbank:WP_011407253.1;Name=WP_011407253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901594.1;locus_tag=IXO1104_RS00740;product=hypothetical protein;protein_id=WP_011407253.1;transl_table=11 NZ_CP047492.1 RefSeq gene 150442 151695 . - . ID=gene-IXO1104_RS00745;Name=IXO1104_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00745;old_locus_tag=IXO1104_00725 NZ_CP047492.1 Protein Homology CDS 150442 151695 . - 0 ID=cds-WP_075240511.1;Parent=gene-IXO1104_RS00745;Dbxref=Genbank:WP_075240511.1;Name=WP_075240511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171852.1;locus_tag=IXO1104_RS00745;product=DNA topoisomerase IB;protein_id=WP_075240511.1;transl_table=11 NZ_CP047492.1 RefSeq gene 151752 152132 . + . ID=gene-IXO1104_RS00750;Name=IXO1104_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00750;old_locus_tag=IXO1104_00730 NZ_CP047492.1 Protein Homology CDS 151752 152132 . + 0 ID=cds-WP_011257161.1;Parent=gene-IXO1104_RS00750;Dbxref=Genbank:WP_011257161.1;Name=WP_011257161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159672.1;locus_tag=IXO1104_RS00750;product=I78 family peptidase inhibitor;protein_id=WP_011257161.1;transl_table=11 NZ_CP047492.1 RefSeq gene 152334 156806 . + . ID=gene-IXO1104_RS00755;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=IXO1104_RS00755;old_locus_tag=IXO1104_00735 NZ_CP047492.1 Protein Homology CDS 152334 156806 . + 0 ID=cds-WP_011257162.1;Parent=gene-IXO1104_RS00755;Dbxref=Genbank:WP_011257162.1;Name=WP_011257162.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237055.1;locus_tag=IXO1104_RS00755;product=glutamate synthase large subunit;protein_id=WP_011257162.1;transl_table=11 NZ_CP047492.1 RefSeq gene 157001 158482 . + . ID=gene-IXO1104_RS00760;Name=IXO1104_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00760;old_locus_tag=IXO1104_00740 NZ_CP047492.1 Protein Homology CDS 157001 158482 . + 0 ID=cds-WP_011257163.1;Parent=gene-IXO1104_RS00760;Dbxref=Genbank:WP_011257163.1;Name=WP_011257163.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912482.1;locus_tag=IXO1104_RS00760;product=FAD-dependent oxidoreductase;protein_id=WP_011257163.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 158725 159099 . + . ID=gene-IXO1104_RS00765;Name=IXO1104_RS00765;end_range=159099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00765;old_locus_tag=IXO1104_00745;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 158725 159099 . + 0 ID=cds-IXO1104_RS00765;Parent=gene-IXO1104_RS00765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=159099,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1;locus_tag=IXO1104_RS00765;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 159178 159711 . + . ID=gene-IXO1104_RS00770;Name=IXO1104_RS00770;end_range=159711,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00770;old_locus_tag=IXO1104_00750;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 159178 159711 . + 0 ID=cds-IXO1104_RS00770;Parent=gene-IXO1104_RS00770;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=159711,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS00770;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 159720 160755 . - . ID=gene-IXO1104_RS00775;Name=IXO1104_RS00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00775;old_locus_tag=IXO1104_00755;pseudo=true NZ_CP047492.1 Protein Homology CDS 159720 160755 . - 0 ID=cds-IXO1104_RS00775;Parent=gene-IXO1104_RS00775;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS00775;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 160845 161300 . + . ID=gene-IXO1104_RS00780;Name=IXO1104_RS00780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00780;old_locus_tag=IXO1104_00760;partial=true;pseudo=true;start_range=.,160845 NZ_CP047492.1 Protein Homology CDS 160845 161300 . + 0 ID=cds-IXO1104_RS00780;Parent=gene-IXO1104_RS00780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS00780;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,160845;transl_table=11 NZ_CP047492.1 RefSeq gene 161281 162165 . + . ID=gene-IXO1104_RS00785;Name=IXO1104_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00785;old_locus_tag=IXO1104_00765 NZ_CP047492.1 Protein Homology CDS 161281 162165 . + 0 ID=cds-WP_011257169.1;Parent=gene-IXO1104_RS00785;Dbxref=Genbank:WP_011257169.1;Name=WP_011257169.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS00785;product=IS4 family transposase;protein_id=WP_011257169.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 162189 162329 . - . ID=gene-IXO1104_RS00790;Name=IXO1104_RS00790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00790;partial=true;pseudo=true;start_range=.,162189 NZ_CP047492.1 Protein Homology CDS 162189 162329 . - 0 ID=cds-IXO1104_RS00790;Parent=gene-IXO1104_RS00790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS00790;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,162189;transl_table=11 NZ_CP047492.1 RefSeq gene 162377 163753 . - . ID=gene-IXO1104_RS00795;Name=IXO1104_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00795;old_locus_tag=IXO1104_00770 NZ_CP047492.1 Protein Homology CDS 162377 163753 . - 0 ID=cds-WP_133265458.1;Parent=gene-IXO1104_RS00795;Dbxref=Genbank:WP_133265458.1;Name=WP_133265458.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS00795;product=IS5 family transposase;protein_id=WP_133265458.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 164080 164753 . - . ID=gene-IXO1104_RS00800;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=pseudogene;locus_tag=IXO1104_RS00800;old_locus_tag=IXO1104_00775;partial=true;pseudo=true;start_range=.,164080 NZ_CP047492.1 Protein Homology CDS 164080 164753 . - 0 ID=cds-IXO1104_RS00800;Parent=gene-IXO1104_RS00800;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991266.1;locus_tag=IXO1104_RS00800;partial=true;product=5-dehydro-4-deoxy-D-glucuronate isomerase;pseudo=true;start_range=.,164080;transl_table=11 NZ_CP047492.1 RefSeq gene 165155 166213 . - . ID=gene-IXO1104_RS00805;Name=IXO1104_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00805;old_locus_tag=IXO1104_00780 NZ_CP047492.1 Protein Homology CDS 165155 166213 . - 0 ID=cds-WP_027703863.1;Parent=gene-IXO1104_RS00805;Dbxref=Genbank:WP_027703863.1;Name=WP_027703863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158097.1;locus_tag=IXO1104_RS00805;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_027703863.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 166357 166895 . - . ID=gene-IXO1104_RS00810;Name=IXO1104_RS00810;end_range=166895,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00810;old_locus_tag=IXO1104_00790;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 166357 166895 . - 0 ID=cds-IXO1104_RS00810;Parent=gene-IXO1104_RS00810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=166895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345889.1;locus_tag=IXO1104_RS00810;partial=true;product=xylosidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 166894 167025 . + . ID=gene-IXO1104_RS00815;Name=IXO1104_RS00815;end_range=167025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00815;old_locus_tag=IXO1104_00795;partial=true;pseudo=true;start_range=.,166894 NZ_CP047492.1 Protein Homology CDS 166894 167025 . + 0 ID=cds-IXO1104_RS00815;Parent=gene-IXO1104_RS00815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=167025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912119.1;locus_tag=IXO1104_RS00815;partial=true;product=carboxylesterase family protein;pseudo=true;start_range=.,166894;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 167132 167574 . - . ID=gene-IXO1104_RS00820;Name=IXO1104_RS00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00820;old_locus_tag=IXO1104_00800;pseudo=true NZ_CP047492.1 Protein Homology CDS 167132 167574 . - 0 ID=cds-IXO1104_RS00820;Parent=gene-IXO1104_RS00820;Note=frameshifted;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=IXO1104_RS00820;product=YfcE family phosphodiesterase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 167778 169961 . - . ID=gene-IXO1104_RS00825;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=IXO1104_RS00825;old_locus_tag=IXO1104_00805 NZ_CP047492.1 Protein Homology CDS 167778 169961 . - 0 ID=cds-WP_042464354.1;Parent=gene-IXO1104_RS00825;Dbxref=Genbank:WP_042464354.1;Name=WP_042464354.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302960.1;locus_tag=IXO1104_RS00825;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_042464354.1;transl_table=11 NZ_CP047492.1 RefSeq gene 169973 173323 . - . ID=gene-IXO1104_RS00830;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=IXO1104_RS00830;old_locus_tag=IXO1104_00810 NZ_CP047492.1 Protein Homology CDS 169973 173323 . - 0 ID=cds-WP_069960129.1;Parent=gene-IXO1104_RS00830;Dbxref=Genbank:WP_069960129.1;Name=WP_069960129.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501461.1;locus_tag=IXO1104_RS00830;product=maltose alpha-D-glucosyltransferase;protein_id=WP_069960129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 173320 176436 . - . ID=gene-IXO1104_RS00835;Name=IXO1104_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00835;old_locus_tag=IXO1104_00815 NZ_CP047492.1 Protein Homology CDS 173320 176436 . - 0 ID=cds-WP_011257178.1;Parent=gene-IXO1104_RS00835;Dbxref=Genbank:WP_011257178.1;Name=WP_011257178.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574465.1;locus_tag=IXO1104_RS00835;product=DUF3416 domain-containing protein;protein_id=WP_011257178.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 177197 178024 . - . ID=gene-IXO1104_RS00840;Name=IXO1104_RS00840;end_range=178024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00840;old_locus_tag=IXO1104_00820;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 177197 178024 . - 0 ID=cds-IXO1104_RS00840;Parent=gene-IXO1104_RS00840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=178024,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1104_RS00840;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 178113 178301 . + . ID=gene-IXO1104_RS00845;Name=IXO1104_RS00845;end_range=178301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00845;old_locus_tag=IXO1104_00825;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 178113 178301 . + 0 ID=cds-IXO1104_RS00845;Parent=gene-IXO1104_RS00845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=178301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS00845;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 178390 179190 . + . ID=gene-IXO1104_RS00850;Name=IXO1104_RS00850;end_range=179190,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00850;old_locus_tag=IXO1104_00830;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 178390 179190 . + 0 ID=cds-IXO1104_RS00850;Parent=gene-IXO1104_RS00850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=179190,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS00850;partial=true;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 179396 180715 . - . ID=gene-IXO1104_RS00855;Name=IXO1104_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00855;old_locus_tag=IXO1104_00835 NZ_CP047492.1 Protein Homology CDS 179396 180715 . - 0 ID=cds-WP_151420504.1;Parent=gene-IXO1104_RS00855;Dbxref=Genbank:WP_151420504.1;Name=WP_151420504.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS00855;product=IS701 family transposase;protein_id=WP_151420504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 180915 181883 . - . ID=gene-IXO1104_RS00860;Name=IXO1104_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00860;old_locus_tag=IXO1104_00840 NZ_CP047492.1 Protein Homology CDS 180915 181883 . - 0 ID=cds-WP_011258802.1;Parent=gene-IXO1104_RS00860;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS00860;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 182033 183352 . - . ID=gene-IXO1104_RS00865;Name=IXO1104_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00865;old_locus_tag=IXO1104_00845 NZ_CP047492.1 Protein Homology CDS 182033 183352 . - 0 ID=cds-WP_117231488.1;Parent=gene-IXO1104_RS00865;Dbxref=Genbank:WP_117231488.1;Name=WP_117231488.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS00865;product=IS701 family transposase;protein_id=WP_117231488.1;transl_table=11 NZ_CP047492.1 RefSeq gene 183596 183709 . + . ID=gene-IXO1104_RS00870;Name=IXO1104_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00870;old_locus_tag=IXO1104_00855 NZ_CP047492.1 Protein Homology CDS 183596 183709 . + 0 ID=cds-WP_012443686.1;Parent=gene-IXO1104_RS00870;Dbxref=Genbank:WP_012443686.1;Name=WP_012443686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=IXO1104_RS00870;product=hemagglutinin repeat-containing protein;protein_id=WP_012443686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 183792 185267 . + . ID=gene-IXO1104_RS00875;Name=IXO1104_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00875;old_locus_tag=IXO1104_00860 NZ_CP047492.1 Protein Homology CDS 183792 185267 . + 0 ID=cds-WP_069959772.1;Parent=gene-IXO1104_RS00875;Dbxref=Genbank:WP_069959772.1;Name=WP_069959772.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS00875;product=IS5 family transposase;protein_id=WP_069959772.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 185406 186782 . + . ID=gene-IXO1104_RS00880;Name=IXO1104_RS00880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00880;old_locus_tag=IXO1104_00865;pseudo=true NZ_CP047492.1 Protein Homology CDS 185406 186782 . + 0 ID=cds-IXO1104_RS00880;Parent=gene-IXO1104_RS00880;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS00880;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 186876 188396 . - . ID=gene-IXO1104_RS00885;Name=IXO1104_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00885;old_locus_tag=IXO1104_00870 NZ_CP047492.1 Protein Homology CDS 186876 188396 . - 0 ID=cds-WP_012443690.1;Parent=gene-IXO1104_RS00885;Dbxref=Genbank:WP_012443690.1;Name=WP_012443690.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989245.1;locus_tag=IXO1104_RS00885;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_012443690.1;transl_table=11 NZ_CP047492.1 RefSeq gene 188413 188691 . - . ID=gene-IXO1104_RS00890;Name=IXO1104_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00890;old_locus_tag=IXO1104_00875 NZ_CP047492.1 Protein Homology CDS 188413 188691 . - 0 ID=cds-WP_011257185.1;Parent=gene-IXO1104_RS00890;Dbxref=Genbank:WP_011257185.1;Name=WP_011257185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156738.1;locus_tag=IXO1104_RS00890;product=accessory factor UbiK family protein;protein_id=WP_011257185.1;transl_table=11 NZ_CP047492.1 RefSeq gene 188881 189219 . + . ID=gene-IXO1104_RS00895;Name=IXO1104_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00895;old_locus_tag=IXO1104_00880 NZ_CP047492.1 Protein Homology CDS 188881 189219 . + 0 ID=cds-WP_011257186.1;Parent=gene-IXO1104_RS00895;Dbxref=Genbank:WP_011257186.1;Name=WP_011257186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1;locus_tag=IXO1104_RS00895;product=P-II family nitrogen regulator;protein_id=WP_011257186.1;transl_table=11 NZ_CP047492.1 RefSeq gene 189832 191817 . + . ID=gene-IXO1104_RS00900;Name=IXO1104_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00900;old_locus_tag=IXO1104_00885 NZ_CP047492.1 Protein Homology CDS 189832 191817 . + 0 ID=cds-WP_012443692.1;Parent=gene-IXO1104_RS00900;Dbxref=Genbank:WP_012443692.1;Name=WP_012443692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471473.1;locus_tag=IXO1104_RS00900;product=beta-N-acetylglucosaminidase domain-containing protein;protein_id=WP_012443692.1;transl_table=11 NZ_CP047492.1 RefSeq gene 191874 191950 . - . ID=gene-IXO1104_RS00905;Name=IXO1104_RS00905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS00905;old_locus_tag=IXO1104_00890 NZ_CP047492.1 cmsearch ncRNA 191874 191950 . - . ID=rna-IXO1104_RS00905;Parent=gene-IXO1104_RS00905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00905;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 191874 191950 . - . ID=exon-IXO1104_RS00905-1;Parent=rna-IXO1104_RS00905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS00905;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 191943 192179 . - . ID=gene-IXO1104_RS00910;Name=IXO1104_RS00910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00910;old_locus_tag=IXO1104_00895;partial=true;pseudo=true;start_range=.,191943 NZ_CP047492.1 Protein Homology CDS 191943 192179 . - 0 ID=cds-IXO1104_RS00910;Parent=gene-IXO1104_RS00910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156740.1;locus_tag=IXO1104_RS00910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,191943;transl_table=11 NZ_CP047492.1 RefSeq gene 192449 193411 . + . ID=gene-IXO1104_RS00915;Name=IXO1104_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00915;old_locus_tag=IXO1104_00900 NZ_CP047492.1 Protein Homology CDS 192449 193411 . + 0 ID=cds-WP_011409560.1-2;Parent=gene-IXO1104_RS00915;Dbxref=Genbank:WP_011409560.1;Name=WP_011409560.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS00915;product=IS1595 family transposase;protein_id=WP_011409560.1;transl_table=11 NZ_CP047492.1 RefSeq gene 193821 194633 . + . ID=gene-IXO1104_RS00920;Name=IXO1104_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00920;old_locus_tag=IXO1104_00905 NZ_CP047492.1 Protein Homology CDS 193821 194633 . + 0 ID=cds-WP_011257188.1;Parent=gene-IXO1104_RS00920;Dbxref=Genbank:WP_011257188.1;Name=WP_011257188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171970.1;locus_tag=IXO1104_RS00920;product=outer membrane beta-barrel protein;protein_id=WP_011257188.1;transl_table=11 NZ_CP047492.1 RefSeq gene 194826 195437 . + . ID=gene-IXO1104_RS00925;Name=IXO1104_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00925;old_locus_tag=IXO1104_00910 NZ_CP047492.1 Protein Homology CDS 194826 195437 . + 0 ID=cds-WP_011257189.1;Parent=gene-IXO1104_RS00925;Dbxref=Genbank:WP_011257189.1;Name=WP_011257189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305069.1;locus_tag=IXO1104_RS00925;product=PH domain-containing protein;protein_id=WP_011257189.1;transl_table=11 NZ_CP047492.1 RefSeq gene 195854 196711 . - . ID=gene-IXO1104_RS00930;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=IXO1104_RS00930;old_locus_tag=IXO1104_00915 NZ_CP047492.1 Protein Homology CDS 195854 196711 . - 0 ID=cds-WP_011257190.1;Parent=gene-IXO1104_RS00930;Dbxref=Genbank:WP_011257190.1;Name=WP_011257190.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305070.1;locus_tag=IXO1104_RS00930;product=polyamine aminopropyltransferase;protein_id=WP_011257190.1;transl_table=11 NZ_CP047492.1 RefSeq gene 196949 198835 . + . ID=gene-IXO1104_RS00935;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=IXO1104_RS00935;old_locus_tag=IXO1104_00920 NZ_CP047492.1 Protein Homology CDS 196949 198835 . + 0 ID=cds-WP_012443696.1;Parent=gene-IXO1104_RS00935;Dbxref=Genbank:WP_012443696.1;Name=WP_012443696.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038943.1;locus_tag=IXO1104_RS00935;product=arginine decarboxylase;protein_id=WP_012443696.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 199408 200762 . + . ID=gene-IXO1104_RS00940;Name=IXO1104_RS00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS00940;old_locus_tag=IXO1104_00925;pseudo=true NZ_CP047492.1 Protein Homology CDS 199408 200762 . + 0 ID=cds-IXO1104_RS00940;Parent=gene-IXO1104_RS00940;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS00940;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 201167 203890 . + . ID=gene-IXO1104_RS00945;Name=IXO1104_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00945;old_locus_tag=IXO1104_00930 NZ_CP047492.1 Protein Homology CDS 201167 203890 . + 0 ID=cds-WP_164994093.1;Parent=gene-IXO1104_RS00945;Dbxref=Genbank:WP_164994093.1;Name=WP_164994093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=IXO1104_RS00945;product=type VI secretion system tip protein VgrG;protein_id=WP_164994093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 203958 206111 . + . ID=gene-IXO1104_RS00950;Name=IXO1104_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00950;old_locus_tag=IXO1104_00935 NZ_CP047492.1 Protein Homology CDS 203958 206111 . + 0 ID=cds-WP_041182356.1;Parent=gene-IXO1104_RS00950;Dbxref=Genbank:WP_041182356.1;Name=WP_041182356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407286.1;locus_tag=IXO1104_RS00950;product=DUF3274 domain-containing protein;protein_id=WP_041182356.1;transl_table=11 NZ_CP047492.1 RefSeq gene 206108 207799 . + . ID=gene-IXO1104_RS00955;Name=IXO1104_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00955;old_locus_tag=IXO1104_00940 NZ_CP047492.1 Protein Homology CDS 206108 207799 . + 0 ID=cds-WP_011257195.1;Parent=gene-IXO1104_RS00955;Dbxref=Genbank:WP_011257195.1;Name=WP_011257195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257195.1;locus_tag=IXO1104_RS00955;product=DUF2875 family protein;protein_id=WP_011257195.1;transl_table=11 NZ_CP047492.1 RefSeq gene 207796 207942 . + . ID=gene-IXO1104_RS00960;Name=IXO1104_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00960 NZ_CP047492.1 Protein Homology CDS 207796 207942 . + 0 ID=cds-WP_012443701.1;Parent=gene-IXO1104_RS00960;Dbxref=Genbank:WP_012443701.1;Name=WP_012443701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504125.1;locus_tag=IXO1104_RS00960;product=membrane protein;protein_id=WP_012443701.1;transl_table=11 NZ_CP047492.1 RefSeq gene 207932 208213 . + . ID=gene-IXO1104_RS00965;Name=IXO1104_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00965 NZ_CP047492.1 Protein Homology CDS 207932 208213 . + 0 ID=cds-WP_229002670.1;Parent=gene-IXO1104_RS00965;Dbxref=Genbank:WP_229002670.1;Name=WP_229002670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=IXO1104_RS00965;product=hypothetical protein;protein_id=WP_229002670.1;transl_table=11 NZ_CP047492.1 RefSeq gene 208333 210237 . - . ID=gene-IXO1104_RS00970;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=IXO1104_RS00970;old_locus_tag=IXO1104_00950 NZ_CP047492.1 Protein Homology CDS 208333 210237 . - 0 ID=cds-WP_012443704.1;Parent=gene-IXO1104_RS00970;Dbxref=Genbank:WP_012443704.1;Name=WP_012443704.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1;locus_tag=IXO1104_RS00970;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_012443704.1;transl_table=11 NZ_CP047492.1 RefSeq gene 210498 210677 . - . ID=gene-IXO1104_RS00975;Name=IXO1104_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00975;old_locus_tag=IXO1104_00955 NZ_CP047492.1 Protein Homology CDS 210498 210677 . - 0 ID=cds-WP_075239321.1;Parent=gene-IXO1104_RS00975;Dbxref=Genbank:WP_075239321.1;Name=WP_075239321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485698.1;locus_tag=IXO1104_RS00975;product=hypothetical protein;protein_id=WP_075239321.1;transl_table=11 NZ_CP047492.1 RefSeq gene 210811 211278 . - . ID=gene-IXO1104_RS00980;Name=IXO1104_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00980;old_locus_tag=IXO1104_00960 NZ_CP047492.1 Protein Homology CDS 210811 211278 . - 0 ID=cds-WP_011407290.1;Parent=gene-IXO1104_RS00980;Dbxref=Genbank:WP_011407290.1;Name=WP_011407290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171656.1;locus_tag=IXO1104_RS00980;product=hypothetical protein;protein_id=WP_011407290.1;transl_table=11 NZ_CP047492.1 RefSeq gene 211436 212395 . + . ID=gene-IXO1104_RS00985;Name=IXO1104_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00985;old_locus_tag=IXO1104_00965 NZ_CP047492.1 Protein Homology CDS 211436 212395 . + 0 ID=cds-WP_011257199.1;Parent=gene-IXO1104_RS00985;Dbxref=Genbank:WP_011257199.1;Name=WP_011257199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920032.1;locus_tag=IXO1104_RS00985;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_011257199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 212380 212997 . + . ID=gene-IXO1104_RS00990;Name=IXO1104_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00990;old_locus_tag=IXO1104_00970 NZ_CP047492.1 Protein Homology CDS 212380 212997 . + 0 ID=cds-WP_011407291.1;Parent=gene-IXO1104_RS00990;Dbxref=Genbank:WP_011407291.1;Name=WP_011407291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912742.1;locus_tag=IXO1104_RS00990;product=YdcF family protein;protein_id=WP_011407291.1;transl_table=11 NZ_CP047492.1 RefSeq gene 213040 213459 . + . ID=gene-IXO1104_RS00995;Name=IXO1104_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS00995;old_locus_tag=IXO1104_00975 NZ_CP047492.1 Protein Homology CDS 213040 213459 . + 0 ID=cds-WP_011257200.1;Parent=gene-IXO1104_RS00995;Dbxref=Genbank:WP_011257200.1;Name=WP_011257200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903249.1;locus_tag=IXO1104_RS00995;product=nuclear transport factor 2 family protein;protein_id=WP_011257200.1;transl_table=11 NZ_CP047492.1 RefSeq gene 213712 214617 . - . ID=gene-IXO1104_RS01000;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=IXO1104_RS01000;old_locus_tag=IXO1104_00980 NZ_CP047492.1 Protein Homology CDS 213712 214617 . - 0 ID=cds-WP_012443706.1;Parent=gene-IXO1104_RS01000;Dbxref=Genbank:WP_012443706.1;Name=WP_012443706.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443706.1;locus_tag=IXO1104_RS01000;product=lipid A hydroxylase LpxO;protein_id=WP_012443706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 214866 215750 . - . ID=gene-IXO1104_RS01005;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=IXO1104_RS01005;old_locus_tag=IXO1104_00985 NZ_CP047492.1 Protein Homology CDS 214866 215750 . - 0 ID=cds-WP_011257202.1;Parent=gene-IXO1104_RS01005;Dbxref=Genbank:WP_011257202.1;Name=WP_011257202.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485708.1;locus_tag=IXO1104_RS01005;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_011257202.1;transl_table=11 NZ_CP047492.1 RefSeq gene 215814 216596 . - . ID=gene-IXO1104_RS01010;Name=IXO1104_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01010;old_locus_tag=IXO1104_00990 NZ_CP047492.1 Protein Homology CDS 215814 216596 . - 0 ID=cds-WP_011257203.1;Parent=gene-IXO1104_RS01010;Dbxref=Genbank:WP_011257203.1;Name=WP_011257203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509285.1;locus_tag=IXO1104_RS01010;product=SDR family oxidoreductase;protein_id=WP_011257203.1;transl_table=11 NZ_CP047492.1 RefSeq gene 216641 217402 . - . ID=gene-IXO1104_RS01015;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=IXO1104_RS01015;old_locus_tag=IXO1104_00995 NZ_CP047492.1 Protein Homology CDS 216641 217402 . - 0 ID=cds-WP_011407292.1;Parent=gene-IXO1104_RS01015;Dbxref=Genbank:WP_011407292.1;Name=WP_011407292.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=IXO1104_RS01015;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_011407292.1;transl_table=11 NZ_CP047492.1 RefSeq gene 217566 217943 . - . ID=gene-IXO1104_RS01020;Name=IXO1104_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01020;old_locus_tag=IXO1104_01000 NZ_CP047492.1 Protein Homology CDS 217566 217943 . - 0 ID=cds-WP_027703523.1;Parent=gene-IXO1104_RS01020;Dbxref=Genbank:WP_027703523.1;Name=WP_027703523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912732.1;locus_tag=IXO1104_RS01020;product=hypothetical protein;protein_id=WP_027703523.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 217937 218137 . + . ID=gene-IXO1104_RS01025;Name=IXO1104_RS01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01025;old_locus_tag=IXO1104_01005;partial=true;pseudo=true;start_range=.,217937 NZ_CP047492.1 Protein Homology CDS 217937 218137 . + 0 ID=cds-IXO1104_RS01025;Parent=gene-IXO1104_RS01025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1104_RS01025;partial=true;product=transposase;pseudo=true;start_range=.,217937;transl_table=11 NZ_CP047492.1 RefSeq gene 218214 219305 . + . ID=gene-IXO1104_RS01030;Name=IXO1104_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01030;old_locus_tag=IXO1104_01010 NZ_CP047492.1 Protein Homology CDS 218214 219305 . + 0 ID=cds-WP_011407293.1;Parent=gene-IXO1104_RS01030;Dbxref=Genbank:WP_011407293.1;Name=WP_011407293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112451.1;locus_tag=IXO1104_RS01030;product=DUF4380 domain-containing protein;protein_id=WP_011407293.1;transl_table=11 NZ_CP047492.1 RefSeq gene 219374 220972 . + . ID=gene-IXO1104_RS01035;Name=IXO1104_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01035;old_locus_tag=IXO1104_01015 NZ_CP047492.1 Protein Homology CDS 219374 220972 . + 0 ID=cds-WP_011407294.1;Parent=gene-IXO1104_RS01035;Dbxref=Genbank:WP_011407294.1;Name=WP_011407294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407294.1;locus_tag=IXO1104_RS01035;product=glucan biosynthesis protein D;protein_id=WP_011407294.1;transl_table=11 NZ_CP047492.1 RefSeq gene 221137 222381 . - . ID=gene-IXO1104_RS01040;Name=IXO1104_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01040;old_locus_tag=IXO1104_01020 NZ_CP047492.1 Protein Homology CDS 221137 222381 . - 0 ID=cds-WP_011407295.1;Parent=gene-IXO1104_RS01040;Dbxref=Genbank:WP_011407295.1;Name=WP_011407295.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155166.1;locus_tag=IXO1104_RS01040;product=GAF domain-containing protein;protein_id=WP_011407295.1;transl_table=11 NZ_CP047492.1 RefSeq gene 222833 223462 . - . ID=gene-IXO1104_RS01045;Name=IXO1104_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01045;old_locus_tag=IXO1104_01025 NZ_CP047492.1 Protein Homology CDS 222833 223462 . - 0 ID=cds-WP_011257210.1;Parent=gene-IXO1104_RS01045;Dbxref=Genbank:WP_011257210.1;Name=WP_011257210.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374599.1;locus_tag=IXO1104_RS01045;product=thymidine kinase;protein_id=WP_011257210.1;transl_table=11 NZ_CP047492.1 RefSeq gene 223669 225645 . + . ID=gene-IXO1104_RS01050;Name=IXO1104_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01050;old_locus_tag=IXO1104_01030 NZ_CP047492.1 Protein Homology CDS 223669 225645 . + 0 ID=cds-WP_075239962.1;Parent=gene-IXO1104_RS01050;Dbxref=Genbank:WP_075239962.1;Name=WP_075239962.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1;locus_tag=IXO1104_RS01050;product=UvrD-helicase domain-containing protein;protein_id=WP_075239962.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 225723 226024 . + . ID=gene-IXO1104_RS01055;Name=IXO1104_RS01055;end_range=226024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01055;old_locus_tag=IXO1104_01035;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 225723 226024 . + 0 ID=cds-IXO1104_RS01055;Parent=gene-IXO1104_RS01055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=226024,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374593.1;locus_tag=IXO1104_RS01055;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 226145 226729 . + . ID=gene-IXO1104_RS01060;Name=IXO1104_RS01060;end_range=226729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01060;old_locus_tag=IXO1104_01040;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 226145 226729 . + 0 ID=cds-IXO1104_RS01060;Parent=gene-IXO1104_RS01060;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=226729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155171.1;locus_tag=IXO1104_RS01060;partial=true;product=DUF4272 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 227032 227697 . - . ID=gene-IXO1104_RS01065;Name=IXO1104_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01065;old_locus_tag=IXO1104_01045 NZ_CP047492.1 Protein Homology CDS 227032 227697 . - 0 ID=cds-WP_011407298.1;Parent=gene-IXO1104_RS01065;Dbxref=Genbank:WP_011407298.1;Name=WP_011407298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374589.1;locus_tag=IXO1104_RS01065;product=DUF480 domain-containing protein;protein_id=WP_011407298.1;transl_table=11 NZ_CP047492.1 RefSeq gene 228021 228980 . + . ID=gene-IXO1104_RS01070;Name=IXO1104_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01070;old_locus_tag=IXO1104_01050 NZ_CP047492.1 Protein Homology CDS 228021 228980 . + 0 ID=cds-WP_205412093.1;Parent=gene-IXO1104_RS01070;Dbxref=Genbank:WP_205412093.1;Name=WP_205412093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159717.1;locus_tag=IXO1104_RS01070;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_205412093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 228977 229708 . + . ID=gene-IXO1104_RS01075;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=IXO1104_RS01075;old_locus_tag=IXO1104_01055 NZ_CP047492.1 Protein Homology CDS 228977 229708 . + 0 ID=cds-WP_011257215.1;Parent=gene-IXO1104_RS01075;Dbxref=Genbank:WP_011257215.1;Name=WP_011257215.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505335.1;locus_tag=IXO1104_RS01075;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_011257215.1;transl_table=11 NZ_CP047492.1 RefSeq gene 230062 231591 . - . ID=gene-IXO1104_RS01080;Name=IXO1104_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01080;old_locus_tag=IXO1104_01060 NZ_CP047492.1 Protein Homology CDS 230062 231591 . - 0 ID=cds-WP_012443718.1;Parent=gene-IXO1104_RS01080;Dbxref=Genbank:WP_012443718.1;Name=WP_012443718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443718.1;locus_tag=IXO1104_RS01080;product=tryptophan 7-halogenase;protein_id=WP_012443718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 231701 234733 . - . ID=gene-IXO1104_RS01085;Name=IXO1104_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01085;old_locus_tag=IXO1104_01065 NZ_CP047492.1 Protein Homology CDS 231701 234733 . - 0 ID=cds-WP_011407300.1;Parent=gene-IXO1104_RS01085;Dbxref=Genbank:WP_011407300.1;Name=WP_011407300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171731.1;locus_tag=IXO1104_RS01085;product=TonB-dependent receptor;protein_id=WP_011407300.1;transl_table=11 NZ_CP047492.1 RefSeq gene 235032 238070 . - . ID=gene-IXO1104_RS01090;Name=IXO1104_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01090;old_locus_tag=IXO1104_01070 NZ_CP047492.1 Protein Homology CDS 235032 238070 . - 0 ID=cds-WP_012443720.1;Parent=gene-IXO1104_RS01090;Dbxref=Genbank:WP_012443720.1;Name=WP_012443720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171975.1;locus_tag=IXO1104_RS01090;product=TonB-dependent receptor;protein_id=WP_012443720.1;transl_table=11 NZ_CP047492.1 RefSeq gene 238235 239287 . - . ID=gene-IXO1104_RS01095;Name=IXO1104_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01095;old_locus_tag=IXO1104_01075 NZ_CP047492.1 Protein Homology CDS 238235 239287 . - 0 ID=cds-WP_011257219.1;Parent=gene-IXO1104_RS01095;Dbxref=Genbank:WP_011257219.1;Name=WP_011257219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505331.1;locus_tag=IXO1104_RS01095;product=LacI family transcriptional regulator;protein_id=WP_011257219.1;transl_table=11 NZ_CP047492.1 RefSeq gene 239456 239701 . - . ID=gene-IXO1104_RS01100;Name=IXO1104_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01100;old_locus_tag=IXO1104_01080 NZ_CP047492.1 GeneMarkS-2+ CDS 239456 239701 . - 0 ID=cds-WP_075240491.1;Parent=gene-IXO1104_RS01100;Dbxref=Genbank:WP_075240491.1;Name=WP_075240491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01100;product=hypothetical protein;protein_id=WP_075240491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 239700 240665 . + . ID=gene-IXO1104_RS01105;Name=IXO1104_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01105;old_locus_tag=IXO1104_01085 NZ_CP047492.1 Protein Homology CDS 239700 240665 . + 0 ID=cds-WP_011407301.1;Parent=gene-IXO1104_RS01105;Dbxref=Genbank:WP_011407301.1;Name=WP_011407301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377011.1;locus_tag=IXO1104_RS01105;product=hypothetical protein;protein_id=WP_011407301.1;transl_table=11 NZ_CP047492.1 RefSeq gene 240665 243325 . + . ID=gene-IXO1104_RS01110;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS01110;old_locus_tag=IXO1104_01090 NZ_CP047492.1 Protein Homology CDS 240665 243325 . + 0 ID=cds-WP_011257221.1;Parent=gene-IXO1104_RS01110;Dbxref=Genbank:WP_011257221.1;Name=WP_011257221.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257221.1;locus_tag=IXO1104_RS01110;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_011257221.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 243525 244505 . + . ID=gene-IXO1104_RS01115;Name=IXO1104_RS01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01115;old_locus_tag=IXO1104_01095;pseudo=true NZ_CP047492.1 Protein Homology CDS 243525 244505 . + 0 ID=cds-IXO1104_RS01115;Parent=gene-IXO1104_RS01115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932469.1;locus_tag=IXO1104_RS01115;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 245144 245347 . - . ID=gene-IXO1104_RS01120;Name=IXO1104_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01120;old_locus_tag=IXO1104_01100 NZ_CP047492.1 Protein Homology CDS 245144 245347 . - 0 ID=cds-WP_008573820.1;Parent=gene-IXO1104_RS01120;Dbxref=Genbank:WP_008573820.1;Name=WP_008573820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573820.1;locus_tag=IXO1104_RS01120;product=YdcH family protein;protein_id=WP_008573820.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 245500 245814 . + . ID=gene-IXO1104_RS01125;Name=IXO1104_RS01125;end_range=245814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01125;old_locus_tag=IXO1104_01105;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 245500 245814 . + 0 ID=cds-IXO1104_RS01125;Parent=gene-IXO1104_RS01125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=245814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573822.1;locus_tag=IXO1104_RS01125;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 245941 246983 . + . ID=gene-IXO1104_RS01130;Name=IXO1104_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01130;old_locus_tag=IXO1104_01110 NZ_CP047492.1 Protein Homology CDS 245941 246136 . + 0 ID=cds-WP_229002760.1;Parent=gene-IXO1104_RS01130;Dbxref=Genbank:WP_229002760.1;Name=WP_229002760.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS01130;product=IS3 family transposase;protein_id=WP_229002760.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 246136 246983 . + 2 ID=cds-WP_229002760.1;Parent=gene-IXO1104_RS01130;Dbxref=Genbank:WP_229002760.1;Name=WP_229002760.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS01130;product=IS3 family transposase;protein_id=WP_229002760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 247314 247673 . + . ID=gene-IXO1104_RS01135;Name=IXO1104_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01135 NZ_CP047492.1 Protein Homology CDS 247314 247673 . + 0 ID=cds-WP_256723776.1;Parent=gene-IXO1104_RS01135;Dbxref=Genbank:WP_256723776.1;Name=WP_256723776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026241.2;locus_tag=IXO1104_RS01135;product=M91 family zinc metallopeptidase;protein_id=WP_256723776.1;transl_table=11 NZ_CP047492.1 RefSeq gene 247760 247954 . + . ID=gene-IXO1104_RS01140;Name=IXO1104_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01140 NZ_CP047492.1 Protein Homology CDS 247760 247954 . + 0 ID=cds-WP_256723777.1;Parent=gene-IXO1104_RS01140;Dbxref=Genbank:WP_256723777.1;Name=WP_256723777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026241.2;locus_tag=IXO1104_RS01140;product=M91 family zinc metallopeptidase;protein_id=WP_256723777.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 248306 249682 . + . ID=gene-IXO1104_RS01145;Name=IXO1104_RS01145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01145;old_locus_tag=IXO1104_01120;pseudo=true NZ_CP047492.1 Protein Homology CDS 248306 249682 . + 0 ID=cds-IXO1104_RS01145;Parent=gene-IXO1104_RS01145;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1104_RS01145;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 249706 250671 . - . ID=gene-IXO1104_RS01150;Name=IXO1104_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01150;old_locus_tag=IXO1104_01125 NZ_CP047492.1 Protein Homology CDS 249706 250671 . - 0 ID=cds-WP_109182027.1;Parent=gene-IXO1104_RS01150;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS01150;product=IS1595 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 251350 252387 . - . ID=gene-IXO1104_RS01155;Name=IXO1104_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01155;old_locus_tag=IXO1104_01130 NZ_CP047492.1 Protein Homology CDS 251350 252387 . - 0 ID=cds-WP_012443726.1;Parent=gene-IXO1104_RS01155;Dbxref=Genbank:WP_012443726.1;Name=WP_012443726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409779.1;locus_tag=IXO1104_RS01155;product=patatin-like phospholipase family protein;protein_id=WP_012443726.1;transl_table=11 NZ_CP047492.1 RefSeq gene 252895 253905 . - . ID=gene-IXO1104_RS01160;Name=IXO1104_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01160;old_locus_tag=IXO1104_01135 NZ_CP047492.1 Protein Homology CDS 252895 253905 . - 0 ID=cds-WP_011260790.1;Parent=gene-IXO1104_RS01160;Dbxref=Genbank:WP_011260790.1;Name=WP_011260790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912141.1;locus_tag=IXO1104_RS01160;product=TIGR00266 family protein;protein_id=WP_011260790.1;transl_table=11 NZ_CP047492.1 RefSeq gene 254094 254939 . - . ID=gene-IXO1104_RS01165;Name=IXO1104_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01165;old_locus_tag=IXO1104_01140 NZ_CP047492.1 Protein Homology CDS 254094 254939 . - 0 ID=cds-WP_011409777.1;Parent=gene-IXO1104_RS01165;Dbxref=Genbank:WP_011409777.1;Name=WP_011409777.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159607.1;locus_tag=IXO1104_RS01165;product=ATP-binding cassette domain-containing protein;protein_id=WP_011409777.1;transl_table=11 NZ_CP047492.1 RefSeq gene 255099 256304 . + . ID=gene-IXO1104_RS01170;Name=IXO1104_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01170;old_locus_tag=IXO1104_01145 NZ_CP047492.1 Protein Homology CDS 255099 256304 . + 0 ID=cds-WP_011260788.1;Parent=gene-IXO1104_RS01170;Dbxref=Genbank:WP_011260788.1;Name=WP_011260788.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379811.1;locus_tag=IXO1104_RS01170;product=fatty acid desaturase;protein_id=WP_011260788.1;transl_table=11 NZ_CP047492.1 RefSeq gene 256357 256689 . + . ID=gene-IXO1104_RS01175;Name=IXO1104_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01175;old_locus_tag=IXO1104_01150 NZ_CP047492.1 Protein Homology CDS 256357 256689 . + 0 ID=cds-WP_011409775.1;Parent=gene-IXO1104_RS01175;Dbxref=Genbank:WP_011409775.1;Name=WP_011409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901217.1;locus_tag=IXO1104_RS01175;product=EF-hand domain-containing protein;protein_id=WP_011409775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 256738 257475 . + . ID=gene-IXO1104_RS01180;Name=IXO1104_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01180;old_locus_tag=IXO1104_01155 NZ_CP047492.1 Protein Homology CDS 256738 257475 . + 0 ID=cds-WP_011409774.1;Parent=gene-IXO1104_RS01180;Dbxref=Genbank:WP_011409774.1;Name=WP_011409774.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992662.1;locus_tag=IXO1104_RS01180;product=ATP-binding cassette domain-containing protein;protein_id=WP_011409774.1;transl_table=11 NZ_CP047492.1 RefSeq gene 257472 258944 . + . ID=gene-IXO1104_RS01185;Name=IXO1104_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01185;old_locus_tag=IXO1104_01160 NZ_CP047492.1 Protein Homology CDS 257472 258944 . + 0 ID=cds-WP_027704185.1;Parent=gene-IXO1104_RS01185;Dbxref=Genbank:WP_027704185.1;Name=WP_027704185.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370723.1;locus_tag=IXO1104_RS01185;product=ABC transporter permease subunit;protein_id=WP_027704185.1;transl_table=11 NZ_CP047492.1 RefSeq gene 259231 260412 . - . ID=gene-IXO1104_RS01190;Name=IXO1104_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01190;old_locus_tag=IXO1104_01165 NZ_CP047492.1 Protein Homology CDS 259231 260412 . - 0 ID=cds-WP_011260784.1;Parent=gene-IXO1104_RS01190;Dbxref=Genbank:WP_011260784.1;Name=WP_011260784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501482.1;locus_tag=IXO1104_RS01190;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_011260784.1;transl_table=11 NZ_CP047492.1 RefSeq gene 260484 261767 . + . ID=gene-IXO1104_RS01195;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=IXO1104_RS01195;old_locus_tag=IXO1104_01170 NZ_CP047492.1 Protein Homology CDS 260484 261767 . + 0 ID=cds-WP_011409772.1;Parent=gene-IXO1104_RS01195;Dbxref=Genbank:WP_011409772.1;Name=WP_011409772.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050153.1;locus_tag=IXO1104_RS01195;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_011409772.1;transl_table=11 NZ_CP047492.1 RefSeq gene 261764 262750 . + . ID=gene-IXO1104_RS01200;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=IXO1104_RS01200;old_locus_tag=IXO1104_01175 NZ_CP047492.1 Protein Homology CDS 261764 262750 . + 0 ID=cds-WP_012443732.1;Parent=gene-IXO1104_RS01200;Dbxref=Genbank:WP_012443732.1;Name=WP_012443732.1;Ontology_term=GO:0052699,GO:0030745;gbkey=CDS;gene=egtD;go_function=dimethylhistidine N-methyltransferase activity|0030745||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157360.1;locus_tag=IXO1104_RS01200;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_012443732.1;transl_table=11 NZ_CP047492.1 RefSeq gene 262795 264072 . - . ID=gene-IXO1104_RS01205;Name=IXO1104_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01205;old_locus_tag=IXO1104_01180 NZ_CP047492.1 Protein Homology CDS 262795 264072 . - 0 ID=cds-WP_011260781.1;Parent=gene-IXO1104_RS01205;Dbxref=Genbank:WP_011260781.1;Name=WP_011260781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501485.1;locus_tag=IXO1104_RS01205;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_011260781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 264069 264689 . - . ID=gene-IXO1104_RS01210;Name=IXO1104_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01210;old_locus_tag=IXO1104_01185 NZ_CP047492.1 Protein Homology CDS 264069 264689 . - 0 ID=cds-WP_011260780.1;Parent=gene-IXO1104_RS01210;Dbxref=Genbank:WP_011260780.1;Name=WP_011260780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260780.1;locus_tag=IXO1104_RS01210;product=helix-turn-helix transcriptional regulator;protein_id=WP_011260780.1;transl_table=11 NZ_CP047492.1 RefSeq gene 264832 268539 . - . ID=gene-IXO1104_RS01215;Name=IXO1104_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01215;old_locus_tag=IXO1104_01190 NZ_CP047492.1 Protein Homology CDS 264832 268539 . - 0 ID=cds-WP_012443733.1;Parent=gene-IXO1104_RS01215;Dbxref=Genbank:WP_012443733.1;Name=WP_012443733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488440.1;locus_tag=IXO1104_RS01215;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_012443733.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 268734 269369 . + . ID=gene-IXO1104_RS01220;Name=IXO1104_RS01220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01220;pseudo=true NZ_CP047492.1 Protein Homology CDS 268734 269369 . + 0 ID=cds-IXO1104_RS01220;Parent=gene-IXO1104_RS01220;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571529.1;locus_tag=IXO1104_RS01220;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 269631 270548 . + . ID=gene-IXO1104_RS01225;Name=IXO1104_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01225;old_locus_tag=IXO1104_01205 NZ_CP047492.1 Protein Homology CDS 269631 270548 . + 0 ID=cds-WP_011260776.1;Parent=gene-IXO1104_RS01225;Dbxref=Genbank:WP_011260776.1;Name=WP_011260776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088991.1;locus_tag=IXO1104_RS01225;product=AEC family transporter;protein_id=WP_011260776.1;transl_table=11 NZ_CP047492.1 RefSeq gene 270901 271533 . + . ID=gene-IXO1104_RS01230;Name=IXO1104_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01230;old_locus_tag=IXO1104_01210 NZ_CP047492.1 Protein Homology CDS 270901 271533 . + 0 ID=cds-WP_011409768.1;Parent=gene-IXO1104_RS01230;Dbxref=Genbank:WP_011409768.1;Name=WP_011409768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159611.1;locus_tag=IXO1104_RS01230;product=ParA family protein;protein_id=WP_011409768.1;transl_table=11 NZ_CP047492.1 RefSeq gene 271549 272025 . + . ID=gene-IXO1104_RS01235;Name=IXO1104_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01235;old_locus_tag=IXO1104_01215 NZ_CP047492.1 Protein Homology CDS 271549 272025 . + 0 ID=cds-WP_027704183.1;Parent=gene-IXO1104_RS01235;Dbxref=Genbank:WP_027704183.1;Name=WP_027704183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1;locus_tag=IXO1104_RS01235;product=histidine phosphatase family protein;protein_id=WP_027704183.1;transl_table=11 NZ_CP047492.1 RefSeq gene 272029 272601 . + . ID=gene-IXO1104_RS01240;Name=IXO1104_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01240;old_locus_tag=IXO1104_01220 NZ_CP047492.1 Protein Homology CDS 272029 272601 . + 0 ID=cds-WP_011260773.1;Parent=gene-IXO1104_RS01240;Dbxref=Genbank:WP_011260773.1;Name=WP_011260773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488454.1;locus_tag=IXO1104_RS01240;product=YceI family protein;protein_id=WP_011260773.1;transl_table=11 NZ_CP047492.1 RefSeq gene 272598 274613 . + . ID=gene-IXO1104_RS01245;Name=IXO1104_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01245;old_locus_tag=IXO1104_01225 NZ_CP047492.1 Protein Homology CDS 272598 274613 . + 0 ID=cds-WP_011260772.1;Parent=gene-IXO1104_RS01245;Dbxref=Genbank:WP_011260772.1;Name=WP_011260772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921165.1;locus_tag=IXO1104_RS01245;product=phospholipase D family protein;protein_id=WP_011260772.1;transl_table=11 NZ_CP047492.1 RefSeq gene 274912 275340 . + . ID=gene-IXO1104_RS01250;Name=IXO1104_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01250;old_locus_tag=IXO1104_01230 NZ_CP047492.1 Protein Homology CDS 274912 275340 . + 0 ID=cds-WP_011260771.1;Parent=gene-IXO1104_RS01250;Dbxref=Genbank:WP_011260771.1;Name=WP_011260771.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157352.1;locus_tag=IXO1104_RS01250;product=hotdog fold thioesterase;protein_id=WP_011260771.1;transl_table=11 NZ_CP047492.1 RefSeq gene 275460 276263 . + . ID=gene-IXO1104_RS01255;Name=IXO1104_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01255;old_locus_tag=IXO1104_01235 NZ_CP047492.1 Protein Homology CDS 275460 276263 . + 0 ID=cds-WP_011409766.1;Parent=gene-IXO1104_RS01255;Dbxref=Genbank:WP_011409766.1;Name=WP_011409766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912162.1;locus_tag=IXO1104_RS01255;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_011409766.1;transl_table=11 NZ_CP047492.1 RefSeq gene 276323 277312 . + . ID=gene-IXO1104_RS01260;Name=IXO1104_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01260;old_locus_tag=IXO1104_01240 NZ_CP047492.1 Protein Homology CDS 276323 277312 . + 0 ID=cds-WP_011260769.1;Parent=gene-IXO1104_RS01260;Dbxref=Genbank:WP_011260769.1;Name=WP_011260769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300655.1;locus_tag=IXO1104_RS01260;product=alpha/beta fold hydrolase;protein_id=WP_011260769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 277726 279798 . + . ID=gene-IXO1104_RS01265;Name=IXO1104_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01265;old_locus_tag=IXO1104_01250 NZ_CP047492.1 Protein Homology CDS 277726 279798 . + 0 ID=cds-WP_011409765.1;Parent=gene-IXO1104_RS01265;Dbxref=Genbank:WP_011409765.1;Name=WP_011409765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237114.1;locus_tag=IXO1104_RS01265;product=tetratricopeptide repeat protein;protein_id=WP_011409765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 279993 280604 . + . ID=gene-IXO1104_RS01270;Name=IXO1104_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01270;old_locus_tag=IXO1104_01255 NZ_CP047492.1 Protein Homology CDS 279993 280604 . + 0 ID=cds-WP_011409764.1;Parent=gene-IXO1104_RS01270;Dbxref=Genbank:WP_011409764.1;Name=WP_011409764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157349.1;locus_tag=IXO1104_RS01270;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_011409764.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 280688 281693 . + . ID=gene-IXO1104_RS01275;Name=IXO1104_RS01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01275;old_locus_tag=IXO1104_01260;pseudo=true NZ_CP047492.1 Protein Homology CDS 280688 281693 . + 0 ID=cds-IXO1104_RS01275;Parent=gene-IXO1104_RS01275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157348.1;locus_tag=IXO1104_RS01275;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 281758 282564 . - . ID=gene-IXO1104_RS01280;Name=IXO1104_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01280;old_locus_tag=IXO1104_01265 NZ_CP047492.1 Protein Homology CDS 281758 282564 . - 0 ID=cds-WP_011260766.1;Parent=gene-IXO1104_RS01280;Dbxref=Genbank:WP_011260766.1;Name=WP_011260766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930695.1;locus_tag=IXO1104_RS01280;product=META domain-containing protein;protein_id=WP_011260766.1;transl_table=11 NZ_CP047492.1 RefSeq gene 282701 283498 . - . ID=gene-IXO1104_RS01285;Name=IXO1104_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01285;old_locus_tag=IXO1104_01270 NZ_CP047492.1 Protein Homology CDS 282701 283498 . - 0 ID=cds-WP_011260765.1;Parent=gene-IXO1104_RS01285;Dbxref=Genbank:WP_011260765.1;Name=WP_011260765.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300661.1;locus_tag=IXO1104_RS01285;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_011260765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 283720 285129 . + . ID=gene-IXO1104_RS01290;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=IXO1104_RS01290;old_locus_tag=IXO1104_01275 NZ_CP047492.1 Protein Homology CDS 283720 285129 . + 0 ID=cds-WP_011260764.1;Parent=gene-IXO1104_RS01290;Dbxref=Genbank:WP_011260764.1;Name=WP_011260764.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=IXO1104_RS01290;product=type I glutamate--ammonia ligase;protein_id=WP_011260764.1;transl_table=11 NZ_CP047492.1 RefSeq gene 285406 285744 . + . ID=gene-IXO1104_RS01295;Name=IXO1104_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01295;old_locus_tag=IXO1104_01280 NZ_CP047492.1 Protein Homology CDS 285406 285744 . + 0 ID=cds-WP_011260763.1;Parent=gene-IXO1104_RS01295;Dbxref=Genbank:WP_011260763.1;Name=WP_011260763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654695.1;locus_tag=IXO1104_RS01295;product=P-II family nitrogen regulator;protein_id=WP_011260763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 285767 287209 . + . ID=gene-IXO1104_RS01300;Name=IXO1104_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01300;old_locus_tag=IXO1104_01285 NZ_CP047492.1 Protein Homology CDS 285767 287209 . + 0 ID=cds-WP_027704182.1;Parent=gene-IXO1104_RS01300;Dbxref=Genbank:WP_027704182.1;Name=WP_027704182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237112.1;locus_tag=IXO1104_RS01300;product=ammonium transporter;protein_id=WP_027704182.1;transl_table=11 NZ_CP047492.1 RefSeq gene 287480 288535 . + . ID=gene-IXO1104_RS01305;Name=IXO1104_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01305;old_locus_tag=IXO1104_01290 NZ_CP047492.1 Protein Homology CDS 287480 288535 . + 0 ID=cds-WP_011260761.1;Parent=gene-IXO1104_RS01305;Dbxref=Genbank:WP_011260761.1;Name=WP_011260761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850649.1;locus_tag=IXO1104_RS01305;product=ATP-binding protein;protein_id=WP_011260761.1;transl_table=11 NZ_CP047492.1 RefSeq gene 288528 289955 . + . ID=gene-IXO1104_RS01310;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=IXO1104_RS01310;old_locus_tag=IXO1104_01295 NZ_CP047492.1 Protein Homology CDS 288528 289955 . + 0 ID=cds-WP_011409760.1;Parent=gene-IXO1104_RS01310;Dbxref=Genbank:WP_011409760.1;Name=WP_011409760.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921161.1;locus_tag=IXO1104_RS01310;product=nitrogen regulation protein NR(I);protein_id=WP_011409760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 290454 291056 . + . ID=gene-IXO1104_RS01315;Name=IXO1104_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01315;old_locus_tag=IXO1104_01300 NZ_CP047492.1 Protein Homology CDS 290454 291056 . + 0 ID=cds-WP_027704181.1;Parent=gene-IXO1104_RS01315;Dbxref=Genbank:WP_027704181.1;Name=WP_027704181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165149.1;locus_tag=IXO1104_RS01315;product=superoxide dismutase family protein;protein_id=WP_027704181.1;transl_table=11 NZ_CP047492.1 RefSeq gene 291019 291759 . + . ID=gene-IXO1104_RS01320;Name=IXO1104_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01320;old_locus_tag=IXO1104_01305 NZ_CP047492.1 Protein Homology CDS 291019 291759 . + 0 ID=cds-WP_230455461.1;Parent=gene-IXO1104_RS01320;Dbxref=Genbank:WP_230455461.1;Name=WP_230455461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260758.1;locus_tag=IXO1104_RS01320;product=superoxide dismutase family protein;protein_id=WP_230455461.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 291754 292035 . - . ID=gene-IXO1104_RS01325;Name=IXO1104_RS01325;end_range=292035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01325;old_locus_tag=IXO1104_01310;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 291754 292035 . - 0 ID=cds-IXO1104_RS01325;Parent=gene-IXO1104_RS01325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=292035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=IXO1104_RS01325;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 292042 293007 . - . ID=gene-IXO1104_RS01330;Name=IXO1104_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01330;old_locus_tag=IXO1104_01315 NZ_CP047492.1 Protein Homology CDS 292042 293007 . - 0 ID=cds-WP_109182027.1-2;Parent=gene-IXO1104_RS01330;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS01330;product=IS1595 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 293095 293631 . - . ID=gene-IXO1104_RS01335;Name=IXO1104_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01335;old_locus_tag=IXO1104_01320 NZ_CP047492.1 Protein Homology CDS 293095 293631 . - 0 ID=cds-WP_011260755.1;Parent=gene-IXO1104_RS01335;Dbxref=Genbank:WP_011260755.1;Name=WP_011260755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156018.1;locus_tag=IXO1104_RS01335;product=tail fiber protein;protein_id=WP_011260755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 293690 294217 . - . ID=gene-IXO1104_RS01340;Name=IXO1104_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01340;old_locus_tag=IXO1104_01325 NZ_CP047492.1 Protein Homology CDS 293690 294217 . - 0 ID=cds-WP_011260754.1;Parent=gene-IXO1104_RS01340;Dbxref=Genbank:WP_011260754.1;Name=WP_011260754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341084.1;locus_tag=IXO1104_RS01340;product=tail fiber protein;protein_id=WP_011260754.1;transl_table=11 NZ_CP047492.1 RefSeq gene 294286 294831 . - . ID=gene-IXO1104_RS01345;Name=IXO1104_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01345;old_locus_tag=IXO1104_01330 NZ_CP047492.1 Protein Homology CDS 294286 294831 . - 0 ID=cds-WP_011409756.1;Parent=gene-IXO1104_RS01345;Dbxref=Genbank:WP_011409756.1;Name=WP_011409756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364925.1;locus_tag=IXO1104_RS01345;product=tail fiber protein;protein_id=WP_011409756.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 295123 299190 . + . ID=gene-IXO1104_RS01350;Name=IXO1104_RS01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01350;old_locus_tag=IXO1104_01335;pseudo=true NZ_CP047492.1 Protein Homology CDS 295123 299190 . + 0 ID=cds-IXO1104_RS01350;Parent=gene-IXO1104_RS01350;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156020.1;locus_tag=IXO1104_RS01350;product=putative Ig domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 299607 301196 . - . ID=gene-IXO1104_RS01355;Name=IXO1104_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01355;old_locus_tag=IXO1104_01340 NZ_CP047492.1 GeneMarkS-2+ CDS 299607 301196 . - 0 ID=cds-WP_230455462.1;Parent=gene-IXO1104_RS01355;Dbxref=Genbank:WP_230455462.1;Name=WP_230455462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01355;product=hypothetical protein;protein_id=WP_230455462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 301186 302421 . + . ID=gene-IXO1104_RS01360;Name=IXO1104_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01360;old_locus_tag=IXO1104_01345 NZ_CP047492.1 Protein Homology CDS 301186 302421 . + 0 ID=cds-WP_044756255.1;Parent=gene-IXO1104_RS01360;Dbxref=Genbank:WP_044756255.1;Name=WP_044756255.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS01360;product=ISL3 family transposase;protein_id=WP_044756255.1;transl_table=11 NZ_CP047492.1 RefSeq gene 302418 302678 . + . ID=gene-IXO1104_RS01365;Name=IXO1104_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01365 NZ_CP047492.1 GeneMarkS-2+ CDS 302418 302678 . + 0 ID=cds-WP_044756256.1;Parent=gene-IXO1104_RS01365;Dbxref=Genbank:WP_044756256.1;Name=WP_044756256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01365;product=hypothetical protein;protein_id=WP_044756256.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 302589 302774 . - . ID=gene-IXO1104_RS01370;Name=IXO1104_RS01370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01370;partial=true;pseudo=true;start_range=.,302589 NZ_CP047492.1 Protein Homology CDS 302589 302774 . - 0 ID=cds-IXO1104_RS01370;Parent=gene-IXO1104_RS01370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=IXO1104_RS01370;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,302589;transl_table=11 NZ_CP047492.1 RefSeq gene 302875 304089 . + . ID=gene-IXO1104_RS01375;Name=IXO1104_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01375;old_locus_tag=IXO1104_01355 NZ_CP047492.1 Protein Homology CDS 302875 304089 . + 0 ID=cds-WP_011407913.1-2;Parent=gene-IXO1104_RS01375;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS01375;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 304030 304941 . - . ID=gene-IXO1104_RS01380;Name=IXO1104_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01380;old_locus_tag=IXO1104_01360 NZ_CP047492.1 GeneMarkS-2+ CDS 304030 304941 . - 0 ID=cds-WP_241846826.1;Parent=gene-IXO1104_RS01380;Dbxref=Genbank:WP_241846826.1;Name=WP_241846826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01380;product=hypothetical protein;protein_id=WP_241846826.1;transl_table=11 NZ_CP047492.1 RefSeq gene 305009 305311 . - . ID=gene-IXO1104_RS01385;Name=IXO1104_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01385;old_locus_tag=IXO1104_01365 NZ_CP047492.1 GeneMarkS-2+ CDS 305009 305311 . - 0 ID=cds-WP_133260594.1;Parent=gene-IXO1104_RS01385;Dbxref=Genbank:WP_133260594.1;Name=WP_133260594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01385;product=hypothetical protein;protein_id=WP_133260594.1;transl_table=11 NZ_CP047492.1 RefSeq gene 305347 308760 . + . ID=gene-IXO1104_RS01390;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=IXO1104_RS01390;old_locus_tag=IXO1104_01370 NZ_CP047492.1 Protein Homology CDS 305347 308760 . + 0 ID=cds-WP_075240674.1;Parent=gene-IXO1104_RS01390;Dbxref=Genbank:WP_075240674.1;Name=WP_075240674.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164976.1;locus_tag=IXO1104_RS01390;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_075240674.1;transl_table=11 NZ_CP047492.1 RefSeq gene 308757 312830 . + . ID=gene-IXO1104_RS01395;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=IXO1104_RS01395;old_locus_tag=IXO1104_01375 NZ_CP047492.1 Protein Homology CDS 308757 312830 . + 0 ID=cds-WP_041182334.1;Parent=gene-IXO1104_RS01395;Dbxref=Genbank:WP_041182334.1;Name=WP_041182334.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171629.1;locus_tag=IXO1104_RS01395;product=exodeoxyribonuclease V subunit beta;protein_id=WP_041182334.1;transl_table=11 NZ_CP047492.1 RefSeq gene 313018 315270 . + . ID=gene-IXO1104_RS01400;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=IXO1104_RS01400;old_locus_tag=IXO1104_01380 NZ_CP047492.1 Protein Homology CDS 313018 315270 . + 0 ID=cds-WP_012443753.1;Parent=gene-IXO1104_RS01400;Dbxref=Genbank:WP_012443753.1;Name=WP_012443753.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159993.1;locus_tag=IXO1104_RS01400;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_012443753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 315365 315646 . + . ID=gene-IXO1104_RS01405;Name=IXO1104_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01405;old_locus_tag=IXO1104_01385 NZ_CP047492.1 Protein Homology CDS 315365 315646 . + 0 ID=cds-WP_012443754.1;Parent=gene-IXO1104_RS01405;Dbxref=Genbank:WP_012443754.1;Name=WP_012443754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=IXO1104_RS01405;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012443754.1;transl_table=11 NZ_CP047492.1 RefSeq gene 315664 315954 . + . ID=gene-IXO1104_RS01410;Name=IXO1104_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01410;old_locus_tag=IXO1104_01390 NZ_CP047492.1 Protein Homology CDS 315664 315954 . + 0 ID=cds-WP_011260746.1;Parent=gene-IXO1104_RS01410;Dbxref=Genbank:WP_011260746.1;Name=WP_011260746.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156025.1;locus_tag=IXO1104_RS01410;product=HigA family addiction module antitoxin;protein_id=WP_011260746.1;transl_table=11 NZ_CP047492.1 RefSeq gene 316883 318277 . + . ID=gene-IXO1104_RS01415;Name=IXO1104_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01415;old_locus_tag=IXO1104_01395 NZ_CP047492.1 Protein Homology CDS 316883 318277 . + 0 ID=cds-WP_027703652.1;Parent=gene-IXO1104_RS01415;Dbxref=Genbank:WP_027703652.1;Name=WP_027703652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159992.1;locus_tag=IXO1104_RS01415;product=nucleoside hydrolase;protein_id=WP_027703652.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 318380 318567 . - . ID=gene-IXO1104_RS01420;Name=IXO1104_RS01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01420;pseudo=true NZ_CP047492.1 Protein Homology CDS 318380 318567 . - 0 ID=cds-IXO1104_RS01420;Parent=gene-IXO1104_RS01420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482327.1;locus_tag=IXO1104_RS01420;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 318727 319059 . - . ID=gene-IXO1104_RS01425;Name=IXO1104_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01425;old_locus_tag=IXO1104_01405 NZ_CP047492.1 Protein Homology CDS 318727 319059 . - 0 ID=cds-WP_011260743.1;Parent=gene-IXO1104_RS01425;Dbxref=Genbank:WP_011260743.1;Name=WP_011260743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302538.1;locus_tag=IXO1104_RS01425;product=hypothetical protein;protein_id=WP_011260743.1;transl_table=11 NZ_CP047492.1 RefSeq gene 319314 319640 . + . ID=gene-IXO1104_RS01430;Name=IXO1104_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01430;old_locus_tag=IXO1104_01410 NZ_CP047492.1 Protein Homology CDS 319314 319640 . + 0 ID=cds-WP_241846827.1;Parent=gene-IXO1104_RS01430;Dbxref=Genbank:WP_241846827.1;Name=WP_241846827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112541.1;locus_tag=IXO1104_RS01430;product=hypothetical protein;protein_id=WP_241846827.1;transl_table=11 NZ_CP047492.1 RefSeq gene 319768 320190 . + . ID=gene-IXO1104_RS01435;Name=IXO1104_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01435;old_locus_tag=IXO1104_01415 NZ_CP047492.1 Protein Homology CDS 319768 320190 . + 0 ID=cds-WP_033013301.1;Parent=gene-IXO1104_RS01435;Dbxref=Genbank:WP_033013301.1;Name=WP_033013301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304496.1;locus_tag=IXO1104_RS01435;product=PAAR domain-containing protein;protein_id=WP_033013301.1;transl_table=11 NZ_CP047492.1 RefSeq gene 320193 320669 . + . ID=gene-IXO1104_RS01440;Name=IXO1104_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01440;old_locus_tag=IXO1104_01420 NZ_CP047492.1 Protein Homology CDS 320193 320669 . + 0 ID=cds-WP_011260741.1;Parent=gene-IXO1104_RS01440;Dbxref=Genbank:WP_011260741.1;Name=WP_011260741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302534.1;locus_tag=IXO1104_RS01440;product=DUF4123 domain-containing protein;protein_id=WP_011260741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 320662 320994 . + . ID=gene-IXO1104_RS01445;Name=IXO1104_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01445;old_locus_tag=IXO1104_01425 NZ_CP047492.1 Protein Homology CDS 320662 320994 . + 0 ID=cds-WP_011260740.1;Parent=gene-IXO1104_RS01445;Dbxref=Genbank:WP_011260740.1;Name=WP_011260740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260740.1;locus_tag=IXO1104_RS01445;product=hypothetical protein;protein_id=WP_011260740.1;transl_table=11 NZ_CP047492.1 RefSeq gene 321003 321788 . + . ID=gene-IXO1104_RS01450;Name=IXO1104_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01450;old_locus_tag=IXO1104_01430 NZ_CP047492.1 Protein Homology CDS 321003 321788 . + 0 ID=cds-WP_027703650.1;Parent=gene-IXO1104_RS01450;Dbxref=Genbank:WP_027703650.1;Name=WP_027703650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409744.1;locus_tag=IXO1104_RS01450;product=Tox-REase-5 domain-containing protein;protein_id=WP_027703650.1;transl_table=11 NZ_CP047492.1 RefSeq gene 321785 322543 . + . ID=gene-IXO1104_RS01455;Name=IXO1104_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01455;old_locus_tag=IXO1104_01435 NZ_CP047492.1 Protein Homology CDS 321785 322543 . + 0 ID=cds-WP_033013299.1;Parent=gene-IXO1104_RS01455;Dbxref=Genbank:WP_033013299.1;Name=WP_033013299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305439.1;locus_tag=IXO1104_RS01455;product=Imm52 family immunity protein;protein_id=WP_033013299.1;transl_table=11 NZ_CP047492.1 RefSeq gene 322752 323000 . - . ID=gene-IXO1104_RS01460;Name=IXO1104_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01460;old_locus_tag=IXO1104_01440 NZ_CP047492.1 Protein Homology CDS 322752 323000 . - 0 ID=cds-WP_011260739.1;Parent=gene-IXO1104_RS01460;Dbxref=Genbank:WP_011260739.1;Name=WP_011260739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260739.1;locus_tag=IXO1104_RS01460;product=helix-turn-helix transcriptional regulator;protein_id=WP_011260739.1;transl_table=11 NZ_CP047492.1 RefSeq gene 323162 323428 . + . ID=gene-IXO1104_RS01465;Name=IXO1104_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01465;old_locus_tag=IXO1104_01445 NZ_CP047492.1 Protein Homology CDS 323162 323428 . + 0 ID=cds-WP_042465346.1;Parent=gene-IXO1104_RS01465;Dbxref=Genbank:WP_042465346.1;Name=WP_042465346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381297.1;locus_tag=IXO1104_RS01465;product=hypothetical protein;protein_id=WP_042465346.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 323525 323602 . - . ID=gene-IXO1104_RS01470;Name=IXO1104_RS01470;end_range=323602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01470;old_locus_tag=IXO1104_01450;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 323525 323602 . - 0 ID=cds-IXO1104_RS01470;Parent=gene-IXO1104_RS01470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=323602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159991.1;locus_tag=IXO1104_RS01470;partial=true;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 323898 325093 . - . ID=gene-IXO1104_RS01475;Name=IXO1104_RS01475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01475;old_locus_tag=IXO1104_01455;pseudo=true NZ_CP047492.1 Protein Homology CDS 323898 325093 . - 0 ID=cds-IXO1104_RS01475;Parent=gene-IXO1104_RS01475;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1104_RS01475;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 325245 326108 . + . ID=gene-IXO1104_RS01480;Name=IXO1104_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01480;old_locus_tag=IXO1104_01460 NZ_CP047492.1 Protein Homology CDS 325245 326108 . + 0 ID=cds-WP_011260735.1;Parent=gene-IXO1104_RS01480;Dbxref=Genbank:WP_011260735.1;Name=WP_011260735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156935.1;locus_tag=IXO1104_RS01480;product=DUF2884 family protein;protein_id=WP_011260735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 326357 326785 . - . ID=gene-IXO1104_RS01485;Name=IXO1104_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01485;old_locus_tag=IXO1104_01465 NZ_CP047492.1 Protein Homology CDS 326357 326785 . - 0 ID=cds-WP_011409738.1;Parent=gene-IXO1104_RS01485;Dbxref=Genbank:WP_011409738.1;Name=WP_011409738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007509237.1;locus_tag=IXO1104_RS01485;product=organic hydroperoxide resistance protein;protein_id=WP_011409738.1;transl_table=11 NZ_CP047492.1 RefSeq gene 326887 327345 . - . ID=gene-IXO1104_RS01490;Name=IXO1104_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01490;old_locus_tag=IXO1104_01470 NZ_CP047492.1 Protein Homology CDS 326887 327345 . - 0 ID=cds-WP_011260733.1;Parent=gene-IXO1104_RS01490;Dbxref=Genbank:WP_011260733.1;Name=WP_011260733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968315.1;locus_tag=IXO1104_RS01490;product=MarR family transcriptional regulator;protein_id=WP_011260733.1;transl_table=11 NZ_CP047492.1 RefSeq gene 327692 327768 . + . ID=gene-IXO1104_RS01495;Name=IXO1104_RS01495;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS01495;old_locus_tag=IXO1104_01475 NZ_CP047492.1 cmsearch ncRNA 327692 327768 . + . ID=rna-IXO1104_RS01495;Parent=gene-IXO1104_RS01495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01495;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 327692 327768 . + . ID=exon-IXO1104_RS01495-1;Parent=rna-IXO1104_RS01495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01495;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 327862 328803 . + . ID=gene-IXO1104_RS01500;Name=IXO1104_RS01500;end_range=328803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01500;old_locus_tag=IXO1104_01480;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 327862 328803 . + 0 ID=cds-IXO1104_RS01500;Parent=gene-IXO1104_RS01500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=328803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052641.1;locus_tag=IXO1104_RS01500;partial=true;product=DUF3182 family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 328812 329768 . - . ID=gene-IXO1104_RS01505;Name=IXO1104_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01505;old_locus_tag=IXO1104_01485 NZ_CP047492.1 Protein Homology CDS 328812 329768 . - 0 ID=cds-WP_164994094.1;Parent=gene-IXO1104_RS01505;Dbxref=Genbank:WP_164994094.1;Name=WP_164994094.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS01505;product=IS30 family transposase;protein_id=WP_164994094.1;transl_table=11 NZ_CP047492.1 RefSeq gene 329871 331190 . - . ID=gene-IXO1104_RS01510;Name=IXO1104_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01510;old_locus_tag=IXO1104_01490 NZ_CP047492.1 Protein Homology CDS 329871 331190 . - 0 ID=cds-WP_109182069.1;Parent=gene-IXO1104_RS01510;Dbxref=Genbank:WP_109182069.1;Name=WP_109182069.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS01510;product=IS701 family transposase;protein_id=WP_109182069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 331319 332117 . + . ID=gene-IXO1104_RS01515;Name=IXO1104_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01515;old_locus_tag=IXO1104_01495 NZ_CP047492.1 Protein Homology CDS 331319 331590 . + 0 ID=cds-WP_109182041.1;Parent=gene-IXO1104_RS01515;Dbxref=Genbank:WP_109182041.1;Name=WP_109182041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01515;product=IS5 family transposase;protein_id=WP_109182041.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 331589 332117 . + 1 ID=cds-WP_109182041.1;Parent=gene-IXO1104_RS01515;Dbxref=Genbank:WP_109182041.1;Name=WP_109182041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01515;product=IS5 family transposase;protein_id=WP_109182041.1;transl_table=11 NZ_CP047492.1 RefSeq gene 332150 332830 . - . ID=gene-IXO1104_RS01520;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=IXO1104_RS01520;old_locus_tag=IXO1104_01500 NZ_CP047492.1 Protein Homology CDS 332150 332830 . - 0 ID=cds-WP_011260727.1;Parent=gene-IXO1104_RS01520;Dbxref=Genbank:WP_011260727.1;Name=WP_011260727.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260727.1;locus_tag=IXO1104_RS01520;product=HTH-type transcriptional repressor FabR;protein_id=WP_011260727.1;transl_table=11 NZ_CP047492.1 RefSeq gene 332923 333999 . + . ID=gene-IXO1104_RS01525;Name=IXO1104_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01525;old_locus_tag=IXO1104_01505 NZ_CP047492.1 Protein Homology CDS 332923 333999 . + 0 ID=cds-WP_011409734.1;Parent=gene-IXO1104_RS01525;Dbxref=Genbank:WP_011409734.1;Name=WP_011409734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974569.1;locus_tag=IXO1104_RS01525;product=ferredoxin reductase;protein_id=WP_011409734.1;transl_table=11 NZ_CP047492.1 RefSeq gene 334009 335130 . + . ID=gene-IXO1104_RS01530;Name=IXO1104_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01530;old_locus_tag=IXO1104_01510 NZ_CP047492.1 Protein Homology CDS 334009 335130 . + 0 ID=cds-WP_011260725.1;Parent=gene-IXO1104_RS01530;Dbxref=Genbank:WP_011260725.1;Name=WP_011260725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348875.1;locus_tag=IXO1104_RS01530;product=acyl-CoA desaturase;protein_id=WP_011260725.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 335196 336302 . - . ID=gene-IXO1104_RS01535;Name=IXO1104_RS01535;end_range=336302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01535;old_locus_tag=IXO1104_01515;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 335196 336302 . - 0 ID=cds-IXO1104_RS01535;Parent=gene-IXO1104_RS01535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=336302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302203.1;locus_tag=IXO1104_RS01535;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 336314 337077 . - . ID=gene-IXO1104_RS01540;Name=IXO1104_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01540;old_locus_tag=IXO1104_01520 NZ_CP047492.1 Protein Homology CDS 336762 337077 . - 0 ID=cds-WP_094187715.1-2;Parent=gene-IXO1104_RS01540;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS01540;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 336314 336762 . - 2 ID=cds-WP_094187715.1-2;Parent=gene-IXO1104_RS01540;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS01540;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 337123 337575 . - . ID=gene-IXO1104_RS01545;Name=IXO1104_RS01545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01545;old_locus_tag=IXO1104_01525;partial=true;pseudo=true;start_range=.,337123 NZ_CP047492.1 Protein Homology CDS 337123 337575 . - 0 ID=cds-IXO1104_RS01545;Parent=gene-IXO1104_RS01545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167492.1;locus_tag=IXO1104_RS01545;partial=true;product=CSS-motif domain-containing protein;pseudo=true;start_range=.,337123;transl_table=11 NZ_CP047492.1 RefSeq gene 337958 338134 . + . ID=gene-IXO1104_RS01550;Name=IXO1104_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01550;old_locus_tag=IXO1104_01530 NZ_CP047492.1 Protein Homology CDS 337958 338134 . + 0 ID=cds-WP_010374782.1;Parent=gene-IXO1104_RS01550;Dbxref=Genbank:WP_010374782.1;Name=WP_010374782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374782.1;locus_tag=IXO1104_RS01550;product=hypothetical protein;protein_id=WP_010374782.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 338289 338785 . - . ID=gene-IXO1104_RS01555;Name=IXO1104_RS01555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01555;old_locus_tag=IXO1104_01535;pseudo=true NZ_CP047492.1 Protein Homology CDS 338289 338785 . - 0 ID=cds-IXO1104_RS01555;Parent=gene-IXO1104_RS01555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486500.1;locus_tag=IXO1104_RS01555;product=lipocalin family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 339010 339808 . - . ID=gene-IXO1104_RS01560;Name=IXO1104_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01560;old_locus_tag=IXO1104_01540 NZ_CP047492.1 Protein Homology CDS 339537 339808 . - 0 ID=cds-WP_094187716.1;Parent=gene-IXO1104_RS01560;Dbxref=Genbank:WP_094187716.1;Name=WP_094187716.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01560;product=IS5 family transposase;protein_id=WP_094187716.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 339010 339538 . - 1 ID=cds-WP_094187716.1;Parent=gene-IXO1104_RS01560;Dbxref=Genbank:WP_094187716.1;Name=WP_094187716.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01560;product=IS5 family transposase;protein_id=WP_094187716.1;transl_table=11 NZ_CP047492.1 RefSeq gene 339848 339924 . - . ID=gene-IXO1104_RS01565;Name=IXO1104_RS01565;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS01565;old_locus_tag=IXO1104_01545 NZ_CP047492.1 cmsearch ncRNA 339848 339924 . - . ID=rna-IXO1104_RS01565;Parent=gene-IXO1104_RS01565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01565;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 339848 339924 . - . ID=exon-IXO1104_RS01565-1;Parent=rna-IXO1104_RS01565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01565;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 340225 341259 . - . ID=gene-IXO1104_RS01570;Name=IXO1104_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01570;old_locus_tag=IXO1104_01550 NZ_CP047492.1 Protein Homology CDS 340225 341259 . - 0 ID=cds-WP_011260718.1;Parent=gene-IXO1104_RS01570;Dbxref=Genbank:WP_011260718.1;Name=WP_011260718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573829.1;locus_tag=IXO1104_RS01570;product=glycoside hydrolase family 43 protein;protein_id=WP_011260718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 341291 342778 . - . ID=gene-IXO1104_RS01575;Name=IXO1104_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01575;old_locus_tag=IXO1104_01555 NZ_CP047492.1 Protein Homology CDS 341291 342778 . - 0 ID=cds-WP_011409728.1;Parent=gene-IXO1104_RS01575;Dbxref=Genbank:WP_011409728.1;Name=WP_011409728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155198.1;locus_tag=IXO1104_RS01575;product=MFS transporter;protein_id=WP_011409728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 342877 345810 . - . ID=gene-IXO1104_RS01580;Name=IXO1104_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01580;old_locus_tag=IXO1104_01560 NZ_CP047492.1 Protein Homology CDS 342877 345810 . - 0 ID=cds-WP_011409727.1;Parent=gene-IXO1104_RS01580;Dbxref=Genbank:WP_011409727.1;Name=WP_011409727.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155199.1;locus_tag=IXO1104_RS01580;product=TonB-dependent receptor;protein_id=WP_011409727.1;transl_table=11 NZ_CP047492.1 RefSeq gene 346272 347573 . + . ID=gene-IXO1104_RS01585;Name=IXO1104_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01585;old_locus_tag=IXO1104_01565 NZ_CP047492.1 Protein Homology CDS 346272 347573 . + 0 ID=cds-WP_012443772.1;Parent=gene-IXO1104_RS01585;Dbxref=Genbank:WP_012443772.1;Name=WP_012443772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349110.1;locus_tag=IXO1104_RS01585;product=MFS transporter;protein_id=WP_012443772.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 347583 348573 . + . ID=gene-IXO1104_RS01590;Name=IXO1104_RS01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01590;old_locus_tag=IXO1104_01570;pseudo=true NZ_CP047492.1 Protein Homology CDS 347583 348573 . + 0 ID=cds-IXO1104_RS01590;Parent=gene-IXO1104_RS01590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485050.1;locus_tag=IXO1104_RS01590;product=endo-1%2C4-beta-xylanase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 348969 349196 . - . ID=gene-IXO1104_RS01595;Name=IXO1104_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01595 NZ_CP047492.1 Protein Homology CDS 348969 349196 . - 0 ID=cds-WP_228329752.1;Parent=gene-IXO1104_RS01595;Dbxref=Genbank:WP_228329752.1;Name=WP_228329752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155203.1;locus_tag=IXO1104_RS01595;product=hypothetical protein;protein_id=WP_228329752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 349086 349967 . + . ID=gene-IXO1104_RS01600;Name=IXO1104_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01600;old_locus_tag=IXO1104_01575 NZ_CP047492.1 Protein Homology CDS 349086 349967 . + 0 ID=cds-WP_228329751.1;Parent=gene-IXO1104_RS01600;Dbxref=Genbank:WP_228329751.1;Name=WP_228329751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012551.2;locus_tag=IXO1104_RS01600;product=endo-1%2C4-beta-xylanase;protein_id=WP_228329751.1;transl_table=11 NZ_CP047492.1 RefSeq gene 350008 351426 . + . ID=gene-IXO1104_RS01605;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=IXO1104_RS01605;old_locus_tag=IXO1104_01580 NZ_CP047492.1 Protein Homology CDS 350008 351426 . + 0 ID=cds-WP_075240000.1;Parent=gene-IXO1104_RS01605;Dbxref=Genbank:WP_075240000.1;Name=WP_075240000.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916173.1;locus_tag=IXO1104_RS01605;product=glucuronate isomerase;protein_id=WP_075240000.1;transl_table=11 NZ_CP047492.1 RefSeq gene 351653 352708 . + . ID=gene-IXO1104_RS01610;Name=IXO1104_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01610;old_locus_tag=IXO1104_01585 NZ_CP047492.1 Protein Homology CDS 351653 352708 . + 0 ID=cds-WP_012443777.1;Parent=gene-IXO1104_RS01610;Dbxref=Genbank:WP_012443777.1;Name=WP_012443777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154877.1;locus_tag=IXO1104_RS01610;product=hypothetical protein;protein_id=WP_012443777.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 352858 353256 . - . ID=gene-IXO1104_RS01615;Name=IXO1104_RS01615;end_range=353256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01615;old_locus_tag=IXO1104_01590;partial=true;pseudo=true;start_range=.,352858 NZ_CP047492.1 Protein Homology CDS 352858 353256 . - 0 ID=cds-IXO1104_RS01615;Parent=gene-IXO1104_RS01615;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=353256,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612348.1;locus_tag=IXO1104_RS01615;partial=true;product=transposase;pseudo=true;start_range=.,352858;transl_table=11 NZ_CP047492.1 RefSeq gene 353221 353460 . + . ID=gene-IXO1104_RS01620;Name=IXO1104_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01620;old_locus_tag=IXO1104_01595 NZ_CP047492.1 GeneMarkS-2+ CDS 353221 353460 . + 0 ID=cds-WP_230455236.1;Parent=gene-IXO1104_RS01620;Dbxref=Genbank:WP_230455236.1;Name=WP_230455236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01620;product=VOC family protein;protein_id=WP_230455236.1;transl_table=11 NZ_CP047492.1 RefSeq gene 353686 355158 . - . ID=gene-IXO1104_RS01625;Name=IXO1104_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01625;old_locus_tag=IXO1104_01600 NZ_CP047492.1 Protein Homology CDS 353686 355158 . - 0 ID=cds-WP_011260709.1;Parent=gene-IXO1104_RS01625;Dbxref=Genbank:WP_011260709.1;Name=WP_011260709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922858.1;locus_tag=IXO1104_RS01625;product=mannitol dehydrogenase family protein;protein_id=WP_011260709.1;transl_table=11 NZ_CP047492.1 RefSeq gene 355381 358095 . - . ID=gene-IXO1104_RS01630;Name=IXO1104_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01630;old_locus_tag=IXO1104_01605 NZ_CP047492.1 Protein Homology CDS 355381 358095 . - 0 ID=cds-WP_012443780.1;Parent=gene-IXO1104_RS01630;Dbxref=Genbank:WP_012443780.1;Name=WP_012443780.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443780.1;locus_tag=IXO1104_RS01630;product=glycoside hydrolase family 3 protein;protein_id=WP_012443780.1;transl_table=11 NZ_CP047492.1 RefSeq gene 358098 359798 . - . ID=gene-IXO1104_RS01635;Name=IXO1104_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01635;old_locus_tag=IXO1104_01610 NZ_CP047492.1 Protein Homology CDS 358098 359798 . - 0 ID=cds-WP_011260707.1;Parent=gene-IXO1104_RS01635;Dbxref=Genbank:WP_011260707.1;Name=WP_011260707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260707.1;locus_tag=IXO1104_RS01635;product=glycoside hydrolase family 43 protein;protein_id=WP_011260707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 359798 361057 . - . ID=gene-IXO1104_RS01640;Name=IXO1104_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01640;old_locus_tag=IXO1104_01615 NZ_CP047492.1 Protein Homology CDS 359798 361057 . - 0 ID=cds-WP_011409724.1;Parent=gene-IXO1104_RS01640;Dbxref=Genbank:WP_011409724.1;Name=WP_011409724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349089.1;locus_tag=IXO1104_RS01640;product=D-galactonate dehydratase family protein;protein_id=WP_011409724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 361069 363033 . - . ID=gene-IXO1104_RS01645;Name=IXO1104_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01645;old_locus_tag=IXO1104_01620 NZ_CP047492.1 Protein Homology CDS 361069 363033 . - 0 ID=cds-WP_011409723.1;Parent=gene-IXO1104_RS01645;Dbxref=Genbank:WP_011409723.1;Name=WP_011409723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155225.1;locus_tag=IXO1104_RS01645;product=9-O-acetylesterase;protein_id=WP_011409723.1;transl_table=11 NZ_CP047492.1 RefSeq gene 363030 365225 . - . ID=gene-IXO1104_RS01650;Name=IXO1104_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01650;old_locus_tag=IXO1104_01625 NZ_CP047492.1 Protein Homology CDS 363030 365225 . - 0 ID=cds-WP_075240653.1;Parent=gene-IXO1104_RS01650;Dbxref=Genbank:WP_075240653.1;Name=WP_075240653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409722.1;locus_tag=IXO1104_RS01650;product=alpha-glucuronidase;protein_id=WP_075240653.1;transl_table=11 NZ_CP047492.1 RefSeq gene 365343 365507 . - . ID=gene-IXO1104_RS01655;Name=IXO1104_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01655 NZ_CP047492.1 Protein Homology CDS 365343 365507 . - 0 ID=cds-WP_012443786.1;Parent=gene-IXO1104_RS01655;Dbxref=Genbank:WP_012443786.1;Name=WP_012443786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443786.1;locus_tag=IXO1104_RS01655;product=hypothetical protein;protein_id=WP_012443786.1;transl_table=11 NZ_CP047492.1 RefSeq gene 365458 366468 . + . ID=gene-IXO1104_RS01660;Name=IXO1104_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01660;old_locus_tag=IXO1104_01630 NZ_CP047492.1 Protein Homology CDS 365458 366468 . + 0 ID=cds-WP_012443787.1;Parent=gene-IXO1104_RS01660;Dbxref=Genbank:WP_012443787.1;Name=WP_012443787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974622.1;locus_tag=IXO1104_RS01660;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_012443787.1;transl_table=11 NZ_CP047492.1 RefSeq gene 366694 368031 . - . ID=gene-IXO1104_RS01665;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=IXO1104_RS01665;old_locus_tag=IXO1104_01635 NZ_CP047492.1 Protein Homology CDS 366694 368031 . - 0 ID=cds-WP_011259480.1;Parent=gene-IXO1104_RS01665;Dbxref=Genbank:WP_011259480.1;Name=WP_011259480.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=IXO1104_RS01665;product=xylose isomerase;protein_id=WP_011259480.1;transl_table=11 NZ_CP047492.1 RefSeq gene 368635 369552 . + . ID=gene-IXO1104_RS01670;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=IXO1104_RS01670;old_locus_tag=IXO1104_01640 NZ_CP047492.1 Protein Homology CDS 368635 369552 . + 0 ID=cds-WP_012443789.1;Parent=gene-IXO1104_RS01670;Dbxref=Genbank:WP_012443789.1;Name=WP_012443789.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374500.1;locus_tag=IXO1104_RS01670;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_012443789.1;transl_table=11 NZ_CP047492.1 RefSeq gene 369616 370521 . + . ID=gene-IXO1104_RS01675;Name=IXO1104_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01675;old_locus_tag=IXO1104_01645 NZ_CP047492.1 Protein Homology CDS 369616 370521 . + 0 ID=cds-WP_011260701.1;Parent=gene-IXO1104_RS01675;Dbxref=Genbank:WP_011260701.1;Name=WP_011260701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1;locus_tag=IXO1104_RS01675;product=recombination-associated protein RdgC;protein_id=WP_011260701.1;transl_table=11 NZ_CP047492.1 RefSeq gene 371148 371933 . + . ID=gene-IXO1104_RS01680;Name=IXO1104_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01680;old_locus_tag=IXO1104_01650 NZ_CP047492.1 Protein Homology CDS 371148 371933 . + 0 ID=cds-WP_011409719.1;Parent=gene-IXO1104_RS01680;Dbxref=Genbank:WP_011409719.1;Name=WP_011409719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374496.1;locus_tag=IXO1104_RS01680;product=M48 family metallopeptidase;protein_id=WP_011409719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 371996 372071 . + . ID=gene-IXO1104_RS01685;Name=IXO1104_RS01685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS01685;old_locus_tag=IXO1104_01655 NZ_CP047492.1 cmsearch ncRNA 371996 372071 . + . ID=rna-IXO1104_RS01685;Parent=gene-IXO1104_RS01685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01685;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 371996 372071 . + . ID=exon-IXO1104_RS01685-1;Parent=rna-IXO1104_RS01685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01685;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 372204 372602 . - . ID=gene-IXO1104_RS01690;Name=IXO1104_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01690;old_locus_tag=IXO1104_01660 NZ_CP047492.1 Protein Homology CDS 372204 372602 . - 0 ID=cds-WP_232460303.1;Parent=gene-IXO1104_RS01690;Dbxref=Genbank:WP_232460303.1;Name=WP_232460303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409718.1;locus_tag=IXO1104_RS01690;product=hypothetical protein;protein_id=WP_232460303.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 372743 373593 . - . ID=gene-IXO1104_RS01695;Name=IXO1104_RS01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01695;old_locus_tag=IXO1104_01665;pseudo=true NZ_CP047492.1 Protein Homology CDS 372743 373593 . - 0 ID=cds-IXO1104_RS01695;Parent=gene-IXO1104_RS01695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904259.1;locus_tag=IXO1104_RS01695;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 373596 374561 . - . ID=gene-IXO1104_RS01700;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=IXO1104_RS01700;old_locus_tag=IXO1104_01670 NZ_CP047492.1 Protein Homology CDS 373596 374561 . - 0 ID=cds-WP_011409716.1;Parent=gene-IXO1104_RS01700;Dbxref=Genbank:WP_011409716.1;Name=WP_011409716.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505180.1;locus_tag=IXO1104_RS01700;product=ferrochelatase;protein_id=WP_011409716.1;transl_table=11 NZ_CP047492.1 RefSeq gene 374716 375618 . + . ID=gene-IXO1104_RS01705;Name=IXO1104_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01705;old_locus_tag=IXO1104_01675 NZ_CP047492.1 Protein Homology CDS 374716 375618 . + 0 ID=cds-WP_011409715.1;Parent=gene-IXO1104_RS01705;Dbxref=Genbank:WP_011409715.1;Name=WP_011409715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154679.1;locus_tag=IXO1104_RS01705;product=YSC84-related protein;protein_id=WP_011409715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 375691 375918 . + . ID=gene-IXO1104_RS01710;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=IXO1104_RS01710;old_locus_tag=IXO1104_01680 NZ_CP047492.1 Protein Homology CDS 375691 375918 . + 0 ID=cds-WP_075240507.1;Parent=gene-IXO1104_RS01710;Dbxref=Genbank:WP_075240507.1;Name=WP_075240507.1;Ontology_term=GO:0043953,GO:0016021;gbkey=CDS;gene=tatA;go_component=integral component of membrane|0016021||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449086.1;locus_tag=IXO1104_RS01710;product=Sec-independent protein translocase subunit TatA;protein_id=WP_075240507.1;transl_table=11 NZ_CP047492.1 RefSeq gene 375934 376575 . + . ID=gene-IXO1104_RS01715;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=IXO1104_RS01715;old_locus_tag=IXO1104_01685 NZ_CP047492.1 Protein Homology CDS 375934 376575 . + 0 ID=cds-WP_044756277.1;Parent=gene-IXO1104_RS01715;Dbxref=Genbank:WP_044756277.1;Name=WP_044756277.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349077.1;locus_tag=IXO1104_RS01715;product=Sec-independent protein translocase protein TatB;protein_id=WP_044756277.1;transl_table=11 NZ_CP047492.1 RefSeq gene 376572 377327 . + . ID=gene-IXO1104_RS01720;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=IXO1104_RS01720;old_locus_tag=IXO1104_01690 NZ_CP047492.1 Protein Homology CDS 376572 377327 . + 0 ID=cds-WP_011260694.1;Parent=gene-IXO1104_RS01720;Dbxref=Genbank:WP_011260694.1;Name=WP_011260694.1;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302261.1;locus_tag=IXO1104_RS01720;product=twin-arginine translocase subunit TatC;protein_id=WP_011260694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 377479 378378 . - . ID=gene-IXO1104_RS01725;Name=IXO1104_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01725;old_locus_tag=IXO1104_01695 NZ_CP047492.1 Protein Homology CDS 377479 378378 . - 0 ID=cds-WP_012443793.1;Parent=gene-IXO1104_RS01725;Dbxref=Genbank:WP_012443793.1;Name=WP_012443793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154682.1;locus_tag=IXO1104_RS01725;product=BPSS1780 family membrane protein;protein_id=WP_012443793.1;transl_table=11 NZ_CP047492.1 RefSeq gene 378438 379190 . - . ID=gene-IXO1104_RS01730;Name=IXO1104_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01730;old_locus_tag=IXO1104_01700 NZ_CP047492.1 Protein Homology CDS 378438 379190 . - 0 ID=cds-WP_011409712.1;Parent=gene-IXO1104_RS01730;Dbxref=Genbank:WP_011409712.1;Name=WP_011409712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154683.1;locus_tag=IXO1104_RS01730;product=glutamine amidotransferase;protein_id=WP_011409712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 379734 380532 . - . ID=gene-IXO1104_RS01735;Name=IXO1104_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01735;old_locus_tag=IXO1104_01705 NZ_CP047492.1 Protein Homology CDS 380261 380532 . - 0 ID=cds-WP_094187753.1;Parent=gene-IXO1104_RS01735;Dbxref=Genbank:WP_094187753.1;Name=WP_094187753.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01735;product=IS5 family transposase;protein_id=WP_094187753.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 379734 380262 . - 1 ID=cds-WP_094187753.1;Parent=gene-IXO1104_RS01735;Dbxref=Genbank:WP_094187753.1;Name=WP_094187753.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01735;product=IS5 family transposase;protein_id=WP_094187753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 380673 389456 . + . ID=gene-IXO1104_RS01740;Name=IXO1104_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01740;old_locus_tag=IXO1104_01710 NZ_CP047492.1 Protein Homology CDS 380673 389456 . + 0 ID=cds-WP_113328208.1;Parent=gene-IXO1104_RS01740;Dbxref=Genbank:WP_113328208.1;Name=WP_113328208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409710.1;locus_tag=IXO1104_RS01740;product=hypothetical protein;protein_id=WP_113328208.1;transl_table=11 NZ_CP047492.1 RefSeq gene 389842 391656 . - . ID=gene-IXO1104_RS01745;Name=IXO1104_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01745;old_locus_tag=IXO1104_01715 NZ_CP047492.1 Protein Homology CDS 389842 391656 . - 0 ID=cds-WP_011260689.1;Parent=gene-IXO1104_RS01745;Dbxref=Genbank:WP_011260689.1;Name=WP_011260689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803759.1;locus_tag=IXO1104_RS01745;product=GspE/PulE family protein;protein_id=WP_011260689.1;transl_table=11 NZ_CP047492.1 RefSeq gene 391746 392654 . + . ID=gene-IXO1104_RS01750;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS01750;old_locus_tag=IXO1104_01720 NZ_CP047492.1 Protein Homology CDS 391746 392654 . + 0 ID=cds-WP_012443796.1;Parent=gene-IXO1104_RS01750;Dbxref=Genbank:WP_012443796.1;Name=WP_012443796.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1;locus_tag=IXO1104_RS01750;product=glycine--tRNA ligase subunit alpha;protein_id=WP_012443796.1;transl_table=11 NZ_CP047492.1 RefSeq gene 392943 395180 . + . ID=gene-IXO1104_RS01755;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=IXO1104_RS01755;old_locus_tag=IXO1104_01725 NZ_CP047492.1 Protein Homology CDS 392943 395180 . + 0 ID=cds-WP_011409707.1;Parent=gene-IXO1104_RS01755;Dbxref=Genbank:WP_011409707.1;Name=WP_011409707.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409707.1;locus_tag=IXO1104_RS01755;product=glycine--tRNA ligase subunit beta;protein_id=WP_011409707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 395180 396781 . + . ID=gene-IXO1104_RS01760;Name=IXO1104_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01760;old_locus_tag=IXO1104_01730 NZ_CP047492.1 Protein Homology CDS 395180 396781 . + 0 ID=cds-WP_011260686.1;Parent=gene-IXO1104_RS01760;Dbxref=Genbank:WP_011260686.1;Name=WP_011260686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374446.1;locus_tag=IXO1104_RS01760;product=tetratricopeptide repeat-containing sulfotransferase family protein;protein_id=WP_011260686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 397034 399733 . - . ID=gene-IXO1104_RS01765;Name=IXO1104_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01765;old_locus_tag=IXO1104_01735 NZ_CP047492.1 Protein Homology CDS 397034 399733 . - 0 ID=cds-WP_027703457.1;Parent=gene-IXO1104_RS01765;Dbxref=Genbank:WP_027703457.1;Name=WP_027703457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163068.1;locus_tag=IXO1104_RS01765;product=TonB-dependent receptor;protein_id=WP_027703457.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 399970 400239 . - . ID=gene-IXO1104_RS01770;Name=IXO1104_RS01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01770;old_locus_tag=IXO1104_01740;partial=true;pseudo=true;start_range=.,399970 NZ_CP047492.1 Protein Homology CDS 399970 400239 . - 0 ID=cds-IXO1104_RS01770;Parent=gene-IXO1104_RS01770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS01770;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,399970;transl_table=11 NZ_CP047492.1 RefSeq gene 400264 400398 . - . ID=gene-IXO1104_RS01775;Name=IXO1104_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01775 NZ_CP047492.1 GeneMarkS-2+ CDS 400264 400398 . - 0 ID=cds-WP_012443802.1;Parent=gene-IXO1104_RS01775;Dbxref=Genbank:WP_012443802.1;Name=WP_012443802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01775;product=hypothetical protein;protein_id=WP_012443802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 400553 401137 . - . ID=gene-IXO1104_RS01780;Name=IXO1104_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01780;old_locus_tag=IXO1104_01745 NZ_CP047492.1 Protein Homology CDS 400553 401137 . - 0 ID=cds-WP_075239054.1;Parent=gene-IXO1104_RS01780;Dbxref=Genbank:WP_075239054.1;Name=WP_075239054.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=IXO1104_RS01780;product=ATP-binding cassette domain-containing protein;protein_id=WP_075239054.1;transl_table=11 NZ_CP047492.1 RefSeq gene 401294 402388 . - . ID=gene-IXO1104_RS01785;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=IXO1104_RS01785;old_locus_tag=IXO1104_01750 NZ_CP047492.1 Protein Homology CDS 401294 402388 . - 0 ID=cds-WP_075239055.1;Parent=gene-IXO1104_RS01785;Dbxref=Genbank:WP_075239055.1;Name=WP_075239055.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974994.1;locus_tag=IXO1104_RS01785;product=cell division protein ZapE;protein_id=WP_075239055.1;transl_table=11 NZ_CP047492.1 RefSeq gene 402467 403129 . - . ID=gene-IXO1104_RS01790;Name=IXO1104_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01790;old_locus_tag=IXO1104_01755 NZ_CP047492.1 Protein Homology CDS 402467 403129 . - 0 ID=cds-WP_075239062.1;Parent=gene-IXO1104_RS01790;Dbxref=Genbank:WP_075239062.1;Name=WP_075239062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370426.1;locus_tag=IXO1104_RS01790;product=alpha/beta hydrolase;protein_id=WP_075239062.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 403196 404071 . + . ID=gene-IXO1104_RS01795;Name=IXO1104_RS01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01795;old_locus_tag=IXO1104_01760;pseudo=true NZ_CP047492.1 Protein Homology CDS 403196 404071 . + 0 ID=cds-IXO1104_RS01795;Parent=gene-IXO1104_RS01795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379895.1;locus_tag=IXO1104_RS01795;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 404524 405483 . + . ID=gene-IXO1104_RS01800;Name=IXO1104_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01800;old_locus_tag=IXO1104_01765 NZ_CP047492.1 Protein Homology CDS 404524 405483 . + 0 ID=cds-WP_230455216.1;Parent=gene-IXO1104_RS01800;Dbxref=Genbank:WP_230455216.1;Name=WP_230455216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370429.1;locus_tag=IXO1104_RS01800;product=type III effector protein XopR;protein_id=WP_230455216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 405598 406923 . - . ID=gene-IXO1104_RS01805;Name=IXO1104_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01805;old_locus_tag=IXO1104_01770 NZ_CP047492.1 Protein Homology CDS 405598 406923 . - 0 ID=cds-WP_011260680.1;Parent=gene-IXO1104_RS01805;Dbxref=Genbank:WP_011260680.1;Name=WP_011260680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849151.1;locus_tag=IXO1104_RS01805;product=GTP-binding protein;protein_id=WP_011260680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 406985 407371 . + . ID=gene-IXO1104_RS01810;Name=IXO1104_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01810;old_locus_tag=IXO1104_01775 NZ_CP047492.1 Protein Homology CDS 406985 407371 . + 0 ID=cds-WP_011260679.1;Parent=gene-IXO1104_RS01810;Dbxref=Genbank:WP_011260679.1;Name=WP_011260679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117606.1;locus_tag=IXO1104_RS01810;product=MerC family mercury resistance protein;protein_id=WP_011260679.1;transl_table=11 NZ_CP047492.1 RefSeq gene 407462 409180 . - . ID=gene-IXO1104_RS01815;Name=IXO1104_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01815;old_locus_tag=IXO1104_01780 NZ_CP047492.1 Protein Homology CDS 407462 409180 . - 0 ID=cds-WP_012443806.1;Parent=gene-IXO1104_RS01815;Dbxref=Genbank:WP_012443806.1;Name=WP_012443806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089040.1;locus_tag=IXO1104_RS01815;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_012443806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 409452 409970 . - . ID=gene-IXO1104_RS01820;Name=IXO1104_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01820;old_locus_tag=IXO1104_01785 NZ_CP047492.1 Protein Homology CDS 409452 409970 . - 0 ID=cds-WP_011409699.1;Parent=gene-IXO1104_RS01820;Dbxref=Genbank:WP_011409699.1;Name=WP_011409699.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921137.1;locus_tag=IXO1104_RS01820;product=c-type cytochrome;protein_id=WP_011409699.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 410262 410892 . + . ID=gene-IXO1104_RS01825;Name=IXO1104_RS01825;end_range=410892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01825;old_locus_tag=IXO1104_01790;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 410262 410892 . + 0 ID=cds-IXO1104_RS01825;Parent=gene-IXO1104_RS01825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=410892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450084.1;locus_tag=IXO1104_RS01825;partial=true;product=DUF4198 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 411089 411400 . + . ID=gene-IXO1104_RS01830;Name=IXO1104_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01830;old_locus_tag=IXO1104_01795 NZ_CP047492.1 Protein Homology CDS 411089 411400 . + 0 ID=cds-WP_075239745.1;Parent=gene-IXO1104_RS01830;Dbxref=Genbank:WP_075239745.1;Name=WP_075239745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112733.1;locus_tag=IXO1104_RS01830;product=DUF3649 domain-containing protein;protein_id=WP_075239745.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 411397 413028 . + . ID=gene-IXO1104_RS01835;Name=IXO1104_RS01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01835;old_locus_tag=IXO1104_01800;pseudo=true NZ_CP047492.1 Protein Homology CDS 411397 413028 . + 0 ID=cds-IXO1104_RS01835;Parent=gene-IXO1104_RS01835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156921.1;locus_tag=IXO1104_RS01835;product=PepSY domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 413025 413360 . + . ID=gene-IXO1104_RS01840;Name=IXO1104_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01840;old_locus_tag=IXO1104_01805 NZ_CP047492.1 Protein Homology CDS 413025 413360 . + 0 ID=cds-WP_011260672.1;Parent=gene-IXO1104_RS01840;Dbxref=Genbank:WP_011260672.1;Name=WP_011260672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156920.1;locus_tag=IXO1104_RS01840;product=DUF3325 domain-containing protein;protein_id=WP_011260672.1;transl_table=11 NZ_CP047492.1 RefSeq gene 413403 413591 . + . ID=gene-IXO1104_RS01845;Name=IXO1104_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01845 NZ_CP047492.1 GeneMarkS-2+ CDS 413403 413591 . + 0 ID=cds-WP_012443812.1;Parent=gene-IXO1104_RS01845;Dbxref=Genbank:WP_012443812.1;Name=WP_012443812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS01845;product=hypothetical protein;protein_id=WP_012443812.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 413681 413879 . - . ID=gene-IXO1104_RS01850;Name=IXO1104_RS01850;end_range=413879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01850;old_locus_tag=IXO1104_01810;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 413681 413879 . - 0 ID=cds-IXO1104_RS01850;Parent=gene-IXO1104_RS01850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=413879,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050204.1;locus_tag=IXO1104_RS01850;partial=true;product=RES family NAD+ phosphorylase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 413922 414542 . - . ID=gene-IXO1104_RS01855;Name=IXO1104_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01855;old_locus_tag=IXO1104_01815 NZ_CP047492.1 Protein Homology CDS 413922 414542 . - 0 ID=cds-WP_011409694.1;Parent=gene-IXO1104_RS01855;Dbxref=Genbank:WP_011409694.1;Name=WP_011409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921138.1;locus_tag=IXO1104_RS01855;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011409694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 414671 415834 . + . ID=gene-IXO1104_RS01860;Name=IXO1104_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01860;old_locus_tag=IXO1104_01820 NZ_CP047492.1 Protein Homology CDS 414671 415834 . + 0 ID=cds-WP_011260670.1;Parent=gene-IXO1104_RS01860;Dbxref=Genbank:WP_011260670.1;Name=WP_011260670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450091.1;locus_tag=IXO1104_RS01860;product=isovaleryl-CoA dehydrogenase;protein_id=WP_011260670.1;transl_table=11 NZ_CP047492.1 RefSeq gene 415845 417455 . + . ID=gene-IXO1104_RS01865;Name=IXO1104_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01865;old_locus_tag=IXO1104_01825 NZ_CP047492.1 Protein Homology CDS 415845 417455 . + 0 ID=cds-WP_011260669.1;Parent=gene-IXO1104_RS01865;Dbxref=Genbank:WP_011260669.1;Name=WP_011260669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437049.1;locus_tag=IXO1104_RS01865;product=methylcrotonoyl-CoA carboxylase;protein_id=WP_011260669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 417698 419725 . + . ID=gene-IXO1104_RS01870;Name=IXO1104_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01870;old_locus_tag=IXO1104_01830 NZ_CP047492.1 Protein Homology CDS 417698 419725 . + 0 ID=cds-WP_075239746.1;Parent=gene-IXO1104_RS01870;Dbxref=Genbank:WP_075239746.1;Name=WP_075239746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089033.1;locus_tag=IXO1104_RS01870;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_075239746.1;transl_table=11 NZ_CP047492.1 RefSeq gene 419825 421909 . + . ID=gene-IXO1104_RS01875;Name=IXO1104_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01875;old_locus_tag=IXO1104_01835 NZ_CP047492.1 Protein Homology CDS 419825 421909 . + 0 ID=cds-WP_011260667.1;Parent=gene-IXO1104_RS01875;Dbxref=Genbank:WP_011260667.1;Name=WP_011260667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572258.1;locus_tag=IXO1104_RS01875;product=S9 family peptidase;protein_id=WP_011260667.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 422196 423212 . - . ID=gene-IXO1104_RS01880;Name=IXO1104_RS01880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01880;old_locus_tag=IXO1104_01840;pseudo=true NZ_CP047492.1 Protein Homology CDS 422196 423212 . - 0 ID=cds-IXO1104_RS01880;Parent=gene-IXO1104_RS01880;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1104_RS01880;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 423252 423997 . + . ID=gene-IXO1104_RS01885;Name=IXO1104_RS01885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01885;old_locus_tag=IXO1104_01845;partial=true;pseudo=true;start_range=.,423252 NZ_CP047492.1 Protein Homology CDS 423252 423997 . + 0 ID=cds-IXO1104_RS01885;Parent=gene-IXO1104_RS01885;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011295755.1%2CRefSeq:WP_076611322.1;locus_tag=IXO1104_RS01885;partial=true;product=transposase;pseudo=true;start_range=.,423252;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 424059 424226 . - . ID=gene-IXO1104_RS01890;Name=IXO1104_RS01890;end_range=424226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01890;old_locus_tag=IXO1104_01850;partial=true;pseudo=true;start_range=.,424059 NZ_CP047492.1 Protein Homology CDS 424059 424226 . - 0 ID=cds-IXO1104_RS01890;Parent=gene-IXO1104_RS01890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=424226,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS01890;partial=true;product=transposase;pseudo=true;start_range=.,424059;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 424297 425396 . + . ID=gene-IXO1104_RS01895;Name=IXO1104_RS01895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01895;old_locus_tag=IXO1104_01855;pseudo=true NZ_CP047492.1 Protein Homology CDS 424297 425396 . + 0 ID=cds-IXO1104_RS01895;Parent=gene-IXO1104_RS01895;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS01895;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 425694 425876 . - . ID=gene-IXO1104_RS01900;Name=IXO1104_RS01900;end_range=425876,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01900;old_locus_tag=IXO1104_01860;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 425694 425876 . - 0 ID=cds-IXO1104_RS01900;Parent=gene-IXO1104_RS01900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=425876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445996.1;locus_tag=IXO1104_RS01900;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 425875 426432 . + . ID=gene-IXO1104_RS01905;Name=IXO1104_RS01905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01905;old_locus_tag=IXO1104_01865;partial=true;pseudo=true;start_range=.,425875 NZ_CP047492.1 Protein Homology CDS 425875 426432 . + 0 ID=cds-IXO1104_RS01905;Parent=gene-IXO1104_RS01905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS01905;partial=true;product=transposase;pseudo=true;start_range=.,425875;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 426453 426569 . - . ID=gene-IXO1104_RS01910;Name=IXO1104_RS01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01910;partial=true;pseudo=true;start_range=.,426453 NZ_CP047492.1 Protein Homology CDS 426453 426569 . - 0 ID=cds-IXO1104_RS01910;Parent=gene-IXO1104_RS01910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS01910;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,426453;transl_table=11 NZ_CP047492.1 RefSeq gene 426695 428014 . + . ID=gene-IXO1104_RS01915;Name=IXO1104_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01915;old_locus_tag=IXO1104_01870 NZ_CP047492.1 Protein Homology CDS 426695 428014 . + 0 ID=cds-WP_133264490.1;Parent=gene-IXO1104_RS01915;Dbxref=Genbank:WP_133264490.1;Name=WP_133264490.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS01915;product=IS701 family transposase;protein_id=WP_133264490.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 428098 428445 . - . ID=gene-IXO1104_RS01920;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=pseudogene;locus_tag=IXO1104_RS01920;partial=true;pseudo=true;start_range=.,428098 NZ_CP047492.1 Protein Homology CDS 428098 428445 . - 0 ID=cds-IXO1104_RS01920;Parent=gene-IXO1104_RS01920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370375.1;locus_tag=IXO1104_RS01920;partial=true;product=hydroxyisourate hydrolase;pseudo=true;start_range=.,428098;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 428458 428874 . - . ID=gene-IXO1104_RS01925;Name=IXO1104_RS01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01925;partial=true;pseudo=true;start_range=.,428458 NZ_CP047492.1 Protein Homology CDS 428458 428874 . - 0 ID=cds-IXO1104_RS01925;Parent=gene-IXO1104_RS01925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509374.1;locus_tag=IXO1104_RS01925;partial=true;product=FAD/NAD(P)-binding protein;pseudo=true;start_range=.,428458;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 428874 429410 . - . ID=gene-IXO1104_RS01930;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=pseudogene;locus_tag=IXO1104_RS01930;old_locus_tag=IXO1104_01880;partial=true;pseudo=true;start_range=.,428874 NZ_CP047492.1 Protein Homology CDS 428874 429410 . - 0 ID=cds-IXO1104_RS01930;Parent=gene-IXO1104_RS01930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572333.1;locus_tag=IXO1104_RS01930;partial=true;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;pseudo=true;start_range=.,428874;transl_table=11 NZ_CP047492.1 RefSeq gene 429358 429753 . - . ID=gene-IXO1104_RS01935;Name=IXO1104_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01935;old_locus_tag=IXO1104_01885 NZ_CP047492.1 Protein Homology CDS 429358 429753 . - 0 ID=cds-WP_012443820.1;Parent=gene-IXO1104_RS01935;Dbxref=Genbank:WP_012443820.1;Name=WP_012443820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450976.1;locus_tag=IXO1104_RS01935;product=DUF3225 domain-containing protein;protein_id=WP_012443820.1;transl_table=11 NZ_CP047492.1 RefSeq gene 429750 430640 . - . ID=gene-IXO1104_RS01940;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=IXO1104_RS01940;old_locus_tag=IXO1104_01890 NZ_CP047492.1 Protein Homology CDS 429750 430640 . - 0 ID=cds-WP_011260661.1;Parent=gene-IXO1104_RS01940;Dbxref=Genbank:WP_011260661.1;Name=WP_011260661.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156075.1;locus_tag=IXO1104_RS01940;product=allantoinase PuuE;protein_id=WP_011260661.1;transl_table=11 NZ_CP047492.1 RefSeq gene 430637 431893 . - . ID=gene-IXO1104_RS01945;Name=IXO1104_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01945;old_locus_tag=IXO1104_01895 NZ_CP047492.1 Protein Homology CDS 430637 431893 . - 0 ID=cds-WP_011260660.1;Parent=gene-IXO1104_RS01945;Dbxref=Genbank:WP_011260660.1;Name=WP_011260660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379922.1;locus_tag=IXO1104_RS01945;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_011260660.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 431883 433089 . - . ID=gene-IXO1104_RS01950;Name=IXO1104_RS01950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01950;old_locus_tag=IXO1104_01900;pseudo=true NZ_CP047492.1 Protein Homology CDS 431883 433089 . - 0 ID=cds-IXO1104_RS01950;Parent=gene-IXO1104_RS01950;Note=frameshifted%3B internal stop;Ontology_term=GO:0016813;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167651.1;locus_tag=IXO1104_RS01950;product=allantoate amidohydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 433254 434312 . - . ID=gene-IXO1104_RS01955;Name=IXO1104_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01955;old_locus_tag=IXO1104_01905 NZ_CP047492.1 Protein Homology CDS 433254 434312 . - 0 ID=cds-WP_133264493.1;Parent=gene-IXO1104_RS01955;Dbxref=Genbank:WP_133264493.1;Name=WP_133264493.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS01955;product=IS630 family transposase;protein_id=WP_133264493.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 434336 434584 . - . ID=gene-IXO1104_RS01960;Name=IXO1104_RS01960;end_range=434584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01960;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 434336 434584 . - 0 ID=cds-IXO1104_RS01960;Parent=gene-IXO1104_RS01960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=434584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975014.1;locus_tag=IXO1104_RS01960;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 434862 435827 . + . ID=gene-IXO1104_RS01965;Name=IXO1104_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01965;old_locus_tag=IXO1104_01915 NZ_CP047492.1 Protein Homology CDS 434862 435827 . + 0 ID=cds-WP_133264495.1;Parent=gene-IXO1104_RS01965;Dbxref=Genbank:WP_133264495.1;Name=WP_133264495.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS01965;product=IS1595 family transposase;protein_id=WP_133264495.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 435898 436218 . + . ID=gene-IXO1104_RS01970;Name=IXO1104_RS01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS01970;old_locus_tag=IXO1104_01920;partial=true;pseudo=true;start_range=.,435898 NZ_CP047492.1 Protein Homology CDS 435898 436218 . + 0 ID=cds-IXO1104_RS01970;Parent=gene-IXO1104_RS01970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156071.1;locus_tag=IXO1104_RS01970;partial=true;product=alpha/beta hydrolase;pseudo=true;start_range=.,435898;transl_table=11 NZ_CP047492.1 RefSeq gene 436330 438837 . + . ID=gene-IXO1104_RS01975;Name=IXO1104_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01975;old_locus_tag=IXO1104_01925 NZ_CP047492.1 Protein Homology CDS 436330 438837 . + 0 ID=cds-WP_011260655.1;Parent=gene-IXO1104_RS01975;Dbxref=Genbank:WP_011260655.1;Name=WP_011260655.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505094.1;locus_tag=IXO1104_RS01975;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_011260655.1;transl_table=11 NZ_CP047492.1 RefSeq gene 438878 438956 . - . ID=gene-IXO1104_RS01980;Name=IXO1104_RS01980;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS01980;old_locus_tag=IXO1104_01930 NZ_CP047492.1 cmsearch ncRNA 438878 438956 . - . ID=rna-IXO1104_RS01980;Parent=gene-IXO1104_RS01980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01980;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 438878 438956 . - . ID=exon-IXO1104_RS01980-1;Parent=rna-IXO1104_RS01980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01980;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 439016 439474 . - . ID=gene-IXO1104_RS01985;Name=IXO1104_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01985;old_locus_tag=IXO1104_01935 NZ_CP047492.1 Protein Homology CDS 439016 439474 . - 0 ID=cds-WP_012443823.1;Parent=gene-IXO1104_RS01985;Dbxref=Genbank:WP_012443823.1;Name=WP_012443823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968357.1;locus_tag=IXO1104_RS01985;product=hypothetical protein;protein_id=WP_012443823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 439920 440732 . + . ID=gene-IXO1104_RS01990;Name=IXO1104_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS01990;old_locus_tag=IXO1104_01940 NZ_CP047492.1 Protein Homology CDS 439920 440732 . + 0 ID=cds-WP_011409682.1;Parent=gene-IXO1104_RS01990;Dbxref=Genbank:WP_011409682.1;Name=WP_011409682.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409682.1;locus_tag=IXO1104_RS01990;product=TatD family hydrolase;protein_id=WP_011409682.1;transl_table=11 NZ_CP047492.1 RefSeq gene 440727 440802 . - . ID=gene-IXO1104_RS01995;Name=IXO1104_RS01995;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS01995;old_locus_tag=IXO1104_01945 NZ_CP047492.1 cmsearch ncRNA 440727 440802 . - . ID=rna-IXO1104_RS01995;Parent=gene-IXO1104_RS01995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01995;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 440727 440802 . - . ID=exon-IXO1104_RS01995-1;Parent=rna-IXO1104_RS01995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS01995;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 440869 441122 . - . ID=gene-IXO1104_RS02000;Name=IXO1104_RS02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02000;partial=true;pseudo=true;start_range=.,440869 NZ_CP047492.1 Protein Homology CDS 440869 441122 . - 0 ID=cds-IXO1104_RS02000;Parent=gene-IXO1104_RS02000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848809.1;locus_tag=IXO1104_RS02000;partial=true;product=hypothetical protein;pseudo=true;start_range=.,440869;transl_table=11 NZ_CP047492.1 RefSeq gene 441601 442488 . - . ID=gene-IXO1104_RS02005;Name=IXO1104_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02005;old_locus_tag=IXO1104_01955 NZ_CP047492.1 Protein Homology CDS 441601 442488 . - 0 ID=cds-WP_012443827.1;Parent=gene-IXO1104_RS02005;Dbxref=Genbank:WP_012443827.1;Name=WP_012443827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167667.1;locus_tag=IXO1104_RS02005;product=LysR family transcriptional regulator;protein_id=WP_012443827.1;transl_table=11 NZ_CP047492.1 RefSeq gene 442585 443865 . + . ID=gene-IXO1104_RS02010;Name=IXO1104_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02010;old_locus_tag=IXO1104_01960 NZ_CP047492.1 Protein Homology CDS 442585 443865 . + 0 ID=cds-WP_027703434.1;Parent=gene-IXO1104_RS02010;Dbxref=Genbank:WP_027703434.1;Name=WP_027703434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471612.1;locus_tag=IXO1104_RS02010;product=MFS transporter;protein_id=WP_027703434.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 443930 444303 . - . ID=gene-IXO1104_RS02015;Name=IXO1104_RS02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02015;old_locus_tag=IXO1104_01965;partial=true;pseudo=true;start_range=.,443930 NZ_CP047492.1 Protein Homology CDS 443930 444303 . - 0 ID=cds-IXO1104_RS02015;Parent=gene-IXO1104_RS02015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160393.1;locus_tag=IXO1104_RS02015;partial=true;product=MerR family transcriptional regulator;pseudo=true;start_range=.,443930;transl_table=11 NZ_CP047492.1 RefSeq gene 444759 445640 . + . ID=gene-IXO1104_RS02020;Name=IXO1104_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02020;old_locus_tag=IXO1104_01970 NZ_CP047492.1 Protein Homology CDS 444759 445640 . + 0 ID=cds-WP_011260648.1;Parent=gene-IXO1104_RS02020;Dbxref=Genbank:WP_011260648.1;Name=WP_011260648.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920008.1;locus_tag=IXO1104_RS02020;product=NAD-dependent protein deacetylase;protein_id=WP_011260648.1;transl_table=11 NZ_CP047492.1 RefSeq gene 445699 446817 . + . ID=gene-IXO1104_RS02025;Name=IXO1104_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02025;old_locus_tag=IXO1104_01975 NZ_CP047492.1 Protein Homology CDS 445699 446817 . + 0 ID=cds-WP_011260647.1;Parent=gene-IXO1104_RS02025;Dbxref=Genbank:WP_011260647.1;Name=WP_011260647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302131.1;locus_tag=IXO1104_RS02025;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_011260647.1;transl_table=11 NZ_CP047492.1 RefSeq gene 446855 447733 . + . ID=gene-IXO1104_RS02030;Name=IXO1104_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02030;old_locus_tag=IXO1104_01980 NZ_CP047492.1 Protein Homology CDS 446855 447733 . + 0 ID=cds-WP_011260646.1;Parent=gene-IXO1104_RS02030;Dbxref=Genbank:WP_011260646.1;Name=WP_011260646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304345.1;locus_tag=IXO1104_RS02030;product=NAD(P)-dependent oxidoreductase;protein_id=WP_011260646.1;transl_table=11 NZ_CP047492.1 RefSeq gene 447757 447832 . - . ID=gene-IXO1104_RS02035;Name=IXO1104_RS02035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02035;old_locus_tag=IXO1104_01985 NZ_CP047492.1 cmsearch ncRNA 447757 447832 . - . ID=rna-IXO1104_RS02035;Parent=gene-IXO1104_RS02035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02035;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 447757 447832 . - . ID=exon-IXO1104_RS02035-1;Parent=rna-IXO1104_RS02035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02035;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 447816 447889 . + . ID=gene-IXO1104_RS02040;Name=IXO1104_RS02040;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02040;old_locus_tag=IXO1104_01990 NZ_CP047492.1 cmsearch ncRNA 447816 447889 . + . ID=rna-IXO1104_RS02040;Parent=gene-IXO1104_RS02040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02040;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 447816 447889 . + . ID=exon-IXO1104_RS02040-1;Parent=rna-IXO1104_RS02040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02040;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 448085 448474 . + . ID=gene-IXO1104_RS02045;Name=IXO1104_RS02045;end_range=448474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02045;old_locus_tag=IXO1104_01995;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 448085 448474 . + 0 ID=cds-IXO1104_RS02045;Parent=gene-IXO1104_RS02045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=448474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304344.1;locus_tag=IXO1104_RS02045;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 448696 449547 . + . ID=gene-IXO1104_RS02050;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=IXO1104_RS02050;old_locus_tag=IXO1104_02000 NZ_CP047492.1 Protein Homology CDS 448696 449547 . + 0 ID=cds-WP_011409678.1;Parent=gene-IXO1104_RS02050;Dbxref=Genbank:WP_011409678.1;Name=WP_011409678.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237160.1;locus_tag=IXO1104_RS02050;product=formyltetrahydrofolate deformylase;protein_id=WP_011409678.1;transl_table=11 NZ_CP047492.1 RefSeq gene 449626 450333 . - . ID=gene-IXO1104_RS02055;Name=IXO1104_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02055;old_locus_tag=IXO1104_02005 NZ_CP047492.1 Protein Homology CDS 449626 450333 . - 0 ID=cds-WP_011409677.1;Parent=gene-IXO1104_RS02055;Dbxref=Genbank:WP_011409677.1;Name=WP_011409677.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505080.1;locus_tag=IXO1104_RS02055;product=response regulator;protein_id=WP_011409677.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 450366 450997 . - . ID=gene-IXO1104_RS02060;Name=IXO1104_RS02060;end_range=450997,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02060;old_locus_tag=IXO1104_02010;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 450366 450997 . - 0 ID=cds-IXO1104_RS02060;Parent=gene-IXO1104_RS02060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=450997,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346030.1;locus_tag=IXO1104_RS02060;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 451023 451907 . - . ID=gene-IXO1104_RS02065;Name=IXO1104_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02065;old_locus_tag=IXO1104_02015 NZ_CP047492.1 Protein Homology CDS 451023 451907 . - 0 ID=cds-WP_011409675.1;Parent=gene-IXO1104_RS02065;Dbxref=Genbank:WP_011409675.1;Name=WP_011409675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574893.1;locus_tag=IXO1104_RS02065;product=methylenetetrahydrofolate reductase;protein_id=WP_011409675.1;transl_table=11 NZ_CP047492.1 RefSeq gene 452096 452172 . + . ID=gene-IXO1104_RS02070;Name=IXO1104_RS02070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02070;old_locus_tag=IXO1104_02020 NZ_CP047492.1 cmsearch ncRNA 452096 452172 . + . ID=rna-IXO1104_RS02070;Parent=gene-IXO1104_RS02070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02070;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 452096 452172 . + . ID=exon-IXO1104_RS02070-1;Parent=rna-IXO1104_RS02070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02070;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 452177 452842 . - . ID=gene-IXO1104_RS02075;Name=IXO1104_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02075;old_locus_tag=IXO1104_02025 NZ_CP047492.1 Protein Homology CDS 452177 452842 . - 0 ID=cds-WP_011260641.1;Parent=gene-IXO1104_RS02075;Dbxref=Genbank:WP_011260641.1;Name=WP_011260641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346036.1;locus_tag=IXO1104_RS02075;product=epoxyqueuosine reductase QueH;protein_id=WP_011260641.1;transl_table=11 NZ_CP047492.1 RefSeq gene 452842 453756 . - . ID=gene-IXO1104_RS02080;Name=IXO1104_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02080;old_locus_tag=IXO1104_02030 NZ_CP047492.1 Protein Homology CDS 452842 453756 . - 0 ID=cds-WP_011409674.1;Parent=gene-IXO1104_RS02080;Dbxref=Genbank:WP_011409674.1;Name=WP_011409674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089083.1;locus_tag=IXO1104_RS02080;product=LysR family transcriptional regulator;protein_id=WP_011409674.1;transl_table=11 NZ_CP047492.1 RefSeq gene 453947 454540 . + . ID=gene-IXO1104_RS02085;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=IXO1104_RS02085;old_locus_tag=IXO1104_02035 NZ_CP047492.1 Protein Homology CDS 453947 454540 . + 0 ID=cds-WP_011409673.1;Parent=gene-IXO1104_RS02085;Dbxref=Genbank:WP_011409673.1;Name=WP_011409673.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574899.1;locus_tag=IXO1104_RS02085;product=FMN reductase;protein_id=WP_011409673.1;transl_table=11 NZ_CP047492.1 RefSeq gene 454683 455666 . + . ID=gene-IXO1104_RS02090;Name=IXO1104_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02090;old_locus_tag=IXO1104_02040 NZ_CP047492.1 Protein Homology CDS 454683 455666 . + 0 ID=cds-WP_011409672.1;Parent=gene-IXO1104_RS02090;Dbxref=Genbank:WP_011409672.1;Name=WP_011409672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089084.1;locus_tag=IXO1104_RS02090;product=DUF1852 domain-containing protein;protein_id=WP_011409672.1;transl_table=11 NZ_CP047492.1 RefSeq gene 455694 456722 . + . ID=gene-IXO1104_RS02095;Name=IXO1104_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02095;old_locus_tag=IXO1104_02045 NZ_CP047492.1 Protein Homology CDS 455694 456722 . + 0 ID=cds-WP_012443837.1;Parent=gene-IXO1104_RS02095;Dbxref=Genbank:WP_012443837.1;Name=WP_012443837.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369054.1;locus_tag=IXO1104_RS02095;product=methionine synthase;protein_id=WP_012443837.1;transl_table=11 NZ_CP047492.1 RefSeq gene 456929 457885 . - . ID=gene-IXO1104_RS02100;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=IXO1104_RS02100;old_locus_tag=IXO1104_02050 NZ_CP047492.1 Protein Homology CDS 456929 457885 . - 0 ID=cds-WP_011260636.1;Parent=gene-IXO1104_RS02100;Dbxref=Genbank:WP_011260636.1;Name=WP_011260636.1;Ontology_term=GO:0046411,GO:0015649;gbkey=CDS;gene=kdgT;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260636.1;locus_tag=IXO1104_RS02100;product=2-keto-3-deoxygluconate transporter;protein_id=WP_011260636.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 458034 459486 . - . ID=gene-IXO1104_RS02105;Name=IXO1104_RS02105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02105;old_locus_tag=IXO1104_02055;pseudo=true NZ_CP047492.1 Protein Homology CDS 458034 459486 . - 0 ID=cds-IXO1104_RS02105;Parent=gene-IXO1104_RS02105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488991.1;locus_tag=IXO1104_RS02105;product=OprO/OprP family phosphate-selective porin;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 460309 461187 . - . ID=gene-IXO1104_RS02110;Name=IXO1104_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02110;old_locus_tag=IXO1104_02060 NZ_CP047492.1 Protein Homology CDS 460309 461187 . - 0 ID=cds-WP_011409669.1;Parent=gene-IXO1104_RS02110;Dbxref=Genbank:WP_011409669.1;Name=WP_011409669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409669.1;locus_tag=IXO1104_RS02110;product=SDR family oxidoreductase;protein_id=WP_011409669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 461323 461754 . + . ID=gene-IXO1104_RS02115;Name=IXO1104_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02115;old_locus_tag=IXO1104_02065 NZ_CP047492.1 Protein Homology CDS 461323 461754 . + 0 ID=cds-WP_011260634.1;Parent=gene-IXO1104_RS02115;Dbxref=Genbank:WP_011260634.1;Name=WP_011260634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505072.1;locus_tag=IXO1104_RS02115;product=helix-turn-helix transcriptional regulator;protein_id=WP_011260634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 461972 462433 . - . ID=gene-IXO1104_RS02120;Name=IXO1104_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02120;old_locus_tag=IXO1104_02070 NZ_CP047492.1 Protein Homology CDS 461972 462433 . - 0 ID=cds-WP_011409668.1;Parent=gene-IXO1104_RS02120;Dbxref=Genbank:WP_011409668.1;Name=WP_011409668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153220.1;locus_tag=IXO1104_RS02120;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_011409668.1;transl_table=11 NZ_CP047492.1 RefSeq gene 462848 463441 . - . ID=gene-IXO1104_RS02125;Name=IXO1104_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02125;old_locus_tag=IXO1104_02080 NZ_CP047492.1 Protein Homology CDS 462848 463441 . - 0 ID=cds-WP_011260633.1;Parent=gene-IXO1104_RS02125;Dbxref=Genbank:WP_011260633.1;Name=WP_011260633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260633.1;locus_tag=IXO1104_RS02125;product=hypothetical protein;protein_id=WP_011260633.1;transl_table=11 NZ_CP047492.1 RefSeq gene 463438 464202 . - . ID=gene-IXO1104_RS02130;Name=IXO1104_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02130;old_locus_tag=IXO1104_02085 NZ_CP047492.1 Protein Homology CDS 463438 464202 . - 0 ID=cds-WP_228329591.1;Parent=gene-IXO1104_RS02130;Dbxref=Genbank:WP_228329591.1;Name=WP_228329591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849294.1;locus_tag=IXO1104_RS02130;product=hypothetical protein;protein_id=WP_228329591.1;transl_table=11 NZ_CP047492.1 RefSeq gene 464442 464518 . + . ID=gene-IXO1104_RS02135;Name=IXO1104_RS02135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02135;old_locus_tag=IXO1104_02090 NZ_CP047492.1 cmsearch ncRNA 464442 464518 . + . ID=rna-IXO1104_RS02135;Parent=gene-IXO1104_RS02135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02135;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 464442 464518 . + . ID=exon-IXO1104_RS02135-1;Parent=rna-IXO1104_RS02135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02135;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 464602 466962 . - . ID=gene-IXO1104_RS02140;Name=IXO1104_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02140;old_locus_tag=IXO1104_02095 NZ_CP047492.1 Protein Homology CDS 464602 466962 . - 0 ID=cds-WP_075240430.1;Parent=gene-IXO1104_RS02140;Dbxref=Genbank:WP_075240430.1;Name=WP_075240430.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809629.1;locus_tag=IXO1104_RS02140;product=S9 family peptidase;protein_id=WP_075240430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 467708 469054 . + . ID=gene-IXO1104_RS02145;Name=IXO1104_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02145;old_locus_tag=IXO1104_02100 NZ_CP047492.1 Protein Homology CDS 467708 469054 . + 0 ID=cds-WP_041182320.1;Parent=gene-IXO1104_RS02145;Dbxref=Genbank:WP_041182320.1;Name=WP_041182320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303711.1;locus_tag=IXO1104_RS02145;product=AMP-binding protein;protein_id=WP_041182320.1;transl_table=11 NZ_CP047492.1 RefSeq gene 469558 470466 . + . ID=gene-IXO1104_RS02150;Name=IXO1104_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02150;old_locus_tag=IXO1104_02105 NZ_CP047492.1 Protein Homology CDS 469558 470466 . + 0 ID=cds-WP_241846828.1;Parent=gene-IXO1104_RS02150;Dbxref=Genbank:WP_241846828.1;Name=WP_241846828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501625.1;locus_tag=IXO1104_RS02150;product=5'-nucleotidase;protein_id=WP_241846828.1;transl_table=11 NZ_CP047492.1 RefSeq gene 470709 471716 . - . ID=gene-IXO1104_RS02155;Name=IXO1104_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02155;old_locus_tag=IXO1104_02110 NZ_CP047492.1 Protein Homology CDS 470709 471716 . - 0 ID=cds-WP_011409665.1;Parent=gene-IXO1104_RS02155;Dbxref=Genbank:WP_011409665.1;Name=WP_011409665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487396.1;locus_tag=IXO1104_RS02155;product=pteridine-dependent deoxygenase like protein;protein_id=WP_011409665.1;transl_table=11 NZ_CP047492.1 RefSeq gene 471713 473062 . - . ID=gene-IXO1104_RS02160;Name=IXO1104_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02160;old_locus_tag=IXO1104_02115 NZ_CP047492.1 Protein Homology CDS 471713 473062 . - 0 ID=cds-WP_011409664.1;Parent=gene-IXO1104_RS02160;Dbxref=Genbank:WP_011409664.1;Name=WP_011409664.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117708.1;locus_tag=IXO1104_RS02160;product=FAD-dependent oxidoreductase;protein_id=WP_011409664.1;transl_table=11 NZ_CP047492.1 RefSeq gene 473365 473634 . + . ID=gene-IXO1104_RS02165;Name=xanC;gbkey=Gene;gene=xanC;gene_biotype=protein_coding;locus_tag=IXO1104_RS02165;old_locus_tag=IXO1104_02120 NZ_CP047492.1 Protein Homology CDS 473365 473634 . + 0 ID=cds-WP_011260626.1;Parent=gene-IXO1104_RS02165;Dbxref=Genbank:WP_011260626.1;Name=WP_011260626.1;gbkey=CDS;gene=xanC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300738.1;locus_tag=IXO1104_RS02165;product=xanthomonadin biosynthesis acyl carrier protein XanC;protein_id=WP_011260626.1;transl_table=11 NZ_CP047492.1 RefSeq gene 473672 474355 . + . ID=gene-IXO1104_RS02170;Name=IXO1104_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02170;old_locus_tag=IXO1104_02125 NZ_CP047492.1 Protein Homology CDS 473672 474355 . + 0 ID=cds-WP_012443853.1;Parent=gene-IXO1104_RS02170;Dbxref=Genbank:WP_012443853.1;Name=WP_012443853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443853.1;locus_tag=IXO1104_RS02170;product=ketosynthase;protein_id=WP_012443853.1;transl_table=11 NZ_CP047492.1 RefSeq gene 474409 475158 . + . ID=gene-IXO1104_RS02175;Name=IXO1104_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02175;old_locus_tag=IXO1104_02130 NZ_CP047492.1 Protein Homology CDS 474409 475158 . + 0 ID=cds-WP_011409662.1;Parent=gene-IXO1104_RS02175;Dbxref=Genbank:WP_011409662.1;Name=WP_011409662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348972.1;locus_tag=IXO1104_RS02175;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_011409662.1;transl_table=11 NZ_CP047492.1 RefSeq gene 475230 475457 . + . ID=gene-IXO1104_RS02180;Name=IXO1104_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02180;old_locus_tag=IXO1104_02135 NZ_CP047492.1 Protein Homology CDS 475230 475457 . + 0 ID=cds-WP_228329590.1;Parent=gene-IXO1104_RS02180;Dbxref=Genbank:WP_228329590.1;Name=WP_228329590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300741.1;locus_tag=IXO1104_RS02180;product=hypothetical protein;protein_id=WP_228329590.1;transl_table=11 NZ_CP047492.1 RefSeq gene 475454 476428 . + . ID=gene-IXO1104_RS02185;Name=IXO1104_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02185;old_locus_tag=IXO1104_02140 NZ_CP047492.1 Protein Homology CDS 475454 476428 . + 0 ID=cds-WP_011260623.1;Parent=gene-IXO1104_RS02185;Dbxref=Genbank:WP_011260623.1;Name=WP_011260623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260623.1;locus_tag=IXO1104_RS02185;product=acyltransferase;protein_id=WP_011260623.1;transl_table=11 NZ_CP047492.1 RefSeq gene 476379 476999 . + . ID=gene-IXO1104_RS02190;Name=IXO1104_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02190;old_locus_tag=IXO1104_02145 NZ_CP047492.1 Protein Homology CDS 476379 476999 . + 0 ID=cds-WP_027703430.1;Parent=gene-IXO1104_RS02190;Dbxref=Genbank:WP_027703430.1;Name=WP_027703430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994991.1;locus_tag=IXO1104_RS02190;product=hypothetical protein;protein_id=WP_027703430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 477138 479507 . + . ID=gene-IXO1104_RS02195;Name=IXO1104_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02195;old_locus_tag=IXO1104_02150 NZ_CP047492.1 Protein Homology CDS 477138 479507 . + 0 ID=cds-WP_041182859.1;Parent=gene-IXO1104_RS02195;Dbxref=Genbank:WP_041182859.1;Name=WP_041182859.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926484.1;locus_tag=IXO1104_RS02195;product=MMPL family transporter;protein_id=WP_041182859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 479494 479931 . + . ID=gene-IXO1104_RS02200;Name=IXO1104_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02200;old_locus_tag=IXO1104_02155 NZ_CP047492.1 Protein Homology CDS 479494 479931 . + 0 ID=cds-WP_011409659.1;Parent=gene-IXO1104_RS02200;Dbxref=Genbank:WP_011409659.1;Name=WP_011409659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850216.1;locus_tag=IXO1104_RS02200;product=phosphotransferase;protein_id=WP_011409659.1;transl_table=11 NZ_CP047492.1 RefSeq gene 480046 480122 . + . ID=gene-IXO1104_RS02205;Name=IXO1104_RS02205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02205;old_locus_tag=IXO1104_02160 NZ_CP047492.1 cmsearch ncRNA 480046 480122 . + . ID=rna-IXO1104_RS02205;Parent=gene-IXO1104_RS02205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02205;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 480046 480122 . + . ID=exon-IXO1104_RS02205-1;Parent=rna-IXO1104_RS02205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02205;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 480185 481217 . + . ID=gene-IXO1104_RS02210;Name=IXO1104_RS02210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02210;old_locus_tag=IXO1104_02165;pseudo=true NZ_CP047492.1 Protein Homology CDS 480185 481217 . + 0 ID=cds-IXO1104_RS02210;Parent=gene-IXO1104_RS02210;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1104_RS02210;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 481267 485124 . - . ID=gene-IXO1104_RS02215;Name=IXO1104_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02215;old_locus_tag=IXO1104_02170 NZ_CP047492.1 Protein Homology CDS 481267 485124 . - 0 ID=cds-WP_012443859.1;Parent=gene-IXO1104_RS02215;Dbxref=Genbank:WP_012443859.1;Name=WP_012443859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156059.1;locus_tag=IXO1104_RS02215;product=translocation/assembly module TamB;protein_id=WP_012443859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 485121 486902 . - . ID=gene-IXO1104_RS02220;Name=IXO1104_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02220;old_locus_tag=IXO1104_02175 NZ_CP047492.1 Protein Homology CDS 485121 486902 . - 0 ID=cds-WP_075243056.1;Parent=gene-IXO1104_RS02220;Dbxref=Genbank:WP_075243056.1;Name=WP_075243056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349065.1;locus_tag=IXO1104_RS02220;product=autotransporter assembly complex protein TamA;protein_id=WP_075243056.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 486991 487128 . + . ID=gene-IXO1104_RS02225;Name=IXO1104_RS02225;end_range=487128,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02225;old_locus_tag=IXO1104_02180;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 486991 487128 . + 0 ID=cds-IXO1104_RS02225;Parent=gene-IXO1104_RS02225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=487128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS02225;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 487195 488294 . + . ID=gene-IXO1104_RS02230;Name=IXO1104_RS02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02230;old_locus_tag=IXO1104_02185;pseudo=true NZ_CP047492.1 Protein Homology CDS 487195 488294 . + 0 ID=cds-IXO1104_RS02230;Parent=gene-IXO1104_RS02230;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02230;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 488517 490406 . - . ID=gene-IXO1104_RS02235;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=IXO1104_RS02235;old_locus_tag=IXO1104_02190 NZ_CP047492.1 Protein Homology CDS 488517 490406 . - 0 ID=cds-WP_012443863.1;Parent=gene-IXO1104_RS02235;Dbxref=Genbank:WP_012443863.1;Name=WP_012443863.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171708.1;locus_tag=IXO1104_RS02235;product=transcription termination factor Rho;protein_id=WP_012443863.1;transl_table=11 NZ_CP047492.1 RefSeq gene 490623 490964 . - . ID=gene-IXO1104_RS02240;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=IXO1104_RS02240;old_locus_tag=IXO1104_02195 NZ_CP047492.1 Protein Homology CDS 490623 490964 . - 0 ID=cds-WP_011260615.1;Parent=gene-IXO1104_RS02240;Dbxref=Genbank:WP_011260615.1;Name=WP_011260615.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159364.1;locus_tag=IXO1104_RS02240;product=thioredoxin TrxA;protein_id=WP_011260615.1;transl_table=11 NZ_CP047492.1 RefSeq gene 491163 492887 . + . ID=gene-IXO1104_RS02245;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=IXO1104_RS02245;old_locus_tag=IXO1104_02200 NZ_CP047492.1 Protein Homology CDS 491163 492887 . + 0 ID=cds-WP_011260614.1;Parent=gene-IXO1104_RS02245;Dbxref=Genbank:WP_011260614.1;Name=WP_011260614.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157031.1;locus_tag=IXO1104_RS02245;product=ATP-dependent RNA helicase RhlB;protein_id=WP_011260614.1;transl_table=11 NZ_CP047492.1 RefSeq gene 492963 493649 . + . ID=gene-IXO1104_RS02250;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=IXO1104_RS02250;old_locus_tag=IXO1104_02205 NZ_CP047492.1 Protein Homology CDS 492963 493649 . + 0 ID=cds-WP_011409654.1;Parent=gene-IXO1104_RS02250;Dbxref=Genbank:WP_011409654.1;Name=WP_011409654.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1;locus_tag=IXO1104_RS02250;product=cell division ATP-binding protein FtsE;protein_id=WP_011409654.1;transl_table=11 NZ_CP047492.1 RefSeq gene 493646 494596 . + . ID=gene-IXO1104_RS02255;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=IXO1104_RS02255;old_locus_tag=IXO1104_02210 NZ_CP047492.1 Protein Homology CDS 493646 494596 . + 0 ID=cds-WP_011260612.1;Parent=gene-IXO1104_RS02255;Dbxref=Genbank:WP_011260612.1;Name=WP_011260612.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1;locus_tag=IXO1104_RS02255;product=permease-like cell division protein FtsX;protein_id=WP_011260612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 494605 495447 . + . ID=gene-IXO1104_RS02260;Name=IXO1104_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02260;old_locus_tag=IXO1104_02215 NZ_CP047492.1 Protein Homology CDS 494605 495447 . + 0 ID=cds-WP_011409653.1;Parent=gene-IXO1104_RS02260;Dbxref=Genbank:WP_011409653.1;Name=WP_011409653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903686.1;locus_tag=IXO1104_RS02260;product=response regulator;protein_id=WP_011409653.1;transl_table=11 NZ_CP047492.1 RefSeq gene 495444 496169 . + . ID=gene-IXO1104_RS02265;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=IXO1104_RS02265;old_locus_tag=IXO1104_02220 NZ_CP047492.1 Protein Homology CDS 495444 496169 . + 0 ID=cds-WP_011260610.1;Parent=gene-IXO1104_RS02265;Dbxref=Genbank:WP_011260610.1;Name=WP_011260610.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157034.1;locus_tag=IXO1104_RS02265;product=uracil-DNA glycosylase;protein_id=WP_011260610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 496368 497243 . + . ID=gene-IXO1104_RS02270;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=IXO1104_RS02270;old_locus_tag=IXO1104_02225 NZ_CP047492.1 Protein Homology CDS 496368 497243 . + 0 ID=cds-WP_010370120.1;Parent=gene-IXO1104_RS02270;Dbxref=Genbank:WP_010370120.1;Name=WP_010370120.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1;locus_tag=IXO1104_RS02270;product=RNA polymerase sigma factor RpoH;protein_id=WP_010370120.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 497325 497937 . - . ID=gene-IXO1104_RS02275;Name=IXO1104_RS02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02275;old_locus_tag=IXO1104_02230;partial=true;pseudo=true;start_range=.,497325 NZ_CP047492.1 Protein Homology CDS 497325 497937 . - 0 ID=cds-IXO1104_RS02275;Parent=gene-IXO1104_RS02275;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017913975.1;locus_tag=IXO1104_RS02275;partial=true;product=trimeric intracellular cation channel family protein;pseudo=true;start_range=.,497325;transl_table=11 NZ_CP047492.1 RefSeq gene 497987 499279 . - . ID=gene-IXO1104_RS02280;Name=IXO1104_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02280;old_locus_tag=IXO1104_02235 NZ_CP047492.1 Protein Homology CDS 497987 499279 . - 0 ID=cds-WP_027704255.1;Parent=gene-IXO1104_RS02280;Dbxref=Genbank:WP_027704255.1;Name=WP_027704255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157036.1;locus_tag=IXO1104_RS02280;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_027704255.1;transl_table=11 NZ_CP047492.1 RefSeq gene 499640 499936 . + . ID=gene-IXO1104_RS02285;Name=IXO1104_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02285;old_locus_tag=IXO1104_02240 NZ_CP047492.1 Protein Homology CDS 499640 499936 . + 0 ID=cds-WP_243743227.1;Parent=gene-IXO1104_RS02285;Dbxref=Genbank:WP_243743227.1;Name=WP_243743227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260606.1;locus_tag=IXO1104_RS02285;product=hypothetical protein;protein_id=WP_243743227.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 499933 500763 . + . ID=gene-IXO1104_RS02290;Name=IXO1104_RS02290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02290;old_locus_tag=IXO1104_02245;pseudo=true NZ_CP047492.1 Protein Homology CDS 499933 500763 . + 0 ID=cds-IXO1104_RS02290;Parent=gene-IXO1104_RS02290;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157037.1;locus_tag=IXO1104_RS02290;product=NYN domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 500822 501414 . + . ID=gene-IXO1104_RS02295;Name=IXO1104_RS02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02295;old_locus_tag=IXO1104_02250;partial=true;pseudo=true;start_range=.,500822 NZ_CP047492.1 Protein Homology CDS 500822 501414 . + 0 ID=cds-IXO1104_RS02295;Parent=gene-IXO1104_RS02295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS02295;partial=true;product=transposase;pseudo=true;start_range=.,500822;transl_table=11 NZ_CP047492.1 RefSeq gene 501812 502099 . + . ID=gene-IXO1104_RS02300;Name=IXO1104_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02300;old_locus_tag=IXO1104_02255 NZ_CP047492.1 Protein Homology CDS 501812 502099 . + 0 ID=cds-WP_003483210.1;Parent=gene-IXO1104_RS02300;Dbxref=Genbank:WP_003483210.1;Name=WP_003483210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1;locus_tag=IXO1104_RS02300;product=co-chaperone GroES;protein_id=WP_003483210.1;transl_table=11 NZ_CP047492.1 RefSeq gene 502236 503876 . + . ID=gene-IXO1104_RS02305;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=IXO1104_RS02305;old_locus_tag=IXO1104_02260 NZ_CP047492.1 Protein Homology CDS 502236 503876 . + 0 ID=cds-WP_011260602.1;Parent=gene-IXO1104_RS02305;Dbxref=Genbank:WP_011260602.1;Name=WP_011260602.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=IXO1104_RS02305;product=chaperonin GroEL;protein_id=WP_011260602.1;transl_table=11 NZ_CP047492.1 RefSeq gene 504177 506285 . - . ID=gene-IXO1104_RS02310;Name=IXO1104_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02310;old_locus_tag=IXO1104_02265 NZ_CP047492.1 Protein Homology CDS 504177 506285 . - 0 ID=cds-WP_033013645.1;Parent=gene-IXO1104_RS02310;Dbxref=Genbank:WP_033013645.1;Name=WP_033013645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260601.1;locus_tag=IXO1104_RS02310;product=hypothetical protein;protein_id=WP_033013645.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 506661 509450 . + . ID=gene-IXO1104_RS02315;Name=IXO1104_RS02315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02315;pseudo=true NZ_CP047492.1 Protein Homology CDS 506661 509450 . + 0 ID=cds-IXO1104_RS02315;Parent=gene-IXO1104_RS02315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237029.1;locus_tag=IXO1104_RS02315;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 509455 509531 . - . ID=gene-IXO1104_RS02320;Name=IXO1104_RS02320;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02320;old_locus_tag=IXO1104_02280 NZ_CP047492.1 cmsearch ncRNA 509455 509531 . - . ID=rna-IXO1104_RS02320;Parent=gene-IXO1104_RS02320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02320;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 509455 509531 . - . ID=exon-IXO1104_RS02320-1;Parent=rna-IXO1104_RS02320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02320;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 510326 511399 . + . ID=gene-IXO1104_RS02325;Name=IXO1104_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02325;old_locus_tag=IXO1104_02285 NZ_CP047492.1 Protein Homology CDS 510326 511399 . + 0 ID=cds-WP_011260598.1;Parent=gene-IXO1104_RS02325;Dbxref=Genbank:WP_011260598.1;Name=WP_011260598.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089228.1;locus_tag=IXO1104_RS02325;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_011260598.1;transl_table=11 NZ_CP047492.1 RefSeq gene 511432 511641 . + . ID=gene-IXO1104_RS02330;Name=IXO1104_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02330;old_locus_tag=IXO1104_02290 NZ_CP047492.1 GeneMarkS-2+ CDS 511432 511641 . + 0 ID=cds-WP_125168770.1;Parent=gene-IXO1104_RS02330;Dbxref=Genbank:WP_125168770.1;Name=WP_125168770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS02330;product=hypothetical protein;protein_id=WP_125168770.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 511987 513362 . + . ID=gene-IXO1104_RS02335;Name=IXO1104_RS02335;end_range=513362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02335;old_locus_tag=IXO1104_02300;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 511987 513362 . + 0 ID=cds-IXO1104_RS02335;Parent=gene-IXO1104_RS02335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=513362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=IXO1104_RS02335;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 513369 514334 . - . ID=gene-IXO1104_RS02340;Name=IXO1104_RS02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02340;old_locus_tag=IXO1104_02305;pseudo=true NZ_CP047492.1 Protein Homology CDS 513369 514334 . - 0 ID=cds-IXO1104_RS02340;Parent=gene-IXO1104_RS02340;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS02340;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 514423 515229 . + . ID=gene-IXO1104_RS02345;Name=IXO1104_RS02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02345;old_locus_tag=IXO1104_02310;partial=true;pseudo=true;start_range=.,514423 NZ_CP047492.1 Protein Homology CDS 514423 515229 . + 0 ID=cds-IXO1104_RS02345;Parent=gene-IXO1104_RS02345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=IXO1104_RS02345;partial=true;product=hypothetical protein;pseudo=true;start_range=.,514423;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 515323 516930 . + . ID=gene-IXO1104_RS02350;Name=IXO1104_RS02350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02350;pseudo=true NZ_CP047492.1 Protein Homology CDS 515323 516930 . + 0 ID=cds-IXO1104_RS02350;Parent=gene-IXO1104_RS02350;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160243.1;locus_tag=IXO1104_RS02350;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 517254 518174 . - . ID=gene-IXO1104_RS02355;Name=IXO1104_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02355;old_locus_tag=IXO1104_02330 NZ_CP047492.1 Protein Homology CDS 517254 518174 . - 0 ID=cds-WP_011409642.1;Parent=gene-IXO1104_RS02355;Dbxref=Genbank:WP_011409642.1;Name=WP_011409642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929371.1;locus_tag=IXO1104_RS02355;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_011409642.1;transl_table=11 NZ_CP047492.1 RefSeq gene 518174 518692 . - . ID=gene-IXO1104_RS02360;Name=IXO1104_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02360;old_locus_tag=IXO1104_02335 NZ_CP047492.1 Protein Homology CDS 518174 518692 . - 0 ID=cds-WP_011260589.1;Parent=gene-IXO1104_RS02360;Dbxref=Genbank:WP_011260589.1;Name=WP_011260589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929373.1;locus_tag=IXO1104_RS02360;product=hypothetical protein;protein_id=WP_011260589.1;transl_table=11 NZ_CP047492.1 RefSeq gene 518854 521679 . + . ID=gene-IXO1104_RS02365;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=IXO1104_RS02365;old_locus_tag=IXO1104_02340 NZ_CP047492.1 Protein Homology CDS 518854 521679 . + 0 ID=cds-WP_011260588.1;Parent=gene-IXO1104_RS02365;Dbxref=Genbank:WP_011260588.1;Name=WP_011260588.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929375.1;locus_tag=IXO1104_RS02365;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_011260588.1;transl_table=11 NZ_CP047492.1 RefSeq gene 521775 522335 . - . ID=gene-IXO1104_RS02370;Name=IXO1104_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02370;old_locus_tag=IXO1104_02345 NZ_CP047492.1 Protein Homology CDS 521775 522335 . - 0 ID=cds-WP_011409640.1;Parent=gene-IXO1104_RS02370;Dbxref=Genbank:WP_011409640.1;Name=WP_011409640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409640.1;locus_tag=IXO1104_RS02370;product=VUT family protein;protein_id=WP_011409640.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 523591 525534 . + . ID=gene-IXO1104_RS02375;Name=IXO1104_RS02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02375;old_locus_tag=IXO1104_02350;pseudo=true NZ_CP047492.1 Protein Homology CDS 523591 525534 . + 0 ID=cds-IXO1104_RS02375;Parent=gene-IXO1104_RS02375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050384.1;locus_tag=IXO1104_RS02375;product=S53 family peptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 525643 526143 . - . ID=gene-IXO1104_RS02380;Name=IXO1104_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02380;old_locus_tag=IXO1104_02355 NZ_CP047492.1 Protein Homology CDS 525643 526143 . - 0 ID=cds-WP_027703830.1;Parent=gene-IXO1104_RS02380;Dbxref=Genbank:WP_027703830.1;Name=WP_027703830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409636.1;locus_tag=IXO1104_RS02380;product=hypothetical protein;protein_id=WP_027703830.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 526140 527007 . - . ID=gene-IXO1104_RS02385;Name=IXO1104_RS02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02385;old_locus_tag=IXO1104_02360;pseudo=true NZ_CP047492.1 Protein Homology CDS 526140 527007 . - 0 ID=cds-IXO1104_RS02385;Parent=gene-IXO1104_RS02385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089236.1;locus_tag=IXO1104_RS02385;product=DUF2145 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 527050 527997 . - . ID=gene-IXO1104_RS02390;Name=IXO1104_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02390;old_locus_tag=IXO1104_02365 NZ_CP047492.1 Protein Homology CDS 527050 527997 . - 0 ID=cds-WP_011409634.1;Parent=gene-IXO1104_RS02390;Dbxref=Genbank:WP_011409634.1;Name=WP_011409634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260582.1;locus_tag=IXO1104_RS02390;product=mitochondrial fission ELM1 family protein;protein_id=WP_011409634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 528131 528721 . + . ID=gene-IXO1104_RS02395;Name=IXO1104_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02395;old_locus_tag=IXO1104_02370 NZ_CP047492.1 Protein Homology CDS 528131 528721 . + 0 ID=cds-WP_012443887.1;Parent=gene-IXO1104_RS02395;Dbxref=Genbank:WP_012443887.1;Name=WP_012443887.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914114.1;locus_tag=IXO1104_RS02395;product=malonic semialdehyde reductase;protein_id=WP_012443887.1;transl_table=11 NZ_CP047492.1 RefSeq gene 528932 529684 . + . ID=gene-IXO1104_RS02400;Name=IXO1104_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02400;old_locus_tag=IXO1104_02375 NZ_CP047492.1 Protein Homology CDS 528932 529684 . + 0 ID=cds-WP_075240651.1;Parent=gene-IXO1104_RS02400;Dbxref=Genbank:WP_075240651.1;Name=WP_075240651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929381.1;locus_tag=IXO1104_RS02400;product=YceI family protein;protein_id=WP_075240651.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 529900 530075 . - . ID=gene-IXO1104_RS02405;Name=IXO1104_RS02405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02405;old_locus_tag=IXO1104_02380;partial=true;pseudo=true;start_range=.,529900 NZ_CP047492.1 Protein Homology CDS 529900 530075 . - 0 ID=cds-IXO1104_RS02405;Parent=gene-IXO1104_RS02405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155893.1;locus_tag=IXO1104_RS02405;partial=true;product=HAD family hydrolase;pseudo=true;start_range=.,529900;transl_table=11 NZ_CP047492.1 RefSeq gene 530170 530589 . - . ID=gene-IXO1104_RS02410;Name=IXO1104_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02410;old_locus_tag=IXO1104_02385 NZ_CP047492.1 Protein Homology CDS 530170 530589 . - 0 ID=cds-WP_011260579.1;Parent=gene-IXO1104_RS02410;Dbxref=Genbank:WP_011260579.1;Name=WP_011260579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483275.1;locus_tag=IXO1104_RS02410;product=STAS domain-containing protein;protein_id=WP_011260579.1;transl_table=11 NZ_CP047492.1 RefSeq gene 530586 531017 . - . ID=gene-IXO1104_RS02415;Name=IXO1104_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02415;old_locus_tag=IXO1104_02390 NZ_CP047492.1 Protein Homology CDS 530586 531017 . - 0 ID=cds-WP_012443890.1;Parent=gene-IXO1104_RS02415;Dbxref=Genbank:WP_012443890.1;Name=WP_012443890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917392.1;locus_tag=IXO1104_RS02415;product=ATP-binding protein;protein_id=WP_012443890.1;transl_table=11 NZ_CP047492.1 RefSeq gene 531014 533020 . - . ID=gene-IXO1104_RS02420;Name=IXO1104_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02420;old_locus_tag=IXO1104_02395 NZ_CP047492.1 Protein Homology CDS 531014 533020 . - 0 ID=cds-WP_011409630.1;Parent=gene-IXO1104_RS02420;Dbxref=Genbank:WP_011409630.1;Name=WP_011409630.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260578.1;locus_tag=IXO1104_RS02420;product=SpoIIE family protein phosphatase;protein_id=WP_011409630.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 533238 533708 . + . ID=gene-IXO1104_RS02425;Name=IXO1104_RS02425;end_range=533708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02425;old_locus_tag=IXO1104_02400;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 533238 533708 . + 0 ID=cds-IXO1104_RS02425;Parent=gene-IXO1104_RS02425;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=533708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155889.1;locus_tag=IXO1104_RS02425;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 533785 534543 . + . ID=gene-IXO1104_RS02430;Name=IXO1104_RS02430;end_range=534543,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02430;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 533785 534543 . + 0 ID=cds-IXO1104_RS02430;Parent=gene-IXO1104_RS02430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=534543,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_085938460.1;locus_tag=IXO1104_RS02430;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 cmsearch sequence_feature 534052 534168 . + . ID=id-IXO1104_RS02430;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02430;pseudo=true NZ_CP047492.1 RefSeq pseudogene 534565 535941 . - . ID=gene-IXO1104_RS02435;Name=IXO1104_RS02435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02435;old_locus_tag=IXO1104_02410;pseudo=true NZ_CP047492.1 Protein Homology CDS 534565 535941 . - 0 ID=cds-IXO1104_RS02435;Parent=gene-IXO1104_RS02435;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS02435;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 536295 540221 . - . ID=gene-IXO1104_RS02440;Name=IXO1104_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02440;old_locus_tag=IXO1104_02415 NZ_CP047492.1 Protein Homology CDS 536295 540221 . - 0 ID=cds-WP_263117802.1;Parent=gene-IXO1104_RS02440;Dbxref=Genbank:WP_263117802.1;Name=WP_263117802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS02440;product=avirulence protein;protein_id=WP_263117802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 540488 541638 . + . ID=gene-IXO1104_RS02445;Name=IXO1104_RS02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02445;old_locus_tag=IXO1104_02420;partial=true;pseudo=true;start_range=.,540488 NZ_CP047492.1 Protein Homology CDS 540488 541638 . + 0 ID=cds-IXO1104_RS02445;Parent=gene-IXO1104_RS02445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158927.1;locus_tag=IXO1104_RS02445;partial=true;product=lipase;pseudo=true;start_range=.,540488;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 542061 543059 . + . ID=gene-IXO1104_RS02450;Name=IXO1104_RS02450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02450;old_locus_tag=IXO1104_02425;pseudo=true NZ_CP047492.1 Protein Homology CDS 542061 543059 . + 0 ID=cds-IXO1104_RS02450;Parent=gene-IXO1104_RS02450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962641.1;locus_tag=IXO1104_RS02450;product=arabinogalactan endo-1%2C4-beta-galactosidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 543543 546230 . + . ID=gene-IXO1104_RS02455;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=IXO1104_RS02455;old_locus_tag=IXO1104_02430 NZ_CP047492.1 Protein Homology CDS 543543 546230 . + 0 ID=cds-WP_011409622.1;Parent=gene-IXO1104_RS02455;Dbxref=Genbank:WP_011409622.1;Name=WP_011409622.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1;locus_tag=IXO1104_RS02455;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_011409622.1;transl_table=11 NZ_CP047492.1 RefSeq gene 546420 547325 . + . ID=gene-IXO1104_RS02460;Name=IXO1104_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02460;old_locus_tag=IXO1104_02435 NZ_CP047492.1 GeneMarkS-2+ CDS 546420 547325 . + 0 ID=cds-WP_125168769.1;Parent=gene-IXO1104_RS02460;Dbxref=Genbank:WP_125168769.1;Name=WP_125168769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS02460;product=hypothetical protein;protein_id=WP_125168769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 547385 548056 . + . ID=gene-IXO1104_RS02465;Name=IXO1104_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02465;old_locus_tag=IXO1104_02440 NZ_CP047492.1 GeneMarkS-2+ CDS 547385 548056 . + 0 ID=cds-WP_125168768.1;Parent=gene-IXO1104_RS02465;Dbxref=Genbank:WP_125168768.1;Name=WP_125168768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS02465;product=HIRAN domain-containing protein;protein_id=WP_125168768.1;transl_table=11 NZ_CP047492.1 RefSeq gene 548222 549264 . + . ID=gene-IXO1104_RS02470;Name=IXO1104_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02470;old_locus_tag=IXO1104_02445 NZ_CP047492.1 Protein Homology CDS 548222 548417 . + 0 ID=cds-WP_230455400.1;Parent=gene-IXO1104_RS02470;Dbxref=Genbank:WP_230455400.1;Name=WP_230455400.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02470;product=IS3 family transposase;protein_id=WP_230455400.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 548417 549264 . + 2 ID=cds-WP_230455400.1;Parent=gene-IXO1104_RS02470;Dbxref=Genbank:WP_230455400.1;Name=WP_230455400.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02470;product=IS3 family transposase;protein_id=WP_230455400.1;transl_table=11 NZ_CP047492.1 RefSeq gene 549622 549912 . - . ID=gene-IXO1104_RS02475;Name=IXO1104_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02475;old_locus_tag=IXO1104_02450 NZ_CP047492.1 Protein Homology CDS 549622 549912 . - 0 ID=cds-WP_011409617.1;Parent=gene-IXO1104_RS02475;Dbxref=Genbank:WP_011409617.1;Name=WP_011409617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914773.1;locus_tag=IXO1104_RS02475;product=DUF2782 domain-containing protein;protein_id=WP_011409617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 549989 552790 . + . ID=gene-IXO1104_RS02480;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=IXO1104_RS02480;old_locus_tag=IXO1104_02455 NZ_CP047492.1 Protein Homology CDS 549989 552790 . + 0 ID=cds-WP_012443905.1;Parent=gene-IXO1104_RS02480;Dbxref=Genbank:WP_012443905.1;Name=WP_012443905.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159421.1;locus_tag=IXO1104_RS02480;product=DNA polymerase I;protein_id=WP_012443905.1;transl_table=11 NZ_CP047492.1 RefSeq gene 552870 553826 . - . ID=gene-IXO1104_RS02485;Name=IXO1104_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02485;old_locus_tag=IXO1104_02460 NZ_CP047492.1 Protein Homology CDS 552870 553826 . - 0 ID=cds-WP_011407237.1;Parent=gene-IXO1104_RS02485;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS02485;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 554796 555695 . - . ID=gene-IXO1104_RS02490;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=IXO1104_RS02490;old_locus_tag=IXO1104_02465 NZ_CP047492.1 Protein Homology CDS 554796 555695 . - 0 ID=cds-WP_011260560.1;Parent=gene-IXO1104_RS02490;Dbxref=Genbank:WP_011260560.1;Name=WP_011260560.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967076.1;locus_tag=IXO1104_RS02490;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_011260560.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 556038 556745 . + . ID=gene-IXO1104_RS02495;Name=IXO1104_RS02495;end_range=556745,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02495;old_locus_tag=IXO1104_02470;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 556038 556745 . + 0 ID=cds-IXO1104_RS02495;Parent=gene-IXO1104_RS02495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=556745,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260016.1;locus_tag=IXO1104_RS02495;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 556810 557787 . + . ID=gene-IXO1104_RS02500;Name=IXO1104_RS02500;end_range=557787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02500;old_locus_tag=IXO1104_02475;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 556810 557787 . + 0 ID=cds-IXO1104_RS02500;Parent=gene-IXO1104_RS02500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=557787,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS02500;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 558407 558583 . + . ID=gene-IXO1104_RS02505;Name=IXO1104_RS02505;end_range=558583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02505;old_locus_tag=IXO1104_02485;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 558407 558583 . + 0 ID=cds-IXO1104_RS02505;Parent=gene-IXO1104_RS02505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074,GO:0003677;end_range=558583,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994023.1;locus_tag=IXO1104_RS02505;partial=true;product=phage integrase N-terminal SAM-like domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 558611 559987 . - . ID=gene-IXO1104_RS02510;Name=IXO1104_RS02510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02510;old_locus_tag=IXO1104_02490;pseudo=true NZ_CP047492.1 Protein Homology CDS 558611 559987 . - 0 ID=cds-IXO1104_RS02510;Parent=gene-IXO1104_RS02510;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS02510;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 560071 560946 . + . ID=gene-IXO1104_RS02515;Name=IXO1104_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02515;old_locus_tag=IXO1104_02495 NZ_CP047492.1 Protein Homology CDS 560071 560946 . + 0 ID=cds-WP_011260557.1;Parent=gene-IXO1104_RS02515;Dbxref=Genbank:WP_011260557.1;Name=WP_011260557.1;Ontology_term=GO:0006310,GO:0009294,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA,DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300598.1;locus_tag=IXO1104_RS02515;product=integron integrase;protein_id=WP_011260557.1;transl_table=11 NZ_CP047492.1 RefSeq gene 561177 563015 . - . ID=gene-IXO1104_RS02520;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=IXO1104_RS02520;old_locus_tag=IXO1104_02500 NZ_CP047492.1 Protein Homology CDS 561177 563015 . - 0 ID=cds-WP_011260556.1;Parent=gene-IXO1104_RS02520;Dbxref=Genbank:WP_011260556.1;Name=WP_011260556.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437115.1;locus_tag=IXO1104_RS02520;product=dihydroxy-acid dehydratase;protein_id=WP_011260556.1;transl_table=11 NZ_CP047492.1 RefSeq gene 563190 563456 . + . ID=gene-IXO1104_RS02525;Name=IXO1104_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02525;old_locus_tag=IXO1104_02505 NZ_CP047492.1 Protein Homology CDS 563190 563456 . + 0 ID=cds-WP_011409612.1;Parent=gene-IXO1104_RS02525;Dbxref=Genbank:WP_011409612.1;Name=WP_011409612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035600.1;locus_tag=IXO1104_RS02525;product=proteinase inhibitor;protein_id=WP_011409612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 563482 564027 . - . ID=gene-IXO1104_RS02530;Name=IXO1104_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02530;old_locus_tag=IXO1104_02510 NZ_CP047492.1 Protein Homology CDS 563482 564027 . - 0 ID=cds-WP_011409611.1;Parent=gene-IXO1104_RS02530;Dbxref=Genbank:WP_011409611.1;Name=WP_011409611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304318.1;locus_tag=IXO1104_RS02530;product=gamma carbonic anhydrase family protein;protein_id=WP_011409611.1;transl_table=11 NZ_CP047492.1 RefSeq gene 564499 565806 . + . ID=gene-IXO1104_RS02535;Name=IXO1104_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02535;old_locus_tag=IXO1104_02515 NZ_CP047492.1 Protein Homology CDS 564499 565806 . + 0 ID=cds-WP_012443910.1;Parent=gene-IXO1104_RS02535;Dbxref=Genbank:WP_012443910.1;Name=WP_012443910.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117476.1;locus_tag=IXO1104_RS02535;product=MFS transporter;protein_id=WP_012443910.1;transl_table=11 NZ_CP047492.1 RefSeq gene 565945 567204 . + . ID=gene-IXO1104_RS02540;Name=IXO1104_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02540;old_locus_tag=IXO1104_02520 NZ_CP047492.1 Protein Homology CDS 565945 567204 . + 0 ID=cds-WP_011409609.1;Parent=gene-IXO1104_RS02540;Dbxref=Genbank:WP_011409609.1;Name=WP_011409609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172339.1;locus_tag=IXO1104_RS02540;product=HD-GYP domain-containing protein;protein_id=WP_011409609.1;transl_table=11 NZ_CP047492.1 RefSeq gene 567633 568166 . + . ID=gene-IXO1104_RS02545;Name=IXO1104_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02545;old_locus_tag=IXO1104_02525 NZ_CP047492.1 Protein Homology CDS 567633 568166 . + 0 ID=cds-WP_027703952.1;Parent=gene-IXO1104_RS02545;Dbxref=Genbank:WP_027703952.1;Name=WP_027703952.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260550.1;locus_tag=IXO1104_RS02545;product=MarR family transcriptional regulator;protein_id=WP_027703952.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 568177 569553 . - . ID=gene-IXO1104_RS02550;Name=IXO1104_RS02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02550;old_locus_tag=IXO1104_02530;pseudo=true NZ_CP047492.1 Protein Homology CDS 568177 569553 . - 0 ID=cds-IXO1104_RS02550;Parent=gene-IXO1104_RS02550;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS02550;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 569788 569946 . - . ID=gene-IXO1104_RS02555;Name=IXO1104_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02555;old_locus_tag=IXO1104_02535 NZ_CP047492.1 Protein Homology CDS 569788 569946 . - 0 ID=cds-WP_011260548.1;Parent=gene-IXO1104_RS02555;Dbxref=Genbank:WP_011260548.1;Name=WP_011260548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260548.1;locus_tag=IXO1104_RS02555;product=DUF1328 domain-containing protein;protein_id=WP_011260548.1;transl_table=11 NZ_CP047492.1 RefSeq gene 570011 571021 . - . ID=gene-IXO1104_RS02560;Name=IXO1104_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02560;old_locus_tag=IXO1104_02540 NZ_CP047492.1 Protein Homology CDS 570011 571021 . - 0 ID=cds-WP_012443914.1;Parent=gene-IXO1104_RS02560;Dbxref=Genbank:WP_012443914.1;Name=WP_012443914.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572201.1;locus_tag=IXO1104_RS02560;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012443914.1;transl_table=11 NZ_CP047492.1 RefSeq gene 571250 572920 . - . ID=gene-IXO1104_RS02565;Name=IXO1104_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02565;old_locus_tag=IXO1104_02545 NZ_CP047492.1 Protein Homology CDS 571250 572920 . - 0 ID=cds-WP_075240670.1;Parent=gene-IXO1104_RS02565;Dbxref=Genbank:WP_075240670.1;Name=WP_075240670.1;Ontology_term=GO:0006631,GO:0031956;gbkey=CDS;go_function=medium-chain fatty acid-CoA ligase activity|0031956||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462752.1;locus_tag=IXO1104_RS02565;product=fatty acid CoA ligase family protein;protein_id=WP_075240670.1;transl_table=11 NZ_CP047492.1 RefSeq gene 573239 573622 . + . ID=gene-IXO1104_RS02570;Name=IXO1104_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02570;old_locus_tag=IXO1104_02550 NZ_CP047492.1 Protein Homology CDS 573239 573622 . + 0 ID=cds-WP_011409606.1;Parent=gene-IXO1104_RS02570;Dbxref=Genbank:WP_011409606.1;Name=WP_011409606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849671.1;locus_tag=IXO1104_RS02570;product=YkgJ family cysteine cluster protein;protein_id=WP_011409606.1;transl_table=11 NZ_CP047492.1 RefSeq gene 573844 574746 . - . ID=gene-IXO1104_RS02575;Name=IXO1104_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02575;old_locus_tag=IXO1104_02555 NZ_CP047492.1 Protein Homology CDS 573844 574746 . - 0 ID=cds-WP_011260544.1;Parent=gene-IXO1104_RS02575;Dbxref=Genbank:WP_011260544.1;Name=WP_011260544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849672.1;locus_tag=IXO1104_RS02575;product=alpha/beta fold hydrolase;protein_id=WP_011260544.1;transl_table=11 NZ_CP047492.1 RefSeq gene 574743 577238 . - . ID=gene-IXO1104_RS02580;Name=IXO1104_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02580;old_locus_tag=IXO1104_02560 NZ_CP047492.1 Protein Homology CDS 574743 577238 . - 0 ID=cds-WP_080256617.1;Parent=gene-IXO1104_RS02580;Dbxref=Genbank:WP_080256617.1;Name=WP_080256617.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409605.1;locus_tag=IXO1104_RS02580;product=DEAD/DEAH box helicase family protein;protein_id=WP_080256617.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 577246 578092 . - . ID=gene-IXO1104_RS02585;Name=IXO1104_RS02585;end_range=578092,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02585;old_locus_tag=IXO1104_02565;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 577246 578092 . - 0 ID=cds-IXO1104_RS02585;Parent=gene-IXO1104_RS02585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=578092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379854.1;locus_tag=IXO1104_RS02585;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 578020 578982 . - . ID=gene-IXO1104_RS02590;Name=IXO1104_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02590 NZ_CP047492.1 Protein Homology CDS 578020 578982 . - 0 ID=cds-WP_011409560.1-3;Parent=gene-IXO1104_RS02590;Dbxref=Genbank:WP_011409560.1;Name=WP_011409560.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS02590;product=IS1595 family transposase;protein_id=WP_011409560.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 579289 579723 . - . ID=gene-IXO1104_RS02595;Name=IXO1104_RS02595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02595;partial=true;pseudo=true;start_range=.,579289 NZ_CP047492.1 Protein Homology CDS 579289 579723 . - 0 ID=cds-IXO1104_RS02595;Parent=gene-IXO1104_RS02595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=IXO1104_RS02595;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,579289;transl_table=11 NZ_CP047492.1 RefSeq gene 579954 581117 . - . ID=gene-IXO1104_RS02600;Name=IXO1104_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02600;old_locus_tag=IXO1104_02575 NZ_CP047492.1 Protein Homology CDS 579954 581117 . - 0 ID=cds-WP_011260541.1;Parent=gene-IXO1104_RS02600;Dbxref=Genbank:WP_011260541.1;Name=WP_011260541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112724.1;locus_tag=IXO1104_RS02600;product=Fic family protein;protein_id=WP_011260541.1;transl_table=11 NZ_CP047492.1 RefSeq gene 581189 582205 . - . ID=gene-IXO1104_RS02605;Name=IXO1104_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02605;old_locus_tag=IXO1104_02580 NZ_CP047492.1 Protein Homology CDS 581189 582205 . - 0 ID=cds-WP_011260540.1;Parent=gene-IXO1104_RS02605;Dbxref=Genbank:WP_011260540.1;Name=WP_011260540.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=IXO1104_RS02605;product=3-oxoacyl-ACP synthase III;protein_id=WP_011260540.1;transl_table=11 NZ_CP047492.1 RefSeq gene 582307 582627 . - . ID=gene-IXO1104_RS02610;Name=IXO1104_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02610;old_locus_tag=IXO1104_02585 NZ_CP047492.1 Protein Homology CDS 582307 582627 . - 0 ID=cds-WP_010370565.1;Parent=gene-IXO1104_RS02610;Dbxref=Genbank:WP_010370565.1;Name=WP_010370565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=IXO1104_RS02610;product=DUF4156 domain-containing protein;protein_id=WP_010370565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 583013 583474 . + . ID=gene-IXO1104_RS02615;Name=IXO1104_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02615;old_locus_tag=IXO1104_02590 NZ_CP047492.1 Protein Homology CDS 583013 583474 . + 0 ID=cds-WP_011409604.1;Parent=gene-IXO1104_RS02615;Dbxref=Genbank:WP_011409604.1;Name=WP_011409604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912218.1;locus_tag=IXO1104_RS02615;product=hypothetical protein;protein_id=WP_011409604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 583501 583977 . + . ID=gene-IXO1104_RS02620;Name=IXO1104_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02620;old_locus_tag=IXO1104_02595 NZ_CP047492.1 Protein Homology CDS 583501 583977 . + 0 ID=cds-WP_011260538.1;Parent=gene-IXO1104_RS02620;Dbxref=Genbank:WP_011260538.1;Name=WP_011260538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301073.1;locus_tag=IXO1104_RS02620;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_011260538.1;transl_table=11 NZ_CP047492.1 RefSeq gene 584319 585542 . - . ID=gene-IXO1104_RS02625;Name=IXO1104_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02625;old_locus_tag=IXO1104_02600 NZ_CP047492.1 Protein Homology CDS 584319 585542 . - 0 ID=cds-WP_011260537.1;Parent=gene-IXO1104_RS02625;Dbxref=Genbank:WP_011260537.1;Name=WP_011260537.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501531.1;locus_tag=IXO1104_RS02625;product=MFS transporter;protein_id=WP_011260537.1;transl_table=11 NZ_CP047492.1 RefSeq gene 585647 586258 . - . ID=gene-IXO1104_RS02630;Name=IXO1104_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02630;old_locus_tag=IXO1104_02605 NZ_CP047492.1 Protein Homology CDS 585647 586258 . - 0 ID=cds-WP_011260536.1;Parent=gene-IXO1104_RS02630;Dbxref=Genbank:WP_011260536.1;Name=WP_011260536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966364.1;locus_tag=IXO1104_RS02630;product=hypothetical protein;protein_id=WP_011260536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 586360 587103 . - . ID=gene-IXO1104_RS02635;Name=IXO1104_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02635;old_locus_tag=IXO1104_02610 NZ_CP047492.1 Protein Homology CDS 586360 587103 . - 0 ID=cds-WP_012443920.1;Parent=gene-IXO1104_RS02635;Dbxref=Genbank:WP_012443920.1;Name=WP_012443920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501529.1;locus_tag=IXO1104_RS02635;product=hypothetical protein;protein_id=WP_012443920.1;transl_table=11 NZ_CP047492.1 RefSeq gene 587294 588640 . - . ID=gene-IXO1104_RS02640;Name=IXO1104_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02640;old_locus_tag=IXO1104_02615 NZ_CP047492.1 Protein Homology CDS 587294 588640 . - 0 ID=cds-WP_011260534.1;Parent=gene-IXO1104_RS02640;Dbxref=Genbank:WP_011260534.1;Name=WP_011260534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966360.1;locus_tag=IXO1104_RS02640;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011260534.1;transl_table=11 NZ_CP047492.1 RefSeq gene 588625 590067 . - . ID=gene-IXO1104_RS02645;Name=IXO1104_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02645;old_locus_tag=IXO1104_02620 NZ_CP047492.1 Protein Homology CDS 588625 590067 . - 0 ID=cds-WP_011260533.1;Parent=gene-IXO1104_RS02645;Dbxref=Genbank:WP_011260533.1;Name=WP_011260533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156414.1;locus_tag=IXO1104_RS02645;product=HAMP domain-containing histidine kinase;protein_id=WP_011260533.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 590117 591825 . - . ID=gene-IXO1104_RS02650;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=pseudogene;locus_tag=IXO1104_RS02650;old_locus_tag=IXO1104_02625;pseudo=true NZ_CP047492.1 Protein Homology CDS 590117 591825 . - 0 ID=cds-IXO1104_RS02650;Parent=gene-IXO1104_RS02650;Note=frameshifted;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089006.1;locus_tag=IXO1104_RS02650;product=ubiquinone-dependent pyruvate dehydrogenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 592201 592797 . + . ID=gene-IXO1104_RS02655;Name=IXO1104_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02655;old_locus_tag=IXO1104_02630 NZ_CP047492.1 Protein Homology CDS 592201 592797 . + 0 ID=cds-WP_011260531.1;Parent=gene-IXO1104_RS02655;Dbxref=Genbank:WP_011260531.1;Name=WP_011260531.1;Ontology_term=GO:0009372;gbkey=CDS;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451122.1;locus_tag=IXO1104_RS02655;product=Ax21 family protein;protein_id=WP_011260531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 593120 594145 . - . ID=gene-IXO1104_RS02660;Name=IXO1104_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02660;old_locus_tag=IXO1104_02635 NZ_CP047492.1 Protein Homology CDS 593120 594145 . - 0 ID=cds-WP_011409602.1;Parent=gene-IXO1104_RS02660;Dbxref=Genbank:WP_011409602.1;Name=WP_011409602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035460.1;locus_tag=IXO1104_RS02660;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_011409602.1;transl_table=11 NZ_CP047492.1 RefSeq gene 594161 594676 . - . ID=gene-IXO1104_RS02665;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=IXO1104_RS02665;old_locus_tag=IXO1104_02640 NZ_CP047492.1 Protein Homology CDS 594161 594676 . - 0 ID=cds-WP_011260529.1;Parent=gene-IXO1104_RS02665;Dbxref=Genbank:WP_011260529.1;Name=WP_011260529.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501523.1;locus_tag=IXO1104_RS02665;product=protein-export chaperone SecB;protein_id=WP_011260529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 594786 595220 . - . ID=gene-IXO1104_RS02670;Name=IXO1104_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02670;old_locus_tag=IXO1104_02645 NZ_CP047492.1 Protein Homology CDS 594786 595220 . - 0 ID=cds-WP_011260528.1;Parent=gene-IXO1104_RS02670;Dbxref=Genbank:WP_011260528.1;Name=WP_011260528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156410.1;locus_tag=IXO1104_RS02670;product=rhodanese-like domain-containing protein;protein_id=WP_011260528.1;transl_table=11 NZ_CP047492.1 RefSeq gene 595296 595718 . - . ID=gene-IXO1104_RS02675;Name=IXO1104_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02675;old_locus_tag=IXO1104_02650 NZ_CP047492.1 Protein Homology CDS 595296 595718 . - 0 ID=cds-WP_011409601.1;Parent=gene-IXO1104_RS02675;Dbxref=Genbank:WP_011409601.1;Name=WP_011409601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912206.1;locus_tag=IXO1104_RS02675;product=hypothetical protein;protein_id=WP_011409601.1;transl_table=11 NZ_CP047492.1 RefSeq gene 595747 596217 . - . ID=gene-IXO1104_RS02680;Name=IXO1104_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02680;old_locus_tag=IXO1104_02655 NZ_CP047492.1 Protein Homology CDS 595747 596217 . - 0 ID=cds-WP_027703675.1;Parent=gene-IXO1104_RS02680;Dbxref=Genbank:WP_027703675.1;Name=WP_027703675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156408.1;locus_tag=IXO1104_RS02680;product=YiiD C-terminal domain-containing protein;protein_id=WP_027703675.1;transl_table=11 NZ_CP047492.1 RefSeq gene 596680 597645 . + . ID=gene-IXO1104_RS02685;Name=IXO1104_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02685;old_locus_tag=IXO1104_02660 NZ_CP047492.1 Protein Homology CDS 596680 597645 . + 0 ID=cds-WP_109181928.1;Parent=gene-IXO1104_RS02685;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS02685;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 597650 598060 . + . ID=gene-IXO1104_RS02690;Name=IXO1104_RS02690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02690;old_locus_tag=IXO1104_02665;partial=true;pseudo=true;start_range=.,597650 NZ_CP047492.1 Protein Homology CDS 597650 598060 . + 0 ID=cds-IXO1104_RS02690;Parent=gene-IXO1104_RS02690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS02690;partial=true;product=IS5-like element ISXo3 family transposase;pseudo=true;start_range=.,597650;transl_table=11 NZ_CP047492.1 RefSeq gene 598389 599756 . + . ID=gene-IXO1104_RS02695;Name=IXO1104_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02695;old_locus_tag=IXO1104_02675 NZ_CP047492.1 Protein Homology CDS 598389 599756 . + 0 ID=cds-WP_027703859.1;Parent=gene-IXO1104_RS02695;Dbxref=Genbank:WP_027703859.1;Name=WP_027703859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973536.1;locus_tag=IXO1104_RS02695;product=VOC family protein;protein_id=WP_027703859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 600046 603186 . - . ID=gene-IXO1104_RS02700;Name=IXO1104_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02700;old_locus_tag=IXO1104_02685 NZ_CP047492.1 Protein Homology CDS 600046 603186 . - 0 ID=cds-WP_011409597.1;Parent=gene-IXO1104_RS02700;Dbxref=Genbank:WP_011409597.1;Name=WP_011409597.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171705.1;locus_tag=IXO1104_RS02700;product=efflux RND transporter permease subunit;protein_id=WP_011409597.1;transl_table=11 NZ_CP047492.1 RefSeq gene 603320 606568 . - . ID=gene-IXO1104_RS02705;Name=IXO1104_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02705;old_locus_tag=IXO1104_02690 NZ_CP047492.1 Protein Homology CDS 603320 606568 . - 0 ID=cds-WP_011260521.1;Parent=gene-IXO1104_RS02705;Dbxref=Genbank:WP_011260521.1;Name=WP_011260521.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238036.1;locus_tag=IXO1104_RS02705;product=efflux RND transporter permease subunit;protein_id=WP_011260521.1;transl_table=11 NZ_CP047492.1 RefSeq gene 606661 607905 . - . ID=gene-IXO1104_RS02710;Name=IXO1104_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02710;old_locus_tag=IXO1104_02695 NZ_CP047492.1 Protein Homology CDS 606661 607905 . - 0 ID=cds-WP_012443931.1;Parent=gene-IXO1104_RS02710;Dbxref=Genbank:WP_012443931.1;Name=WP_012443931.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=IXO1104_RS02710;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012443931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 608165 609481 . + . ID=gene-IXO1104_RS02715;Name=IXO1104_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02715;old_locus_tag=IXO1104_02700 NZ_CP047492.1 Protein Homology CDS 608165 609481 . + 0 ID=cds-WP_011409596.1;Parent=gene-IXO1104_RS02715;Dbxref=Genbank:WP_011409596.1;Name=WP_011409596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304562.1;locus_tag=IXO1104_RS02715;product=M20 family metallopeptidase;protein_id=WP_011409596.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 609488 610147 . - . ID=gene-IXO1104_RS02720;Name=IXO1104_RS02720;end_range=610147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02720;old_locus_tag=IXO1104_02705;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 609488 610147 . - 0 ID=cds-IXO1104_RS02720;Parent=gene-IXO1104_RS02720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=610147,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1104_RS02720;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 610240 611055 . + . ID=gene-IXO1104_RS02725;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=IXO1104_RS02725;old_locus_tag=IXO1104_02710 NZ_CP047492.1 Protein Homology CDS 610240 611055 . + 0 ID=cds-WP_011260517.1;Parent=gene-IXO1104_RS02725;Dbxref=Genbank:WP_011260517.1;Name=WP_011260517.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1;locus_tag=IXO1104_RS02725;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_011260517.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 611159 611469 . + . ID=gene-IXO1104_RS02730;Name=IXO1104_RS02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02730;pseudo=true NZ_CP047492.1 Protein Homology CDS 611159 611469 . + 0 ID=cds-IXO1104_RS02730;Parent=gene-IXO1104_RS02730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923039.1;locus_tag=IXO1104_RS02730;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 611523 612707 . + . ID=gene-IXO1104_RS02735;Name=IXO1104_RS02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02735;old_locus_tag=IXO1104_02715;pseudo=true NZ_CP047492.1 Protein Homology CDS 611523 612707 . + 0 ID=cds-IXO1104_RS02735;Parent=gene-IXO1104_RS02735;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS02735;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 613083 613889 . + . ID=gene-IXO1104_RS02740;Name=IXO1104_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02740;old_locus_tag=IXO1104_02725 NZ_CP047492.1 Protein Homology CDS 613083 613889 . + 0 ID=cds-WP_075240727.1;Parent=gene-IXO1104_RS02740;Dbxref=Genbank:WP_075240727.1;Name=WP_075240727.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1104_RS02740;product=IS5 family transposase;protein_id=WP_075240727.1;transl_table=11 NZ_CP047492.1 RefSeq gene 614421 618911 . - . ID=gene-IXO1104_RS02745;Name=IXO1104_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02745;old_locus_tag=IXO1104_02730 NZ_CP047492.1 Protein Homology CDS 614421 618911 . - 0 ID=cds-WP_263117808.1;Parent=gene-IXO1104_RS02745;Dbxref=Genbank:WP_263117808.1;Name=WP_263117808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258350.1;locus_tag=IXO1104_RS02745;product=type IV secretion protein Rhs;protein_id=WP_263117808.1;transl_table=11 NZ_CP047492.1 RefSeq gene 619036 620071 . - . ID=gene-IXO1104_RS02750;Name=IXO1104_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02750;old_locus_tag=IXO1104_02735 NZ_CP047492.1 Protein Homology CDS 619241 620071 . - 0 ID=cds-WP_241846853.1;Parent=gene-IXO1104_RS02750;Dbxref=Genbank:WP_241846853.1;Name=WP_241846853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS02750;product=IS5 family transposase;protein_id=WP_241846853.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 619036 619239 . - 0 ID=cds-WP_241846853.1;Parent=gene-IXO1104_RS02750;Dbxref=Genbank:WP_241846853.1;Name=WP_241846853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS02750;product=IS5 family transposase;protein_id=WP_241846853.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 620146 620313 . + . ID=gene-IXO1104_RS02755;Name=IXO1104_RS02755;end_range=620313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02755;old_locus_tag=IXO1104_02740;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 620146 620313 . + 0 ID=cds-IXO1104_RS02755;Parent=gene-IXO1104_RS02755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=620313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS02755;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 620431 621645 . + . ID=gene-IXO1104_RS02760;Name=IXO1104_RS02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02760;old_locus_tag=IXO1104_02745;pseudo=true NZ_CP047492.1 Protein Homology CDS 620431 621645 . + 0 ID=cds-IXO1104_RS02760;Parent=gene-IXO1104_RS02760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS02760;product=IS4-like element ISXo14 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 621828 621974 . + . ID=gene-IXO1104_RS02765;Name=IXO1104_RS02765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02765;old_locus_tag=IXO1104_02750;partial=true;pseudo=true;start_range=.,621828 NZ_CP047492.1 Protein Homology CDS 621828 621974 . + 0 ID=cds-IXO1104_RS02765;Parent=gene-IXO1104_RS02765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS02765;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,621828;transl_table=11 NZ_CP047492.1 RefSeq gene 622004 623380 . - . ID=gene-IXO1104_RS02770;Name=IXO1104_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02770;old_locus_tag=IXO1104_02755 NZ_CP047492.1 Protein Homology CDS 622004 623380 . - 0 ID=cds-WP_069965005.1;Parent=gene-IXO1104_RS02770;Dbxref=Genbank:WP_069965005.1;Name=WP_069965005.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS02770;product=IS5 family transposase;protein_id=WP_069965005.1;transl_table=11 NZ_CP047492.1 RefSeq gene 623529 625133 . - . ID=gene-IXO1104_RS02775;Name=IXO1104_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02775;old_locus_tag=IXO1104_02760 NZ_CP047492.1 Protein Homology CDS 623529 625133 . - 0 ID=cds-WP_229002680.1;Parent=gene-IXO1104_RS02775;Dbxref=Genbank:WP_229002680.1;Name=WP_229002680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300075.1;locus_tag=IXO1104_RS02775;product=hypothetical protein;protein_id=WP_229002680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 625431 627662 . + . ID=gene-IXO1104_RS02780;Name=IXO1104_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02780;old_locus_tag=IXO1104_02765 NZ_CP047492.1 Protein Homology CDS 625431 627662 . + 0 ID=cds-WP_027704001.1;Parent=gene-IXO1104_RS02780;Dbxref=Genbank:WP_027704001.1;Name=WP_027704001.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157024.1;locus_tag=IXO1104_RS02780;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_027704001.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 627736 627968 . - . ID=gene-IXO1104_RS02785;Name=IXO1104_RS02785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02785;pseudo=true NZ_CP047492.1 Protein Homology CDS 627736 627968 . - 0 ID=cds-IXO1104_RS02785;Parent=gene-IXO1104_RS02785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300073.1;locus_tag=IXO1104_RS02785;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 627994 628218 . + . ID=gene-IXO1104_RS02790;Name=IXO1104_RS02790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02790;old_locus_tag=IXO1104_02770;partial=true;pseudo=true;start_range=.,627994 NZ_CP047492.1 Protein Homology CDS 627994 628218 . + 0 ID=cds-IXO1104_RS02790;Parent=gene-IXO1104_RS02790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167547.1;locus_tag=IXO1104_RS02790;partial=true;product=biotin transporter BioY;pseudo=true;start_range=.,627994;transl_table=11 NZ_CP047492.1 RefSeq gene 628266 629308 . - . ID=gene-IXO1104_RS02795;Name=IXO1104_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02795;old_locus_tag=IXO1104_02775 NZ_CP047492.1 Protein Homology CDS 629113 629308 . - 0 ID=cds-WP_241846849.1;Parent=gene-IXO1104_RS02795;Dbxref=Genbank:WP_241846849.1;Name=WP_241846849.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02795;product=IS3 family transposase;protein_id=WP_241846849.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 628266 629113 . - 2 ID=cds-WP_241846849.1;Parent=gene-IXO1104_RS02795;Dbxref=Genbank:WP_241846849.1;Name=WP_241846849.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02795;product=IS3 family transposase;protein_id=WP_241846849.1;transl_table=11 NZ_CP047492.1 RefSeq gene 629417 630091 . - . ID=gene-IXO1104_RS02800;Name=IXO1104_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02800;old_locus_tag=IXO1104_02780 NZ_CP047492.1 Protein Homology CDS 629417 630091 . - 0 ID=cds-WP_075240081.1;Parent=gene-IXO1104_RS02800;Dbxref=Genbank:WP_075240081.1;Name=WP_075240081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409582.1;locus_tag=IXO1104_RS02800;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_075240081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 630797 631378 . + . ID=gene-IXO1104_RS02805;Name=IXO1104_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02805;old_locus_tag=IXO1104_02785 NZ_CP047492.1 Protein Homology CDS 630797 631378 . + 0 ID=cds-WP_011409581.1;Parent=gene-IXO1104_RS02805;Dbxref=Genbank:WP_011409581.1;Name=WP_011409581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802968.1;locus_tag=IXO1104_RS02805;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_011409581.1;transl_table=11 NZ_CP047492.1 RefSeq gene 631531 632160 . + . ID=gene-IXO1104_RS02810;Name=IXO1104_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02810;old_locus_tag=IXO1104_02790 NZ_CP047492.1 Protein Homology CDS 631531 632160 . + 0 ID=cds-WP_011260499.1;Parent=gene-IXO1104_RS02810;Dbxref=Genbank:WP_011260499.1;Name=WP_011260499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260499.1;locus_tag=IXO1104_RS02810;product=flavin reductase family protein;protein_id=WP_011260499.1;transl_table=11 NZ_CP047492.1 RefSeq gene 632278 633315 . + . ID=gene-IXO1104_RS02815;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=IXO1104_RS02815;old_locus_tag=IXO1104_02795 NZ_CP047492.1 Protein Homology CDS 632278 633315 . + 0 ID=cds-WP_011409580.1;Parent=gene-IXO1104_RS02815;Dbxref=Genbank:WP_011409580.1;Name=WP_011409580.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157930.1;locus_tag=IXO1104_RS02815;product=anthranilate phosphoribosyltransferase;protein_id=WP_011409580.1;transl_table=11 NZ_CP047492.1 RefSeq gene 633377 634249 . + . ID=gene-IXO1104_RS02820;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=IXO1104_RS02820;old_locus_tag=IXO1104_02800 NZ_CP047492.1 Protein Homology CDS 633377 634249 . + 0 ID=cds-WP_027703892.1;Parent=gene-IXO1104_RS02820;Dbxref=Genbank:WP_027703892.1;Name=WP_027703892.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303763.1;locus_tag=IXO1104_RS02820;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_027703892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 634242 634958 . + . ID=gene-IXO1104_RS02825;Name=IXO1104_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02825;old_locus_tag=IXO1104_02805 NZ_CP047492.1 Protein Homology CDS 634242 634958 . + 0 ID=cds-WP_011409579.1;Parent=gene-IXO1104_RS02825;Dbxref=Genbank:WP_011409579.1;Name=WP_011409579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808250.1;locus_tag=IXO1104_RS02825;product=haloacid dehalogenase-like hydrolase;protein_id=WP_011409579.1;transl_table=11 NZ_CP047492.1 RefSeq gene 635279 635971 . - . ID=gene-IXO1104_RS02830;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=IXO1104_RS02830;old_locus_tag=IXO1104_02810 NZ_CP047492.1 Protein Homology CDS 635279 635971 . - 0 ID=cds-WP_011260495.1;Parent=gene-IXO1104_RS02830;Dbxref=Genbank:WP_011260495.1;Name=WP_011260495.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1;locus_tag=IXO1104_RS02830;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_011260495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 636109 636903 . + . ID=gene-IXO1104_RS02835;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=IXO1104_RS02835;old_locus_tag=IXO1104_02815 NZ_CP047492.1 Protein Homology CDS 636109 636903 . + 0 ID=cds-WP_011260494.1;Parent=gene-IXO1104_RS02835;Dbxref=Genbank:WP_011260494.1;Name=WP_011260494.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1;locus_tag=IXO1104_RS02835;product=adenosylmethionine decarboxylase;protein_id=WP_011260494.1;transl_table=11 NZ_CP047492.1 RefSeq gene 637063 637377 . + . ID=gene-IXO1104_RS02840;Name=IXO1104_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02840;old_locus_tag=IXO1104_02820 NZ_CP047492.1 Protein Homology CDS 637063 637377 . + 0 ID=cds-WP_011409578.1;Parent=gene-IXO1104_RS02840;Dbxref=Genbank:WP_011409578.1;Name=WP_011409578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990694.1;locus_tag=IXO1104_RS02840;product=multidrug efflux SMR transporter;protein_id=WP_011409578.1;transl_table=11 NZ_CP047492.1 RefSeq gene 637660 638313 . - . ID=gene-IXO1104_RS02845;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=IXO1104_RS02845;old_locus_tag=IXO1104_02825 NZ_CP047492.1 Protein Homology CDS 637660 638313 . - 0 ID=cds-WP_011260492.1;Parent=gene-IXO1104_RS02845;Dbxref=Genbank:WP_011260492.1;Name=WP_011260492.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483072.1;locus_tag=IXO1104_RS02845;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_011260492.1;transl_table=11 NZ_CP047492.1 RefSeq gene 638499 638927 . + . ID=gene-IXO1104_RS02850;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=IXO1104_RS02850;old_locus_tag=IXO1104_02830 NZ_CP047492.1 Protein Homology CDS 638499 638927 . + 0 ID=cds-WP_011260491.1;Parent=gene-IXO1104_RS02850;Dbxref=Genbank:WP_011260491.1;Name=WP_011260491.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451009.1;locus_tag=IXO1104_RS02850;product=50S ribosomal protein L13;protein_id=WP_011260491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 638931 639323 . + . ID=gene-IXO1104_RS02855;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=IXO1104_RS02855;old_locus_tag=IXO1104_02835 NZ_CP047492.1 Protein Homology CDS 638931 639323 . + 0 ID=cds-WP_005990700.1;Parent=gene-IXO1104_RS02855;Dbxref=Genbank:WP_005990700.1;Name=WP_005990700.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=IXO1104_RS02855;product=30S ribosomal protein S9;protein_id=WP_005990700.1;transl_table=11 NZ_CP047492.1 RefSeq gene 639551 639624 . - . ID=gene-IXO1104_RS02860;Name=IXO1104_RS02860;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS02860;old_locus_tag=IXO1104_02840 NZ_CP047492.1 tRNAscan-SE tRNA 639551 639624 . - . ID=rna-IXO1104_RS02860;Parent=gene-IXO1104_RS02860;anticodon=(pos:complement(639590..639592));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS02860;product=tRNA-Gln NZ_CP047492.1 tRNAscan-SE exon 639551 639624 . - . ID=exon-IXO1104_RS02860-1;Parent=rna-IXO1104_RS02860;anticodon=(pos:complement(639590..639592));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS02860;product=tRNA-Gln NZ_CP047492.1 RefSeq gene 639677 639753 . - . ID=gene-IXO1104_RS02865;Name=IXO1104_RS02865;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS02865;old_locus_tag=IXO1104_02845 NZ_CP047492.1 tRNAscan-SE tRNA 639677 639753 . - . ID=rna-IXO1104_RS02865;Parent=gene-IXO1104_RS02865;anticodon=(pos:complement(639717..639719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS02865;product=tRNA-Met NZ_CP047492.1 tRNAscan-SE exon 639677 639753 . - . ID=exon-IXO1104_RS02865-1;Parent=rna-IXO1104_RS02865;anticodon=(pos:complement(639717..639719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS02865;product=tRNA-Met NZ_CP047492.1 RefSeq gene 639872 640489 . + . ID=gene-IXO1104_RS02870;Name=IXO1104_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02870;old_locus_tag=IXO1104_02850 NZ_CP047492.1 Protein Homology CDS 639872 640489 . + 0 ID=cds-WP_011260490.1;Parent=gene-IXO1104_RS02870;Dbxref=Genbank:WP_011260490.1;Name=WP_011260490.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167453.1;locus_tag=IXO1104_RS02870;product=RNA pyrophosphohydrolase;protein_id=WP_011260490.1;transl_table=11 NZ_CP047492.1 RefSeq gene 640570 640785 . + . ID=gene-IXO1104_RS02875;Name=IXO1104_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02875;old_locus_tag=IXO1104_02855 NZ_CP047492.1 Protein Homology CDS 640570 640785 . + 0 ID=cds-WP_027703893.1;Parent=gene-IXO1104_RS02875;Dbxref=Genbank:WP_027703893.1;Name=WP_027703893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411309.1;locus_tag=IXO1104_RS02875;product=(2Fe-2S)-binding protein;protein_id=WP_027703893.1;transl_table=11 NZ_CP047492.1 RefSeq gene 641128 641598 . + . ID=gene-IXO1104_RS02880;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=IXO1104_RS02880;old_locus_tag=IXO1104_02860 NZ_CP047492.1 Protein Homology CDS 641128 641598 . + 0 ID=cds-WP_003483093.1;Parent=gene-IXO1104_RS02880;Dbxref=Genbank:WP_003483093.1;Name=WP_003483093.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1;locus_tag=IXO1104_RS02880;product=bacterioferritin;protein_id=WP_003483093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 641611 642576 . - . ID=gene-IXO1104_RS02885;Name=IXO1104_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02885;old_locus_tag=IXO1104_02865 NZ_CP047492.1 Protein Homology CDS 641611 642576 . - 0 ID=cds-WP_109182013.1;Parent=gene-IXO1104_RS02885;Dbxref=Genbank:WP_109182013.1;Name=WP_109182013.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS02885;product=IS1595 family transposase;protein_id=WP_109182013.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 642667 643634 . - . ID=gene-IXO1104_RS02890;Name=IXO1104_RS02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02890;old_locus_tag=IXO1104_02870;partial=true;pseudo=true;start_range=.,642667 NZ_CP047492.1 Protein Homology CDS 642667 643634 . - 0 ID=cds-IXO1104_RS02890;Parent=gene-IXO1104_RS02890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS02890;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,642667;transl_table=11 NZ_CP047492.1 RefSeq gene 643794 646994 . - . ID=gene-IXO1104_RS02895;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=IXO1104_RS02895;old_locus_tag=IXO1104_02875 NZ_CP047492.1 Protein Homology CDS 643794 646994 . - 0 ID=cds-WP_011260487.1;Parent=gene-IXO1104_RS02895;Dbxref=Genbank:WP_011260487.1;Name=WP_011260487.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301724.1;locus_tag=IXO1104_RS02895;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_011260487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 647271 647747 . + . ID=gene-IXO1104_RS02900;Name=IXO1104_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02900;old_locus_tag=IXO1104_02880 NZ_CP047492.1 Protein Homology CDS 647271 647747 . + 0 ID=cds-WP_011409574.1;Parent=gene-IXO1104_RS02900;Dbxref=Genbank:WP_011409574.1;Name=WP_011409574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484655.1;locus_tag=IXO1104_RS02900;product=DUF2244 domain-containing protein;protein_id=WP_011409574.1;transl_table=11 NZ_CP047492.1 RefSeq gene 647764 648717 . + . ID=gene-IXO1104_RS02905;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=IXO1104_RS02905;old_locus_tag=IXO1104_02885 NZ_CP047492.1 Protein Homology CDS 647764 648717 . + 0 ID=cds-WP_011260485.1;Parent=gene-IXO1104_RS02905;Dbxref=Genbank:WP_011260485.1;Name=WP_011260485.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157718.1;locus_tag=IXO1104_RS02905;product=cytochrome c oxidase subunit II;protein_id=WP_011260485.1;transl_table=11 NZ_CP047492.1 RefSeq gene 648756 650360 . + . ID=gene-IXO1104_RS02910;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS02910;old_locus_tag=IXO1104_02890 NZ_CP047492.1 Protein Homology CDS 648756 650360 . + 0 ID=cds-WP_011260484.1;Parent=gene-IXO1104_RS02910;Dbxref=Genbank:WP_011260484.1;Name=WP_011260484.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501708.1;locus_tag=IXO1104_RS02910;product=cytochrome c oxidase subunit I;protein_id=WP_011260484.1;transl_table=11 NZ_CP047492.1 RefSeq gene 650341 650514 . + . ID=gene-IXO1104_RS02915;Name=IXO1104_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02915;old_locus_tag=IXO1104_02895 NZ_CP047492.1 Protein Homology CDS 650341 650514 . + 0 ID=cds-WP_011409573.1;Parent=gene-IXO1104_RS02915;Dbxref=Genbank:WP_011409573.1;Name=WP_011409573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484652.1;locus_tag=IXO1104_RS02915;product=hypothetical protein;protein_id=WP_011409573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 650511 651107 . + . ID=gene-IXO1104_RS02920;Name=IXO1104_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02920;old_locus_tag=IXO1104_02900 NZ_CP047492.1 Protein Homology CDS 650511 651107 . + 0 ID=cds-WP_012443948.1;Parent=gene-IXO1104_RS02920;Dbxref=Genbank:WP_012443948.1;Name=WP_012443948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163727.1;locus_tag=IXO1104_RS02920;product=cytochrome c oxidase assembly protein;protein_id=WP_012443948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 651146 652021 . + . ID=gene-IXO1104_RS02925;Name=IXO1104_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02925;old_locus_tag=IXO1104_02905 NZ_CP047492.1 Protein Homology CDS 651146 652021 . + 0 ID=cds-WP_011260481.1;Parent=gene-IXO1104_RS02925;Dbxref=Genbank:WP_011260481.1;Name=WP_011260481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501710.1;locus_tag=IXO1104_RS02925;product=cytochrome c oxidase subunit 3;protein_id=WP_011260481.1;transl_table=11 NZ_CP047492.1 RefSeq gene 652121 652339 . - . ID=gene-IXO1104_RS02930;Name=IXO1104_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02930;old_locus_tag=IXO1104_02910 NZ_CP047492.1 Protein Homology CDS 652121 652339 . - 0 ID=cds-WP_012443949.1;Parent=gene-IXO1104_RS02930;Dbxref=Genbank:WP_012443949.1;Name=WP_012443949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157720.1;locus_tag=IXO1104_RS02930;product=twin transmembrane helix small protein;protein_id=WP_012443949.1;transl_table=11 NZ_CP047492.1 RefSeq gene 652400 653119 . + . ID=gene-IXO1104_RS02935;Name=IXO1104_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02935;old_locus_tag=IXO1104_02915 NZ_CP047492.1 Protein Homology CDS 652400 653119 . + 0 ID=cds-WP_012443950.1;Parent=gene-IXO1104_RS02935;Dbxref=Genbank:WP_012443950.1;Name=WP_012443950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172044.1;locus_tag=IXO1104_RS02935;product=SURF1 family protein;protein_id=WP_012443950.1;transl_table=11 NZ_CP047492.1 RefSeq gene 653147 653722 . + . ID=gene-IXO1104_RS02940;Name=IXO1104_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02940;old_locus_tag=IXO1104_02920 NZ_CP047492.1 Protein Homology CDS 653147 653722 . + 0 ID=cds-WP_011260478.1;Parent=gene-IXO1104_RS02940;Dbxref=Genbank:WP_011260478.1;Name=WP_011260478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303937.1;locus_tag=IXO1104_RS02940;product=hypothetical protein;protein_id=WP_011260478.1;transl_table=11 NZ_CP047492.1 RefSeq gene 653733 654896 . + . ID=gene-IXO1104_RS02945;Name=IXO1104_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02945;old_locus_tag=IXO1104_02925 NZ_CP047492.1 Protein Homology CDS 653733 654896 . + 0 ID=cds-WP_011260477.1;Parent=gene-IXO1104_RS02945;Dbxref=Genbank:WP_011260477.1;Name=WP_011260477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1;locus_tag=IXO1104_RS02945;product=COX15/CtaA family protein;protein_id=WP_011260477.1;transl_table=11 NZ_CP047492.1 RefSeq gene 654899 655795 . + . ID=gene-IXO1104_RS02950;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=IXO1104_RS02950;old_locus_tag=IXO1104_02930 NZ_CP047492.1 Protein Homology CDS 654899 655795 . + 0 ID=cds-WP_011409570.1;Parent=gene-IXO1104_RS02950;Dbxref=Genbank:WP_011409570.1;Name=WP_011409570.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966545.1;locus_tag=IXO1104_RS02950;product=heme o synthase;protein_id=WP_011409570.1;transl_table=11 NZ_CP047492.1 RefSeq gene 655987 656063 . + . ID=gene-IXO1104_RS02955;Name=IXO1104_RS02955;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS02955;old_locus_tag=IXO1104_02935 NZ_CP047492.1 cmsearch ncRNA 655987 656063 . + . ID=rna-IXO1104_RS02955;Parent=gene-IXO1104_RS02955;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02955;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 655987 656063 . + . ID=exon-IXO1104_RS02955-1;Parent=rna-IXO1104_RS02955;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS02955;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 656184 657764 . - . ID=gene-IXO1104_RS02960;Name=IXO1104_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02960;old_locus_tag=IXO1104_02940 NZ_CP047492.1 Protein Homology CDS 656184 657764 . - 0 ID=cds-WP_044757138.1;Parent=gene-IXO1104_RS02960;Dbxref=Genbank:WP_044757138.1;Name=WP_044757138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1;locus_tag=IXO1104_RS02960;product=thioredoxin family protein;protein_id=WP_044757138.1;transl_table=11 NZ_CP047492.1 RefSeq gene 657948 658994 . - . ID=gene-IXO1104_RS02965;Name=IXO1104_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02965;old_locus_tag=IXO1104_02945 NZ_CP047492.1 Protein Homology CDS 657948 658994 . - 0 ID=cds-WP_033013369.1;Parent=gene-IXO1104_RS02965;Dbxref=Genbank:WP_033013369.1;Name=WP_033013369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301736.1;locus_tag=IXO1104_RS02965;product=bile acid:sodium symporter;protein_id=WP_033013369.1;transl_table=11 NZ_CP047492.1 RefSeq gene 659219 659485 . + . ID=gene-IXO1104_RS02970;Name=IXO1104_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02970;old_locus_tag=IXO1104_02950 NZ_CP047492.1 GeneMarkS-2+ CDS 659219 659485 . + 0 ID=cds-WP_059317500.1;Parent=gene-IXO1104_RS02970;Dbxref=Genbank:WP_059317500.1;Name=WP_059317500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS02970;product=hypothetical protein;protein_id=WP_059317500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 659485 659649 . + . ID=gene-IXO1104_RS02975;Name=IXO1104_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02975 NZ_CP047492.1 GeneMarkS-2+ CDS 659485 659649 . + 0 ID=cds-WP_012443953.1;Parent=gene-IXO1104_RS02975;Dbxref=Genbank:WP_012443953.1;Name=WP_012443953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS02975;product=hypothetical protein;protein_id=WP_012443953.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 659657 659824 . + . ID=gene-IXO1104_RS02980;Name=IXO1104_RS02980;end_range=659824,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02980;old_locus_tag=IXO1104_02955;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 659657 659824 . + 0 ID=cds-IXO1104_RS02980;Parent=gene-IXO1104_RS02980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=659824,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS02980;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 659942 661156 . + . ID=gene-IXO1104_RS02985;Name=IXO1104_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02985;old_locus_tag=IXO1104_02960 NZ_CP047492.1 Protein Homology CDS 659942 661156 . + 0 ID=cds-WP_133264539.1;Parent=gene-IXO1104_RS02985;Dbxref=Genbank:WP_133264539.1;Name=WP_133264539.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS02985;product=IS4 family transposase;protein_id=WP_133264539.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 661176 662399 . + . ID=gene-IXO1104_RS02990;Name=IXO1104_RS02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS02990;old_locus_tag=IXO1104_02965;partial=true;pseudo=true;start_range=.,661176 NZ_CP047492.1 Protein Homology CDS 661176 662399 . + 0 ID=cds-IXO1104_RS02990;Parent=gene-IXO1104_RS02990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS02990;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,661176;transl_table=11 NZ_CP047492.1 RefSeq gene 662549 663517 . + . ID=gene-IXO1104_RS02995;Name=IXO1104_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS02995;old_locus_tag=IXO1104_02970 NZ_CP047492.1 Protein Homology CDS 662549 663517 . + 0 ID=cds-WP_012443955.1;Parent=gene-IXO1104_RS02995;Dbxref=Genbank:WP_012443955.1;Name=WP_012443955.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS02995;product=IS5 family transposase;protein_id=WP_012443955.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 663858 665176 . - . ID=gene-IXO1104_RS03000;Name=IXO1104_RS03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03000;old_locus_tag=IXO1104_02975;pseudo=true NZ_CP047492.1 Protein Homology CDS 663858 665176 . - 0 ID=cds-IXO1104_RS03000;Parent=gene-IXO1104_RS03000;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03000;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 665258 665722 . + . ID=gene-IXO1104_RS03005;Name=IXO1104_RS03005;end_range=665722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03005;old_locus_tag=IXO1104_02980;partial=true;pseudo=true;start_range=.,665258 NZ_CP047492.1 Protein Homology CDS 665258 665722 . + 0 ID=cds-IXO1104_RS03005;Parent=gene-IXO1104_RS03005;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=665722,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS03005;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,665258;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 665671 665961 . + . ID=gene-IXO1104_RS03010;Name=IXO1104_RS03010;end_range=665961,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03010;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 665671 665961 . + 0 ID=cds-IXO1104_RS03010;Parent=gene-IXO1104_RS03010;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=665961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379736.1;locus_tag=IXO1104_RS03010;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 665898 666227 . - . ID=gene-IXO1104_RS03015;Name=IXO1104_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03015 NZ_CP047492.1 GeneMarkS-2+ CDS 665898 666227 . - 0 ID=cds-WP_027703945.1;Parent=gene-IXO1104_RS03015;Dbxref=Genbank:WP_027703945.1;Name=WP_027703945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS03015;product=hypothetical protein;protein_id=WP_027703945.1;transl_table=11 NZ_CP047492.1 RefSeq gene 666256 667272 . - . ID=gene-IXO1104_RS03020;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03020;old_locus_tag=IXO1104_02990 NZ_CP047492.1 Protein Homology CDS 666256 667272 . - 0 ID=cds-WP_075240100.1;Parent=gene-IXO1104_RS03020;Dbxref=Genbank:WP_075240100.1;Name=WP_075240100.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051953.1;locus_tag=IXO1104_RS03020;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_075240100.1;transl_table=11 NZ_CP047492.1 RefSeq gene 667263 668663 . - . ID=gene-IXO1104_RS03025;Name=IXO1104_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03025;old_locus_tag=IXO1104_02995 NZ_CP047492.1 Protein Homology CDS 667263 668663 . - 0 ID=cds-WP_075240099.1;Parent=gene-IXO1104_RS03025;Dbxref=Genbank:WP_075240099.1;Name=WP_075240099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504776.1;locus_tag=IXO1104_RS03025;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_075240099.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 668974 669254 . - . ID=gene-IXO1104_RS03030;Name=IXO1104_RS03030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03030;old_locus_tag=IXO1104_03000;pseudo=true NZ_CP047492.1 Protein Homology CDS 668974 669254 . - 0 ID=cds-IXO1104_RS03030;Parent=gene-IXO1104_RS03030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157410.1;locus_tag=IXO1104_RS03030;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 669788 671068 . + . ID=gene-IXO1104_RS03035;Name=IXO1104_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03035;old_locus_tag=IXO1104_03005 NZ_CP047492.1 Protein Homology CDS 669788 671068 . + 0 ID=cds-WP_012446194.1;Parent=gene-IXO1104_RS03035;Dbxref=Genbank:WP_012446194.1;Name=WP_012446194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117241.1;locus_tag=IXO1104_RS03035;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012446194.1;transl_table=11 NZ_CP047492.1 RefSeq gene 671068 671334 . + . ID=gene-IXO1104_RS03040;Name=IXO1104_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03040;old_locus_tag=IXO1104_03010 NZ_CP047492.1 Protein Homology CDS 671068 671334 . + 0 ID=cds-WP_011257545.1;Parent=gene-IXO1104_RS03040;Dbxref=Genbank:WP_011257545.1;Name=WP_011257545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257545.1;locus_tag=IXO1104_RS03040;product=hypothetical protein;protein_id=WP_011257545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 671303 671683 . - . ID=gene-IXO1104_RS03045;Name=IXO1104_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03045;old_locus_tag=IXO1104_03015 NZ_CP047492.1 Protein Homology CDS 671303 671683 . - 0 ID=cds-WP_011257546.1;Parent=gene-IXO1104_RS03045;Dbxref=Genbank:WP_011257546.1;Name=WP_011257546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157413.1;locus_tag=IXO1104_RS03045;product=response regulator;protein_id=WP_011257546.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 671909 673836 . + . ID=gene-IXO1104_RS03050;Name=IXO1104_RS03050;end_range=673836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03050;old_locus_tag=IXO1104_03020;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 671909 673836 . + 0 ID=cds-IXO1104_RS03050;Parent=gene-IXO1104_RS03050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=673836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114624.1;locus_tag=IXO1104_RS03050;partial=true;product=methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 673983 675025 . + . ID=gene-IXO1104_RS03055;Name=IXO1104_RS03055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03055;old_locus_tag=IXO1104_03025;pseudo=true NZ_CP047492.1 Protein Homology CDS 673983 675025 . + 0 ID=cds-IXO1104_RS03055;Parent=gene-IXO1104_RS03055;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS03055;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 675158 676477 . - . ID=gene-IXO1104_RS03060;Name=IXO1104_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03060;old_locus_tag=IXO1104_03030 NZ_CP047492.1 Protein Homology CDS 675158 676477 . - 0 ID=cds-WP_133264952.1;Parent=gene-IXO1104_RS03060;Dbxref=Genbank:WP_133264952.1;Name=WP_133264952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03060;product=IS701 family transposase;protein_id=WP_133264952.1;transl_table=11 NZ_CP047492.1 RefSeq gene 677001 677195 . + . ID=gene-IXO1104_RS03065;Name=IXO1104_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03065;old_locus_tag=IXO1104_03035 NZ_CP047492.1 Protein Homology CDS 677001 677195 . + 0 ID=cds-WP_012446188.1;Parent=gene-IXO1104_RS03065;Dbxref=Genbank:WP_012446188.1;Name=WP_012446188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365412.1;locus_tag=IXO1104_RS03065;product=hypothetical protein;protein_id=WP_012446188.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 677504 678718 . - . ID=gene-IXO1104_RS03070;Name=IXO1104_RS03070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03070;old_locus_tag=IXO1104_03040;pseudo=true NZ_CP047492.1 Protein Homology CDS 677504 678718 . - 0 ID=cds-IXO1104_RS03070;Parent=gene-IXO1104_RS03070;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301250.1;locus_tag=IXO1104_RS03070;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 679029 680324 . + . ID=gene-IXO1104_RS03075;Name=IXO1104_RS03075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03075;pseudo=true NZ_CP047492.1 Protein Homology CDS 679029 680324 . + 0 ID=cds-IXO1104_RS03075;Parent=gene-IXO1104_RS03075;Note=internal stop;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157420.1;locus_tag=IXO1104_RS03075;product=histidine kinase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 680321 681106 . + . ID=gene-IXO1104_RS03080;Name=IXO1104_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03080;old_locus_tag=IXO1104_03050 NZ_CP047492.1 Protein Homology CDS 680321 681106 . + 0 ID=cds-WP_075240741.1;Parent=gene-IXO1104_RS03080;Dbxref=Genbank:WP_075240741.1;Name=WP_075240741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038759.1;locus_tag=IXO1104_RS03080;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_075240741.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 681280 681641 . + . ID=gene-IXO1104_RS03085;Name=IXO1104_RS03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03085;old_locus_tag=IXO1104_03055;pseudo=true NZ_CP047492.1 Protein Homology CDS 681280 681641 . + 0 ID=cds-IXO1104_RS03085;Parent=gene-IXO1104_RS03085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157422.1;locus_tag=IXO1104_RS03085;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 681807 683402 . + . ID=gene-IXO1104_RS03090;Name=IXO1104_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03090;old_locus_tag=IXO1104_03060 NZ_CP047492.1 Protein Homology CDS 681807 683402 . + 0 ID=cds-WP_011407535.1;Parent=gene-IXO1104_RS03090;Dbxref=Genbank:WP_011407535.1;Name=WP_011407535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803093.1;locus_tag=IXO1104_RS03090;product=APC family permease;protein_id=WP_011407535.1;transl_table=11 NZ_CP047492.1 RefSeq gene 683540 683616 . + . ID=gene-IXO1104_RS03095;Name=IXO1104_RS03095;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03095;old_locus_tag=IXO1104_03065 NZ_CP047492.1 cmsearch ncRNA 683540 683616 . + . ID=rna-IXO1104_RS03095;Parent=gene-IXO1104_RS03095;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03095;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 683540 683616 . + . ID=exon-IXO1104_RS03095-1;Parent=rna-IXO1104_RS03095;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03095;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 683734 684333 . - . ID=gene-IXO1104_RS03100;Name=IXO1104_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03100;old_locus_tag=IXO1104_03070 NZ_CP047492.1 Protein Homology CDS 683734 684333 . - 0 ID=cds-WP_027703239.1;Parent=gene-IXO1104_RS03100;Dbxref=Genbank:WP_027703239.1;Name=WP_027703239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118539.1;locus_tag=IXO1104_RS03100;product=hypothetical protein;protein_id=WP_027703239.1;transl_table=11 NZ_CP047492.1 RefSeq gene 684950 685807 . + . ID=gene-IXO1104_RS03105;Name=IXO1104_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03105;old_locus_tag=IXO1104_03075 NZ_CP047492.1 Protein Homology CDS 684950 685807 . + 0 ID=cds-WP_011407537.1;Parent=gene-IXO1104_RS03105;Dbxref=Genbank:WP_011407537.1;Name=WP_011407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407537.1;locus_tag=IXO1104_RS03105;product=DUF2236 domain-containing protein;protein_id=WP_011407537.1;transl_table=11 NZ_CP047492.1 RefSeq gene 686146 688215 . - . ID=gene-IXO1104_RS03110;Name=IXO1104_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03110;old_locus_tag=IXO1104_03080 NZ_CP047492.1 Protein Homology CDS 686146 688215 . - 0 ID=cds-WP_075240402.1;Parent=gene-IXO1104_RS03110;Dbxref=Genbank:WP_075240402.1;Name=WP_075240402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167581.1;locus_tag=IXO1104_RS03110;product=M13 family metallopeptidase;protein_id=WP_075240402.1;transl_table=11 NZ_CP047492.1 RefSeq gene 688366 689061 . - . ID=gene-IXO1104_RS03115;Name=IXO1104_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03115;old_locus_tag=IXO1104_03085 NZ_CP047492.1 Protein Homology CDS 688366 689061 . - 0 ID=cds-WP_011257561.1;Parent=gene-IXO1104_RS03115;Dbxref=Genbank:WP_011257561.1;Name=WP_011257561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573318.1;locus_tag=IXO1104_RS03115;product=glycosyltransferase;protein_id=WP_011257561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 689302 690297 . - . ID=gene-IXO1104_RS03120;Name=IXO1104_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03120;old_locus_tag=IXO1104_03090 NZ_CP047492.1 Protein Homology CDS 689302 690297 . - 0 ID=cds-WP_027703241.1;Parent=gene-IXO1104_RS03120;Dbxref=Genbank:WP_027703241.1;Name=WP_027703241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972965.1;locus_tag=IXO1104_RS03120;product=aldo/keto reductase;protein_id=WP_027703241.1;transl_table=11 NZ_CP047492.1 RefSeq gene 690437 691006 . - . ID=gene-IXO1104_RS03125;Name=IXO1104_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03125;old_locus_tag=IXO1104_03095 NZ_CP047492.1 Protein Homology CDS 690437 691006 . - 0 ID=cds-WP_011257563.1;Parent=gene-IXO1104_RS03125;Dbxref=Genbank:WP_011257563.1;Name=WP_011257563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009588901.1;locus_tag=IXO1104_RS03125;product=flavodoxin family protein;protein_id=WP_011257563.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 691122 691469 . + . ID=gene-IXO1104_RS03130;Name=IXO1104_RS03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03130;old_locus_tag=IXO1104_03100;pseudo=true NZ_CP047492.1 Protein Homology CDS 691122 691469 . + 0 ID=cds-IXO1104_RS03130;Parent=gene-IXO1104_RS03130;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301238.1;locus_tag=IXO1104_RS03130;product=DoxX family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 691498 692316 . + . ID=gene-IXO1104_RS03135;Name=IXO1104_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03135;old_locus_tag=IXO1104_03105 NZ_CP047492.1 Protein Homology CDS 691498 692316 . + 0 ID=cds-WP_011407542.1;Parent=gene-IXO1104_RS03135;Dbxref=Genbank:WP_011407542.1;Name=WP_011407542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489595.1;locus_tag=IXO1104_RS03135;product=dioxygenase;protein_id=WP_011407542.1;transl_table=11 NZ_CP047492.1 RefSeq gene 692514 693758 . + . ID=gene-IXO1104_RS03140;Name=IXO1104_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03140;old_locus_tag=IXO1104_03110 NZ_CP047492.1 Protein Homology CDS 692514 693758 . + 0 ID=cds-WP_011257567.1;Parent=gene-IXO1104_RS03140;Dbxref=Genbank:WP_011257567.1;Name=WP_011257567.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167194.1;locus_tag=IXO1104_RS03140;product=putative DNA modification/repair radical SAM protein;protein_id=WP_011257567.1;transl_table=11 NZ_CP047492.1 RefSeq gene 693765 695213 . + . ID=gene-IXO1104_RS03145;Name=IXO1104_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03145;old_locus_tag=IXO1104_03115 NZ_CP047492.1 Protein Homology CDS 693765 695213 . + 0 ID=cds-WP_044757123.1;Parent=gene-IXO1104_RS03145;Dbxref=Genbank:WP_044757123.1;Name=WP_044757123.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365450.1;locus_tag=IXO1104_RS03145;product=UdgX family uracil-DNA binding protein;protein_id=WP_044757123.1;transl_table=11 NZ_CP047492.1 RefSeq gene 695445 695521 . + . ID=gene-IXO1104_RS03150;Name=IXO1104_RS03150;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03150;old_locus_tag=IXO1104_03120 NZ_CP047492.1 cmsearch ncRNA 695445 695521 . + . ID=rna-IXO1104_RS03150;Parent=gene-IXO1104_RS03150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03150;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 695445 695521 . + . ID=exon-IXO1104_RS03150-1;Parent=rna-IXO1104_RS03150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03150;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 695853 696410 . - . ID=gene-IXO1104_RS03155;Name=IXO1104_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03155;old_locus_tag=IXO1104_03125 NZ_CP047492.1 Protein Homology CDS 695853 696410 . - 0 ID=cds-WP_011407544.1;Parent=gene-IXO1104_RS03155;Dbxref=Genbank:WP_011407544.1;Name=WP_011407544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489588.1;locus_tag=IXO1104_RS03155;product=fasciclin domain-containing protein;protein_id=WP_011407544.1;transl_table=11 NZ_CP047492.1 RefSeq gene 696808 697443 . + . ID=gene-IXO1104_RS03160;Name=IXO1104_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03160;old_locus_tag=IXO1104_03130 NZ_CP047492.1 GeneMarkS-2+ CDS 696808 697443 . + 0 ID=cds-WP_228329679.1;Parent=gene-IXO1104_RS03160;Dbxref=Genbank:WP_228329679.1;Name=WP_228329679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS03160;product=hypothetical protein;protein_id=WP_228329679.1;transl_table=11 NZ_CP047492.1 RefSeq gene 697493 697687 . + . ID=gene-IXO1104_RS03165;Name=IXO1104_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03165 NZ_CP047492.1 GeneMarkS-2+ CDS 697493 697687 . + 0 ID=cds-WP_059317499.1;Parent=gene-IXO1104_RS03165;Dbxref=Genbank:WP_059317499.1;Name=WP_059317499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS03165;product=hypothetical protein;protein_id=WP_059317499.1;transl_table=11 NZ_CP047492.1 RefSeq gene 697918 699555 . + . ID=gene-IXO1104_RS03170;Name=IXO1104_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03170;old_locus_tag=IXO1104_03135 NZ_CP047492.1 Protein Homology CDS 697918 699555 . + 0 ID=cds-WP_011257573.1;Parent=gene-IXO1104_RS03170;Dbxref=Genbank:WP_011257573.1;Name=WP_011257573.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504747.1;locus_tag=IXO1104_RS03170;product=Na+/H+ antiporter;protein_id=WP_011257573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 699802 700746 . + . ID=gene-IXO1104_RS03175;Name=IXO1104_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03175;old_locus_tag=IXO1104_03140 NZ_CP047492.1 Protein Homology CDS 699802 700746 . + 0 ID=cds-WP_075238989.1;Parent=gene-IXO1104_RS03175;Dbxref=Genbank:WP_075238989.1;Name=WP_075238989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448573.1;locus_tag=IXO1104_RS03175;product=ABC transporter ATP-binding protein;protein_id=WP_075238989.1;transl_table=11 NZ_CP047492.1 RefSeq gene 700743 701504 . + . ID=gene-IXO1104_RS03180;Name=IXO1104_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03180;old_locus_tag=IXO1104_03145 NZ_CP047492.1 Protein Homology CDS 700743 701504 . + 0 ID=cds-WP_075240403.1;Parent=gene-IXO1104_RS03180;Dbxref=Genbank:WP_075240403.1;Name=WP_075240403.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157438.1;locus_tag=IXO1104_RS03180;product=ABC transporter permease;protein_id=WP_075240403.1;transl_table=11 NZ_CP047492.1 RefSeq gene 701918 702184 . - . ID=gene-IXO1104_RS03185;Name=IXO1104_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03185;old_locus_tag=IXO1104_03150 NZ_CP047492.1 Protein Homology CDS 701918 702184 . - 0 ID=cds-WP_011407549.1;Parent=gene-IXO1104_RS03185;Dbxref=Genbank:WP_011407549.1;Name=WP_011407549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038741.1;locus_tag=IXO1104_RS03185;product=DUF3297 family protein;protein_id=WP_011407549.1;transl_table=11 NZ_CP047492.1 RefSeq gene 702350 702886 . + . ID=gene-IXO1104_RS03190;Name=IXO1104_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03190;old_locus_tag=IXO1104_03155 NZ_CP047492.1 Protein Homology CDS 702350 702886 . + 0 ID=cds-WP_027703244.1;Parent=gene-IXO1104_RS03190;Dbxref=Genbank:WP_027703244.1;Name=WP_027703244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379770.1;locus_tag=IXO1104_RS03190;product=hypothetical protein;protein_id=WP_027703244.1;transl_table=11 NZ_CP047492.1 RefSeq gene 703005 704912 . - . ID=gene-IXO1104_RS03195;Name=IXO1104_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03195;old_locus_tag=IXO1104_03160 NZ_CP047492.1 Protein Homology CDS 703005 704912 . - 0 ID=cds-WP_075240401.1;Parent=gene-IXO1104_RS03195;Dbxref=Genbank:WP_075240401.1;Name=WP_075240401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114556.1;locus_tag=IXO1104_RS03195;product=S8 family serine peptidase;protein_id=WP_075240401.1;transl_table=11 NZ_CP047492.1 RefSeq gene 704959 707928 . - . ID=gene-IXO1104_RS03200;Name=IXO1104_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03200;old_locus_tag=IXO1104_03165 NZ_CP047492.1 Protein Homology CDS 704959 707928 . - 0 ID=cds-WP_075239817.1;Parent=gene-IXO1104_RS03200;Dbxref=Genbank:WP_075239817.1;Name=WP_075239817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113609.1;locus_tag=IXO1104_RS03200;product=adhesin;protein_id=WP_075239817.1;transl_table=11 NZ_CP047492.1 RefSeq gene 708023 709507 . + . ID=gene-IXO1104_RS03205;Name=IXO1104_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03205;old_locus_tag=IXO1104_03170 NZ_CP047492.1 Protein Homology CDS 708023 709507 . + 0 ID=cds-WP_229002657.1;Parent=gene-IXO1104_RS03205;Dbxref=Genbank:WP_229002657.1;Name=WP_229002657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407553.1;locus_tag=IXO1104_RS03205;product=ATP-binding protein;protein_id=WP_229002657.1;transl_table=11 NZ_CP047492.1 RefSeq gene 709489 710217 . - . ID=gene-IXO1104_RS03210;Name=IXO1104_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03210;old_locus_tag=IXO1104_03175 NZ_CP047492.1 Protein Homology CDS 709489 710217 . - 0 ID=cds-WP_011257581.1;Parent=gene-IXO1104_RS03210;Dbxref=Genbank:WP_011257581.1;Name=WP_011257581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302989.1;locus_tag=IXO1104_RS03210;product=response regulator transcription factor;protein_id=WP_011257581.1;transl_table=11 NZ_CP047492.1 RefSeq gene 710393 710677 . - . ID=gene-IXO1104_RS03215;Name=IXO1104_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03215;old_locus_tag=IXO1104_03180 NZ_CP047492.1 Protein Homology CDS 710393 710677 . - 0 ID=cds-WP_011257582.1;Parent=gene-IXO1104_RS03215;Dbxref=Genbank:WP_011257582.1;Name=WP_011257582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504739.1;locus_tag=IXO1104_RS03215;product=DUF4031 domain-containing protein;protein_id=WP_011257582.1;transl_table=11 NZ_CP047492.1 RefSeq gene 710686 711252 . - . ID=gene-IXO1104_RS03220;Name=IXO1104_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03220;old_locus_tag=IXO1104_03185 NZ_CP047492.1 Protein Homology CDS 710686 711252 . - 0 ID=cds-WP_075239816.1;Parent=gene-IXO1104_RS03220;Dbxref=Genbank:WP_075239816.1;Name=WP_075239816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257583.1;locus_tag=IXO1104_RS03220;product=hypothetical protein;protein_id=WP_075239816.1;transl_table=11 NZ_CP047492.1 RefSeq gene 711444 711521 . + . ID=gene-IXO1104_RS03225;Name=IXO1104_RS03225;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03225;old_locus_tag=IXO1104_03190 NZ_CP047492.1 cmsearch ncRNA 711444 711521 . + . ID=rna-IXO1104_RS03225;Parent=gene-IXO1104_RS03225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03225;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 711444 711521 . + . ID=exon-IXO1104_RS03225-1;Parent=rna-IXO1104_RS03225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03225;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 711639 712772 . - . ID=gene-IXO1104_RS03230;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03230;old_locus_tag=IXO1104_03195 NZ_CP047492.1 Protein Homology CDS 711639 712772 . - 0 ID=cds-WP_011257584.1;Parent=gene-IXO1104_RS03230;Dbxref=Genbank:WP_011257584.1;Name=WP_011257584.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911263.1;locus_tag=IXO1104_RS03230;product=flagellar motor protein MotB;protein_id=WP_011257584.1;transl_table=11 NZ_CP047492.1 RefSeq gene 712783 713637 . - . ID=gene-IXO1104_RS03235;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03235;old_locus_tag=IXO1104_03200 NZ_CP047492.1 Protein Homology CDS 712783 713637 . - 0 ID=cds-WP_008573335.1;Parent=gene-IXO1104_RS03235;Dbxref=Genbank:WP_008573335.1;Name=WP_008573335.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303316.1;locus_tag=IXO1104_RS03235;product=flagellar motor stator protein MotA;protein_id=WP_008573335.1;transl_table=11 NZ_CP047492.1 RefSeq gene 713735 714226 . - . ID=gene-IXO1104_RS03240;Name=IXO1104_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03240;old_locus_tag=IXO1104_03205 NZ_CP047492.1 Protein Homology CDS 713735 714226 . - 0 ID=cds-WP_027703249.1;Parent=gene-IXO1104_RS03240;Dbxref=Genbank:WP_027703249.1;Name=WP_027703249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157444.1;locus_tag=IXO1104_RS03240;product=MliC family protein;protein_id=WP_027703249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 714532 714996 . - . ID=gene-IXO1104_RS03245;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03245;old_locus_tag=IXO1104_03210 NZ_CP047492.1 Protein Homology CDS 714532 714996 . - 0 ID=cds-WP_011257586.1;Parent=gene-IXO1104_RS03245;Dbxref=Genbank:WP_011257586.1;Name=WP_011257586.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489131.1;locus_tag=IXO1104_RS03245;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011257586.1;transl_table=11 NZ_CP047492.1 RefSeq gene 715277 715702 . + . ID=gene-IXO1104_RS03250;Name=IXO1104_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03250;old_locus_tag=IXO1104_03215 NZ_CP047492.1 Protein Homology CDS 715277 715702 . + 0 ID=cds-WP_012446162.1;Parent=gene-IXO1104_RS03250;Dbxref=Genbank:WP_012446162.1;Name=WP_012446162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157446.1;locus_tag=IXO1104_RS03250;product=hypothetical protein;protein_id=WP_012446162.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 715754 716232 . - . ID=gene-IXO1104_RS03255;Name=IXO1104_RS03255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03255;old_locus_tag=IXO1104_03220;pseudo=true NZ_CP047492.1 Protein Homology CDS 715754 716232 . - 0 ID=cds-IXO1104_RS03255;Parent=gene-IXO1104_RS03255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166392.1;locus_tag=IXO1104_RS03255;product=Lrp/AsnC ligand binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 716381 717670 . + . ID=gene-IXO1104_RS03260;Name=IXO1104_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03260;old_locus_tag=IXO1104_03225 NZ_CP047492.1 Protein Homology CDS 716381 717670 . + 0 ID=cds-WP_027703250.1;Parent=gene-IXO1104_RS03260;Dbxref=Genbank:WP_027703250.1;Name=WP_027703250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963042.1;locus_tag=IXO1104_RS03260;product=D-amino acid dehydrogenase;protein_id=WP_027703250.1;transl_table=11 NZ_CP047492.1 RefSeq gene 717670 718770 . + . ID=gene-IXO1104_RS03265;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=IXO1104_RS03265;old_locus_tag=IXO1104_03230 NZ_CP047492.1 Protein Homology CDS 717670 718770 . + 0 ID=cds-WP_011257590.1;Parent=gene-IXO1104_RS03265;Dbxref=Genbank:WP_011257590.1;Name=WP_011257590.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504732.1;locus_tag=IXO1104_RS03265;product=alanine racemase;protein_id=WP_011257590.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 719173 719744 . - . ID=gene-IXO1104_RS03270;Name=IXO1104_RS03270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03270;old_locus_tag=IXO1104_03235;pseudo=true NZ_CP047492.1 Protein Homology CDS 719173 719744 . - 0 ID=cds-IXO1104_RS03270;Parent=gene-IXO1104_RS03270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992142.1;locus_tag=IXO1104_RS03270;product=DUF3016 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 719993 720439 . + . ID=gene-IXO1104_RS03275;Name=IXO1104_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03275;old_locus_tag=IXO1104_03240 NZ_CP047492.1 Protein Homology CDS 719993 720439 . + 0 ID=cds-WP_027703251.1;Parent=gene-IXO1104_RS03275;Dbxref=Genbank:WP_027703251.1;Name=WP_027703251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372107.1;locus_tag=IXO1104_RS03275;product=hypothetical protein;protein_id=WP_027703251.1;transl_table=11 NZ_CP047492.1 RefSeq gene 720426 720734 . + . ID=gene-IXO1104_RS03280;Name=IXO1104_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03280;old_locus_tag=IXO1104_03245 NZ_CP047492.1 Protein Homology CDS 720426 720734 . + 0 ID=cds-WP_011407559.1;Parent=gene-IXO1104_RS03280;Dbxref=Genbank:WP_011407559.1;Name=WP_011407559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407559.1;locus_tag=IXO1104_RS03280;product=hypothetical protein;protein_id=WP_011407559.1;transl_table=11 NZ_CP047492.1 RefSeq gene 720821 722857 . + . ID=gene-IXO1104_RS03285;Name=IXO1104_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03285;old_locus_tag=IXO1104_03250 NZ_CP047492.1 Protein Homology CDS 720821 722857 . + 0 ID=cds-WP_075239815.1;Parent=gene-IXO1104_RS03285;Dbxref=Genbank:WP_075239815.1;Name=WP_075239815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=IXO1104_RS03285;product=PAS domain-containing sensor histidine kinase;protein_id=WP_075239815.1;transl_table=11 NZ_CP047492.1 RefSeq gene 723138 723212 . + . ID=gene-IXO1104_RS03290;Name=IXO1104_RS03290;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03290;old_locus_tag=IXO1104_03255 NZ_CP047492.1 cmsearch ncRNA 723138 723212 . + . ID=rna-IXO1104_RS03290;Parent=gene-IXO1104_RS03290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03290;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 723138 723212 . + . ID=exon-IXO1104_RS03290-1;Parent=rna-IXO1104_RS03290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03290;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 723342 723650 . + . ID=gene-IXO1104_RS03295;Name=IXO1104_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03295;old_locus_tag=IXO1104_03260 NZ_CP047492.1 Protein Homology CDS 723342 723650 . + 0 ID=cds-WP_011407561.1;Parent=gene-IXO1104_RS03295;Dbxref=Genbank:WP_011407561.1;Name=WP_011407561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911254.1;locus_tag=IXO1104_RS03295;product=DUF3247 family protein;protein_id=WP_011407561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 723739 725076 . + . ID=gene-IXO1104_RS03300;Name=IXO1104_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03300;old_locus_tag=IXO1104_03265 NZ_CP047492.1 Protein Homology CDS 723739 725076 . + 0 ID=cds-WP_011257596.1;Parent=gene-IXO1104_RS03300;Dbxref=Genbank:WP_011257596.1;Name=WP_011257596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922022.1;locus_tag=IXO1104_RS03300;product=sorbosone dehydrogenase family protein;protein_id=WP_011257596.1;transl_table=11 NZ_CP047492.1 RefSeq gene 725081 725157 . - . ID=gene-IXO1104_RS03305;Name=IXO1104_RS03305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03305;old_locus_tag=IXO1104_03270 NZ_CP047492.1 cmsearch ncRNA 725081 725157 . - . ID=rna-IXO1104_RS03305;Parent=gene-IXO1104_RS03305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03305;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 725081 725157 . - . ID=exon-IXO1104_RS03305-1;Parent=rna-IXO1104_RS03305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03305;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 725637 725882 . - . ID=gene-IXO1104_RS03310;Name=IXO1104_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03310;old_locus_tag=IXO1104_03275 NZ_CP047492.1 Protein Homology CDS 725637 725882 . - 0 ID=cds-WP_024710498.1;Parent=gene-IXO1104_RS03310;Dbxref=Genbank:WP_024710498.1;Name=WP_024710498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446155.1;locus_tag=IXO1104_RS03310;product=hypothetical protein;protein_id=WP_024710498.1;transl_table=11 NZ_CP047492.1 RefSeq gene 726070 727137 . + . ID=gene-IXO1104_RS03315;Name=IXO1104_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03315;old_locus_tag=IXO1104_03280 NZ_CP047492.1 Protein Homology CDS 726070 727137 . + 0 ID=cds-WP_027703254.1;Parent=gene-IXO1104_RS03315;Dbxref=Genbank:WP_027703254.1;Name=WP_027703254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300358.1;locus_tag=IXO1104_RS03315;product=class I SAM-dependent methyltransferase;protein_id=WP_027703254.1;transl_table=11 NZ_CP047492.1 RefSeq gene 727134 727847 . + . ID=gene-IXO1104_RS03320;Name=IXO1104_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03320;old_locus_tag=IXO1104_03285 NZ_CP047492.1 Protein Homology CDS 727134 727847 . + 0 ID=cds-WP_011257599.1;Parent=gene-IXO1104_RS03320;Dbxref=Genbank:WP_011257599.1;Name=WP_011257599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171645.1;locus_tag=IXO1104_RS03320;product=rRNA pseudouridine synthase;protein_id=WP_011257599.1;transl_table=11 NZ_CP047492.1 RefSeq gene 727844 728524 . + . ID=gene-IXO1104_RS03325;Name=IXO1104_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03325;old_locus_tag=IXO1104_03290 NZ_CP047492.1 Protein Homology CDS 727844 728524 . + 0 ID=cds-WP_011257600.1;Parent=gene-IXO1104_RS03325;Dbxref=Genbank:WP_011257600.1;Name=WP_011257600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304342.1;locus_tag=IXO1104_RS03325;product=HAD family phosphatase;protein_id=WP_011257600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 728660 729466 . - . ID=gene-IXO1104_RS03330;Name=IXO1104_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03330;old_locus_tag=IXO1104_03295 NZ_CP047492.1 Protein Homology CDS 728660 729466 . - 0 ID=cds-WP_011407568.1;Parent=gene-IXO1104_RS03330;Dbxref=Genbank:WP_011407568.1;Name=WP_011407568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116655.1;locus_tag=IXO1104_RS03330;product=SDR family oxidoreductase;protein_id=WP_011407568.1;transl_table=11 NZ_CP047492.1 RefSeq gene 729888 730448 . - . ID=gene-IXO1104_RS03335;Name=IXO1104_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03335;old_locus_tag=IXO1104_03300 NZ_CP047492.1 Protein Homology CDS 729888 730448 . - 0 ID=cds-WP_011407569.1;Parent=gene-IXO1104_RS03335;Dbxref=Genbank:WP_011407569.1;Name=WP_011407569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157459.1;locus_tag=IXO1104_RS03335;product=DUF1415 domain-containing protein;protein_id=WP_011407569.1;transl_table=11 NZ_CP047492.1 RefSeq gene 730607 731470 . - . ID=gene-IXO1104_RS03340;Name=IXO1104_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03340;old_locus_tag=IXO1104_03305 NZ_CP047492.1 Protein Homology CDS 730607 731470 . - 0 ID=cds-WP_011257603.1;Parent=gene-IXO1104_RS03340;Dbxref=Genbank:WP_011257603.1;Name=WP_011257603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372078.1;locus_tag=IXO1104_RS03340;product=lysophospholipase;protein_id=WP_011257603.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 731457 732594 . - . ID=gene-IXO1104_RS03345;Name=IXO1104_RS03345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03345;old_locus_tag=IXO1104_03310;pseudo=true NZ_CP047492.1 Protein Homology CDS 731457 732594 . - 0 ID=cds-IXO1104_RS03345;Parent=gene-IXO1104_RS03345;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926812.1;locus_tag=IXO1104_RS03345;product=response regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 732590 733048 . - . ID=gene-IXO1104_RS03350;Name=IXO1104_RS03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03350;old_locus_tag=IXO1104_03315;partial=true;pseudo=true;start_range=.,732590 NZ_CP047492.1 Protein Homology CDS 732590 733048 . - 0 ID=cds-IXO1104_RS03350;Parent=gene-IXO1104_RS03350;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171646.1;locus_tag=IXO1104_RS03350;partial=true;product=hypothetical protein;pseudo=true;start_range=.,732590;transl_table=11 NZ_CP047492.1 RefSeq gene 733194 733679 . - . ID=gene-IXO1104_RS03355;Name=IXO1104_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03355;old_locus_tag=IXO1104_03320 NZ_CP047492.1 Protein Homology CDS 733194 733679 . - 0 ID=cds-WP_011257604.1;Parent=gene-IXO1104_RS03355;Dbxref=Genbank:WP_011257604.1;Name=WP_011257604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300350.1;locus_tag=IXO1104_RS03355;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_011257604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 733787 734683 . + . ID=gene-IXO1104_RS03360;Name=IXO1104_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03360;old_locus_tag=IXO1104_03325 NZ_CP047492.1 Protein Homology CDS 733787 734683 . + 0 ID=cds-WP_011257605.1;Parent=gene-IXO1104_RS03360;Dbxref=Genbank:WP_011257605.1;Name=WP_011257605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348672.1;locus_tag=IXO1104_RS03360;product=DMT family transporter;protein_id=WP_011257605.1;transl_table=11 NZ_CP047492.1 RefSeq gene 734802 735809 . + . ID=gene-IXO1104_RS03365;Name=IXO1104_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03365;old_locus_tag=IXO1104_03330 NZ_CP047492.1 Protein Homology CDS 734802 735809 . + 0 ID=cds-WP_012446148.1;Parent=gene-IXO1104_RS03365;Dbxref=Genbank:WP_012446148.1;Name=WP_012446148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038713.1;locus_tag=IXO1104_RS03365;product=methionine ABC transporter ATP-binding protein;protein_id=WP_012446148.1;transl_table=11 NZ_CP047492.1 RefSeq gene 735806 736501 . + . ID=gene-IXO1104_RS03370;Name=IXO1104_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03370;old_locus_tag=IXO1104_03335 NZ_CP047492.1 Protein Homology CDS 735806 736501 . + 0 ID=cds-WP_011257607.1;Parent=gene-IXO1104_RS03370;Dbxref=Genbank:WP_011257607.1;Name=WP_011257607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489185.1;locus_tag=IXO1104_RS03370;product=ABC transporter permease;protein_id=WP_011257607.1;transl_table=11 NZ_CP047492.1 RefSeq gene 736596 737396 . + . ID=gene-IXO1104_RS03375;Name=IXO1104_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03375;old_locus_tag=IXO1104_03340 NZ_CP047492.1 Protein Homology CDS 736596 737396 . + 0 ID=cds-WP_012446146.1;Parent=gene-IXO1104_RS03375;Dbxref=Genbank:WP_012446146.1;Name=WP_012446146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157466.1;locus_tag=IXO1104_RS03375;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_012446146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 737773 738330 . + . ID=gene-IXO1104_RS03380;Name=IXO1104_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03380;old_locus_tag=IXO1104_03345 NZ_CP047492.1 Protein Homology CDS 737773 738330 . + 0 ID=cds-WP_012446145.1;Parent=gene-IXO1104_RS03380;Dbxref=Genbank:WP_012446145.1;Name=WP_012446145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450413.1;locus_tag=IXO1104_RS03380;product=DUF1453 family protein;protein_id=WP_012446145.1;transl_table=11 NZ_CP047492.1 RefSeq gene 738615 739301 . - . ID=gene-IXO1104_RS03385;Name=IXO1104_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03385;old_locus_tag=IXO1104_03350 NZ_CP047492.1 Protein Homology CDS 738615 739301 . - 0 ID=cds-WP_044757117.1;Parent=gene-IXO1104_RS03385;Dbxref=Genbank:WP_044757117.1;Name=WP_044757117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974312.1;locus_tag=IXO1104_RS03385;product=outer membrane beta-barrel protein;protein_id=WP_044757117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 739443 740003 . + . ID=gene-IXO1104_RS03390;Name=IXO1104_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03390;old_locus_tag=IXO1104_03355 NZ_CP047492.1 Protein Homology CDS 739443 740003 . + 0 ID=cds-WP_011257611.1;Parent=gene-IXO1104_RS03390;Dbxref=Genbank:WP_011257611.1;Name=WP_011257611.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472749.1;locus_tag=IXO1104_RS03390;product=DNA-deoxyinosine glycosylase;protein_id=WP_011257611.1;transl_table=11 NZ_CP047492.1 RefSeq gene 740185 740943 . + . ID=gene-IXO1104_RS03395;Name=IXO1104_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03395;old_locus_tag=IXO1104_03360 NZ_CP047492.1 Protein Homology CDS 740185 740943 . + 0 ID=cds-WP_011257612.1;Parent=gene-IXO1104_RS03395;Dbxref=Genbank:WP_011257612.1;Name=WP_011257612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962078.1;locus_tag=IXO1104_RS03395;product=DUF2884 family protein;protein_id=WP_011257612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 741073 742869 . + . ID=gene-IXO1104_RS03400;Name=IXO1104_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03400;old_locus_tag=IXO1104_03365 NZ_CP047492.1 Protein Homology CDS 741073 742869 . + 0 ID=cds-WP_012446142.1;Parent=gene-IXO1104_RS03400;Dbxref=Genbank:WP_012446142.1;Name=WP_012446142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974307.1;locus_tag=IXO1104_RS03400;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_012446142.1;transl_table=11 NZ_CP047492.1 RefSeq gene 742866 743513 . + . ID=gene-IXO1104_RS03405;Name=IXO1104_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03405;old_locus_tag=IXO1104_03370 NZ_CP047492.1 Protein Homology CDS 742866 743513 . + 0 ID=cds-WP_012446141.1;Parent=gene-IXO1104_RS03405;Dbxref=Genbank:WP_012446141.1;Name=WP_012446141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237994.1;locus_tag=IXO1104_RS03405;product=hypothetical protein;protein_id=WP_012446141.1;transl_table=11 NZ_CP047492.1 RefSeq gene 743530 745353 . + . ID=gene-IXO1104_RS03410;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03410;old_locus_tag=IXO1104_03375 NZ_CP047492.1 Protein Homology CDS 743530 745353 . + 0 ID=cds-WP_012446140.1;Parent=gene-IXO1104_RS03410;Dbxref=Genbank:WP_012446140.1;Name=WP_012446140.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114723.1;locus_tag=IXO1104_RS03410;product=dihydrolipoyl dehydrogenase;protein_id=WP_012446140.1;transl_table=11 NZ_CP047492.1 RefSeq gene 745415 745705 . + . ID=gene-IXO1104_RS03415;Name=IXO1104_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03415;old_locus_tag=IXO1104_03380 NZ_CP047492.1 Protein Homology CDS 745415 745705 . + 0 ID=cds-WP_011257616.1;Parent=gene-IXO1104_RS03415;Dbxref=Genbank:WP_011257616.1;Name=WP_011257616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910286.1;locus_tag=IXO1104_RS03415;product=hypothetical protein;protein_id=WP_011257616.1;transl_table=11 NZ_CP047492.1 RefSeq gene 745844 746656 . - . ID=gene-IXO1104_RS03420;Name=IXO1104_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03420;old_locus_tag=IXO1104_03385 NZ_CP047492.1 Protein Homology CDS 745844 746656 . - 0 ID=cds-WP_011257617.1;Parent=gene-IXO1104_RS03420;Dbxref=Genbank:WP_011257617.1;Name=WP_011257617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171127.1;locus_tag=IXO1104_RS03420;product=hypothetical protein;protein_id=WP_011257617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 747189 747554 . + . ID=gene-IXO1104_RS03425;Name=IXO1104_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03425;old_locus_tag=IXO1104_03390 NZ_CP047492.1 Protein Homology CDS 747189 747554 . + 0 ID=cds-WP_011407576.1;Parent=gene-IXO1104_RS03425;Dbxref=Genbank:WP_011407576.1;Name=WP_011407576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155241.1;locus_tag=IXO1104_RS03425;product=hypothetical protein;protein_id=WP_011407576.1;transl_table=11 NZ_CP047492.1 RefSeq gene 747580 748380 . + . ID=gene-IXO1104_RS03430;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03430;old_locus_tag=IXO1104_03395 NZ_CP047492.1 Protein Homology CDS 747580 748380 . + 0 ID=cds-WP_011257619.1;Parent=gene-IXO1104_RS03430;Dbxref=Genbank:WP_011257619.1;Name=WP_011257619.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814108.1;locus_tag=IXO1104_RS03430;product=F0F1 ATP synthase subunit A;protein_id=WP_011257619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 748453 748755 . + . ID=gene-IXO1104_RS03435;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=IXO1104_RS03435;old_locus_tag=IXO1104_03400 NZ_CP047492.1 Protein Homology CDS 748453 748755 . + 0 ID=cds-WP_011257620.1;Parent=gene-IXO1104_RS03435;Dbxref=Genbank:WP_011257620.1;Name=WP_011257620.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814105.1;locus_tag=IXO1104_RS03435;product=F0F1 ATP synthase subunit C;protein_id=WP_011257620.1;transl_table=11 NZ_CP047492.1 RefSeq gene 748870 749340 . + . ID=gene-IXO1104_RS03440;Name=IXO1104_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03440;old_locus_tag=IXO1104_03405 NZ_CP047492.1 Protein Homology CDS 748870 749340 . + 0 ID=cds-WP_011257621.1;Parent=gene-IXO1104_RS03440;Dbxref=Genbank:WP_011257621.1;Name=WP_011257621.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901014.1;locus_tag=IXO1104_RS03440;product=F0F1 ATP synthase subunit B;protein_id=WP_011257621.1;transl_table=11 NZ_CP047492.1 RefSeq gene 749344 749871 . + . ID=gene-IXO1104_RS03445;Name=IXO1104_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03445;old_locus_tag=IXO1104_03410 NZ_CP047492.1 Protein Homology CDS 749344 749871 . + 0 ID=cds-WP_011257622.1;Parent=gene-IXO1104_RS03445;Dbxref=Genbank:WP_011257622.1;Name=WP_011257622.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304550.1;locus_tag=IXO1104_RS03445;product=F0F1 ATP synthase subunit delta;protein_id=WP_011257622.1;transl_table=11 NZ_CP047492.1 RefSeq gene 749919 751466 . + . ID=gene-IXO1104_RS03450;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03450;old_locus_tag=IXO1104_03415 NZ_CP047492.1 Protein Homology CDS 749919 751466 . + 0 ID=cds-WP_011257623.1;Parent=gene-IXO1104_RS03450;Dbxref=Genbank:WP_011257623.1;Name=WP_011257623.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=IXO1104_RS03450;product=F0F1 ATP synthase subunit alpha;protein_id=WP_011257623.1;transl_table=11 NZ_CP047492.1 RefSeq gene 751660 752523 . + . ID=gene-IXO1104_RS03455;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=IXO1104_RS03455;old_locus_tag=IXO1104_03420 NZ_CP047492.1 Protein Homology CDS 751660 752523 . + 0 ID=cds-WP_011257624.1;Parent=gene-IXO1104_RS03455;Dbxref=Genbank:WP_011257624.1;Name=WP_011257624.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=IXO1104_RS03455;product=F0F1 ATP synthase subunit gamma;protein_id=WP_011257624.1;transl_table=11 NZ_CP047492.1 RefSeq gene 752668 754074 . + . ID=gene-IXO1104_RS03460;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=IXO1104_RS03460;old_locus_tag=IXO1104_03425 NZ_CP047492.1 Protein Homology CDS 752668 754074 . + 0 ID=cds-WP_011257625.1;Parent=gene-IXO1104_RS03460;Dbxref=Genbank:WP_011257625.1;Name=WP_011257625.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504697.1;locus_tag=IXO1104_RS03460;product=F0F1 ATP synthase subunit beta;protein_id=WP_011257625.1;transl_table=11 NZ_CP047492.1 RefSeq gene 754218 754640 . + . ID=gene-IXO1104_RS03465;Name=IXO1104_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03465;old_locus_tag=IXO1104_03430 NZ_CP047492.1 Protein Homology CDS 754218 754640 . + 0 ID=cds-WP_011257626.1;Parent=gene-IXO1104_RS03465;Dbxref=Genbank:WP_011257626.1;Name=WP_011257626.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407577.1;locus_tag=IXO1104_RS03465;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_011257626.1;transl_table=11 NZ_CP047492.1 RefSeq gene 754872 755441 . + . ID=gene-IXO1104_RS03470;Name=IXO1104_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03470;old_locus_tag=IXO1104_03435 NZ_CP047492.1 Protein Homology CDS 754872 755441 . + 0 ID=cds-WP_011407578.1;Parent=gene-IXO1104_RS03470;Dbxref=Genbank:WP_011407578.1;Name=WP_011407578.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371987.1;locus_tag=IXO1104_RS03470;product=chorismate mutase;protein_id=WP_011407578.1;transl_table=11 NZ_CP047492.1 RefSeq gene 755964 756347 . - . ID=gene-IXO1104_RS03475;Name=IXO1104_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03475;old_locus_tag=IXO1104_03440 NZ_CP047492.1 Protein Homology CDS 755964 756347 . - 0 ID=cds-WP_011257628.1;Parent=gene-IXO1104_RS03475;Dbxref=Genbank:WP_011257628.1;Name=WP_011257628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484015.1;locus_tag=IXO1104_RS03475;product=GtrA family protein;protein_id=WP_011257628.1;transl_table=11 NZ_CP047492.1 RefSeq gene 756492 757856 . + . ID=gene-IXO1104_RS03480;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=IXO1104_RS03480;old_locus_tag=IXO1104_03445 NZ_CP047492.1 Protein Homology CDS 756492 757856 . + 0 ID=cds-WP_027703258.1;Parent=gene-IXO1104_RS03480;Dbxref=Genbank:WP_027703258.1;Name=WP_027703258.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407581.1;locus_tag=IXO1104_RS03480;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_027703258.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 758184 758342 . - . ID=gene-IXO1104_RS03485;Name=IXO1104_RS03485;end_range=758342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03485;old_locus_tag=IXO1104_03450;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 758184 758342 . - 0 ID=cds-IXO1104_RS03485;Parent=gene-IXO1104_RS03485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=758342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926625.1;locus_tag=IXO1104_RS03485;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 758391 758564 . + . ID=gene-IXO1104_RS03490;Name=IXO1104_RS03490;end_range=758564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03490;old_locus_tag=IXO1104_03455;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 758391 758564 . + 0 ID=cds-IXO1104_RS03490;Parent=gene-IXO1104_RS03490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=758564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS03490;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 758582 759547 . - . ID=gene-IXO1104_RS03495;Name=IXO1104_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03495;old_locus_tag=IXO1104_03460 NZ_CP047492.1 Protein Homology CDS 758582 759547 . - 0 ID=cds-WP_115862296.1;Parent=gene-IXO1104_RS03495;Dbxref=Genbank:WP_115862296.1;Name=WP_115862296.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS03495;product=IS1595 family transposase;protein_id=WP_115862296.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 759631 760220 . + . ID=gene-IXO1104_RS03500;Name=IXO1104_RS03500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03500;old_locus_tag=IXO1104_03465;partial=true;pseudo=true;start_range=.,759631 NZ_CP047492.1 Protein Homology CDS 759631 760220 . + 0 ID=cds-IXO1104_RS03500;Parent=gene-IXO1104_RS03500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS03500;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,759631;transl_table=11 NZ_CP047492.1 RefSeq gene 760534 761769 . + . ID=gene-IXO1104_RS03505;Name=IXO1104_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03505;old_locus_tag=IXO1104_03470 NZ_CP047492.1 Protein Homology CDS 760534 761769 . + 0 ID=cds-WP_044756360.1;Parent=gene-IXO1104_RS03505;Dbxref=Genbank:WP_044756360.1;Name=WP_044756360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS03505;product=ISL3 family transposase;protein_id=WP_044756360.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 761777 761926 . - . ID=gene-IXO1104_RS03510;Name=IXO1104_RS03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03510;old_locus_tag=IXO1104_03475;partial=true;pseudo=true;start_range=.,761777 NZ_CP047492.1 Protein Homology CDS 761777 761926 . - 0 ID=cds-IXO1104_RS03510;Parent=gene-IXO1104_RS03510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157226.1;locus_tag=IXO1104_RS03510;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,761777;transl_table=11 NZ_CP047492.1 RefSeq gene 761975 763246 . - . ID=gene-IXO1104_RS03515;Name=IXO1104_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03515;old_locus_tag=IXO1104_03480 NZ_CP047492.1 Protein Homology CDS 761975 763246 . - 0 ID=cds-WP_027703991.1;Parent=gene-IXO1104_RS03515;Dbxref=Genbank:WP_027703991.1;Name=WP_027703991.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157227.1;locus_tag=IXO1104_RS03515;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_027703991.1;transl_table=11 NZ_CP047492.1 RefSeq gene 763454 765283 . + . ID=gene-IXO1104_RS03520;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=IXO1104_RS03520;old_locus_tag=IXO1104_03485 NZ_CP047492.1 Protein Homology CDS 763454 765283 . + 0 ID=cds-WP_011407585.1;Parent=gene-IXO1104_RS03520;Dbxref=Genbank:WP_011407585.1;Name=WP_011407585.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159863.1;locus_tag=IXO1104_RS03520;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_011407585.1;transl_table=11 NZ_CP047492.1 RefSeq gene 765665 766138 . + . ID=gene-IXO1104_RS03525;Name=IXO1104_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03525;old_locus_tag=IXO1104_03490 NZ_CP047492.1 Protein Homology CDS 765665 766138 . + 0 ID=cds-WP_011257638.1;Parent=gene-IXO1104_RS03525;Dbxref=Genbank:WP_011257638.1;Name=WP_011257638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506523.1;locus_tag=IXO1104_RS03525;product=hypothetical protein;protein_id=WP_011257638.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 766370 766921 . + . ID=gene-IXO1104_RS03530;Name=IXO1104_RS03530;end_range=766921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03530;old_locus_tag=IXO1104_03495;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 766370 766921 . + 0 ID=cds-IXO1104_RS03530;Parent=gene-IXO1104_RS03530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=766921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173703.1;locus_tag=IXO1104_RS03530;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 766978 767741 . + . ID=gene-IXO1104_RS03535;Name=IXO1104_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03535;old_locus_tag=IXO1104_03500 NZ_CP047492.1 Protein Homology CDS 766978 767293 . + 0 ID=cds-WP_094187736.1;Parent=gene-IXO1104_RS03535;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS03535;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 767293 767741 . + 2 ID=cds-WP_094187736.1;Parent=gene-IXO1104_RS03535;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS03535;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 RefSeq gene 767865 767941 . + . ID=gene-IXO1104_RS03540;Name=IXO1104_RS03540;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS03540;old_locus_tag=IXO1104_03505 NZ_CP047492.1 cmsearch ncRNA 767865 767941 . + . ID=rna-IXO1104_RS03540;Parent=gene-IXO1104_RS03540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03540;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 767865 767941 . + . ID=exon-IXO1104_RS03540-1;Parent=rna-IXO1104_RS03540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS03540;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 767992 768516 . - . ID=gene-IXO1104_RS03545;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03545;old_locus_tag=IXO1104_03510 NZ_CP047492.1 Protein Homology CDS 767992 768516 . - 0 ID=cds-WP_011407588.1;Parent=gene-IXO1104_RS03545;Dbxref=Genbank:WP_011407588.1;Name=WP_011407588.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849953.1;locus_tag=IXO1104_RS03545;product=lactoylglutathione lyase;protein_id=WP_011407588.1;transl_table=11 NZ_CP047492.1 RefSeq gene 768673 769779 . - . ID=gene-IXO1104_RS03550;Name=IXO1104_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03550;old_locus_tag=IXO1104_03515 NZ_CP047492.1 Protein Homology CDS 768673 769779 . - 0 ID=cds-WP_011257643.1;Parent=gene-IXO1104_RS03550;Dbxref=Genbank:WP_011257643.1;Name=WP_011257643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167647.1;locus_tag=IXO1104_RS03550;product=copper resistance protein B;protein_id=WP_011257643.1;transl_table=11 NZ_CP047492.1 RefSeq gene 769776 771605 . - . ID=gene-IXO1104_RS03555;Name=IXO1104_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03555;old_locus_tag=IXO1104_03520 NZ_CP047492.1 Protein Homology CDS 769776 771605 . - 0 ID=cds-WP_103057459.1;Parent=gene-IXO1104_RS03555;Dbxref=Genbank:WP_103057459.1;Name=WP_103057459.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507;gbkey=CDS;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091111.1;locus_tag=IXO1104_RS03555;product=copper resistance system multicopper oxidase;protein_id=WP_103057459.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 771692 772148 . - . ID=gene-IXO1104_RS03560;Name=IXO1104_RS03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03560;old_locus_tag=IXO1104_03525;pseudo=true NZ_CP047492.1 Protein Homology CDS 771692 772148 . - 0 ID=cds-IXO1104_RS03560;Parent=gene-IXO1104_RS03560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162684.1;locus_tag=IXO1104_RS03560;product=CopL family metal-binding regulatory protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 772244 773347 . + . ID=gene-IXO1104_RS03565;Name=IXO1104_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03565;old_locus_tag=IXO1104_03530 NZ_CP047492.1 Protein Homology CDS 772244 773347 . + 0 ID=cds-WP_011407590.1;Parent=gene-IXO1104_RS03565;Dbxref=Genbank:WP_011407590.1;Name=WP_011407590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304765.1;locus_tag=IXO1104_RS03565;product=PLP-dependent cysteine synthase family protein;protein_id=WP_011407590.1;transl_table=11 NZ_CP047492.1 RefSeq gene 773391 775415 . + . ID=gene-IXO1104_RS03570;Name=IXO1104_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03570;old_locus_tag=IXO1104_03535 NZ_CP047492.1 Protein Homology CDS 773391 775415 . + 0 ID=cds-WP_075239273.1;Parent=gene-IXO1104_RS03570;Dbxref=Genbank:WP_075239273.1;Name=WP_075239273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304766.1;locus_tag=IXO1104_RS03570;product=M3 family metallopeptidase;protein_id=WP_075239273.1;transl_table=11 NZ_CP047492.1 RefSeq gene 775589 776410 . + . ID=gene-IXO1104_RS03575;Name=IXO1104_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03575;old_locus_tag=IXO1104_03540 NZ_CP047492.1 Protein Homology CDS 775589 776410 . + 0 ID=cds-WP_033013277.1;Parent=gene-IXO1104_RS03575;Dbxref=Genbank:WP_033013277.1;Name=WP_033013277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504674.1;locus_tag=IXO1104_RS03575;product=hypothetical protein;protein_id=WP_033013277.1;transl_table=11 NZ_CP047492.1 RefSeq gene 776524 777732 . - . ID=gene-IXO1104_RS03580;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03580;old_locus_tag=IXO1104_03545 NZ_CP047492.1 Protein Homology CDS 776524 777732 . - 0 ID=cds-WP_011257649.1;Parent=gene-IXO1104_RS03580;Dbxref=Genbank:WP_011257649.1;Name=WP_011257649.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237990.1;locus_tag=IXO1104_RS03580;product=beta-ketoacyl-ACP synthase I;protein_id=WP_011257649.1;transl_table=11 NZ_CP047492.1 RefSeq gene 777732 778247 . - . ID=gene-IXO1104_RS03585;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03585;old_locus_tag=IXO1104_03550 NZ_CP047492.1 Protein Homology CDS 777732 778247 . - 0 ID=cds-WP_011407593.1;Parent=gene-IXO1104_RS03585;Dbxref=Genbank:WP_011407593.1;Name=WP_011407593.1;Ontology_term=GO:0019171;gbkey=CDS;gene=fabA;go_function=3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035827.1;locus_tag=IXO1104_RS03585;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=WP_011407593.1;transl_table=11 NZ_CP047492.1 RefSeq gene 778593 779672 . + . ID=gene-IXO1104_RS03590;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03590;old_locus_tag=IXO1104_03560 NZ_CP047492.1 Protein Homology CDS 778593 779672 . + 0 ID=cds-WP_044757112.1;Parent=gene-IXO1104_RS03590;Dbxref=Genbank:WP_044757112.1;Name=WP_044757112.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157240.1;locus_tag=IXO1104_RS03590;product=DNA polymerase IV;protein_id=WP_044757112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 779814 780464 . + . ID=gene-IXO1104_RS03595;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=IXO1104_RS03595;old_locus_tag=IXO1104_03565 NZ_CP047492.1 Protein Homology CDS 779814 780464 . + 0 ID=cds-WP_011407595.1;Parent=gene-IXO1104_RS03595;Dbxref=Genbank:WP_011407595.1;Name=WP_011407595.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0008152,GO:0009853,GO:0043094,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=metabolic process|0008152||IEA,photorespiration|0009853||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348635.1;locus_tag=IXO1104_RS03595;product=phosphoglycolate phosphatase;protein_id=WP_011407595.1;transl_table=11 NZ_CP047492.1 RefSeq gene 780776 781174 . - . ID=gene-IXO1104_RS03600;Name=IXO1104_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03600;old_locus_tag=IXO1104_03570 NZ_CP047492.1 Protein Homology CDS 780776 781174 . - 0 ID=cds-WP_011257653.1;Parent=gene-IXO1104_RS03600;Dbxref=Genbank:WP_011257653.1;Name=WP_011257653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157242.1;locus_tag=IXO1104_RS03600;product=TfoX/Sxy family protein;protein_id=WP_011257653.1;transl_table=11 NZ_CP047492.1 RefSeq gene 781171 781653 . - . ID=gene-IXO1104_RS03605;Name=IXO1104_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03605;old_locus_tag=IXO1104_03575 NZ_CP047492.1 Protein Homology CDS 781171 781653 . - 0 ID=cds-WP_011407596.1;Parent=gene-IXO1104_RS03605;Dbxref=Genbank:WP_011407596.1;Name=WP_011407596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407596.1;locus_tag=IXO1104_RS03605;product=GAF domain-containing protein;protein_id=WP_011407596.1;transl_table=11 NZ_CP047492.1 RefSeq gene 781978 782652 . + . ID=gene-IXO1104_RS03610;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=IXO1104_RS03610;old_locus_tag=IXO1104_03580 NZ_CP047492.1 Protein Homology CDS 781978 782652 . + 0 ID=cds-WP_011407597.1;Parent=gene-IXO1104_RS03610;Dbxref=Genbank:WP_011407597.1;Name=WP_011407597.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157245.1;locus_tag=IXO1104_RS03610;product=dethiobiotin synthase;protein_id=WP_011407597.1;transl_table=11 NZ_CP047492.1 RefSeq gene 782767 783102 . - . ID=gene-IXO1104_RS03615;Name=IXO1104_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03615;old_locus_tag=IXO1104_03585 NZ_CP047492.1 Protein Homology CDS 782767 783102 . - 0 ID=cds-WP_011407598.1;Parent=gene-IXO1104_RS03615;Dbxref=Genbank:WP_011407598.1;Name=WP_011407598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158777.1;locus_tag=IXO1104_RS03615;product=phasin family protein;protein_id=WP_011407598.1;transl_table=11 NZ_CP047492.1 RefSeq gene 783295 783648 . - . ID=gene-IXO1104_RS03620;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=IXO1104_RS03620;old_locus_tag=IXO1104_03590 NZ_CP047492.1 Protein Homology CDS 783295 783648 . - 0 ID=cds-WP_027703598.1;Parent=gene-IXO1104_RS03620;Dbxref=Genbank:WP_027703598.1;Name=WP_027703598.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900974.1;locus_tag=IXO1104_RS03620;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_027703598.1;transl_table=11 NZ_CP047492.1 RefSeq gene 784061 785443 . - . ID=gene-IXO1104_RS03625;Name=IXO1104_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03625;old_locus_tag=IXO1104_03595 NZ_CP047492.1 Protein Homology CDS 784061 785443 . - 0 ID=cds-WP_011407600.1;Parent=gene-IXO1104_RS03625;Dbxref=Genbank:WP_011407600.1;Name=WP_011407600.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446112.1;locus_tag=IXO1104_RS03625;product=DEAD/DEAH box helicase;protein_id=WP_011407600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 785754 786812 . + . ID=gene-IXO1104_RS03630;Name=IXO1104_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03630;old_locus_tag=IXO1104_03605 NZ_CP047492.1 Protein Homology CDS 785754 786812 . + 0 ID=cds-WP_027703597.1;Parent=gene-IXO1104_RS03630;Dbxref=Genbank:WP_027703597.1;Name=WP_027703597.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160204.1;locus_tag=IXO1104_RS03630;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_027703597.1;transl_table=11 NZ_CP047492.1 RefSeq gene 786856 787518 . + . ID=gene-IXO1104_RS03635;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03635;old_locus_tag=IXO1104_03610 NZ_CP047492.1 Protein Homology CDS 786856 787518 . + 0 ID=cds-WP_012446110.1;Parent=gene-IXO1104_RS03635;Dbxref=Genbank:WP_012446110.1;Name=WP_012446110.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301779.1;locus_tag=IXO1104_RS03635;product=maleylacetoacetate isomerase;protein_id=WP_012446110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 787857 788990 . - . ID=gene-IXO1104_RS03640;Name=IXO1104_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03640;old_locus_tag=IXO1104_03615 NZ_CP047492.1 Protein Homology CDS 787857 788990 . - 0 ID=cds-WP_011407601.1;Parent=gene-IXO1104_RS03640;Dbxref=Genbank:WP_011407601.1;Name=WP_011407601.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914752.1;locus_tag=IXO1104_RS03640;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_011407601.1;transl_table=11 NZ_CP047492.1 RefSeq gene 789089 789472 . + . ID=gene-IXO1104_RS03645;Name=IXO1104_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03645;old_locus_tag=IXO1104_03620 NZ_CP047492.1 Protein Homology CDS 789089 789472 . + 0 ID=cds-WP_033003790.1;Parent=gene-IXO1104_RS03645;Dbxref=Genbank:WP_033003790.1;Name=WP_033003790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914753.1;locus_tag=IXO1104_RS03645;product=DUF4398 domain-containing protein;protein_id=WP_033003790.1;transl_table=11 NZ_CP047492.1 RefSeq gene 789469 790359 . + . ID=gene-IXO1104_RS03650;Name=IXO1104_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03650;old_locus_tag=IXO1104_03625 NZ_CP047492.1 Protein Homology CDS 789469 790359 . + 0 ID=cds-WP_011257662.1;Parent=gene-IXO1104_RS03650;Dbxref=Genbank:WP_011257662.1;Name=WP_011257662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161845.1;locus_tag=IXO1104_RS03650;product=membrane protein;protein_id=WP_011257662.1;transl_table=11 NZ_CP047492.1 RefSeq gene 790701 790919 . + . ID=gene-IXO1104_RS03655;Name=IXO1104_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03655;old_locus_tag=IXO1104_03630 NZ_CP047492.1 Protein Homology CDS 790701 790919 . + 0 ID=cds-WP_003484103.1;Parent=gene-IXO1104_RS03655;Dbxref=Genbank:WP_003484103.1;Name=WP_003484103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=IXO1104_RS03655;product=YdcH family protein;protein_id=WP_003484103.1;transl_table=11 NZ_CP047492.1 RefSeq gene 791161 792531 . + . ID=gene-IXO1104_RS03660;Name=IXO1104_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03660;old_locus_tag=IXO1104_03635 NZ_CP047492.1 Protein Homology CDS 791161 792531 . + 0 ID=cds-WP_075239874.1;Parent=gene-IXO1104_RS03660;Dbxref=Genbank:WP_075239874.1;Name=WP_075239874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=IXO1104_RS03660;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_075239874.1;transl_table=11 NZ_CP047492.1 RefSeq gene 792622 793815 . + . ID=gene-IXO1104_RS03665;Name=IXO1104_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03665;old_locus_tag=IXO1104_03640 NZ_CP047492.1 Protein Homology CDS 792622 793815 . + 0 ID=cds-WP_075240432.1;Parent=gene-IXO1104_RS03665;Dbxref=Genbank:WP_075240432.1;Name=WP_075240432.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301785.1;locus_tag=IXO1104_RS03665;product=cystathionine gamma-synthase;protein_id=WP_075240432.1;transl_table=11 NZ_CP047492.1 RefSeq gene 793934 794662 . + . ID=gene-IXO1104_RS03670;Name=IXO1104_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03670;old_locus_tag=IXO1104_03645 NZ_CP047492.1 Protein Homology CDS 793934 794662 . + 0 ID=cds-WP_011407604.1;Parent=gene-IXO1104_RS03670;Dbxref=Genbank:WP_011407604.1;Name=WP_011407604.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446105.1;locus_tag=IXO1104_RS03670;product=FkbM family methyltransferase;protein_id=WP_011407604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 794697 795773 . + . ID=gene-IXO1104_RS03675;Name=IXO1104_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03675;old_locus_tag=IXO1104_03650 NZ_CP047492.1 Protein Homology CDS 794697 795773 . + 0 ID=cds-WP_011407605.1;Parent=gene-IXO1104_RS03675;Dbxref=Genbank:WP_011407605.1;Name=WP_011407605.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407605.1;locus_tag=IXO1104_RS03675;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011407605.1;transl_table=11 NZ_CP047492.1 RefSeq gene 795770 797731 . + . ID=gene-IXO1104_RS03680;Name=IXO1104_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03680 NZ_CP047492.1 Protein Homology CDS 795770 797731 . + 0 ID=cds-WP_228329681.1;Parent=gene-IXO1104_RS03680;Dbxref=Genbank:WP_228329681.1;Name=WP_228329681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015446795.1;locus_tag=IXO1104_RS03680;product=glycosyltransferase;protein_id=WP_228329681.1;transl_table=11 NZ_CP047492.1 RefSeq gene 797752 798042 . + . ID=gene-IXO1104_RS03685;Name=IXO1104_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03685;old_locus_tag=IXO1104_03660 NZ_CP047492.1 Protein Homology CDS 797752 798042 . + 0 ID=cds-WP_024744691.1;Parent=gene-IXO1104_RS03685;Dbxref=Genbank:WP_024744691.1;Name=WP_024744691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015446796.1;locus_tag=IXO1104_RS03685;product=hypothetical protein;protein_id=WP_024744691.1;transl_table=11 NZ_CP047492.1 RefSeq gene 798042 799196 . + . ID=gene-IXO1104_RS03690;Name=IXO1104_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03690;old_locus_tag=IXO1104_03665 NZ_CP047492.1 Protein Homology CDS 798042 799196 . + 0 ID=cds-WP_228329682.1;Parent=gene-IXO1104_RS03690;Dbxref=Genbank:WP_228329682.1;Name=WP_228329682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257668.1;locus_tag=IXO1104_RS03690;product=glycosyltransferase;protein_id=WP_228329682.1;transl_table=11 NZ_CP047492.1 RefSeq gene 799202 800254 . + . ID=gene-IXO1104_RS03695;Name=IXO1104_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03695;old_locus_tag=IXO1104_03670 NZ_CP047492.1 Protein Homology CDS 799202 800254 . + 0 ID=cds-WP_011257669.1;Parent=gene-IXO1104_RS03695;Dbxref=Genbank:WP_011257669.1;Name=WP_011257669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257669.1;locus_tag=IXO1104_RS03695;product=acyltransferase;protein_id=WP_011257669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 800282 801238 . - . ID=gene-IXO1104_RS03700;Name=IXO1104_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03700;old_locus_tag=IXO1104_03675 NZ_CP047492.1 Protein Homology CDS 800282 801238 . - 0 ID=cds-WP_011407237.1-2;Parent=gene-IXO1104_RS03700;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS03700;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 801400 802719 . + . ID=gene-IXO1104_RS03705;Name=IXO1104_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03705;old_locus_tag=IXO1104_03680 NZ_CP047492.1 Protein Homology CDS 801400 802719 . + 0 ID=cds-WP_263117819.1;Parent=gene-IXO1104_RS03705;Dbxref=Genbank:WP_263117819.1;Name=WP_263117819.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03705;product=IS701 family transposase;protein_id=WP_263117819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 803035 804219 . + . ID=gene-IXO1104_RS03710;Name=IXO1104_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03710;old_locus_tag=IXO1104_03685 NZ_CP047492.1 Protein Homology CDS 803035 804219 . + 0 ID=cds-WP_011408522.1;Parent=gene-IXO1104_RS03710;Dbxref=Genbank:WP_011408522.1;Name=WP_011408522.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS03710;product=IS256 family transposase;protein_id=WP_011408522.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 804337 804639 . + . ID=gene-IXO1104_RS03715;Name=IXO1104_RS03715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03715;old_locus_tag=IXO1104_03690;partial=true;pseudo=true;start_range=.,804337 NZ_CP047492.1 Protein Homology CDS 804337 804639 . + 0 ID=cds-IXO1104_RS03715;Parent=gene-IXO1104_RS03715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS03715;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,804337;transl_table=11 NZ_CP047492.1 RefSeq gene 804749 806062 . - . ID=gene-IXO1104_RS03720;Name=IXO1104_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03720;old_locus_tag=IXO1104_03695 NZ_CP047492.1 Protein Homology CDS 804749 806062 . - 0 ID=cds-WP_011407610.1;Parent=gene-IXO1104_RS03720;Dbxref=Genbank:WP_011407610.1;Name=WP_011407610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407610.1;locus_tag=IXO1104_RS03720;product=ABC transporter ATP-binding protein;protein_id=WP_011407610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 806052 806870 . - . ID=gene-IXO1104_RS03725;Name=IXO1104_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03725;old_locus_tag=IXO1104_03700 NZ_CP047492.1 Protein Homology CDS 806052 806870 . - 0 ID=cds-WP_011407611.1;Parent=gene-IXO1104_RS03725;Dbxref=Genbank:WP_011407611.1;Name=WP_011407611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446100.1;locus_tag=IXO1104_RS03725;product=ABC transporter permease;protein_id=WP_011407611.1;transl_table=11 NZ_CP047492.1 RefSeq gene 807093 808034 . - . ID=gene-IXO1104_RS03730;Name=IXO1104_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03730;old_locus_tag=IXO1104_03705 NZ_CP047492.1 Protein Homology CDS 807093 808034 . - 0 ID=cds-WP_011257674.1;Parent=gene-IXO1104_RS03730;Dbxref=Genbank:WP_011257674.1;Name=WP_011257674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257674.1;locus_tag=IXO1104_RS03730;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_011257674.1;transl_table=11 NZ_CP047492.1 RefSeq gene 808034 808780 . - . ID=gene-IXO1104_RS03735;Name=IXO1104_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03735;old_locus_tag=IXO1104_03710 NZ_CP047492.1 Protein Homology CDS 808034 808780 . - 0 ID=cds-WP_011257675.1;Parent=gene-IXO1104_RS03735;Dbxref=Genbank:WP_011257675.1;Name=WP_011257675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182580.1;locus_tag=IXO1104_RS03735;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_011257675.1;transl_table=11 NZ_CP047492.1 RefSeq gene 809006 810061 . + . ID=gene-IXO1104_RS03740;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=IXO1104_RS03740;old_locus_tag=IXO1104_03715 NZ_CP047492.1 Protein Homology CDS 809006 810061 . + 0 ID=cds-WP_011407612.1;Parent=gene-IXO1104_RS03740;Dbxref=Genbank:WP_011407612.1;Name=WP_011407612.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407612.1;locus_tag=IXO1104_RS03740;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_011407612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 810117 811004 . + . ID=gene-IXO1104_RS03745;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03745;old_locus_tag=IXO1104_03720 NZ_CP047492.1 Protein Homology CDS 810117 811004 . + 0 ID=cds-WP_011407613.1;Parent=gene-IXO1104_RS03745;Dbxref=Genbank:WP_011407613.1;Name=WP_011407613.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=IXO1104_RS03745;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_011407613.1;transl_table=11 NZ_CP047492.1 RefSeq gene 811001 811558 . + . ID=gene-IXO1104_RS03750;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=IXO1104_RS03750;old_locus_tag=IXO1104_03725 NZ_CP047492.1 Protein Homology CDS 811001 811558 . + 0 ID=cds-WP_011407614.1;Parent=gene-IXO1104_RS03750;Dbxref=Genbank:WP_011407614.1;Name=WP_011407614.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377788.1;locus_tag=IXO1104_RS03750;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_011407614.1;transl_table=11 NZ_CP047492.1 RefSeq gene 811555 812463 . + . ID=gene-IXO1104_RS03755;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=IXO1104_RS03755;old_locus_tag=IXO1104_03730 NZ_CP047492.1 Protein Homology CDS 811555 812463 . + 0 ID=cds-WP_011407615.1;Parent=gene-IXO1104_RS03755;Dbxref=Genbank:WP_011407615.1;Name=WP_011407615.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446096.1;locus_tag=IXO1104_RS03755;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_011407615.1;transl_table=11 NZ_CP047492.1 RefSeq gene 812580 813983 . - . ID=gene-IXO1104_RS03760;Name=IXO1104_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03760;old_locus_tag=IXO1104_03735 NZ_CP047492.1 Protein Homology CDS 812580 813983 . - 0 ID=cds-WP_011257680.1;Parent=gene-IXO1104_RS03760;Dbxref=Genbank:WP_011257680.1;Name=WP_011257680.1;Ontology_term=GO:0009103,GO:0004476,GO:0008905;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,mannose-phosphate guanylyltransferase activity|0008905||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850199.1;locus_tag=IXO1104_RS03760;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_011257680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 814031 815377 . - . ID=gene-IXO1104_RS03765;Name=IXO1104_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03765;old_locus_tag=IXO1104_03740 NZ_CP047492.1 Protein Homology CDS 814031 815377 . - 0 ID=cds-WP_011407616.1;Parent=gene-IXO1104_RS03765;Dbxref=Genbank:WP_011407616.1;Name=WP_011407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303601.1;locus_tag=IXO1104_RS03765;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_011407616.1;transl_table=11 NZ_CP047492.1 RefSeq gene 815511 816242 . + . ID=gene-IXO1104_RS03770;Name=IXO1104_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03770;old_locus_tag=IXO1104_03745 NZ_CP047492.1 Protein Homology CDS 815511 816242 . + 0 ID=cds-WP_011407617.1;Parent=gene-IXO1104_RS03770;Dbxref=Genbank:WP_011407617.1;Name=WP_011407617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484175.1;locus_tag=IXO1104_RS03770;product=CoA transferase subunit A;protein_id=WP_011407617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 816242 816871 . + . ID=gene-IXO1104_RS03775;Name=IXO1104_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03775;old_locus_tag=IXO1104_03750 NZ_CP047492.1 Protein Homology CDS 816242 816871 . + 0 ID=cds-WP_012446094.1;Parent=gene-IXO1104_RS03775;Dbxref=Genbank:WP_012446094.1;Name=WP_012446094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158247.1;locus_tag=IXO1104_RS03775;product=CoA transferase subunit B;protein_id=WP_012446094.1;transl_table=11 NZ_CP047492.1 RefSeq gene 816929 819016 . - . ID=gene-IXO1104_RS03780;Name=IXO1104_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03780;old_locus_tag=IXO1104_03755 NZ_CP047492.1 Protein Homology CDS 816929 819016 . - 0 ID=cds-WP_011407618.1;Parent=gene-IXO1104_RS03780;Dbxref=Genbank:WP_011407618.1;Name=WP_011407618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158246.1;locus_tag=IXO1104_RS03780;product=glycoside hydrolase family 99-like domain-containing protein;protein_id=WP_011407618.1;transl_table=11 NZ_CP047492.1 RefSeq gene 819013 820662 . - . ID=gene-IXO1104_RS03785;Name=IXO1104_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03785;old_locus_tag=IXO1104_03760 NZ_CP047492.1 Protein Homology CDS 819013 820662 . - 0 ID=cds-WP_012446093.1;Parent=gene-IXO1104_RS03785;Dbxref=Genbank:WP_012446093.1;Name=WP_012446093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348604.1;locus_tag=IXO1104_RS03785;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_012446093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 820778 821386 . + . ID=gene-IXO1104_RS03790;Name=IXO1104_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03790;old_locus_tag=IXO1104_03765 NZ_CP047492.1 Protein Homology CDS 820778 821386 . + 0 ID=cds-WP_011257686.1;Parent=gene-IXO1104_RS03790;Dbxref=Genbank:WP_011257686.1;Name=WP_011257686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257686.1;locus_tag=IXO1104_RS03790;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_011257686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 821937 822581 . - . ID=gene-IXO1104_RS03795;Name=IXO1104_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03795;old_locus_tag=IXO1104_03770 NZ_CP047492.1 Protein Homology CDS 821937 822581 . - 0 ID=cds-WP_011257687.1;Parent=gene-IXO1104_RS03795;Dbxref=Genbank:WP_011257687.1;Name=WP_011257687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257687.1;locus_tag=IXO1104_RS03795;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_011257687.1;transl_table=11 NZ_CP047492.1 RefSeq gene 822578 823504 . - . ID=gene-IXO1104_RS03800;Name=IXO1104_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03800;old_locus_tag=IXO1104_03775 NZ_CP047492.1 Protein Homology CDS 822578 823504 . - 0 ID=cds-WP_011257688.1;Parent=gene-IXO1104_RS03800;Dbxref=Genbank:WP_011257688.1;Name=WP_011257688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903957.1;locus_tag=IXO1104_RS03800;product=MCE family protein;protein_id=WP_011257688.1;transl_table=11 NZ_CP047492.1 RefSeq gene 823507 824349 . - . ID=gene-IXO1104_RS03805;Name=IXO1104_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03805;old_locus_tag=IXO1104_03780 NZ_CP047492.1 Protein Homology CDS 823507 824349 . - 0 ID=cds-WP_011257689.1;Parent=gene-IXO1104_RS03805;Dbxref=Genbank:WP_011257689.1;Name=WP_011257689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969506.1;locus_tag=IXO1104_RS03805;product=ABC transporter ATP-binding protein;protein_id=WP_011257689.1;transl_table=11 NZ_CP047492.1 RefSeq gene 824435 825547 . - . ID=gene-IXO1104_RS03810;Name=IXO1104_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03810;old_locus_tag=IXO1104_03785 NZ_CP047492.1 Protein Homology CDS 824435 825547 . - 0 ID=cds-WP_011407620.1;Parent=gene-IXO1104_RS03810;Dbxref=Genbank:WP_011407620.1;Name=WP_011407620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813964.1;locus_tag=IXO1104_RS03810;product=ABC transporter permease;protein_id=WP_011407620.1;transl_table=11 NZ_CP047492.1 RefSeq gene 825717 826976 . + . ID=gene-IXO1104_RS03815;Name=IXO1104_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03815;old_locus_tag=IXO1104_03790 NZ_CP047492.1 Protein Homology CDS 825717 826976 . + 0 ID=cds-WP_011257691.1;Parent=gene-IXO1104_RS03815;Dbxref=Genbank:WP_011257691.1;Name=WP_011257691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506577.1;locus_tag=IXO1104_RS03815;product=threonine/serine exporter;protein_id=WP_011257691.1;transl_table=11 NZ_CP047492.1 RefSeq gene 827038 827499 . - . ID=gene-IXO1104_RS03820;Name=IXO1104_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03820;old_locus_tag=IXO1104_03795 NZ_CP047492.1 Protein Homology CDS 827038 827499 . - 0 ID=cds-WP_011407621.1;Parent=gene-IXO1104_RS03820;Dbxref=Genbank:WP_011407621.1;Name=WP_011407621.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407621.1;locus_tag=IXO1104_RS03820;product=H-NS histone family protein;protein_id=WP_011407621.1;transl_table=11 NZ_CP047492.1 RefSeq gene 827642 829336 . - . ID=gene-IXO1104_RS03825;Name=IXO1104_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03825;old_locus_tag=IXO1104_03800 NZ_CP047492.1 Protein Homology CDS 827642 829336 . - 0 ID=cds-WP_011257693.1;Parent=gene-IXO1104_RS03825;Dbxref=Genbank:WP_011257693.1;Name=WP_011257693.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902894.1;locus_tag=IXO1104_RS03825;product=proline--tRNA ligase;protein_id=WP_011257693.1;transl_table=11 NZ_CP047492.1 RefSeq gene 829448 829852 . - . ID=gene-IXO1104_RS03830;Name=IXO1104_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03830;old_locus_tag=IXO1104_03805 NZ_CP047492.1 Protein Homology CDS 829448 829852 . - 0 ID=cds-WP_012446090.1;Parent=gene-IXO1104_RS03830;Dbxref=Genbank:WP_012446090.1;Name=WP_012446090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446090.1;locus_tag=IXO1104_RS03830;product=DUF4124 domain-containing protein;protein_id=WP_012446090.1;transl_table=11 NZ_CP047492.1 RefSeq gene 829984 830757 . + . ID=gene-IXO1104_RS03835;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=IXO1104_RS03835;old_locus_tag=IXO1104_03810 NZ_CP047492.1 Protein Homology CDS 829984 830757 . + 0 ID=cds-WP_011407623.1;Parent=gene-IXO1104_RS03835;Dbxref=Genbank:WP_011407623.1;Name=WP_011407623.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991773.1;locus_tag=IXO1104_RS03835;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_011407623.1;transl_table=11 NZ_CP047492.1 RefSeq gene 830792 831235 . + . ID=gene-IXO1104_RS03840;Name=IXO1104_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03840;old_locus_tag=IXO1104_03815 NZ_CP047492.1 Protein Homology CDS 830792 831235 . + 0 ID=cds-WP_171970793.1;Parent=gene-IXO1104_RS03840;Dbxref=Genbank:WP_171970793.1;Name=WP_171970793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913473.1;locus_tag=IXO1104_RS03840;product=alanine acetyltransferase;protein_id=WP_171970793.1;transl_table=11 NZ_CP047492.1 RefSeq gene 831232 831714 . + . ID=gene-IXO1104_RS03845;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=IXO1104_RS03845;old_locus_tag=IXO1104_03820 NZ_CP047492.1 Protein Homology CDS 831232 831714 . + 0 ID=cds-WP_075240696.1;Parent=gene-IXO1104_RS03845;Dbxref=Genbank:WP_075240696.1;Name=WP_075240696.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768432.1;locus_tag=IXO1104_RS03845;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_075240696.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 832210 832377 . + . ID=gene-IXO1104_RS03850;Name=IXO1104_RS03850;end_range=832377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03850;old_locus_tag=IXO1104_03825;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 832210 832377 . + 0 ID=cds-IXO1104_RS03850;Parent=gene-IXO1104_RS03850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=832377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS03850;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 832495 833709 . + . ID=gene-IXO1104_RS03855;Name=IXO1104_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03855;old_locus_tag=IXO1104_03830 NZ_CP047492.1 Protein Homology CDS 832495 833709 . + 0 ID=cds-WP_011407913.1-3;Parent=gene-IXO1104_RS03855;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS03855;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 833729 834952 . + . ID=gene-IXO1104_RS03860;Name=IXO1104_RS03860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03860;old_locus_tag=IXO1104_03835;partial=true;pseudo=true;start_range=.,833729 NZ_CP047492.1 Protein Homology CDS 833729 834952 . + 0 ID=cds-IXO1104_RS03860;Parent=gene-IXO1104_RS03860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03860;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,833729;transl_table=11 NZ_CP047492.1 RefSeq gene 835165 836133 . - . ID=gene-IXO1104_RS03865;Name=IXO1104_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03865;old_locus_tag=IXO1104_03840 NZ_CP047492.1 Protein Homology CDS 835165 836133 . - 0 ID=cds-WP_011258802.1-2;Parent=gene-IXO1104_RS03865;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS03865;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 836283 837602 . - . ID=gene-IXO1104_RS03870;Name=IXO1104_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03870;old_locus_tag=IXO1104_03845 NZ_CP047492.1 Protein Homology CDS 836283 837602 . - 0 ID=cds-WP_263117824.1;Parent=gene-IXO1104_RS03870;Dbxref=Genbank:WP_263117824.1;Name=WP_263117824.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03870;product=IS701 family transposase;protein_id=WP_263117824.1;transl_table=11 NZ_CP047492.1 RefSeq gene 837907 839880 . + . ID=gene-IXO1104_RS03875;Name=IXO1104_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03875;old_locus_tag=IXO1104_03850 NZ_CP047492.1 Protein Homology CDS 837907 839880 . + 0 ID=cds-WP_027704044.1;Parent=gene-IXO1104_RS03875;Dbxref=Genbank:WP_027704044.1;Name=WP_027704044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117455.1;locus_tag=IXO1104_RS03875;product=transglycosylase SLT domain-containing protein;protein_id=WP_027704044.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 840147 841281 . - . ID=gene-IXO1104_RS03880;Name=IXO1104_RS03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03880;old_locus_tag=IXO1104_03855;pseudo=true NZ_CP047492.1 Protein Homology CDS 840147 841281 . - 0 ID=cds-IXO1104_RS03880;Parent=gene-IXO1104_RS03880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159791.1;locus_tag=IXO1104_RS03880;product=pectate lyase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 841507 842826 . - . ID=gene-IXO1104_RS03885;Name=IXO1104_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03885;old_locus_tag=IXO1104_03860 NZ_CP047492.1 Protein Homology CDS 841507 842826 . - 0 ID=cds-WP_164994101.1;Parent=gene-IXO1104_RS03885;Dbxref=Genbank:WP_164994101.1;Name=WP_164994101.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03885;product=IS701 family transposase;protein_id=WP_164994101.1;transl_table=11 NZ_CP047492.1 RefSeq gene 842963 843931 . + . ID=gene-IXO1104_RS03890;Name=IXO1104_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03890;old_locus_tag=IXO1104_03865 NZ_CP047492.1 Protein Homology CDS 842963 843931 . + 0 ID=cds-WP_011258802.1-3;Parent=gene-IXO1104_RS03890;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS03890;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 844144 845463 . - . ID=gene-IXO1104_RS03895;Name=IXO1104_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03895;old_locus_tag=IXO1104_03870 NZ_CP047492.1 Protein Homology CDS 844144 845463 . - 0 ID=cds-WP_117231489.1;Parent=gene-IXO1104_RS03895;Dbxref=Genbank:WP_117231489.1;Name=WP_117231489.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS03895;product=IS701 family transposase;protein_id=WP_117231489.1;transl_table=11 NZ_CP047492.1 RefSeq gene 845514 845825 . - . ID=gene-IXO1104_RS03900;Name=IXO1104_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03900;old_locus_tag=IXO1104_03875 NZ_CP047492.1 Protein Homology CDS 845514 845825 . - 0 ID=cds-WP_229002800.1;Parent=gene-IXO1104_RS03900;Dbxref=Genbank:WP_229002800.1;Name=WP_229002800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019846.2;locus_tag=IXO1104_RS03900;product=methyltransferase domain-containing protein;protein_id=WP_229002800.1;transl_table=11 NZ_CP047492.1 RefSeq gene 846014 847056 . - . ID=gene-IXO1104_RS03905;Name=IXO1104_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03905;old_locus_tag=IXO1104_03880 NZ_CP047492.1 Protein Homology CDS 846861 847056 . - 0 ID=cds-WP_229002797.1;Parent=gene-IXO1104_RS03905;Dbxref=Genbank:WP_229002797.1;Name=WP_229002797.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS03905;product=IS3 family transposase;protein_id=WP_229002797.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 846014 846861 . - 2 ID=cds-WP_229002797.1;Parent=gene-IXO1104_RS03905;Dbxref=Genbank:WP_229002797.1;Name=WP_229002797.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS03905;product=IS3 family transposase;protein_id=WP_229002797.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 847175 847501 . - . ID=gene-IXO1104_RS03910;Name=IXO1104_RS03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03910;old_locus_tag=IXO1104_03885;partial=true;pseudo=true;start_range=.,847175 NZ_CP047492.1 Protein Homology CDS 847175 847501 . - 0 ID=cds-IXO1104_RS03910;Parent=gene-IXO1104_RS03910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS03910;partial=true;product=transposase;pseudo=true;start_range=.,847175;transl_table=11 NZ_CP047492.1 RefSeq gene 847743 847922 . - . ID=gene-IXO1104_RS03915;Name=IXO1104_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03915 NZ_CP047492.1 Protein Homology CDS 847743 847922 . - 0 ID=cds-WP_012446080.1;Parent=gene-IXO1104_RS03915;Dbxref=Genbank:WP_012446080.1;Name=WP_012446080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016107.2;locus_tag=IXO1104_RS03915;product=hypothetical protein;protein_id=WP_012446080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 848053 850995 . - . ID=gene-IXO1104_RS03920;Name=IXO1104_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03920;old_locus_tag=IXO1104_03895 NZ_CP047492.1 Protein Homology CDS 848053 850995 . - 0 ID=cds-WP_011257710.1;Parent=gene-IXO1104_RS03920;Dbxref=Genbank:WP_011257710.1;Name=WP_011257710.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159789.1;locus_tag=IXO1104_RS03920;product=valine--tRNA ligase;protein_id=WP_011257710.1;transl_table=11 NZ_CP047492.1 RefSeq gene 851203 851628 . - . ID=gene-IXO1104_RS03925;Name=IXO1104_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03925;old_locus_tag=IXO1104_03900 NZ_CP047492.1 Protein Homology CDS 851203 851628 . - 0 ID=cds-WP_011257711.1;Parent=gene-IXO1104_RS03925;Dbxref=Genbank:WP_011257711.1;Name=WP_011257711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902887.1;locus_tag=IXO1104_RS03925;product=DNA polymerase III subunit chi;protein_id=WP_011257711.1;transl_table=11 NZ_CP047492.1 RefSeq gene 851669 851974 . - . ID=gene-IXO1104_RS03930;Name=IXO1104_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03930;old_locus_tag=IXO1104_03905 NZ_CP047492.1 Protein Homology CDS 851669 851974 . - 0 ID=cds-WP_011257712.1;Parent=gene-IXO1104_RS03930;Dbxref=Genbank:WP_011257712.1;Name=WP_011257712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257712.1;locus_tag=IXO1104_RS03930;product=hypothetical protein;protein_id=WP_011257712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 851974 853446 . - . ID=gene-IXO1104_RS03935;Name=IXO1104_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03935;old_locus_tag=IXO1104_03910 NZ_CP047492.1 Protein Homology CDS 851974 853446 . - 0 ID=cds-WP_011257713.1;Parent=gene-IXO1104_RS03935;Dbxref=Genbank:WP_011257713.1;Name=WP_011257713.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257713.1;locus_tag=IXO1104_RS03935;product=leucyl aminopeptidase;protein_id=WP_011257713.1;transl_table=11 NZ_CP047492.1 RefSeq gene 853554 854636 . + . ID=gene-IXO1104_RS03940;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=IXO1104_RS03940;old_locus_tag=IXO1104_03915 NZ_CP047492.1 Protein Homology CDS 853554 854636 . + 0 ID=cds-WP_011407634.1;Parent=gene-IXO1104_RS03940;Dbxref=Genbank:WP_011407634.1;Name=WP_011407634.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052356.1;locus_tag=IXO1104_RS03940;product=LPS export ABC transporter permease LptF;protein_id=WP_011407634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 854633 855739 . + . ID=gene-IXO1104_RS03945;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=IXO1104_RS03945;old_locus_tag=IXO1104_03920 NZ_CP047492.1 Protein Homology CDS 854633 855739 . + 0 ID=cds-WP_011407635.1;Parent=gene-IXO1104_RS03945;Dbxref=Genbank:WP_011407635.1;Name=WP_011407635.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964177.1;locus_tag=IXO1104_RS03945;product=LPS export ABC transporter permease LptG;protein_id=WP_011407635.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 855744 856043 . + . ID=gene-IXO1104_RS03950;Name=IXO1104_RS03950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03950;old_locus_tag=IXO1104_03925;pseudo=true NZ_CP047492.1 Protein Homology CDS 855744 856043 . + 0 ID=cds-IXO1104_RS03950;Parent=gene-IXO1104_RS03950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091062.1;locus_tag=IXO1104_RS03950;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 856154 856621 . - . ID=gene-IXO1104_RS03955;Name=IXO1104_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03955;old_locus_tag=IXO1104_03930 NZ_CP047492.1 Protein Homology CDS 856154 856621 . - 0 ID=cds-WP_011257716.1;Parent=gene-IXO1104_RS03955;Dbxref=Genbank:WP_011257716.1;Name=WP_011257716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913488.1;locus_tag=IXO1104_RS03955;product=RDD family protein;protein_id=WP_011257716.1;transl_table=11 NZ_CP047492.1 RefSeq gene 857048 858019 . + . ID=gene-IXO1104_RS03960;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=IXO1104_RS03960;old_locus_tag=IXO1104_03935 NZ_CP047492.1 Protein Homology CDS 857048 858019 . + 0 ID=cds-WP_011257717.1;Parent=gene-IXO1104_RS03960;Dbxref=Genbank:WP_011257717.1;Name=WP_011257717.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932805.1;locus_tag=IXO1104_RS03960;product=site-specific tyrosine recombinase XerD;protein_id=WP_011257717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 858471 859268 . + . ID=gene-IXO1104_RS03965;Name=IXO1104_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03965;old_locus_tag=IXO1104_03940 NZ_CP047492.1 Protein Homology CDS 858471 859268 . + 0 ID=cds-WP_011257718.1;Parent=gene-IXO1104_RS03965;Dbxref=Genbank:WP_011257718.1;Name=WP_011257718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490215.1;locus_tag=IXO1104_RS03965;product=DsbC family protein;protein_id=WP_011257718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 859667 863719 . + . ID=gene-IXO1104_RS03970;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=IXO1104_RS03970;old_locus_tag=IXO1104_03945 NZ_CP047492.1 Protein Homology CDS 859667 863719 . + 0 ID=cds-WP_011257719.1;Parent=gene-IXO1104_RS03970;Dbxref=Genbank:WP_011257719.1;Name=WP_011257719.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367790.1;locus_tag=IXO1104_RS03970;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_011257719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 864697 868494 . + . ID=gene-IXO1104_RS03975;Name=IXO1104_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03975;old_locus_tag=IXO1104_03950 NZ_CP047492.1 Protein Homology CDS 864697 868494 . + 0 ID=cds-WP_075240543.1;Parent=gene-IXO1104_RS03975;Dbxref=Genbank:WP_075240543.1;Name=WP_075240543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113272.1;locus_tag=IXO1104_RS03975;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_075240543.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 868715 870597 . + . ID=gene-IXO1104_RS03980;Name=IXO1104_RS03980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS03980;old_locus_tag=IXO1104_03955;pseudo=true NZ_CP047492.1 Protein Homology CDS 868715 870597 . + 0 ID=cds-IXO1104_RS03980;Parent=gene-IXO1104_RS03980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920748.1;locus_tag=IXO1104_RS03980;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 870727 872454 . + . ID=gene-IXO1104_RS03985;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=IXO1104_RS03985;old_locus_tag=IXO1104_03960 NZ_CP047492.1 Protein Homology CDS 870727 872454 . + 0 ID=cds-WP_012446069.1;Parent=gene-IXO1104_RS03985;Dbxref=Genbank:WP_012446069.1;Name=WP_012446069.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237945.1;locus_tag=IXO1104_RS03985;product=type II secretion system ATPase GspE;protein_id=WP_012446069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 872451 872630 . + . ID=gene-IXO1104_RS03990;Name=IXO1104_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03990;old_locus_tag=IXO1104_03965 NZ_CP047492.1 Protein Homology CDS 872451 872630 . + 0 ID=cds-WP_041181968.1;Parent=gene-IXO1104_RS03990;Dbxref=Genbank:WP_041181968.1;Name=WP_041181968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302117.1;locus_tag=IXO1104_RS03990;product=hypothetical protein;protein_id=WP_041181968.1;transl_table=11 NZ_CP047492.1 RefSeq gene 872630 873847 . + . ID=gene-IXO1104_RS03995;Name=IXO1104_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS03995;old_locus_tag=IXO1104_03970 NZ_CP047492.1 Protein Homology CDS 872630 873847 . + 0 ID=cds-WP_011257722.1;Parent=gene-IXO1104_RS03995;Dbxref=Genbank:WP_011257722.1;Name=WP_011257722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504592.1;locus_tag=IXO1104_RS03995;product=type II secretion system F family protein;protein_id=WP_011257722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 874115 874546 . + . ID=gene-IXO1104_RS04000;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=IXO1104_RS04000;old_locus_tag=IXO1104_03975 NZ_CP047492.1 Protein Homology CDS 874115 874546 . + 0 ID=cds-WP_011407642.1;Parent=gene-IXO1104_RS04000;Dbxref=Genbank:WP_011407642.1;Name=WP_011407642.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490502.1;locus_tag=IXO1104_RS04000;product=type II secretion system major pseudopilin GspG;protein_id=WP_011407642.1;transl_table=11 NZ_CP047492.1 RefSeq gene 874556 875065 . + . ID=gene-IXO1104_RS04005;Name=IXO1104_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04005;old_locus_tag=IXO1104_03980 NZ_CP047492.1 Protein Homology CDS 874556 875065 . + 0 ID=cds-WP_075240545.1;Parent=gene-IXO1104_RS04005;Dbxref=Genbank:WP_075240545.1;Name=WP_075240545.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920744.1;locus_tag=IXO1104_RS04005;product=GspH/FimT family pseudopilin;protein_id=WP_075240545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 875062 875478 . + . ID=gene-IXO1104_RS04010;Name=IXO1104_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04010;old_locus_tag=IXO1104_03985 NZ_CP047492.1 Protein Homology CDS 875062 875478 . + 0 ID=cds-WP_012446066.1;Parent=gene-IXO1104_RS04010;Dbxref=Genbank:WP_012446066.1;Name=WP_012446066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257725.1;locus_tag=IXO1104_RS04010;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012446066.1;transl_table=11 NZ_CP047492.1 RefSeq gene 875475 876110 . + . ID=gene-IXO1104_RS04015;Name=IXO1104_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04015;old_locus_tag=IXO1104_03990 NZ_CP047492.1 Protein Homology CDS 875475 876110 . + 0 ID=cds-WP_011257726.1;Parent=gene-IXO1104_RS04015;Dbxref=Genbank:WP_011257726.1;Name=WP_011257726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446065.1;locus_tag=IXO1104_RS04015;product=type II secretion system protein J;protein_id=WP_011257726.1;transl_table=11 NZ_CP047492.1 RefSeq gene 876107 876958 . + . ID=gene-IXO1104_RS04020;Name=IXO1104_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04020;old_locus_tag=IXO1104_03995 NZ_CP047492.1 Protein Homology CDS 876107 876958 . + 0 ID=cds-WP_011407644.1;Parent=gene-IXO1104_RS04020;Dbxref=Genbank:WP_011407644.1;Name=WP_011407644.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158144.1;locus_tag=IXO1104_RS04020;product=type II secretion system protein GspK;protein_id=WP_011407644.1;transl_table=11 NZ_CP047492.1 RefSeq gene 876955 878076 . + . ID=gene-IXO1104_RS04025;Name=IXO1104_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04025;old_locus_tag=IXO1104_04000 NZ_CP047492.1 Protein Homology CDS 876955 878076 . + 0 ID=cds-WP_011407645.1;Parent=gene-IXO1104_RS04025;Dbxref=Genbank:WP_011407645.1;Name=WP_011407645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504586.1;locus_tag=IXO1104_RS04025;product=PilN domain-containing protein;protein_id=WP_011407645.1;transl_table=11 NZ_CP047492.1 RefSeq gene 878060 878713 . + . ID=gene-IXO1104_RS04030;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=IXO1104_RS04030;old_locus_tag=IXO1104_04005 NZ_CP047492.1 Protein Homology CDS 878060 878713 . + 0 ID=cds-WP_011407646.1;Parent=gene-IXO1104_RS04030;Dbxref=Genbank:WP_011407646.1;Name=WP_011407646.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114570.1;locus_tag=IXO1104_RS04030;product=type II secretion system protein GspM;protein_id=WP_011407646.1;transl_table=11 NZ_CP047492.1 RefSeq gene 878703 879506 . + . ID=gene-IXO1104_RS04035;Name=IXO1104_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04035;old_locus_tag=IXO1104_04010 NZ_CP047492.1 Protein Homology CDS 878703 879506 . + 0 ID=cds-WP_075240546.1;Parent=gene-IXO1104_RS04035;Dbxref=Genbank:WP_075240546.1;Name=WP_075240546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035909.1;locus_tag=IXO1104_RS04035;product=general secretion pathway protein GspN;protein_id=WP_075240546.1;transl_table=11 NZ_CP047492.1 RefSeq gene 879503 881815 . + . ID=gene-IXO1104_RS04040;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=IXO1104_RS04040;old_locus_tag=IXO1104_04015 NZ_CP047492.1 Protein Homology CDS 879503 881815 . + 0 ID=cds-WP_011257731.1;Parent=gene-IXO1104_RS04040;Dbxref=Genbank:WP_011257731.1;Name=WP_011257731.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367762.1;locus_tag=IXO1104_RS04040;product=type II secretion system secretin GspD;protein_id=WP_011257731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 881812 882651 . + . ID=gene-IXO1104_RS04045;Name=IXO1104_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04045;old_locus_tag=IXO1104_04020 NZ_CP047492.1 Protein Homology CDS 881812 882651 . + 0 ID=cds-WP_011257732.1;Parent=gene-IXO1104_RS04045;Dbxref=Genbank:WP_011257732.1;Name=WP_011257732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901897.1;locus_tag=IXO1104_RS04045;product=hypothetical protein;protein_id=WP_011257732.1;transl_table=11 NZ_CP047492.1 RefSeq gene 883068 883796 . - . ID=gene-IXO1104_RS04050;Name=IXO1104_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04050;old_locus_tag=IXO1104_04025 NZ_CP047492.1 Protein Homology CDS 883068 883796 . - 0 ID=cds-WP_011257733.1;Parent=gene-IXO1104_RS04050;Dbxref=Genbank:WP_011257733.1;Name=WP_011257733.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257733.1;locus_tag=IXO1104_RS04050;product=UTRA domain-containing protein;protein_id=WP_011257733.1;transl_table=11 NZ_CP047492.1 RefSeq gene 883902 884477 . - . ID=gene-IXO1104_RS04055;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04055;old_locus_tag=IXO1104_04030 NZ_CP047492.1 Protein Homology CDS 883902 884477 . - 0 ID=cds-WP_011407648.1;Parent=gene-IXO1104_RS04055;Dbxref=Genbank:WP_011407648.1;Name=WP_011407648.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348575.1;locus_tag=IXO1104_RS04055;product=nicotinamide riboside transporter PnuC;protein_id=WP_011407648.1;transl_table=11 NZ_CP047492.1 RefSeq gene 884592 884663 . + . ID=gene-IXO1104_RS04060;Name=IXO1104_RS04060;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04060;old_locus_tag=IXO1104_04035 NZ_CP047492.1 cmsearch ncRNA 884592 884663 . + . ID=rna-IXO1104_RS04060;Parent=gene-IXO1104_RS04060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04060;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 884592 884663 . + . ID=exon-IXO1104_RS04060-1;Parent=rna-IXO1104_RS04060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04060;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 884853 887015 . - . ID=gene-IXO1104_RS04065;Name=IXO1104_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04065;old_locus_tag=IXO1104_04040 NZ_CP047492.1 Protein Homology CDS 884853 887015 . - 0 ID=cds-WP_075240547.1;Parent=gene-IXO1104_RS04065;Dbxref=Genbank:WP_075240547.1;Name=WP_075240547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429142.1;locus_tag=IXO1104_RS04065;product=TonB-dependent receptor;protein_id=WP_075240547.1;transl_table=11 NZ_CP047492.1 RefSeq gene 887051 888208 . - . ID=gene-IXO1104_RS04070;Name=IXO1104_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04070;old_locus_tag=IXO1104_04045 NZ_CP047492.1 Protein Homology CDS 887051 888208 . - 0 ID=cds-WP_075240548.1;Parent=gene-IXO1104_RS04070;Dbxref=Genbank:WP_075240548.1;Name=WP_075240548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300523.1;locus_tag=IXO1104_RS04070;product=phosphotransferase;protein_id=WP_075240548.1;transl_table=11 NZ_CP047492.1 RefSeq gene 888819 889658 . + . ID=gene-IXO1104_RS04075;Name=IXO1104_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04075;old_locus_tag=IXO1104_04050 NZ_CP047492.1 Protein Homology CDS 888819 889658 . + 0 ID=cds-WP_011407652.1;Parent=gene-IXO1104_RS04075;Dbxref=Genbank:WP_011407652.1;Name=WP_011407652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174042.1;locus_tag=IXO1104_RS04075;product=glycosyltransferase family 2 protein;protein_id=WP_011407652.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 889700 890482 . + . ID=gene-IXO1104_RS04080;Name=IXO1104_RS04080;end_range=890482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04080;old_locus_tag=IXO1104_04055;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 889700 890482 . + 0 ID=cds-IXO1104_RS04080;Parent=gene-IXO1104_RS04080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=890482,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445038.1;locus_tag=IXO1104_RS04080;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 890587 890694 . - . ID=gene-IXO1104_RS04085;Name=IXO1104_RS04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04085;partial=true;pseudo=true;start_range=.,890587 NZ_CP047492.1 Protein Homology CDS 890587 890694 . - 0 ID=cds-IXO1104_RS04085;Parent=gene-IXO1104_RS04085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445011.1;locus_tag=IXO1104_RS04085;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,890587;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 890732 891013 . + . ID=gene-IXO1104_RS04090;Name=IXO1104_RS04090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04090;old_locus_tag=IXO1104_04065;partial=true;pseudo=true;start_range=.,890732 NZ_CP047492.1 Protein Homology CDS 890732 891013 . + 0 ID=cds-IXO1104_RS04090;Parent=gene-IXO1104_RS04090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1104_RS04090;partial=true;product=transposase;pseudo=true;start_range=.,890732;transl_table=11 NZ_CP047492.1 RefSeq direct_repeat 891032 892248 . + . ID=id-NZ_CP047492.1:891032..892248;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=891032..891062;rpt_unit_seq=gtttcaatccacgcgcccgtgaggacgcgac NZ_CP047492.1 RefSeq gene 892357 893313 . + . ID=gene-IXO1104_RS04095;Name=IXO1104_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04095;old_locus_tag=IXO1104_04070 NZ_CP047492.1 Protein Homology CDS 892357 893313 . + 0 ID=cds-WP_164994102.1;Parent=gene-IXO1104_RS04095;Dbxref=Genbank:WP_164994102.1;Name=WP_164994102.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS04095;product=IS30 family transposase;protein_id=WP_164994102.1;transl_table=11 NZ_CP047492.1 RefSeq direct_repeat 893341 899281 . + . ID=id-NZ_CP047492.1:893341..899281;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=893341..893371;rpt_unit_seq=gtttcaatccacgcgcccgtgaggacgcgac NZ_CP047492.1 RefSeq gene 899469 899759 . - . ID=gene-IXO1104_RS04100;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=IXO1104_RS04100;old_locus_tag=IXO1104_04075 NZ_CP047492.1 Protein Homology CDS 899469 899759 . - 0 ID=cds-WP_011257741.1;Parent=gene-IXO1104_RS04100;Dbxref=Genbank:WP_011257741.1;Name=WP_011257741.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927092.1;locus_tag=IXO1104_RS04100;product=CRISPR-associated endonuclease Cas2;protein_id=WP_011257741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 899774 900808 . - . ID=gene-IXO1104_RS04105;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=IXO1104_RS04105;old_locus_tag=IXO1104_04080 NZ_CP047492.1 Protein Homology CDS 899774 900808 . - 0 ID=cds-WP_011407655.1;Parent=gene-IXO1104_RS04105;Dbxref=Genbank:WP_011407655.1;Name=WP_011407655.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927095.1;locus_tag=IXO1104_RS04105;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_011407655.1;transl_table=11 NZ_CP047492.1 RefSeq gene 900811 901443 . - . ID=gene-IXO1104_RS04110;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=IXO1104_RS04110;old_locus_tag=IXO1104_04085 NZ_CP047492.1 Protein Homology CDS 900811 901443 . - 0 ID=cds-WP_011257743.1;Parent=gene-IXO1104_RS04110;Dbxref=Genbank:WP_011257743.1;Name=WP_011257743.1;Ontology_term=GO:0043571,GO:0004518;gbkey=CDS;gene=cas4;go_function=nuclease activity|0004518||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927098.1;locus_tag=IXO1104_RS04110;product=CRISPR-associated protein Cas4;protein_id=WP_011257743.1;transl_table=11 NZ_CP047492.1 RefSeq gene 901463 902329 . - . ID=gene-IXO1104_RS04115;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=IXO1104_RS04115;old_locus_tag=IXO1104_04090 NZ_CP047492.1 Protein Homology CDS 901463 902329 . - 0 ID=cds-WP_011257744.1;Parent=gene-IXO1104_RS04115;Dbxref=Genbank:WP_011257744.1;Name=WP_011257744.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372412.1;locus_tag=IXO1104_RS04115;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_011257744.1;transl_table=11 NZ_CP047492.1 RefSeq gene 902326 904170 . - . ID=gene-IXO1104_RS04120;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=IXO1104_RS04120;old_locus_tag=IXO1104_04095 NZ_CP047492.1 Protein Homology CDS 902326 904170 . - 0 ID=cds-WP_011257745.1;Parent=gene-IXO1104_RS04120;Dbxref=Genbank:WP_011257745.1;Name=WP_011257745.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119023.1;locus_tag=IXO1104_RS04120;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_011257745.1;transl_table=11 NZ_CP047492.1 RefSeq gene 904167 904781 . - . ID=gene-IXO1104_RS04125;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=IXO1104_RS04125;old_locus_tag=IXO1104_04100 NZ_CP047492.1 Protein Homology CDS 904167 904781 . - 0 ID=cds-WP_012446057.1;Parent=gene-IXO1104_RS04125;Dbxref=Genbank:WP_012446057.1;Name=WP_012446057.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907375.1;locus_tag=IXO1104_RS04125;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_012446057.1;transl_table=11 NZ_CP047492.1 RefSeq gene 904969 907260 . - . ID=gene-IXO1104_RS04130;Name=IXO1104_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04130;old_locus_tag=IXO1104_04105 NZ_CP047492.1 Protein Homology CDS 904969 907260 . - 0 ID=cds-WP_011257747.1;Parent=gene-IXO1104_RS04130;Dbxref=Genbank:WP_011257747.1;Name=WP_011257747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257747.1;locus_tag=IXO1104_RS04130;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_011257747.1;transl_table=11 NZ_CP047492.1 RefSeq gene 907372 908337 . + . ID=gene-IXO1104_RS04135;Name=IXO1104_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04135;old_locus_tag=IXO1104_04110 NZ_CP047492.1 Protein Homology CDS 907372 908337 . + 0 ID=cds-WP_154741240.1;Parent=gene-IXO1104_RS04135;Dbxref=Genbank:WP_154741240.1;Name=WP_154741240.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04135;product=IS1595 family transposase;protein_id=WP_154741240.1;transl_table=11 NZ_CP047492.1 RefSeq gene 908728 909303 . - . ID=gene-IXO1104_RS04140;Name=IXO1104_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04140;old_locus_tag=IXO1104_04120 NZ_CP047492.1 Protein Homology CDS 908728 909303 . - 0 ID=cds-WP_011257750.1;Parent=gene-IXO1104_RS04140;Dbxref=Genbank:WP_011257750.1;Name=WP_011257750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159643.1;locus_tag=IXO1104_RS04140;product=Maf-like protein;protein_id=WP_011257750.1;transl_table=11 NZ_CP047492.1 RefSeq gene 909416 909925 . + . ID=gene-IXO1104_RS04145;Name=IXO1104_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04145;old_locus_tag=IXO1104_04125 NZ_CP047492.1 Protein Homology CDS 909416 909925 . + 0 ID=cds-WP_011407659.1;Parent=gene-IXO1104_RS04145;Dbxref=Genbank:WP_011407659.1;Name=WP_011407659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814328.1;locus_tag=IXO1104_RS04145;product=YceD family protein;protein_id=WP_011407659.1;transl_table=11 NZ_CP047492.1 RefSeq gene 910024 910218 . + . ID=gene-IXO1104_RS04150;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=IXO1104_RS04150;old_locus_tag=IXO1104_04130 NZ_CP047492.1 Protein Homology CDS 910024 910218 . + 0 ID=cds-WP_075239764.1;Parent=gene-IXO1104_RS04150;Dbxref=Genbank:WP_075239764.1;Name=WP_075239764.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302036.1;locus_tag=IXO1104_RS04150;product=50S ribosomal protein L32;protein_id=WP_075239764.1;transl_table=11 NZ_CP047492.1 RefSeq gene 910308 911285 . + . ID=gene-IXO1104_RS04155;Name=IXO1104_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04155;old_locus_tag=IXO1104_04135 NZ_CP047492.1 Protein Homology CDS 910308 911285 . + 0 ID=cds-WP_011257752.1;Parent=gene-IXO1104_RS04155;Dbxref=Genbank:WP_011257752.1;Name=WP_011257752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502254.1;locus_tag=IXO1104_RS04155;product=ketoacyl-ACP synthase III;protein_id=WP_011257752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 911515 911955 . + . ID=gene-IXO1104_RS04160;Name=IXO1104_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04160;old_locus_tag=IXO1104_04140 NZ_CP047492.1 Protein Homology CDS 911515 911955 . + 0 ID=cds-WP_011257753.1;Parent=gene-IXO1104_RS04160;Dbxref=Genbank:WP_011257753.1;Name=WP_011257753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969006.1;locus_tag=IXO1104_RS04160;product=MEKHLA domain-containing protein;protein_id=WP_011257753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 912233 913177 . + . ID=gene-IXO1104_RS04165;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=IXO1104_RS04165;old_locus_tag=IXO1104_04145 NZ_CP047492.1 Protein Homology CDS 912233 913177 . + 0 ID=cds-WP_011257754.1;Parent=gene-IXO1104_RS04165;Dbxref=Genbank:WP_011257754.1;Name=WP_011257754.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304127.1;locus_tag=IXO1104_RS04165;product=ACP S-malonyltransferase;protein_id=WP_011257754.1;transl_table=11 NZ_CP047492.1 RefSeq gene 913260 914003 . + . ID=gene-IXO1104_RS04170;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=IXO1104_RS04170;old_locus_tag=IXO1104_04150 NZ_CP047492.1 Protein Homology CDS 913260 914003 . + 0 ID=cds-WP_011407660.1;Parent=gene-IXO1104_RS04170;Dbxref=Genbank:WP_011407660.1;Name=WP_011407660.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814323.1;locus_tag=IXO1104_RS04170;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_011407660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 914208 914447 . + . ID=gene-IXO1104_RS04175;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=IXO1104_RS04175;old_locus_tag=IXO1104_04155 NZ_CP047492.1 Protein Homology CDS 914208 914447 . + 0 ID=cds-WP_010368407.1;Parent=gene-IXO1104_RS04175;Dbxref=Genbank:WP_010368407.1;Name=WP_010368407.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535667.1;locus_tag=IXO1104_RS04175;product=acyl carrier protein;protein_id=WP_010368407.1;transl_table=11 NZ_CP047492.1 RefSeq gene 914589 915824 . + . ID=gene-IXO1104_RS04180;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=IXO1104_RS04180;old_locus_tag=IXO1104_04160 NZ_CP047492.1 Protein Homology CDS 914589 915824 . + 0 ID=cds-WP_011407661.1;Parent=gene-IXO1104_RS04180;Dbxref=Genbank:WP_011407661.1;Name=WP_011407661.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302031.1;locus_tag=IXO1104_RS04180;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011407661.1;transl_table=11 NZ_CP047492.1 RefSeq gene 915995 917350 . + . ID=gene-IXO1104_RS04185;Name=IXO1104_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04185;old_locus_tag=IXO1104_04165 NZ_CP047492.1 Protein Homology CDS 915995 917350 . + 0 ID=cds-WP_075239763.1;Parent=gene-IXO1104_RS04185;Dbxref=Genbank:WP_075239763.1;Name=WP_075239763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160233.1;locus_tag=IXO1104_RS04185;product=aminodeoxychorismate synthase component I;protein_id=WP_075239763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 917411 918484 . + . ID=gene-IXO1104_RS04190;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=IXO1104_RS04190;old_locus_tag=IXO1104_04170 NZ_CP047492.1 Protein Homology CDS 917411 918484 . + 0 ID=cds-WP_011257758.1;Parent=gene-IXO1104_RS04190;Dbxref=Genbank:WP_011257758.1;Name=WP_011257758.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160234.1;locus_tag=IXO1104_RS04190;product=endolytic transglycosylase MltG;protein_id=WP_011257758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 918481 919440 . + . ID=gene-IXO1104_RS04195;Name=IXO1104_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04195;old_locus_tag=IXO1104_04175 NZ_CP047492.1 Protein Homology CDS 918481 919440 . + 0 ID=cds-WP_075239762.1;Parent=gene-IXO1104_RS04195;Dbxref=Genbank:WP_075239762.1;Name=WP_075239762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969013.1;locus_tag=IXO1104_RS04195;product=DNA polymerase III subunit delta';protein_id=WP_075239762.1;transl_table=11 NZ_CP047492.1 RefSeq gene 919437 919790 . + . ID=gene-IXO1104_RS04200;Name=IXO1104_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04200;old_locus_tag=IXO1104_04180 NZ_CP047492.1 Protein Homology CDS 919437 919790 . + 0 ID=cds-WP_011257760.1;Parent=gene-IXO1104_RS04200;Dbxref=Genbank:WP_011257760.1;Name=WP_011257760.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155784.1;locus_tag=IXO1104_RS04200;product=PilZ domain-containing protein;protein_id=WP_011257760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 920066 920140 . + . ID=gene-IXO1104_RS04205;Name=IXO1104_RS04205;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS04205;old_locus_tag=IXO1104_04185 NZ_CP047492.1 tRNAscan-SE tRNA 920066 920140 . + . ID=rna-IXO1104_RS04205;Parent=gene-IXO1104_RS04205;anticodon=(pos:920098..920100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS04205;product=tRNA-Val NZ_CP047492.1 tRNAscan-SE exon 920066 920140 . + . ID=exon-IXO1104_RS04205-1;Parent=rna-IXO1104_RS04205;anticodon=(pos:920098..920100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS04205;product=tRNA-Val NZ_CP047492.1 RefSeq gene 920480 921121 . + . ID=gene-IXO1104_RS04210;Name=IXO1104_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04210;old_locus_tag=IXO1104_04190 NZ_CP047492.1 GeneMarkS-2+ CDS 920480 921121 . + 0 ID=cds-WP_075240501.1;Parent=gene-IXO1104_RS04210;Dbxref=Genbank:WP_075240501.1;Name=WP_075240501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS04210;product=hypothetical protein;protein_id=WP_075240501.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 921331 921552 . + . ID=gene-IXO1104_RS04215;Name=IXO1104_RS04215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04215;old_locus_tag=IXO1104_04195;partial=true;pseudo=true;start_range=.,921331 NZ_CP047492.1 Protein Homology CDS 921331 921552 . + 0 ID=cds-IXO1104_RS04215;Parent=gene-IXO1104_RS04215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160235.1;locus_tag=IXO1104_RS04215;partial=true;product=hypothetical protein;pseudo=true;start_range=.,921331;transl_table=11 NZ_CP047492.1 RefSeq gene 921635 921961 . + . ID=gene-IXO1104_RS04220;Name=IXO1104_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04220;old_locus_tag=IXO1104_04200 NZ_CP047492.1 Protein Homology CDS 921635 921961 . + 0 ID=cds-WP_027703726.1;Parent=gene-IXO1104_RS04220;Dbxref=Genbank:WP_027703726.1;Name=WP_027703726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089549.1;locus_tag=IXO1104_RS04220;product=hypothetical protein;protein_id=WP_027703726.1;transl_table=11 NZ_CP047492.1 RefSeq gene 922198 923796 . - . ID=gene-IXO1104_RS04225;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=IXO1104_RS04225;old_locus_tag=IXO1104_04205 NZ_CP047492.1 Protein Homology CDS 922198 923796 . - 0 ID=cds-WP_027703727.1;Parent=gene-IXO1104_RS04225;Dbxref=Genbank:WP_027703727.1;Name=WP_027703727.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502265.1;locus_tag=IXO1104_RS04225;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_027703727.1;transl_table=11 NZ_CP047492.1 RefSeq gene 923942 924838 . + . ID=gene-IXO1104_RS04230;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS04230;old_locus_tag=IXO1104_04210 NZ_CP047492.1 Protein Homology CDS 923942 924838 . + 0 ID=cds-WP_011257763.1;Parent=gene-IXO1104_RS04230;Dbxref=Genbank:WP_011257763.1;Name=WP_011257763.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257763.1;locus_tag=IXO1104_RS04230;product=methylisocitrate lyase;protein_id=WP_011257763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 924914 926068 . + . ID=gene-IXO1104_RS04235;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04235;old_locus_tag=IXO1104_04215 NZ_CP047492.1 Protein Homology CDS 924914 926068 . + 0 ID=cds-WP_012446045.1;Parent=gene-IXO1104_RS04235;Dbxref=Genbank:WP_012446045.1;Name=WP_012446045.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502267.1;locus_tag=IXO1104_RS04235;product=2-methylcitrate synthase;protein_id=WP_012446045.1;transl_table=11 NZ_CP047492.1 RefSeq gene 926249 928840 . + . ID=gene-IXO1104_RS04240;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=IXO1104_RS04240;old_locus_tag=IXO1104_04220 NZ_CP047492.1 Protein Homology CDS 926249 928840 . + 0 ID=cds-WP_011257765.1;Parent=gene-IXO1104_RS04240;Dbxref=Genbank:WP_011257765.1;Name=WP_011257765.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849833.1;locus_tag=IXO1104_RS04240;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_011257765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 928924 929091 . + . ID=gene-IXO1104_RS04245;Name=IXO1104_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04245 NZ_CP047492.1 Protein Homology CDS 928924 929091 . + 0 ID=cds-WP_012446043.1;Parent=gene-IXO1104_RS04245;Dbxref=Genbank:WP_012446043.1;Name=WP_012446043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502269.1;locus_tag=IXO1104_RS04245;product=hypothetical protein;protein_id=WP_012446043.1;transl_table=11 NZ_CP047492.1 RefSeq gene 929163 929300 . + . ID=gene-IXO1104_RS04250;Name=IXO1104_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04250;old_locus_tag=IXO1104_04225 NZ_CP047492.1 Protein Homology CDS 929163 929300 . + 0 ID=cds-WP_011407669.1;Parent=gene-IXO1104_RS04250;Dbxref=Genbank:WP_011407669.1;Name=WP_011407669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502270.1;locus_tag=IXO1104_RS04250;product=hypothetical protein;protein_id=WP_011407669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 929573 930772 . + . ID=gene-IXO1104_RS04255;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=IXO1104_RS04255;old_locus_tag=IXO1104_04230 NZ_CP047492.1 Protein Homology CDS 929573 930772 . + 0 ID=cds-WP_011257767.1;Parent=gene-IXO1104_RS04255;Dbxref=Genbank:WP_011257767.1;Name=WP_011257767.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502272.1;locus_tag=IXO1104_RS04255;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_011257767.1;transl_table=11 NZ_CP047492.1 RefSeq gene 931272 933488 . + . ID=gene-IXO1104_RS04260;Name=IXO1104_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04260;old_locus_tag=IXO1104_04235 NZ_CP047492.1 Protein Homology CDS 931272 933488 . + 0 ID=cds-WP_011407672.1;Parent=gene-IXO1104_RS04260;Dbxref=Genbank:WP_011407672.1;Name=WP_011407672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305008.1;locus_tag=IXO1104_RS04260;product=TonB-dependent receptor;protein_id=WP_011407672.1;transl_table=11 NZ_CP047492.1 RefSeq gene 933567 934565 . + . ID=gene-IXO1104_RS04265;Name=IXO1104_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04265;old_locus_tag=IXO1104_04240 NZ_CP047492.1 Protein Homology CDS 933567 934565 . + 0 ID=cds-WP_027703871.1;Parent=gene-IXO1104_RS04265;Dbxref=Genbank:WP_027703871.1;Name=WP_027703871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089556.1;locus_tag=IXO1104_RS04265;product=nucleoside hydrolase;protein_id=WP_027703871.1;transl_table=11 NZ_CP047492.1 RefSeq gene 934675 934857 . - . ID=gene-IXO1104_RS04270;Name=IXO1104_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04270;old_locus_tag=IXO1104_04245 NZ_CP047492.1 Protein Homology CDS 934675 934857 . - 0 ID=cds-WP_011257770.1;Parent=gene-IXO1104_RS04270;Dbxref=Genbank:WP_011257770.1;Name=WP_011257770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913246.1;locus_tag=IXO1104_RS04270;product=hypothetical protein;protein_id=WP_011257770.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 935160 935626 . + . ID=gene-IXO1104_RS04275;Name=IXO1104_RS04275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04275;old_locus_tag=IXO1104_04250;pseudo=true NZ_CP047492.1 Protein Homology CDS 935160 935626 . + 0 ID=cds-IXO1104_RS04275;Parent=gene-IXO1104_RS04275;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913955.1;locus_tag=IXO1104_RS04275;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 935837 938824 . + . ID=gene-IXO1104_RS04280;Name=IXO1104_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04280;old_locus_tag=IXO1104_04255 NZ_CP047492.1 Protein Homology CDS 935837 938824 . + 0 ID=cds-WP_069964984.1;Parent=gene-IXO1104_RS04280;Dbxref=Genbank:WP_069964984.1;Name=WP_069964984.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483916.1;locus_tag=IXO1104_RS04280;product=TonB-dependent receptor;protein_id=WP_069964984.1;transl_table=11 NZ_CP047492.1 RefSeq gene 938999 939946 . + . ID=gene-IXO1104_RS04285;Name=IXO1104_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04285;old_locus_tag=IXO1104_04260 NZ_CP047492.1 Protein Homology CDS 938999 939946 . + 0 ID=cds-WP_041182786.1;Parent=gene-IXO1104_RS04285;Dbxref=Genbank:WP_041182786.1;Name=WP_041182786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944837.1;locus_tag=IXO1104_RS04285;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_041182786.1;transl_table=11 NZ_CP047492.1 RefSeq gene 940445 940981 . + . ID=gene-IXO1104_RS04290;Name=IXO1104_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04290;old_locus_tag=IXO1104_04265 NZ_CP047492.1 Protein Homology CDS 940445 940981 . + 0 ID=cds-WP_075243014.1;Parent=gene-IXO1104_RS04290;Dbxref=Genbank:WP_075243014.1;Name=WP_075243014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407676.1;locus_tag=IXO1104_RS04290;product=hypothetical protein;protein_id=WP_075243014.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 940989 941159 . + . ID=gene-IXO1104_RS04295;Name=IXO1104_RS04295;end_range=941159,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04295;old_locus_tag=IXO1104_04270;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 940989 941159 . + 0 ID=cds-IXO1104_RS04295;Parent=gene-IXO1104_RS04295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=941159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS04295;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 941227 942462 . + . ID=gene-IXO1104_RS04300;Name=IXO1104_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04300;old_locus_tag=IXO1104_04275 NZ_CP047492.1 Protein Homology CDS 941227 942462 . + 0 ID=cds-WP_012445794.1;Parent=gene-IXO1104_RS04300;Dbxref=Genbank:WP_012445794.1;Name=WP_012445794.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS04300;product=ISL3 family transposase;protein_id=WP_012445794.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 942483 943118 . + . ID=gene-IXO1104_RS04305;Name=IXO1104_RS04305;end_range=943118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04305;old_locus_tag=IXO1104_04280;partial=true;pseudo=true;start_range=.,942483 NZ_CP047492.1 Protein Homology CDS 942483 943118 . + 0 ID=cds-IXO1104_RS04305;Parent=gene-IXO1104_RS04305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=943118,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04305;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,942483;transl_table=11 NZ_CP047492.1 RefSeq gene 943160 943958 . + . ID=gene-IXO1104_RS04310;Name=IXO1104_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04310;old_locus_tag=IXO1104_04285 NZ_CP047492.1 Protein Homology CDS 943160 943431 . + 0 ID=cds-WP_094187728.1-2;Parent=gene-IXO1104_RS04310;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04310;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 943430 943958 . + 1 ID=cds-WP_094187728.1-2;Parent=gene-IXO1104_RS04310;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04310;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 943968 944543 . + . ID=gene-IXO1104_RS04315;Name=IXO1104_RS04315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04315;old_locus_tag=IXO1104_04290;partial=true;pseudo=true;start_range=.,943968 NZ_CP047492.1 Protein Homology CDS 943968 944543 . + 0 ID=cds-IXO1104_RS04315;Parent=gene-IXO1104_RS04315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04315;partial=true;product=transposase;pseudo=true;start_range=.,943968;transl_table=11 NZ_CP047492.1 RefSeq gene 944693 944769 . + . ID=gene-IXO1104_RS04320;Name=IXO1104_RS04320;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04320;old_locus_tag=IXO1104_04295 NZ_CP047492.1 cmsearch ncRNA 944693 944769 . + . ID=rna-IXO1104_RS04320;Parent=gene-IXO1104_RS04320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04320;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 944693 944769 . + . ID=exon-IXO1104_RS04320-1;Parent=rna-IXO1104_RS04320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04320;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 944888 945850 . + . ID=gene-IXO1104_RS04325;Name=IXO1104_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04325;old_locus_tag=IXO1104_04300 NZ_CP047492.1 Protein Homology CDS 944888 945850 . + 0 ID=cds-WP_041182785.1;Parent=gene-IXO1104_RS04325;Dbxref=Genbank:WP_041182785.1;Name=WP_041182785.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407678.1;locus_tag=IXO1104_RS04325;product=IS30 family transposase;protein_id=WP_041182785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 945990 946550 . - . ID=gene-IXO1104_RS04330;Name=IXO1104_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04330;old_locus_tag=IXO1104_04305 NZ_CP047492.1 Protein Homology CDS 945990 946550 . - 0 ID=cds-WP_012446027.1;Parent=gene-IXO1104_RS04330;Dbxref=Genbank:WP_012446027.1;Name=WP_012446027.1;Ontology_term=GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996162.1;locus_tag=IXO1104_RS04330;product=ferritin-like domain-containing protein;protein_id=WP_012446027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 946593 947075 . - . ID=gene-IXO1104_RS04335;Name=IXO1104_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04335;old_locus_tag=IXO1104_04310 NZ_CP047492.1 Protein Homology CDS 946593 947075 . - 0 ID=cds-WP_011257779.1;Parent=gene-IXO1104_RS04335;Dbxref=Genbank:WP_011257779.1;Name=WP_011257779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155767.1;locus_tag=IXO1104_RS04335;product=peroxiredoxin;protein_id=WP_011257779.1;transl_table=11 NZ_CP047492.1 RefSeq gene 947238 947714 . + . ID=gene-IXO1104_RS04340;Name=IXO1104_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04340;old_locus_tag=IXO1104_04315 NZ_CP047492.1 Protein Homology CDS 947238 947714 . + 0 ID=cds-WP_011407679.1;Parent=gene-IXO1104_RS04340;Dbxref=Genbank:WP_011407679.1;Name=WP_011407679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155766.1;locus_tag=IXO1104_RS04340;product=Hsp20/alpha crystallin family protein;protein_id=WP_011407679.1;transl_table=11 NZ_CP047492.1 RefSeq gene 948125 949024 . + . ID=gene-IXO1104_RS04345;Name=IXO1104_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04345;old_locus_tag=IXO1104_04320 NZ_CP047492.1 Protein Homology CDS 948125 949024 . + 0 ID=cds-WP_075239834.1;Parent=gene-IXO1104_RS04345;Dbxref=Genbank:WP_075239834.1;Name=WP_075239834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257781.1;locus_tag=IXO1104_RS04345;product=DnaJ domain-containing protein;protein_id=WP_075239834.1;transl_table=11 NZ_CP047492.1 RefSeq gene 949264 949650 . + . ID=gene-IXO1104_RS04350;Name=pilH;gbkey=Gene;gene=pilH;gene_biotype=protein_coding;locus_tag=IXO1104_RS04350;old_locus_tag=IXO1104_04325 NZ_CP047492.1 Protein Homology CDS 949264 949650 . + 0 ID=cds-WP_011257782.1;Parent=gene-IXO1104_RS04350;Dbxref=Genbank:WP_011257782.1;Name=WP_011257782.1;gbkey=CDS;gene=pilH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036249.1;locus_tag=IXO1104_RS04350;product=twitching motility response regulator PilH;protein_id=WP_011257782.1;transl_table=11 NZ_CP047492.1 RefSeq gene 950280 951407 . + . ID=gene-IXO1104_RS04355;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=IXO1104_RS04355;old_locus_tag=IXO1104_04330 NZ_CP047492.1 Protein Homology CDS 950280 951407 . + 0 ID=cds-WP_011407680.1;Parent=gene-IXO1104_RS04355;Dbxref=Genbank:WP_011407680.1;Name=WP_011407680.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920523.1;locus_tag=IXO1104_RS04355;product=FtsH protease activity modulator HflK;protein_id=WP_011407680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 951407 952270 . + . ID=gene-IXO1104_RS04360;Name=IXO1104_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04360;old_locus_tag=IXO1104_04335 NZ_CP047492.1 Protein Homology CDS 951407 952270 . + 0 ID=cds-WP_027703756.1;Parent=gene-IXO1104_RS04360;Dbxref=Genbank:WP_027703756.1;Name=WP_027703756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449475.1;locus_tag=IXO1104_RS04360;product=protease modulator HflC;protein_id=WP_027703756.1;transl_table=11 NZ_CP047492.1 RefSeq gene 952565 952750 . + . ID=gene-IXO1104_RS04365;Name=IXO1104_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04365;old_locus_tag=IXO1104_04340 NZ_CP047492.1 Protein Homology CDS 952565 952750 . + 0 ID=cds-WP_011257785.1;Parent=gene-IXO1104_RS04365;Dbxref=Genbank:WP_011257785.1;Name=WP_011257785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257785.1;locus_tag=IXO1104_RS04365;product=DUF2065 family protein;protein_id=WP_011257785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 953088 954380 . + . ID=gene-IXO1104_RS04370;Name=IXO1104_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04370;old_locus_tag=IXO1104_04345 NZ_CP047492.1 Protein Homology CDS 953088 954380 . + 0 ID=cds-WP_012446024.1;Parent=gene-IXO1104_RS04370;Dbxref=Genbank:WP_012446024.1;Name=WP_012446024.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=IXO1104_RS04370;product=adenylosuccinate synthase;protein_id=WP_012446024.1;transl_table=11 NZ_CP047492.1 RefSeq gene 954706 957378 . + . ID=gene-IXO1104_RS04375;Name=IXO1104_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04375;old_locus_tag=IXO1104_04350 NZ_CP047492.1 Protein Homology CDS 954706 957378 . + 0 ID=cds-WP_012446023.1;Parent=gene-IXO1104_RS04375;Dbxref=Genbank:WP_012446023.1;Name=WP_012446023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368450.1;locus_tag=IXO1104_RS04375;product=M1 family metallopeptidase;protein_id=WP_012446023.1;transl_table=11 NZ_CP047492.1 RefSeq gene 957572 957850 . - . ID=gene-IXO1104_RS04380;Name=IXO1104_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04380 NZ_CP047492.1 Protein Homology CDS 957572 957850 . - 0 ID=cds-WP_033013340.1;Parent=gene-IXO1104_RS04380;Dbxref=Genbank:WP_033013340.1;Name=WP_033013340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020421.2;locus_tag=IXO1104_RS04380;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_033013340.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 957866 958354 . - . ID=gene-IXO1104_RS04385;Name=IXO1104_RS04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04385;partial=true;pseudo=true;start_range=.,957866 NZ_CP047492.1 Protein Homology CDS 957866 958354 . - 0 ID=cds-IXO1104_RS04385;Parent=gene-IXO1104_RS04385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1104_RS04385;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,957866;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 958465 959841 . - . ID=gene-IXO1104_RS04390;Name=IXO1104_RS04390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04390;old_locus_tag=IXO1104_04360;pseudo=true NZ_CP047492.1 Protein Homology CDS 958465 959841 . - 0 ID=cds-IXO1104_RS04390;Parent=gene-IXO1104_RS04390;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS04390;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 960109 960720 . + . ID=gene-IXO1104_RS04395;Name=IXO1104_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04395;old_locus_tag=IXO1104_04365 NZ_CP047492.1 Protein Homology CDS 960109 960720 . + 0 ID=cds-WP_230455450.1;Parent=gene-IXO1104_RS04395;Dbxref=Genbank:WP_230455450.1;Name=WP_230455450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303840.1;locus_tag=IXO1104_RS04395;product=helix-turn-helix domain-containing protein;protein_id=WP_230455450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 960720 961157 . + . ID=gene-IXO1104_RS04400;Name=IXO1104_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04400;old_locus_tag=IXO1104_04370 NZ_CP047492.1 GeneMarkS-2+ CDS 960720 961157 . + 0 ID=cds-WP_011257792.1;Parent=gene-IXO1104_RS04400;Dbxref=Genbank:WP_011257792.1;Name=WP_011257792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS04400;product=hypothetical protein;protein_id=WP_011257792.1;transl_table=11 NZ_CP047492.1 RefSeq gene 961440 961880 . + . ID=gene-IXO1104_RS04405;Name=IXO1104_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04405;old_locus_tag=IXO1104_04375 NZ_CP047492.1 Protein Homology CDS 961440 961880 . + 0 ID=cds-WP_228329688.1;Parent=gene-IXO1104_RS04405;Dbxref=Genbank:WP_228329688.1;Name=WP_228329688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365472.1;locus_tag=IXO1104_RS04405;product=PH domain-containing protein;protein_id=WP_228329688.1;transl_table=11 NZ_CP047492.1 RefSeq gene 962006 962203 . + . ID=gene-IXO1104_RS04410;Name=IXO1104_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04410;old_locus_tag=IXO1104_04380 NZ_CP047492.1 Protein Homology CDS 962006 962203 . + 0 ID=cds-WP_011257793.1;Parent=gene-IXO1104_RS04410;Dbxref=Genbank:WP_011257793.1;Name=WP_011257793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483377.1;locus_tag=IXO1104_RS04410;product=zinc-finger domain-containing protein;protein_id=WP_011257793.1;transl_table=11 NZ_CP047492.1 RefSeq gene 962213 963325 . + . ID=gene-IXO1104_RS04415;Name=IXO1104_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04415;old_locus_tag=IXO1104_04385 NZ_CP047492.1 Protein Homology CDS 962213 963325 . + 0 ID=cds-WP_011407685.1;Parent=gene-IXO1104_RS04415;Dbxref=Genbank:WP_011407685.1;Name=WP_011407685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483375.1;locus_tag=IXO1104_RS04415;product=glycosyltransferase;protein_id=WP_011407685.1;transl_table=11 NZ_CP047492.1 RefSeq gene 963306 964640 . + . ID=gene-IXO1104_RS04420;Name=IXO1104_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04420;old_locus_tag=IXO1104_04390 NZ_CP047492.1 Protein Homology CDS 963306 964640 . + 0 ID=cds-WP_011257795.1;Parent=gene-IXO1104_RS04420;Dbxref=Genbank:WP_011257795.1;Name=WP_011257795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257795.1;locus_tag=IXO1104_RS04420;product=O-antigen ligase family protein;protein_id=WP_011257795.1;transl_table=11 NZ_CP047492.1 RefSeq gene 964874 965794 . - . ID=gene-IXO1104_RS04425;Name=IXO1104_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04425;old_locus_tag=IXO1104_04395 NZ_CP047492.1 Protein Homology CDS 964874 965794 . - 0 ID=cds-WP_011257796.1;Parent=gene-IXO1104_RS04425;Dbxref=Genbank:WP_011257796.1;Name=WP_011257796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967748.1;locus_tag=IXO1104_RS04425;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_011257796.1;transl_table=11 NZ_CP047492.1 RefSeq gene 965871 967187 . + . ID=gene-IXO1104_RS04430;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS04430;old_locus_tag=IXO1104_04400 NZ_CP047492.1 Protein Homology CDS 965871 967187 . + 0 ID=cds-WP_011257797.1;Parent=gene-IXO1104_RS04430;Dbxref=Genbank:WP_011257797.1;Name=WP_011257797.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573684.1;locus_tag=IXO1104_RS04430;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_011257797.1;transl_table=11 NZ_CP047492.1 RefSeq gene 967460 968839 . - . ID=gene-IXO1104_RS04435;Name=IXO1104_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04435;old_locus_tag=IXO1104_04405 NZ_CP047492.1 Protein Homology CDS 967460 968839 . - 0 ID=cds-WP_011257798.1;Parent=gene-IXO1104_RS04435;Dbxref=Genbank:WP_011257798.1;Name=WP_011257798.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364366.1;locus_tag=IXO1104_RS04435;product=TolC family outer membrane protein;protein_id=WP_011257798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 968860 969516 . - . ID=gene-IXO1104_RS04440;Name=IXO1104_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04440;old_locus_tag=IXO1104_04410 NZ_CP047492.1 Protein Homology CDS 968860 969516 . - 0 ID=cds-WP_011407686.1;Parent=gene-IXO1104_RS04440;Dbxref=Genbank:WP_011407686.1;Name=WP_011407686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804883.1;locus_tag=IXO1104_RS04440;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_011407686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 969645 970298 . - . ID=gene-IXO1104_RS04445;Name=IXO1104_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04445;old_locus_tag=IXO1104_04415 NZ_CP047492.1 Protein Homology CDS 969645 970298 . - 0 ID=cds-WP_011257800.1;Parent=gene-IXO1104_RS04445;Dbxref=Genbank:WP_011257800.1;Name=WP_011257800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167389.1;locus_tag=IXO1104_RS04445;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011257800.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 970517 971026 . + . ID=gene-IXO1104_RS04450;Name=IXO1104_RS04450;end_range=971026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04450;old_locus_tag=IXO1104_04420;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 970517 971026 . + 0 ID=cds-IXO1104_RS04450;Parent=gene-IXO1104_RS04450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=971026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967738.1;locus_tag=IXO1104_RS04450;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 971198 972163 . - . ID=gene-IXO1104_RS04455;Name=IXO1104_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04455;old_locus_tag=IXO1104_04425 NZ_CP047492.1 Protein Homology CDS 971198 972163 . - 0 ID=cds-WP_263109017.1;Parent=gene-IXO1104_RS04455;Dbxref=Genbank:WP_263109017.1;Name=WP_263109017.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04455;product=IS1595-like element ISXo5 family transposase;protein_id=WP_263109017.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 972253 972910 . + . ID=gene-IXO1104_RS04460;Name=IXO1104_RS04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04460;old_locus_tag=IXO1104_04430;partial=true;pseudo=true;start_range=.,972253 NZ_CP047492.1 Protein Homology CDS 972253 972910 . + 0 ID=cds-IXO1104_RS04460;Parent=gene-IXO1104_RS04460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967738.1;locus_tag=IXO1104_RS04460;partial=true;product=GGDEF domain-containing protein;pseudo=true;start_range=.,972253;transl_table=11 NZ_CP047492.1 RefSeq gene 973155 974039 . - . ID=gene-IXO1104_RS04465;Name=IXO1104_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04465;old_locus_tag=IXO1104_04435 NZ_CP047492.1 Protein Homology CDS 973155 974039 . - 0 ID=cds-WP_027703665.1;Parent=gene-IXO1104_RS04465;Dbxref=Genbank:WP_027703665.1;Name=WP_027703665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849465.1;locus_tag=IXO1104_RS04465;product=LysR family transcriptional regulator;protein_id=WP_027703665.1;transl_table=11 NZ_CP047492.1 RefSeq gene 974160 975608 . + . ID=gene-IXO1104_RS04470;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04470;old_locus_tag=IXO1104_04440 NZ_CP047492.1 Protein Homology CDS 974160 975608 . + 0 ID=cds-WP_011257806.1;Parent=gene-IXO1104_RS04470;Dbxref=Genbank:WP_011257806.1;Name=WP_011257806.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091005.1;locus_tag=IXO1104_RS04470;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_011257806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 975676 976323 . + . ID=gene-IXO1104_RS04475;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=IXO1104_RS04475;old_locus_tag=IXO1104_04445 NZ_CP047492.1 Protein Homology CDS 975676 976323 . + 0 ID=cds-WP_011257807.1;Parent=gene-IXO1104_RS04475;Dbxref=Genbank:WP_011257807.1;Name=WP_011257807.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301096.1;locus_tag=IXO1104_RS04475;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_011257807.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 976320 977103 . + . ID=gene-IXO1104_RS04480;Name=IXO1104_RS04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04480;old_locus_tag=IXO1104_04450;pseudo=true NZ_CP047492.1 Protein Homology CDS 976320 977103 . + 0 ID=cds-IXO1104_RS04480;Parent=gene-IXO1104_RS04480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446015.1;locus_tag=IXO1104_RS04480;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 977140 978213 . + . ID=gene-IXO1104_RS04485;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=IXO1104_RS04485;old_locus_tag=IXO1104_04455 NZ_CP047492.1 Protein Homology CDS 977140 978213 . + 0 ID=cds-WP_075240515.1;Parent=gene-IXO1104_RS04485;Dbxref=Genbank:WP_075240515.1;Name=WP_075240515.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912018.1;locus_tag=IXO1104_RS04485;product=3-isopropylmalate dehydrogenase;protein_id=WP_075240515.1;transl_table=11 NZ_CP047492.1 RefSeq gene 978544 980106 . - . ID=gene-IXO1104_RS04490;Name=IXO1104_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04490;old_locus_tag=IXO1104_04460 NZ_CP047492.1 Protein Homology CDS 978544 980106 . - 0 ID=cds-WP_011407690.1;Parent=gene-IXO1104_RS04490;Dbxref=Genbank:WP_011407690.1;Name=WP_011407690.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156818.1;locus_tag=IXO1104_RS04490;product=2-isopropylmalate synthase;protein_id=WP_011407690.1;transl_table=11 NZ_CP047492.1 RefSeq gene 980103 981173 . - . ID=gene-IXO1104_RS04495;Name=IXO1104_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04495;old_locus_tag=IXO1104_04465 NZ_CP047492.1 Protein Homology CDS 980103 981173 . - 0 ID=cds-WP_012446012.1;Parent=gene-IXO1104_RS04495;Dbxref=Genbank:WP_012446012.1;Name=WP_012446012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912014.1;locus_tag=IXO1104_RS04495;product=threonine dehydratase;protein_id=WP_012446012.1;transl_table=11 NZ_CP047492.1 RefSeq gene 981303 981560 . - . ID=gene-IXO1104_RS04500;Name=IXO1104_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04500;old_locus_tag=IXO1104_04470 NZ_CP047492.1 Protein Homology CDS 981303 981560 . - 0 ID=cds-WP_011257810.1;Parent=gene-IXO1104_RS04500;Dbxref=Genbank:WP_011257810.1;Name=WP_011257810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504505.1;locus_tag=IXO1104_RS04500;product=acetolactate synthase;protein_id=WP_011257810.1;transl_table=11 NZ_CP047492.1 RefSeq gene 981544 983265 . - . ID=gene-IXO1104_RS04505;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=IXO1104_RS04505;old_locus_tag=IXO1104_04475 NZ_CP047492.1 Protein Homology CDS 981544 983265 . - 0 ID=cds-WP_011257811.1;Parent=gene-IXO1104_RS04505;Dbxref=Genbank:WP_011257811.1;Name=WP_011257811.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804901.1;locus_tag=IXO1104_RS04505;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_011257811.1;transl_table=11 NZ_CP047492.1 RefSeq gene 983309 984310 . - . ID=gene-IXO1104_RS04510;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04510;old_locus_tag=IXO1104_04480 NZ_CP047492.1 Protein Homology CDS 983309 984310 . - 0 ID=cds-WP_011257812.1;Parent=gene-IXO1104_RS04510;Dbxref=Genbank:WP_011257812.1;Name=WP_011257812.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504503.1;locus_tag=IXO1104_RS04510;product=ketol-acid reductoisomerase;protein_id=WP_011257812.1;transl_table=11 NZ_CP047492.1 RefSeq gene 985005 985081 . + . ID=gene-IXO1104_RS04515;Name=IXO1104_RS04515;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04515;old_locus_tag=IXO1104_04485 NZ_CP047492.1 cmsearch ncRNA 985005 985081 . + . ID=rna-IXO1104_RS04515;Parent=gene-IXO1104_RS04515;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04515;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 985005 985081 . + . ID=exon-IXO1104_RS04515-1;Parent=rna-IXO1104_RS04515;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04515;product=sX9 sRNA NZ_CP047492.1 cmsearch riboswitch 985398 985495 . + . ID=id-NZ_CP047492.1:985398..985495;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 985587 987464 . + . ID=gene-IXO1104_RS04520;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04520;old_locus_tag=IXO1104_04490 NZ_CP047492.1 Protein Homology CDS 985587 987464 . + 0 ID=cds-WP_011407693.1;Parent=gene-IXO1104_RS04520;Dbxref=Genbank:WP_011407693.1;Name=WP_011407693.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407693.1;locus_tag=IXO1104_RS04520;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_011407693.1;transl_table=11 NZ_CP047492.1 RefSeq gene 987890 990241 . + . ID=gene-IXO1104_RS04525;Name=IXO1104_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04525;old_locus_tag=IXO1104_04495 NZ_CP047492.1 Protein Homology CDS 987890 990241 . + 0 ID=cds-WP_041182781.1;Parent=gene-IXO1104_RS04525;Dbxref=Genbank:WP_041182781.1;Name=WP_041182781.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364401.1;locus_tag=IXO1104_RS04525;product=winged helix-turn-helix domain-containing protein;protein_id=WP_041182781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 990352 991245 . + . ID=gene-IXO1104_RS04530;Name=IXO1104_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04530;old_locus_tag=IXO1104_04500 NZ_CP047492.1 Protein Homology CDS 990352 991245 . + 0 ID=cds-WP_011407695.1;Parent=gene-IXO1104_RS04530;Dbxref=Genbank:WP_011407695.1;Name=WP_011407695.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573718.1;locus_tag=IXO1104_RS04530;product=helix-turn-helix domain-containing protein;protein_id=WP_011407695.1;transl_table=11 NZ_CP047492.1 RefSeq gene 991294 994260 . + . ID=gene-IXO1104_RS04535;Name=IXO1104_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04535;old_locus_tag=IXO1104_04505 NZ_CP047492.1 Protein Homology CDS 991294 994260 . + 0 ID=cds-WP_027703666.1;Parent=gene-IXO1104_RS04535;Dbxref=Genbank:WP_027703666.1;Name=WP_027703666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990845.1;locus_tag=IXO1104_RS04535;product=TonB-dependent receptor;protein_id=WP_027703666.1;transl_table=11 NZ_CP047492.1 RefSeq gene 994358 994434 . - . ID=gene-IXO1104_RS04540;Name=IXO1104_RS04540;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04540;old_locus_tag=IXO1104_04510 NZ_CP047492.1 cmsearch ncRNA 994358 994434 . - . ID=rna-IXO1104_RS04540;Parent=gene-IXO1104_RS04540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04540;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 994358 994434 . - . ID=exon-IXO1104_RS04540-1;Parent=rna-IXO1104_RS04540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04540;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 994875 996023 . - . ID=gene-IXO1104_RS04545;Name=IXO1104_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04545;old_locus_tag=IXO1104_04515 NZ_CP047492.1 Protein Homology CDS 994875 996023 . - 0 ID=cds-WP_011257817.1;Parent=gene-IXO1104_RS04545;Dbxref=Genbank:WP_011257817.1;Name=WP_011257817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504498.1;locus_tag=IXO1104_RS04545;product=HDOD domain-containing protein;protein_id=WP_011257817.1;transl_table=11 NZ_CP047492.1 RefSeq gene 996137 996673 . - . ID=gene-IXO1104_RS04550;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=IXO1104_RS04550;old_locus_tag=IXO1104_04520 NZ_CP047492.1 Protein Homology CDS 996137 996673 . - 0 ID=cds-WP_011257818.1;Parent=gene-IXO1104_RS04550;Dbxref=Genbank:WP_011257818.1;Name=WP_011257818.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483319.1;locus_tag=IXO1104_RS04550;product=inorganic diphosphatase;protein_id=WP_011257818.1;transl_table=11 NZ_CP047492.1 RefSeq gene 996870 997352 . + . ID=gene-IXO1104_RS04555;Name=IXO1104_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04555;old_locus_tag=IXO1104_04525 NZ_CP047492.1 Protein Homology CDS 996870 997352 . + 0 ID=cds-WP_011407697.1;Parent=gene-IXO1104_RS04555;Dbxref=Genbank:WP_011407697.1;Name=WP_011407697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158947.1;locus_tag=IXO1104_RS04555;product=hypothetical protein;protein_id=WP_011407697.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 997645 999534 . - . ID=gene-IXO1104_RS04560;Name=IXO1104_RS04560;end_range=999534,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04560;old_locus_tag=IXO1104_04530;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 997645 999534 . - 0 ID=cds-IXO1104_RS04560;Parent=gene-IXO1104_RS04560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:1902600,GO:0009678;end_range=999534,.;gbkey=CDS;go_function=pyrophosphate hydrolysis-driven proton transmembrane transporter activity|0009678||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038412.1;locus_tag=IXO1104_RS04560;partial=true;product=sodium-translocating pyrophosphatase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 999600 1000556 . + . ID=gene-IXO1104_RS04565;Name=IXO1104_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04565;old_locus_tag=IXO1104_04535 NZ_CP047492.1 Protein Homology CDS 999600 1000556 . + 0 ID=cds-WP_133265471.1;Parent=gene-IXO1104_RS04565;Dbxref=Genbank:WP_133265471.1;Name=WP_133265471.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04565;product=IS1595 family transposase;protein_id=WP_133265471.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1000553 1000729 . - . ID=gene-IXO1104_RS04570;Name=IXO1104_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04570;old_locus_tag=IXO1104_04540 NZ_CP047492.1 Protein Homology CDS 1000553 1000729 . - 0 ID=cds-WP_187359573.1;Parent=gene-IXO1104_RS04570;Dbxref=Genbank:WP_187359573.1;Name=WP_187359573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015019.2;locus_tag=IXO1104_RS04570;product=sodium/proton-translocating pyrophosphatase;protein_id=WP_187359573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1000978 1001502 . + . ID=gene-IXO1104_RS04575;Name=IXO1104_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04575;old_locus_tag=IXO1104_04545 NZ_CP047492.1 Protein Homology CDS 1000978 1001502 . + 0 ID=cds-WP_011257823.1;Parent=gene-IXO1104_RS04575;Dbxref=Genbank:WP_011257823.1;Name=WP_011257823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348509.1;locus_tag=IXO1104_RS04575;product=hypothetical protein;protein_id=WP_011257823.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1001646 1002611 . - . ID=gene-IXO1104_RS04580;Name=IXO1104_RS04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04580;old_locus_tag=IXO1104_04550;pseudo=true NZ_CP047492.1 Protein Homology CDS 1001646 1002611 . - 0 ID=cds-IXO1104_RS04580;Parent=gene-IXO1104_RS04580;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04580;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1002700 1002891 . - . ID=gene-IXO1104_RS04585;Name=IXO1104_RS04585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04585;old_locus_tag=IXO1104_04555;partial=true;pseudo=true;start_range=.,1002700 NZ_CP047492.1 Protein Homology CDS 1002700 1002891 . - 0 ID=cds-IXO1104_RS04585;Parent=gene-IXO1104_RS04585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04585;partial=true;product=transposase;pseudo=true;start_range=.,1002700;transl_table=11 NZ_CP047492.1 RefSeq gene 1003182 1004438 . - . ID=gene-IXO1104_RS04590;Name=IXO1104_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04590;old_locus_tag=IXO1104_04560 NZ_CP047492.1 Protein Homology CDS 1003182 1004438 . - 0 ID=cds-WP_011257827.1;Parent=gene-IXO1104_RS04590;Dbxref=Genbank:WP_011257827.1;Name=WP_011257827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504490.1;locus_tag=IXO1104_RS04590;product=6-phosphofructokinase;protein_id=WP_011257827.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1004598 1005161 . + . ID=gene-IXO1104_RS04595;Name=IXO1104_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04595;old_locus_tag=IXO1104_04565 NZ_CP047492.1 Protein Homology CDS 1004598 1005161 . + 0 ID=cds-WP_011257828.1;Parent=gene-IXO1104_RS04595;Dbxref=Genbank:WP_011257828.1;Name=WP_011257828.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364422.1;locus_tag=IXO1104_RS04595;product=adenylate kinase;protein_id=WP_011257828.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1005519 1006886 . + . ID=gene-IXO1104_RS04600;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=IXO1104_RS04600;old_locus_tag=IXO1104_04570 NZ_CP047492.1 Protein Homology CDS 1005519 1006886 . + 0 ID=cds-WP_178380587.1;Parent=gene-IXO1104_RS04600;Dbxref=Genbank:WP_178380587.1;Name=WP_178380587.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164849.1;locus_tag=IXO1104_RS04600;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_178380587.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1006886 1007482 . + . ID=gene-IXO1104_RS04605;Name=IXO1104_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04605;old_locus_tag=IXO1104_04575 NZ_CP047492.1 Protein Homology CDS 1006886 1007482 . + 0 ID=cds-WP_053501459.1;Parent=gene-IXO1104_RS04605;Dbxref=Genbank:WP_053501459.1;Name=WP_053501459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305271.1;locus_tag=IXO1104_RS04605;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_053501459.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1007629 1008513 . + . ID=gene-IXO1104_RS04610;Name=IXO1104_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04610;old_locus_tag=IXO1104_04580 NZ_CP047492.1 Protein Homology CDS 1007629 1008513 . + 0 ID=cds-WP_011257831.1;Parent=gene-IXO1104_RS04610;Dbxref=Genbank:WP_011257831.1;Name=WP_011257831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364428.1;locus_tag=IXO1104_RS04610;product=membrane protein;protein_id=WP_011257831.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1008901 1009476 . - . ID=gene-IXO1104_RS04615;Name=IXO1104_RS04615;end_range=1009476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04615;old_locus_tag=IXO1104_04585;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1008901 1009476 . - 0 ID=cds-IXO1104_RS04615;Parent=gene-IXO1104_RS04615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1009476,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04615;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1009486 1010284 . - . ID=gene-IXO1104_RS04620;Name=IXO1104_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04620;old_locus_tag=IXO1104_04590 NZ_CP047492.1 Protein Homology CDS 1010013 1010284 . - 0 ID=cds-WP_099051302.1;Parent=gene-IXO1104_RS04620;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04620;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1009486 1010014 . - 1 ID=cds-WP_099051302.1;Parent=gene-IXO1104_RS04620;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04620;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1010331 1011554 . + . ID=gene-IXO1104_RS04625;Name=IXO1104_RS04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04625;old_locus_tag=IXO1104_04595;partial=true;pseudo=true;start_range=.,1010331 NZ_CP047492.1 Protein Homology CDS 1010331 1011554 . + 0 ID=cds-IXO1104_RS04625;Parent=gene-IXO1104_RS04625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04625;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1010331;transl_table=11 NZ_CP047492.1 RefSeq gene 1011722 1012485 . - . ID=gene-IXO1104_RS04630;Name=IXO1104_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04630;old_locus_tag=IXO1104_04600 NZ_CP047492.1 Protein Homology CDS 1012170 1012485 . - 0 ID=cds-WP_094187771.1;Parent=gene-IXO1104_RS04630;Dbxref=Genbank:WP_094187771.1;Name=WP_094187771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04630;product=IS5 family transposase;protein_id=WP_094187771.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1011722 1012170 . - 2 ID=cds-WP_094187771.1;Parent=gene-IXO1104_RS04630;Dbxref=Genbank:WP_094187771.1;Name=WP_094187771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04630;product=IS5 family transposase;protein_id=WP_094187771.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1012496 1013677 . - . ID=gene-IXO1104_RS04635;Name=IXO1104_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04635;old_locus_tag=IXO1104_04605 NZ_CP047492.1 Protein Homology CDS 1012496 1013677 . - 0 ID=cds-WP_164994103.1;Parent=gene-IXO1104_RS04635;Dbxref=Genbank:WP_164994103.1;Name=WP_164994103.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1;locus_tag=IXO1104_RS04635;product=IS4 family transposase;protein_id=WP_164994103.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1013744 1014507 . + . ID=gene-IXO1104_RS04640;Name=IXO1104_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04640;old_locus_tag=IXO1104_04610 NZ_CP047492.1 Protein Homology CDS 1013744 1014059 . + 0 ID=cds-WP_164994104.1;Parent=gene-IXO1104_RS04640;Dbxref=Genbank:WP_164994104.1;Name=WP_164994104.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04640;product=IS5 family transposase;protein_id=WP_164994104.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1014059 1014507 . + 2 ID=cds-WP_164994104.1;Parent=gene-IXO1104_RS04640;Dbxref=Genbank:WP_164994104.1;Name=WP_164994104.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04640;product=IS5 family transposase;protein_id=WP_164994104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1014575 1016125 . - . ID=gene-IXO1104_RS04645;Name=IXO1104_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04645;old_locus_tag=IXO1104_04615 NZ_CP047492.1 Protein Homology CDS 1014575 1016125 . - 0 ID=cds-WP_012445996.1;Parent=gene-IXO1104_RS04645;Dbxref=Genbank:WP_012445996.1;Name=WP_012445996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445996.1;locus_tag=IXO1104_RS04645;product=hypothetical protein;protein_id=WP_012445996.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1016454 1017419 . - . ID=gene-IXO1104_RS04650;Name=IXO1104_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04650;old_locus_tag=IXO1104_04620 NZ_CP047492.1 Protein Homology CDS 1016454 1017419 . - 0 ID=cds-WP_115877379.1;Parent=gene-IXO1104_RS04650;Dbxref=Genbank:WP_115877379.1;Name=WP_115877379.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04650;product=IS1595 family transposase;protein_id=WP_115877379.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1017508 1018271 . - . ID=gene-IXO1104_RS04655;Name=IXO1104_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04655;old_locus_tag=IXO1104_04625 NZ_CP047492.1 Protein Homology CDS 1017956 1018271 . - 0 ID=cds-WP_094187736.1-2;Parent=gene-IXO1104_RS04655;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04655;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1017508 1017956 . - 2 ID=cds-WP_094187736.1-2;Parent=gene-IXO1104_RS04655;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04655;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1018427 1019194 . + . ID=gene-IXO1104_RS04660;Name=IXO1104_RS04660;end_range=1019194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04660;old_locus_tag=IXO1104_04630;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1018427 1019194 . + 0 ID=cds-IXO1104_RS04660;Parent=gene-IXO1104_RS04660;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;end_range=1019194,.;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162738.1;locus_tag=IXO1104_RS04660;partial=true;product=pseudouridine synthase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1019268 1020587 . + . ID=gene-IXO1104_RS04665;Name=IXO1104_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04665;old_locus_tag=IXO1104_04635 NZ_CP047492.1 Protein Homology CDS 1019268 1020587 . + 0 ID=cds-WP_109182069.1-2;Parent=gene-IXO1104_RS04665;Dbxref=Genbank:WP_109182069.1;Name=WP_109182069.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04665;product=IS701 family transposase;protein_id=WP_109182069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1020683 1021481 . - . ID=gene-IXO1104_RS04670;Name=IXO1104_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04670;old_locus_tag=IXO1104_04640 NZ_CP047492.1 Protein Homology CDS 1021210 1021481 . - 0 ID=cds-WP_094187763.1;Parent=gene-IXO1104_RS04670;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04670;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1020683 1021211 . - 1 ID=cds-WP_094187763.1;Parent=gene-IXO1104_RS04670;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04670;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1021527 1021652 . + . ID=gene-IXO1104_RS04675;Name=IXO1104_RS04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04675;old_locus_tag=IXO1104_04645;partial=true;pseudo=true;start_range=.,1021527 NZ_CP047492.1 Protein Homology CDS 1021527 1021652 . + 0 ID=cds-IXO1104_RS04675;Parent=gene-IXO1104_RS04675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997018.1;locus_tag=IXO1104_RS04675;partial=true;product=pseudouridylate synthase;pseudo=true;start_range=.,1021527;transl_table=11 NZ_CP047492.1 RefSeq gene 1021669 1022592 . - . ID=gene-IXO1104_RS04680;Name=IXO1104_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04680;old_locus_tag=IXO1104_04650 NZ_CP047492.1 Protein Homology CDS 1021669 1022592 . - 0 ID=cds-WP_041182948.1;Parent=gene-IXO1104_RS04680;Dbxref=Genbank:WP_041182948.1;Name=WP_041182948.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505222.1;locus_tag=IXO1104_RS04680;product=IS30 family transposase;protein_id=WP_041182948.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1022677 1023182 . + . ID=gene-IXO1104_RS04685;Name=IXO1104_RS04685;end_range=1023182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04685;old_locus_tag=IXO1104_04655;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1022677 1023182 . + 0 ID=cds-IXO1104_RS04685;Parent=gene-IXO1104_RS04685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1023182,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=IXO1104_RS04685;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1023337 1024656 . + . ID=gene-IXO1104_RS04690;Name=IXO1104_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04690;old_locus_tag=IXO1104_04660 NZ_CP047492.1 Protein Homology CDS 1023337 1024656 . + 0 ID=cds-WP_164994105.1;Parent=gene-IXO1104_RS04690;Dbxref=Genbank:WP_164994105.1;Name=WP_164994105.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04690;product=IS701 family transposase;protein_id=WP_164994105.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1024766 1025839 . + . ID=gene-IXO1104_RS04695;Name=IXO1104_RS04695;end_range=1025839,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04695;old_locus_tag=IXO1104_04665;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1024766 1025839 . + 0 ID=cds-IXO1104_RS04695;Parent=gene-IXO1104_RS04695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1025839,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS04695;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1025848 1026822 . - . ID=gene-IXO1104_RS04700;Name=IXO1104_RS04700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04700;old_locus_tag=IXO1104_04670;pseudo=true NZ_CP047492.1 Protein Homology CDS 1025848 1026822 . - 0 ID=cds-IXO1104_RS04700;Parent=gene-IXO1104_RS04700;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557986.1;locus_tag=IXO1104_RS04700;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1026946 1027911 . + . ID=gene-IXO1104_RS04705;Name=IXO1104_RS04705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04705;old_locus_tag=IXO1104_04675;pseudo=true NZ_CP047492.1 Protein Homology CDS 1026946 1027911 . + 0 ID=cds-IXO1104_RS04705;Parent=gene-IXO1104_RS04705;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS04705;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1027981 1028286 . + . ID=gene-IXO1104_RS04710;Name=IXO1104_RS04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04710;old_locus_tag=IXO1104_04680;partial=true;pseudo=true;start_range=.,1027981 NZ_CP047492.1 Protein Homology CDS 1027981 1028286 . + 0 ID=cds-IXO1104_RS04710;Parent=gene-IXO1104_RS04710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS04710;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1027981;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1028308 1028859 . + . ID=gene-IXO1104_RS04715;Name=IXO1104_RS04715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04715;old_locus_tag=IXO1104_04685;partial=true;pseudo=true;start_range=.,1028308 NZ_CP047492.1 Protein Homology CDS 1028308 1028859 . + 0 ID=cds-IXO1104_RS04715;Parent=gene-IXO1104_RS04715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1104_RS04715;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1028308;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1029053 1029254 . + . ID=gene-IXO1104_RS04720;Name=IXO1104_RS04720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04720;old_locus_tag=IXO1104_04690;partial=true;pseudo=true;start_range=.,1029053 NZ_CP047492.1 Protein Homology CDS 1029053 1029254 . + 0 ID=cds-IXO1104_RS04720;Parent=gene-IXO1104_RS04720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS04720;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1029053;transl_table=11 NZ_CP047492.1 RefSeq gene 1029251 1030234 . + . ID=gene-IXO1104_RS04725;Name=IXO1104_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04725;old_locus_tag=IXO1104_04695 NZ_CP047492.1 Protein Homology CDS 1029251 1030234 . + 0 ID=cds-WP_012445985.1;Parent=gene-IXO1104_RS04725;Dbxref=Genbank:WP_012445985.1;Name=WP_012445985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901112.1;locus_tag=IXO1104_RS04725;product=trypsin-like serine protease;protein_id=WP_012445985.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1030261 1030833 . - . ID=gene-IXO1104_RS04730;Name=IXO1104_RS04730;end_range=1030833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04730;old_locus_tag=IXO1104_04700;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1030261 1030833 . - 0 ID=cds-IXO1104_RS04730;Parent=gene-IXO1104_RS04730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1030833,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1104_RS04730;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1030848 1032083 . - . ID=gene-IXO1104_RS04735;Name=IXO1104_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04735;old_locus_tag=IXO1104_04705 NZ_CP047492.1 Protein Homology CDS 1030848 1032083 . - 0 ID=cds-WP_011257854.1;Parent=gene-IXO1104_RS04735;Dbxref=Genbank:WP_011257854.1;Name=WP_011257854.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS04735;product=ISL3 family transposase;protein_id=WP_011257854.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1032145 1032564 . - . ID=gene-IXO1104_RS04740;Name=IXO1104_RS04740;end_range=1032564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04740;old_locus_tag=IXO1104_04710;partial=true;pseudo=true;start_range=.,1032145 NZ_CP047492.1 Protein Homology CDS 1032145 1032564 . - 0 ID=cds-IXO1104_RS04740;Parent=gene-IXO1104_RS04740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1032564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS04740;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1032145;transl_table=11 NZ_CP047492.1 RefSeq gene 1032598 1033640 . - . ID=gene-IXO1104_RS04745;Name=IXO1104_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04745;old_locus_tag=IXO1104_04715 NZ_CP047492.1 Protein Homology CDS 1033445 1033640 . - 0 ID=cds-WP_263117930.1;Parent=gene-IXO1104_RS04745;Dbxref=Genbank:WP_263117930.1;Name=WP_263117930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS04745;product=IS3 family transposase;protein_id=WP_263117930.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1032598 1033445 . - 2 ID=cds-WP_263117930.1;Parent=gene-IXO1104_RS04745;Dbxref=Genbank:WP_263117930.1;Name=WP_263117930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS04745;product=IS3 family transposase;protein_id=WP_263117930.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1033764 1034153 . - . ID=gene-IXO1104_RS04750;Name=IXO1104_RS04750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04750;old_locus_tag=IXO1104_04720;partial=true;pseudo=true;start_range=.,1033764 NZ_CP047492.1 Protein Homology CDS 1033764 1034153 . - 0 ID=cds-IXO1104_RS04750;Parent=gene-IXO1104_RS04750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS04750;partial=true;product=transposase;pseudo=true;start_range=.,1033764;transl_table=11 NZ_CP047492.1 RefSeq gene 1034406 1034924 . + . ID=gene-IXO1104_RS04755;Name=IXO1104_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04755;old_locus_tag=IXO1104_04725 NZ_CP047492.1 Protein Homology CDS 1034406 1034924 . + 0 ID=cds-WP_011407706.1;Parent=gene-IXO1104_RS04755;Dbxref=Genbank:WP_011407706.1;Name=WP_011407706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993394.1;locus_tag=IXO1104_RS04755;product=disulfide bond formation protein B;protein_id=WP_011407706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1035453 1037576 . - . ID=gene-IXO1104_RS04760;Name=IXO1104_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04760;old_locus_tag=IXO1104_04730 NZ_CP047492.1 Protein Homology CDS 1035453 1037576 . - 0 ID=cds-WP_075240541.1;Parent=gene-IXO1104_RS04760;Dbxref=Genbank:WP_075240541.1;Name=WP_075240541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089489.1;locus_tag=IXO1104_RS04760;product=TonB-dependent receptor;protein_id=WP_075240541.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1037824 1039206 . + . ID=gene-IXO1104_RS04765;Name=IXO1104_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04765;old_locus_tag=IXO1104_04735 NZ_CP047492.1 Protein Homology CDS 1037824 1039206 . + 0 ID=cds-WP_011257841.1;Parent=gene-IXO1104_RS04765;Dbxref=Genbank:WP_011257841.1;Name=WP_011257841.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257841.1;locus_tag=IXO1104_RS04765;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=WP_011257841.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1039307 1040434 . + . ID=gene-IXO1104_RS04770;Name=IXO1104_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04770;old_locus_tag=IXO1104_04740 NZ_CP047492.1 Protein Homology CDS 1039307 1040434 . + 0 ID=cds-WP_011257840.1;Parent=gene-IXO1104_RS04770;Dbxref=Genbank:WP_011257840.1;Name=WP_011257840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156225.1;locus_tag=IXO1104_RS04770;product=mechanosensitive ion channel;protein_id=WP_011257840.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1040585 1041253 . - . ID=gene-IXO1104_RS04775;Name=IXO1104_RS04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04775;old_locus_tag=IXO1104_04745;partial=true;pseudo=true;start_range=.,1040585 NZ_CP047492.1 Protein Homology CDS 1040585 1041253 . - 0 ID=cds-IXO1104_RS04775;Parent=gene-IXO1104_RS04775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156226.1;locus_tag=IXO1104_RS04775;partial=true;product=amidase family protein;pseudo=true;start_range=.,1040585;transl_table=11 NZ_CP047492.1 RefSeq gene 1041357 1041776 . - . ID=gene-IXO1104_RS04780;Name=IXO1104_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04780;old_locus_tag=IXO1104_04750 NZ_CP047492.1 Protein Homology CDS 1041357 1041776 . - 0 ID=cds-WP_178385173.1;Parent=gene-IXO1104_RS04780;Dbxref=Genbank:WP_178385173.1;Name=WP_178385173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161510.1;locus_tag=IXO1104_RS04780;product=DUF2127 domain-containing protein;protein_id=WP_178385173.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1041846 1043675 . - . ID=gene-IXO1104_RS04785;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=IXO1104_RS04785;old_locus_tag=IXO1104_04755 NZ_CP047492.1 Protein Homology CDS 1041846 1043675 . - 0 ID=cds-WP_011257837.1;Parent=gene-IXO1104_RS04785;Dbxref=Genbank:WP_011257837.1;Name=WP_011257837.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904579.1;locus_tag=IXO1104_RS04785;product=translational GTPase TypA;protein_id=WP_011257837.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1043919 1044413 . + . ID=gene-IXO1104_RS04790;Name=IXO1104_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04790;old_locus_tag=IXO1104_04760 NZ_CP047492.1 Protein Homology CDS 1043919 1044413 . + 0 ID=cds-WP_014502175.1;Parent=gene-IXO1104_RS04790;Dbxref=Genbank:WP_014502175.1;Name=WP_014502175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993409.1;locus_tag=IXO1104_RS04790;product=peptidylprolyl isomerase;protein_id=WP_014502175.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1044529 1045515 . + . ID=gene-IXO1104_RS04795;Name=IXO1104_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04795;old_locus_tag=IXO1104_04765 NZ_CP047492.1 Protein Homology CDS 1044529 1045515 . + 0 ID=cds-WP_014502176.1;Parent=gene-IXO1104_RS04795;Dbxref=Genbank:WP_014502176.1;Name=WP_014502176.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439107.1;locus_tag=IXO1104_RS04795;product=malate dehydrogenase;protein_id=WP_014502176.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1045599 1046214 . - . ID=gene-IXO1104_RS04800;Name=IXO1104_RS04800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04800;old_locus_tag=IXO1104_04770;pseudo=true NZ_CP047492.1 Protein Homology CDS 1045599 1046214 . - 0 ID=cds-IXO1104_RS04800;Parent=gene-IXO1104_RS04800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486641.1;locus_tag=IXO1104_RS04800;product=glutathione binding-like protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1046456 1047254 . + . ID=gene-IXO1104_RS04805;Name=IXO1104_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04805;old_locus_tag=IXO1104_04775 NZ_CP047492.1 Protein Homology CDS 1046456 1046727 . + 0 ID=cds-WP_164994106.1;Parent=gene-IXO1104_RS04805;Dbxref=Genbank:WP_164994106.1;Name=WP_164994106.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04805;product=IS5 family transposase;protein_id=WP_164994106.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1046726 1047254 . + 1 ID=cds-WP_164994106.1;Parent=gene-IXO1104_RS04805;Dbxref=Genbank:WP_164994106.1;Name=WP_164994106.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS04805;product=IS5 family transposase;protein_id=WP_164994106.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1047404 1048339 . - . ID=gene-IXO1104_RS04810;Name=IXO1104_RS04810;end_range=1048339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04810;old_locus_tag=IXO1104_04780;partial=true;pseudo=true;start_range=.,1047404 NZ_CP047492.1 Protein Homology CDS 1047404 1048339 . - 0 ID=cds-IXO1104_RS04810;Parent=gene-IXO1104_RS04810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1048339,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS04810;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1047404;transl_table=11 NZ_CP047492.1 RefSeq gene 1048359 1049573 . - . ID=gene-IXO1104_RS04815;Name=IXO1104_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04815;old_locus_tag=IXO1104_04785 NZ_CP047492.1 Protein Homology CDS 1048359 1049573 . - 0 ID=cds-WP_011407913.1-4;Parent=gene-IXO1104_RS04815;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS04815;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1049691 1049858 . - . ID=gene-IXO1104_RS04820;Name=IXO1104_RS04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04820;old_locus_tag=IXO1104_04790;partial=true;pseudo=true;start_range=.,1049691 NZ_CP047492.1 Protein Homology CDS 1049691 1049858 . - 0 ID=cds-IXO1104_RS04820;Parent=gene-IXO1104_RS04820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS04820;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1049691;transl_table=11 NZ_CP047492.1 RefSeq gene 1049995 1050963 . - . ID=gene-IXO1104_RS04825;Name=IXO1104_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04825;old_locus_tag=IXO1104_04795 NZ_CP047492.1 Protein Homology CDS 1049995 1050963 . - 0 ID=cds-WP_011258802.1-4;Parent=gene-IXO1104_RS04825;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS04825;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1051224 1051685 . - . ID=gene-IXO1104_RS04830;Name=IXO1104_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04830;old_locus_tag=IXO1104_04800 NZ_CP047492.1 Protein Homology CDS 1051224 1051685 . - 0 ID=cds-WP_011407721.1;Parent=gene-IXO1104_RS04830;Dbxref=Genbank:WP_011407721.1;Name=WP_011407721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470606.1;locus_tag=IXO1104_RS04830;product=cell wall hydrolase;protein_id=WP_011407721.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1052234 1052476 . - . ID=gene-IXO1104_RS04835;Name=IXO1104_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04835;old_locus_tag=IXO1104_04805 NZ_CP047492.1 Protein Homology CDS 1052234 1052476 . - 0 ID=cds-WP_012445975.1;Parent=gene-IXO1104_RS04835;Dbxref=Genbank:WP_012445975.1;Name=WP_012445975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445975.1;locus_tag=IXO1104_RS04835;product=glycerophosphodiester phosphodiesterase;protein_id=WP_012445975.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1052470 1053233 . - . ID=gene-IXO1104_RS04840;Name=IXO1104_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04840;old_locus_tag=IXO1104_04810 NZ_CP047492.1 Protein Homology CDS 1052918 1053233 . - 0 ID=cds-WP_094187715.1-3;Parent=gene-IXO1104_RS04840;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04840;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1052470 1052918 . - 2 ID=cds-WP_094187715.1-3;Parent=gene-IXO1104_RS04840;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS04840;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1053266 1053997 . - . ID=gene-IXO1104_RS04845;Name=IXO1104_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04845;old_locus_tag=IXO1104_04815 NZ_CP047492.1 Protein Homology CDS 1053266 1053997 . - 0 ID=cds-WP_012445973.1;Parent=gene-IXO1104_RS04845;Dbxref=Genbank:WP_012445973.1;Name=WP_012445973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257869.1;locus_tag=IXO1104_RS04845;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_012445973.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1053991 1054512 . - . ID=gene-IXO1104_RS04850;Name=IXO1104_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04850;old_locus_tag=IXO1104_04820 NZ_CP047492.1 GeneMarkS-2+ CDS 1053991 1054512 . - 0 ID=cds-WP_229002650.1;Parent=gene-IXO1104_RS04850;Dbxref=Genbank:WP_229002650.1;Name=WP_229002650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS04850;product=TonB-dependent receptor;protein_id=WP_229002650.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1054425 1055264 . - . ID=gene-IXO1104_RS04855;Name=IXO1104_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04855 NZ_CP047492.1 GeneMarkS-2+ CDS 1054425 1055264 . - 0 ID=cds-WP_229002648.1;Parent=gene-IXO1104_RS04855;Dbxref=Genbank:WP_229002648.1;Name=WP_229002648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS04855;product=hypothetical protein;protein_id=WP_229002648.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1055227 1055868 . - . ID=gene-IXO1104_RS04860;Name=IXO1104_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04860;old_locus_tag=IXO1104_04825 NZ_CP047492.1 Protein Homology CDS 1055227 1055868 . - 0 ID=cds-WP_011409312.1;Parent=gene-IXO1104_RS04860;Dbxref=Genbank:WP_011409312.1;Name=WP_011409312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300708.1;locus_tag=IXO1104_RS04860;product=hypothetical protein;protein_id=WP_011409312.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1055931 1056437 . - . ID=gene-IXO1104_RS04865;Name=IXO1104_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04865;old_locus_tag=IXO1104_04830 NZ_CP047492.1 Protein Homology CDS 1055931 1056437 . - 0 ID=cds-WP_011409311.1;Parent=gene-IXO1104_RS04865;Dbxref=Genbank:WP_011409311.1;Name=WP_011409311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=IXO1104_RS04865;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_011409311.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1056488 1057530 . - . ID=gene-IXO1104_RS04870;Name=IXO1104_RS04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04870;old_locus_tag=IXO1104_04835;pseudo=true NZ_CP047492.1 Protein Homology CDS 1056488 1057530 . - 0 ID=cds-IXO1104_RS04870;Parent=gene-IXO1104_RS04870;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS04870;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1057639 1058946 . - . ID=gene-IXO1104_RS04875;Name=IXO1104_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04875;old_locus_tag=IXO1104_04840 NZ_CP047492.1 Protein Homology CDS 1057639 1058946 . - 0 ID=cds-WP_041182257.1;Parent=gene-IXO1104_RS04875;Dbxref=Genbank:WP_041182257.1;Name=WP_041182257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260131.1;locus_tag=IXO1104_RS04875;product=MFS transporter;protein_id=WP_041182257.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1059108 1061147 . - . ID=gene-IXO1104_RS04880;Name=IXO1104_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04880;old_locus_tag=IXO1104_04845 NZ_CP047492.1 Protein Homology CDS 1059108 1061147 . - 0 ID=cds-WP_012445971.1;Parent=gene-IXO1104_RS04880;Dbxref=Genbank:WP_012445971.1;Name=WP_012445971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300705.1;locus_tag=IXO1104_RS04880;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_012445971.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1061355 1062377 . - . ID=gene-IXO1104_RS04885;Name=IXO1104_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04885;old_locus_tag=IXO1104_04850 NZ_CP047492.1 Protein Homology CDS 1061355 1062377 . - 0 ID=cds-WP_011260129.1;Parent=gene-IXO1104_RS04885;Dbxref=Genbank:WP_011260129.1;Name=WP_011260129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998400.1;locus_tag=IXO1104_RS04885;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_011260129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1062793 1063890 . + . ID=gene-IXO1104_RS04890;Name=IXO1104_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04890;old_locus_tag=IXO1104_04855 NZ_CP047492.1 Protein Homology CDS 1062793 1063890 . + 0 ID=cds-WP_011409308.1;Parent=gene-IXO1104_RS04890;Dbxref=Genbank:WP_011409308.1;Name=WP_011409308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1;locus_tag=IXO1104_RS04890;product=OmpA family protein;protein_id=WP_011409308.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1064083 1064592 . + . ID=gene-IXO1104_RS04895;Name=IXO1104_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04895;old_locus_tag=IXO1104_04860 NZ_CP047492.1 Protein Homology CDS 1064083 1064592 . + 0 ID=cds-WP_014502190.1;Parent=gene-IXO1104_RS04895;Dbxref=Genbank:WP_014502190.1;Name=WP_014502190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156231.1;locus_tag=IXO1104_RS04895;product=hypothetical protein;protein_id=WP_014502190.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1064612 1065472 . + . ID=gene-IXO1104_RS04900;Name=IXO1104_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04900;old_locus_tag=IXO1104_04865 NZ_CP047492.1 Protein Homology CDS 1064612 1065472 . + 0 ID=cds-WP_011260126.1;Parent=gene-IXO1104_RS04900;Dbxref=Genbank:WP_011260126.1;Name=WP_011260126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156232.1;locus_tag=IXO1104_RS04900;product=rRNA pseudouridine synthase;protein_id=WP_011260126.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1065423 1065815 . - . ID=gene-IXO1104_RS04905;Name=IXO1104_RS04905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04905;old_locus_tag=IXO1104_04870;pseudo=true NZ_CP047492.1 Protein Homology CDS 1065423 1065815 . - 0 ID=cds-IXO1104_RS04905;Parent=gene-IXO1104_RS04905;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156233.1;locus_tag=IXO1104_RS04905;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1065818 1067026 . - . ID=gene-IXO1104_RS04910;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=IXO1104_RS04910;old_locus_tag=IXO1104_04875 NZ_CP047492.1 Protein Homology CDS 1065818 1067026 . - 0 ID=cds-WP_011260125.1;Parent=gene-IXO1104_RS04910;Dbxref=Genbank:WP_011260125.1;Name=WP_011260125.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156234.1;locus_tag=IXO1104_RS04910;product=glycine C-acetyltransferase;protein_id=WP_011260125.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1067117 1068214 . + . ID=gene-IXO1104_RS04915;Name=IXO1104_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04915;old_locus_tag=IXO1104_04880 NZ_CP047492.1 Protein Homology CDS 1067117 1068214 . + 0 ID=cds-WP_011260124.1;Parent=gene-IXO1104_RS04915;Dbxref=Genbank:WP_011260124.1;Name=WP_011260124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=IXO1104_RS04915;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_011260124.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1068218 1069078 . + . ID=gene-IXO1104_RS04920;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=IXO1104_RS04920;old_locus_tag=IXO1104_04885 NZ_CP047492.1 Protein Homology CDS 1068218 1069078 . + 0 ID=cds-WP_011260123.1;Parent=gene-IXO1104_RS04920;Dbxref=Genbank:WP_011260123.1;Name=WP_011260123.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysT;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036155.1;locus_tag=IXO1104_RS04920;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_011260123.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1069075 1070028 . + . ID=gene-IXO1104_RS04925;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=IXO1104_RS04925;old_locus_tag=IXO1104_04890 NZ_CP047492.1 Protein Homology CDS 1069075 1070028 . + 0 ID=cds-WP_011260122.1;Parent=gene-IXO1104_RS04925;Dbxref=Genbank:WP_011260122.1;Name=WP_011260122.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysW;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158531.1;locus_tag=IXO1104_RS04925;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_011260122.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1070036 1071070 . + . ID=gene-IXO1104_RS04930;Name=IXO1104_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04930;old_locus_tag=IXO1104_04895 NZ_CP047492.1 Protein Homology CDS 1070036 1071070 . + 0 ID=cds-WP_027703808.1;Parent=gene-IXO1104_RS04930;Dbxref=Genbank:WP_027703808.1;Name=WP_027703808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305108.1;locus_tag=IXO1104_RS04930;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_027703808.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1071424 1072137 . + . ID=gene-IXO1104_RS04935;Name=IXO1104_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04935;old_locus_tag=IXO1104_04900 NZ_CP047492.1 Protein Homology CDS 1071424 1072137 . + 0 ID=cds-WP_011260120.1;Parent=gene-IXO1104_RS04935;Dbxref=Genbank:WP_011260120.1;Name=WP_011260120.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159554.1;locus_tag=IXO1104_RS04935;product=TorF family putative porin;protein_id=WP_011260120.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1072207 1073241 . - . ID=gene-IXO1104_RS04940;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=IXO1104_RS04940;old_locus_tag=IXO1104_04905 NZ_CP047492.1 Protein Homology CDS 1072207 1073241 . - 0 ID=cds-WP_011260119.1;Parent=gene-IXO1104_RS04940;Dbxref=Genbank:WP_011260119.1;Name=WP_011260119.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164734.1;locus_tag=IXO1104_RS04940;product=L-threonine 3-dehydrogenase;protein_id=WP_011260119.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1073744 1076077 . - . ID=gene-IXO1104_RS04945;Name=IXO1104_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04945;old_locus_tag=IXO1104_04910 NZ_CP047492.1 Protein Homology CDS 1073744 1076077 . - 0 ID=cds-WP_012445964.1;Parent=gene-IXO1104_RS04945;Dbxref=Genbank:WP_012445964.1;Name=WP_012445964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571636.1;locus_tag=IXO1104_RS04945;product=TonB-dependent receptor;protein_id=WP_012445964.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1076133 1078122 . + . ID=gene-IXO1104_RS04950;Name=IXO1104_RS04950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS04950;old_locus_tag=IXO1104_04915;partial=true;pseudo=true;start_range=.,1076133 NZ_CP047492.1 Protein Homology CDS 1076133 1078122 . + 0 ID=cds-IXO1104_RS04950;Parent=gene-IXO1104_RS04950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115285.1;locus_tag=IXO1104_RS04950;partial=true;product=phospholipase C%2C phosphocholine-specific;pseudo=true;start_range=.,1076133;transl_table=11 NZ_CP047492.1 RefSeq gene 1078364 1080439 . + . ID=gene-IXO1104_RS04955;Name=IXO1104_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04955;old_locus_tag=IXO1104_04920 NZ_CP047492.1 Protein Homology CDS 1078364 1080439 . + 0 ID=cds-WP_027703644.1;Parent=gene-IXO1104_RS04955;Dbxref=Genbank:WP_027703644.1;Name=WP_027703644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156243.1;locus_tag=IXO1104_RS04955;product=S46 family peptidase;protein_id=WP_027703644.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1080531 1081175 . + . ID=gene-IXO1104_RS04960;Name=IXO1104_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04960;old_locus_tag=IXO1104_04925 NZ_CP047492.1 Protein Homology CDS 1080531 1081175 . + 0 ID=cds-WP_041182256.1;Parent=gene-IXO1104_RS04960;Dbxref=Genbank:WP_041182256.1;Name=WP_041182256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=IXO1104_RS04960;product=histidine phosphatase family protein;protein_id=WP_041182256.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1081888 1081964 . - . ID=gene-IXO1104_RS04965;Name=IXO1104_RS04965;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04965;old_locus_tag=IXO1104_04930 NZ_CP047492.1 cmsearch ncRNA 1081888 1081964 . - . ID=rna-IXO1104_RS04965;Parent=gene-IXO1104_RS04965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04965;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1081888 1081964 . - . ID=exon-IXO1104_RS04965-1;Parent=rna-IXO1104_RS04965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04965;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1082147 1083445 . + . ID=gene-IXO1104_RS04970;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=IXO1104_RS04970;old_locus_tag=IXO1104_04935 NZ_CP047492.1 Protein Homology CDS 1082147 1083445 . + 0 ID=cds-WP_012445958.1;Parent=gene-IXO1104_RS04970;Dbxref=Genbank:WP_012445958.1;Name=WP_012445958.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409300.1;locus_tag=IXO1104_RS04970;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_012445958.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1083513 1084595 . + . ID=gene-IXO1104_RS04975;Name=IXO1104_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04975;old_locus_tag=IXO1104_04940 NZ_CP047492.1 Protein Homology CDS 1083513 1084595 . + 0 ID=cds-WP_027703645.1;Parent=gene-IXO1104_RS04975;Dbxref=Genbank:WP_027703645.1;Name=WP_027703645.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=IXO1104_RS04975;product=SPOR domain-containing protein;protein_id=WP_027703645.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1084810 1085556 . + . ID=gene-IXO1104_RS04980;Name=IXO1104_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04980;old_locus_tag=IXO1104_04945 NZ_CP047492.1 Protein Homology CDS 1084810 1085556 . + 0 ID=cds-WP_011409299.1;Parent=gene-IXO1104_RS04980;Dbxref=Genbank:WP_011409299.1;Name=WP_011409299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301875.1;locus_tag=IXO1104_RS04980;product=CvpA family protein;protein_id=WP_011409299.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1085587 1087053 . + . ID=gene-IXO1104_RS04985;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=IXO1104_RS04985;old_locus_tag=IXO1104_04950 NZ_CP047492.1 Protein Homology CDS 1085587 1087053 . + 0 ID=cds-WP_011409298.1;Parent=gene-IXO1104_RS04985;Dbxref=Genbank:WP_011409298.1;Name=WP_011409298.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806604.1;locus_tag=IXO1104_RS04985;product=amidophosphoribosyltransferase;protein_id=WP_011409298.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1087192 1088016 . + . ID=gene-IXO1104_RS04990;Name=IXO1104_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS04990;old_locus_tag=IXO1104_04955 NZ_CP047492.1 Protein Homology CDS 1087192 1088016 . + 0 ID=cds-WP_069965093.1;Parent=gene-IXO1104_RS04990;Dbxref=Genbank:WP_069965093.1;Name=WP_069965093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115654.1;locus_tag=IXO1104_RS04990;product=ferritin-like domain-containing protein;protein_id=WP_069965093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1088051 1088128 . - . ID=gene-IXO1104_RS04995;Name=IXO1104_RS04995;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS04995;old_locus_tag=IXO1104_04960 NZ_CP047492.1 cmsearch ncRNA 1088051 1088128 . - . ID=rna-IXO1104_RS04995;Parent=gene-IXO1104_RS04995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04995;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1088051 1088128 . - . ID=exon-IXO1104_RS04995-1;Parent=rna-IXO1104_RS04995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS04995;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 1088728 1088853 . + . ID=gene-IXO1104_RS05000;Name=IXO1104_RS05000;end_range=1088853,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05000;old_locus_tag=IXO1104_04965;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1088728 1088853 . + 0 ID=cds-IXO1104_RS05000;Parent=gene-IXO1104_RS05000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1088853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506851.1;locus_tag=IXO1104_RS05000;partial=true;product=peptidyl-Asp metalloendopeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1089120 1089539 . + . ID=gene-IXO1104_RS05005;Name=IXO1104_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05005;old_locus_tag=IXO1104_04970 NZ_CP047492.1 Protein Homology CDS 1089120 1089539 . + 0 ID=cds-WP_011260109.1;Parent=gene-IXO1104_RS05005;Dbxref=Genbank:WP_011260109.1;Name=WP_011260109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368563.1;locus_tag=IXO1104_RS05005;product=hypothetical protein;protein_id=WP_011260109.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1089719 1090462 . - . ID=gene-IXO1104_RS05010;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=IXO1104_RS05010;old_locus_tag=IXO1104_04975 NZ_CP047492.1 Protein Homology CDS 1089719 1090462 . - 0 ID=cds-WP_069970147.1;Parent=gene-IXO1104_RS05010;Dbxref=Genbank:WP_069970147.1;Name=WP_069970147.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439087.1;locus_tag=IXO1104_RS05010;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_069970147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1091110 1091652 . - . ID=gene-IXO1104_RS05015;Name=IXO1104_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05015;old_locus_tag=IXO1104_04980 NZ_CP047492.1 Protein Homology CDS 1091110 1091652 . - 0 ID=cds-WP_011260107.1;Parent=gene-IXO1104_RS05015;Dbxref=Genbank:WP_011260107.1;Name=WP_011260107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409295.1;locus_tag=IXO1104_RS05015;product=phosphatase PAP2 family protein;protein_id=WP_011260107.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1091633 1092769 . - . ID=gene-IXO1104_RS05020;Name=IXO1104_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05020;old_locus_tag=IXO1104_04985 NZ_CP047492.1 Protein Homology CDS 1091633 1092769 . - 0 ID=cds-WP_011260106.1;Parent=gene-IXO1104_RS05020;Dbxref=Genbank:WP_011260106.1;Name=WP_011260106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922250.1;locus_tag=IXO1104_RS05020;product=glycosyltransferase family 1 protein;protein_id=WP_011260106.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1092974 1094494 . - . ID=gene-IXO1104_RS05025;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=IXO1104_RS05025;old_locus_tag=IXO1104_04990 NZ_CP047492.1 Protein Homology CDS 1092974 1094494 . - 0 ID=cds-WP_012445948.1;Parent=gene-IXO1104_RS05025;Dbxref=Genbank:WP_012445948.1;Name=WP_012445948.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304895.1;locus_tag=IXO1104_RS05025;product=exopolyphosphatase;protein_id=WP_012445948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1094672 1096774 . - . ID=gene-IXO1104_RS05030;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=IXO1104_RS05030;old_locus_tag=IXO1104_04995 NZ_CP047492.1 Protein Homology CDS 1094672 1096774 . - 0 ID=cds-WP_011260104.1;Parent=gene-IXO1104_RS05030;Dbxref=Genbank:WP_011260104.1;Name=WP_011260104.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483747.1;locus_tag=IXO1104_RS05030;product=polyphosphate kinase 1;protein_id=WP_011260104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1096890 1098218 . - . ID=gene-IXO1104_RS05035;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=IXO1104_RS05035;old_locus_tag=IXO1104_05000 NZ_CP047492.1 Protein Homology CDS 1096890 1098218 . - 0 ID=cds-WP_012445946.1;Parent=gene-IXO1104_RS05035;Dbxref=Genbank:WP_012445946.1;Name=WP_012445946.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158112.1;locus_tag=IXO1104_RS05035;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_012445946.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1098291 1098980 . - . ID=gene-IXO1104_RS05040;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=IXO1104_RS05040;old_locus_tag=IXO1104_05005 NZ_CP047492.1 Protein Homology CDS 1098291 1098980 . - 0 ID=cds-WP_011260102.1;Parent=gene-IXO1104_RS05040;Dbxref=Genbank:WP_011260102.1;Name=WP_011260102.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806631.1;locus_tag=IXO1104_RS05040;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_011260102.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1099161 1100867 . - . ID=gene-IXO1104_RS05045;Name=IXO1104_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05045;old_locus_tag=IXO1104_05010 NZ_CP047492.1 Protein Homology CDS 1099161 1100867 . - 0 ID=cds-WP_027703647.1;Parent=gene-IXO1104_RS05045;Dbxref=Genbank:WP_027703647.1;Name=WP_027703647.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378377.1;locus_tag=IXO1104_RS05045;product=M48 family metalloprotease;protein_id=WP_027703647.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1100957 1101265 . + . ID=gene-IXO1104_RS05050;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=IXO1104_RS05050;old_locus_tag=IXO1104_05015 NZ_CP047492.1 Protein Homology CDS 1100957 1101265 . + 0 ID=cds-WP_012445944.1;Parent=gene-IXO1104_RS05050;Dbxref=Genbank:WP_012445944.1;Name=WP_012445944.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927845.1;locus_tag=IXO1104_RS05050;product=glutaredoxin 3;protein_id=WP_012445944.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1101262 1101657 . + . ID=gene-IXO1104_RS05055;Name=IXO1104_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05055;old_locus_tag=IXO1104_05020 NZ_CP047492.1 Protein Homology CDS 1101262 1101657 . + 0 ID=cds-WP_012445943.1;Parent=gene-IXO1104_RS05055;Dbxref=Genbank:WP_012445943.1;Name=WP_012445943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483760.1;locus_tag=IXO1104_RS05055;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_012445943.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1101808 1102561 . + . ID=gene-IXO1104_RS05060;Name=IXO1104_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05060;old_locus_tag=IXO1104_05025 NZ_CP047492.1 Protein Homology CDS 1101808 1102079 . + 0 ID=cds-WP_263109041.1;Parent=gene-IXO1104_RS05060;Dbxref=Genbank:WP_263109041.1;Name=WP_263109041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS05060;product=IS5 family transposase;protein_id=WP_263109041.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1102078 1102561 . + 1 ID=cds-WP_263109041.1;Parent=gene-IXO1104_RS05060;Dbxref=Genbank:WP_263109041.1;Name=WP_263109041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS05060;product=IS5 family transposase;protein_id=WP_263109041.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1102562 1103527 . - . ID=gene-IXO1104_RS05065;Name=IXO1104_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05065;old_locus_tag=IXO1104_05030 NZ_CP047492.1 Protein Homology CDS 1102562 1103527 . - 0 ID=cds-WP_109182067.1;Parent=gene-IXO1104_RS05065;Dbxref=Genbank:WP_109182067.1;Name=WP_109182067.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS05065;product=IS1595 family transposase;protein_id=WP_109182067.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1103791 1104798 . + . ID=gene-IXO1104_RS05070;Name=IXO1104_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05070;old_locus_tag=IXO1104_05035 NZ_CP047492.1 Protein Homology CDS 1103791 1104798 . + 0 ID=cds-WP_011257874.1;Parent=gene-IXO1104_RS05070;Dbxref=Genbank:WP_011257874.1;Name=WP_011257874.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=IXO1104_RS05070;product=isocitrate dehydrogenase;protein_id=WP_011257874.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1104942 1105703 . - . ID=gene-IXO1104_RS05075;Name=IXO1104_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05075;old_locus_tag=IXO1104_05040 NZ_CP047492.1 Protein Homology CDS 1104942 1105703 . - 0 ID=cds-WP_011257875.1;Parent=gene-IXO1104_RS05075;Dbxref=Genbank:WP_011257875.1;Name=WP_011257875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927840.1;locus_tag=IXO1104_RS05075;product=Bax inhibitor-1/YccA family protein;protein_id=WP_011257875.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1105855 1105931 . + . ID=gene-IXO1104_RS05080;Name=IXO1104_RS05080;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05080;old_locus_tag=IXO1104_05045 NZ_CP047492.1 tRNAscan-SE tRNA 1105855 1105931 . + . ID=rna-IXO1104_RS05080;Parent=gene-IXO1104_RS05080;anticodon=(pos:1105889..1105891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05080;product=tRNA-Pro NZ_CP047492.1 tRNAscan-SE exon 1105855 1105931 . + . ID=exon-IXO1104_RS05080-1;Parent=rna-IXO1104_RS05080;anticodon=(pos:1105889..1105891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05080;product=tRNA-Pro NZ_CP047492.1 RefSeq gene 1105974 1106050 . + . ID=gene-IXO1104_RS05085;Name=IXO1104_RS05085;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05085;old_locus_tag=IXO1104_05050 NZ_CP047492.1 tRNAscan-SE tRNA 1105974 1106050 . + . ID=rna-IXO1104_RS05085;Parent=gene-IXO1104_RS05085;anticodon=(pos:1106008..1106010);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05085;product=tRNA-Arg NZ_CP047492.1 tRNAscan-SE exon 1105974 1106050 . + . ID=exon-IXO1104_RS05085-1;Parent=rna-IXO1104_RS05085;anticodon=(pos:1106008..1106010);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05085;product=tRNA-Arg NZ_CP047492.1 RefSeq gene 1106083 1106159 . + . ID=gene-IXO1104_RS05090;Name=IXO1104_RS05090;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05090;old_locus_tag=IXO1104_05055 NZ_CP047492.1 tRNAscan-SE tRNA 1106083 1106159 . + . ID=rna-IXO1104_RS05090;Parent=gene-IXO1104_RS05090;anticodon=(pos:1106117..1106119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05090;product=tRNA-His NZ_CP047492.1 tRNAscan-SE exon 1106083 1106159 . + . ID=exon-IXO1104_RS05090-1;Parent=rna-IXO1104_RS05090;anticodon=(pos:1106117..1106119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05090;product=tRNA-His NZ_CP047492.1 RefSeq gene 1106253 1106328 . + . ID=gene-IXO1104_RS05095;Name=IXO1104_RS05095;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05095;old_locus_tag=IXO1104_05060 NZ_CP047492.1 tRNAscan-SE tRNA 1106253 1106328 . + . ID=rna-IXO1104_RS05095;Parent=gene-IXO1104_RS05095;anticodon=(pos:1106286..1106288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05095;product=tRNA-Lys NZ_CP047492.1 tRNAscan-SE exon 1106253 1106328 . + . ID=exon-IXO1104_RS05095-1;Parent=rna-IXO1104_RS05095;anticodon=(pos:1106286..1106288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05095;product=tRNA-Lys NZ_CP047492.1 RefSeq pseudogene 1106635 1107678 . + . ID=gene-IXO1104_RS05100;Name=IXO1104_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05100;old_locus_tag=IXO1104_05065;pseudo=true NZ_CP047492.1 Protein Homology CDS 1106635 1107678 . + 0 ID=cds-IXO1104_RS05100;Parent=gene-IXO1104_RS05100;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558183.1;locus_tag=IXO1104_RS05100;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1107706 1108031 . + . ID=gene-IXO1104_RS05105;Name=IXO1104_RS05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05105;old_locus_tag=IXO1104_05070;partial=true;pseudo=true;start_range=.,1107706 NZ_CP047492.1 Protein Homology CDS 1107706 1108031 . + 0 ID=cds-IXO1104_RS05105;Parent=gene-IXO1104_RS05105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011239931.1;locus_tag=IXO1104_RS05105;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,1107706;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1108129 1108410 . + . ID=gene-IXO1104_RS05110;Name=IXO1104_RS05110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05110;old_locus_tag=IXO1104_05075;partial=true;pseudo=true;start_range=.,1108129 NZ_CP047492.1 Protein Homology CDS 1108129 1108410 . + 0 ID=cds-IXO1104_RS05110;Parent=gene-IXO1104_RS05110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS05110;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1108129;transl_table=11 NZ_CP047492.1 RefSeq gene 1108734 1108818 . + . ID=gene-IXO1104_RS05115;Name=IXO1104_RS05115;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05115;old_locus_tag=IXO1104_05080 NZ_CP047492.1 tRNAscan-SE tRNA 1108734 1108818 . + . ID=rna-IXO1104_RS05115;Parent=gene-IXO1104_RS05115;anticodon=(pos:1108768..1108770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05115;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 1108734 1108818 . + . ID=exon-IXO1104_RS05115-1;Parent=rna-IXO1104_RS05115;anticodon=(pos:1108768..1108770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05115;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 1109021 1110313 . + . ID=gene-IXO1104_RS05120;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=IXO1104_RS05120;old_locus_tag=IXO1104_05085 NZ_CP047492.1 Protein Homology CDS 1109021 1110313 . + 0 ID=cds-WP_012445939.1;Parent=gene-IXO1104_RS05120;Dbxref=Genbank:WP_012445939.1;Name=WP_012445939.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378367.1;locus_tag=IXO1104_RS05120;product=trigger factor;protein_id=WP_012445939.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1110406 1111032 . + . ID=gene-IXO1104_RS05125;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=IXO1104_RS05125;old_locus_tag=IXO1104_05090 NZ_CP047492.1 Protein Homology CDS 1110406 1111032 . + 0 ID=cds-WP_002806026.1;Parent=gene-IXO1104_RS05125;Dbxref=Genbank:WP_002806026.1;Name=WP_002806026.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806026.1;locus_tag=IXO1104_RS05125;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002806026.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1111157 1112443 . + . ID=gene-IXO1104_RS05130;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=IXO1104_RS05130;old_locus_tag=IXO1104_05095 NZ_CP047492.1 Protein Homology CDS 1111157 1112443 . + 0 ID=cds-WP_011257881.1;Parent=gene-IXO1104_RS05130;Dbxref=Genbank:WP_011257881.1;Name=WP_011257881.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451747.1;locus_tag=IXO1104_RS05130;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_011257881.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1112587 1115058 . + . ID=gene-IXO1104_RS05135;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=IXO1104_RS05135;old_locus_tag=IXO1104_05100 NZ_CP047492.1 Protein Homology CDS 1112587 1115058 . + 0 ID=cds-WP_012445937.1;Parent=gene-IXO1104_RS05135;Dbxref=Genbank:WP_012445937.1;Name=WP_012445937.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451748.1;locus_tag=IXO1104_RS05135;product=endopeptidase La;protein_id=WP_012445937.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1115272 1115544 . + . ID=gene-IXO1104_RS05140;Name=IXO1104_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05140;old_locus_tag=IXO1104_05105 NZ_CP047492.1 Protein Homology CDS 1115272 1115544 . + 0 ID=cds-WP_002806049.1;Parent=gene-IXO1104_RS05140;Dbxref=Genbank:WP_002806049.1;Name=WP_002806049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904732.1;locus_tag=IXO1104_RS05140;product=HU family DNA-binding protein;protein_id=WP_002806049.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1115556 1115630 . + . ID=gene-IXO1104_RS05145;Name=IXO1104_RS05145;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05145;old_locus_tag=IXO1104_05110 NZ_CP047492.1 tRNAscan-SE tRNA 1115556 1115630 . + . ID=rna-IXO1104_RS05145;Parent=gene-IXO1104_RS05145;anticodon=(pos:1115588..1115590);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05145;product=tRNA-Val NZ_CP047492.1 tRNAscan-SE exon 1115556 1115630 . + . ID=exon-IXO1104_RS05145-1;Parent=rna-IXO1104_RS05145;anticodon=(pos:1115588..1115590);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05145;product=tRNA-Val NZ_CP047492.1 RefSeq gene 1115659 1115735 . + . ID=gene-IXO1104_RS05150;Name=IXO1104_RS05150;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05150;old_locus_tag=IXO1104_05115 NZ_CP047492.1 tRNAscan-SE tRNA 1115659 1115735 . + . ID=rna-IXO1104_RS05150;Parent=gene-IXO1104_RS05150;anticodon=(pos:1115693..1115695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05150;product=tRNA-Asp NZ_CP047492.1 tRNAscan-SE exon 1115659 1115735 . + . ID=exon-IXO1104_RS05150-1;Parent=rna-IXO1104_RS05150;anticodon=(pos:1115693..1115695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05150;product=tRNA-Asp NZ_CP047492.1 RefSeq gene 1115830 1115906 . + . ID=gene-IXO1104_RS05155;Name=IXO1104_RS05155;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05155;old_locus_tag=IXO1104_05120 NZ_CP047492.1 tRNAscan-SE tRNA 1115830 1115906 . + . ID=rna-IXO1104_RS05155;Parent=gene-IXO1104_RS05155;anticodon=(pos:1115864..1115866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05155;product=tRNA-Asp NZ_CP047492.1 tRNAscan-SE exon 1115830 1115906 . + . ID=exon-IXO1104_RS05155-1;Parent=rna-IXO1104_RS05155;anticodon=(pos:1115864..1115866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05155;product=tRNA-Asp NZ_CP047492.1 RefSeq gene 1116376 1118346 . + . ID=gene-IXO1104_RS05160;Name=IXO1104_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05160;old_locus_tag=IXO1104_05125 NZ_CP047492.1 Protein Homology CDS 1116376 1118346 . + 0 ID=cds-WP_011407728.1;Parent=gene-IXO1104_RS05160;Dbxref=Genbank:WP_011407728.1;Name=WP_011407728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920425.1;locus_tag=IXO1104_RS05160;product=peptidylprolyl isomerase;protein_id=WP_011407728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1119059 1120237 . - . ID=gene-IXO1104_RS05165;Name=IXO1104_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05165;old_locus_tag=IXO1104_05130 NZ_CP047492.1 Protein Homology CDS 1119059 1120237 . - 0 ID=cds-WP_041182774.1;Parent=gene-IXO1104_RS05165;Dbxref=Genbank:WP_041182774.1;Name=WP_041182774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112895.1;locus_tag=IXO1104_RS05165;product=lytic transglycosylase domain-containing protein;protein_id=WP_041182774.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1120234 1121001 . - . ID=gene-IXO1104_RS05170;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=IXO1104_RS05170;old_locus_tag=IXO1104_05135 NZ_CP047492.1 Protein Homology CDS 1120234 1121001 . - 0 ID=cds-WP_011257886.1;Parent=gene-IXO1104_RS05170;Dbxref=Genbank:WP_011257886.1;Name=WP_011257886.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257886.1;locus_tag=IXO1104_RS05170;product=hydroxyacylglutathione hydrolase;protein_id=WP_011257886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1121014 1121670 . + . ID=gene-IXO1104_RS05175;Name=IXO1104_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05175;old_locus_tag=IXO1104_05140 NZ_CP047492.1 Protein Homology CDS 1121014 1121670 . + 0 ID=cds-WP_011257887.1;Parent=gene-IXO1104_RS05175;Dbxref=Genbank:WP_011257887.1;Name=WP_011257887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346590.1;locus_tag=IXO1104_RS05175;product=hypothetical protein;protein_id=WP_011257887.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1121698 1122150 . + . ID=gene-IXO1104_RS05180;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=IXO1104_RS05180;old_locus_tag=IXO1104_05145 NZ_CP047492.1 Protein Homology CDS 1121698 1122150 . + 0 ID=cds-WP_011257888.1;Parent=gene-IXO1104_RS05180;Dbxref=Genbank:WP_011257888.1;Name=WP_011257888.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158126.1;locus_tag=IXO1104_RS05180;product=ribonuclease HI;protein_id=WP_011257888.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1122159 1122893 . + . ID=gene-IXO1104_RS05185;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS05185;old_locus_tag=IXO1104_05150 NZ_CP047492.1 Protein Homology CDS 1122159 1122893 . + 0 ID=cds-WP_011257889.1;Parent=gene-IXO1104_RS05185;Dbxref=Genbank:WP_011257889.1;Name=WP_011257889.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158127.1;locus_tag=IXO1104_RS05185;product=DNA polymerase III subunit epsilon;protein_id=WP_011257889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1122953 1123024 . + . ID=gene-IXO1104_RS05190;Name=IXO1104_RS05190;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05190;old_locus_tag=IXO1104_05155 NZ_CP047492.1 cmsearch ncRNA 1122953 1123024 . + . ID=rna-IXO1104_RS05190;Parent=gene-IXO1104_RS05190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05190;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1122953 1123024 . + . ID=exon-IXO1104_RS05190-1;Parent=rna-IXO1104_RS05190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05190;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1123329 1124033 . - . ID=gene-IXO1104_RS05195;Name=IXO1104_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05195;old_locus_tag=IXO1104_05160 NZ_CP047492.1 Protein Homology CDS 1123329 1124033 . - 0 ID=cds-WP_012445930.1;Parent=gene-IXO1104_RS05195;Dbxref=Genbank:WP_012445930.1;Name=WP_012445930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483822.1;locus_tag=IXO1104_RS05195;product=protein phosphatase 2C domain-containing protein;protein_id=WP_012445930.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1124230 1124320 . + . ID=gene-IXO1104_RS05200;Name=IXO1104_RS05200;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05200;old_locus_tag=IXO1104_05165 NZ_CP047492.1 tRNAscan-SE tRNA 1124230 1124320 . + . ID=rna-IXO1104_RS05200;Parent=gene-IXO1104_RS05200;anticodon=(pos:1124264..1124266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05200;product=tRNA-Ser NZ_CP047492.1 tRNAscan-SE exon 1124230 1124320 . + . ID=exon-IXO1104_RS05200-1;Parent=rna-IXO1104_RS05200;anticodon=(pos:1124264..1124266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05200;product=tRNA-Ser NZ_CP047492.1 RefSeq gene 1124860 1125489 . - . ID=gene-IXO1104_RS05205;Name=IXO1104_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05205;old_locus_tag=IXO1104_05170 NZ_CP047492.1 GeneMarkS-2+ CDS 1124860 1125489 . - 0 ID=cds-WP_011407730.1;Parent=gene-IXO1104_RS05205;Dbxref=Genbank:WP_011407730.1;Name=WP_011407730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05205;product=hypothetical protein;protein_id=WP_011407730.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1126008 1126283 . + . ID=gene-IXO1104_RS05210;Name=IXO1104_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05210;old_locus_tag=IXO1104_05175 NZ_CP047492.1 GeneMarkS-2+ CDS 1126008 1126283 . + 0 ID=cds-WP_011257892.1;Parent=gene-IXO1104_RS05210;Dbxref=Genbank:WP_011257892.1;Name=WP_011257892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05210;product=DNA methyltransferase;protein_id=WP_011257892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1126382 1126582 . + . ID=gene-IXO1104_RS05215;Name=IXO1104_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05215 NZ_CP047492.1 Protein Homology CDS 1126382 1126582 . + 0 ID=cds-WP_012445927.1;Parent=gene-IXO1104_RS05215;Dbxref=Genbank:WP_012445927.1;Name=WP_012445927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303605.1;locus_tag=IXO1104_RS05215;product=hypothetical protein;protein_id=WP_012445927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1126978 1129701 . + . ID=gene-IXO1104_RS05220;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=IXO1104_RS05220;old_locus_tag=IXO1104_05180 NZ_CP047492.1 Protein Homology CDS 1126978 1129701 . + 0 ID=cds-WP_263117843.1;Parent=gene-IXO1104_RS05220;Dbxref=Genbank:WP_263117843.1;Name=WP_263117843.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=vgrG;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=IXO1104_RS05220;product=type VI secretion system tip protein VgrG;protein_id=WP_263117843.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1129769 1131919 . + . ID=gene-IXO1104_RS05225;Name=IXO1104_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05225;old_locus_tag=IXO1104_05185 NZ_CP047492.1 Protein Homology CDS 1129769 1131919 . + 0 ID=cds-WP_059317525.1;Parent=gene-IXO1104_RS05225;Dbxref=Genbank:WP_059317525.1;Name=WP_059317525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407734.1;locus_tag=IXO1104_RS05225;product=DUF3274 domain-containing protein;protein_id=WP_059317525.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1131916 1133613 . + . ID=gene-IXO1104_RS05230;Name=IXO1104_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05230;old_locus_tag=IXO1104_05190 NZ_CP047492.1 Protein Homology CDS 1131916 1133613 . + 0 ID=cds-WP_044757078.1;Parent=gene-IXO1104_RS05230;Dbxref=Genbank:WP_044757078.1;Name=WP_044757078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257197.1;locus_tag=IXO1104_RS05230;product=DUF2875 family protein;protein_id=WP_044757078.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1133610 1133756 . + . ID=gene-IXO1104_RS05235;Name=IXO1104_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05235 NZ_CP047492.1 Protein Homology CDS 1133610 1133756 . + 0 ID=cds-WP_012445919.1;Parent=gene-IXO1104_RS05235;Dbxref=Genbank:WP_012445919.1;Name=WP_012445919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504125.1;locus_tag=IXO1104_RS05235;product=membrane protein;protein_id=WP_012445919.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1133692 1133871 . + . ID=gene-IXO1104_RS05240;Name=IXO1104_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05240;old_locus_tag=IXO1104_05195 NZ_CP047492.1 Protein Homology CDS 1133692 1133871 . + 0 ID=cds-WP_228329689.1;Parent=gene-IXO1104_RS05240;Dbxref=Genbank:WP_228329689.1;Name=WP_228329689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=IXO1104_RS05240;product=PAAR domain-containing protein;protein_id=WP_228329689.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1133933 1134484 . + . ID=gene-IXO1104_RS05245;Name=IXO1104_RS05245;end_range=1134484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05245;old_locus_tag=IXO1104_05200;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1133933 1134484 . + 0 ID=cds-IXO1104_RS05245;Parent=gene-IXO1104_RS05245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1134484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257196.1;locus_tag=IXO1104_RS05245;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1134573 1135538 . + . ID=gene-IXO1104_RS05250;Name=IXO1104_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05250;old_locus_tag=IXO1104_05205 NZ_CP047492.1 Protein Homology CDS 1134573 1135538 . + 0 ID=cds-WP_115862289.1;Parent=gene-IXO1104_RS05250;Dbxref=Genbank:WP_115862289.1;Name=WP_115862289.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS05250;product=IS1595 family transposase;protein_id=WP_115862289.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1135637 1136392 . - . ID=gene-IXO1104_RS05255;Name=IXO1104_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05255;old_locus_tag=IXO1104_05210 NZ_CP047492.1 GeneMarkS-2+ CDS 1135637 1136392 . - 0 ID=cds-WP_011257901.1;Parent=gene-IXO1104_RS05255;Dbxref=Genbank:WP_011257901.1;Name=WP_011257901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05255;product=site-specific integrase;protein_id=WP_011257901.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1136434 1136838 . + . ID=gene-IXO1104_RS05260;Name=IXO1104_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05260;old_locus_tag=IXO1104_05215 NZ_CP047492.1 Protein Homology CDS 1136434 1136838 . + 0 ID=cds-WP_011257902.1;Parent=gene-IXO1104_RS05260;Dbxref=Genbank:WP_011257902.1;Name=WP_011257902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968982.1;locus_tag=IXO1104_RS05260;product=DUF6165 family protein;protein_id=WP_011257902.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1137049 1138098 . - . ID=gene-IXO1104_RS05265;Name=IXO1104_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05265;old_locus_tag=IXO1104_05220 NZ_CP047492.1 Protein Homology CDS 1137049 1138098 . - 0 ID=cds-WP_011257903.1;Parent=gene-IXO1104_RS05265;Dbxref=Genbank:WP_011257903.1;Name=WP_011257903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050699.1;locus_tag=IXO1104_RS05265;product=glycosyltransferase family 9 protein;protein_id=WP_011257903.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1138119 1138868 . + . ID=gene-IXO1104_RS05270;Name=IXO1104_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05270;old_locus_tag=IXO1104_05225 NZ_CP047492.1 Protein Homology CDS 1138119 1138868 . + 0 ID=cds-WP_011257904.1;Parent=gene-IXO1104_RS05270;Dbxref=Genbank:WP_011257904.1;Name=WP_011257904.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305198.1;locus_tag=IXO1104_RS05270;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_011257904.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1138868 1139617 . + . ID=gene-IXO1104_RS05275;Name=IXO1104_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05275;old_locus_tag=IXO1104_05230 NZ_CP047492.1 Protein Homology CDS 1138868 1139617 . + 0 ID=cds-WP_011257905.1;Parent=gene-IXO1104_RS05275;Dbxref=Genbank:WP_011257905.1;Name=WP_011257905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158132.1;locus_tag=IXO1104_RS05275;product=MBL fold metallo-hydrolase;protein_id=WP_011257905.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1139617 1140648 . + . ID=gene-IXO1104_RS05280;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS05280;old_locus_tag=IXO1104_05235 NZ_CP047492.1 Protein Homology CDS 1139617 1140648 . + 0 ID=cds-WP_011257906.1;Parent=gene-IXO1104_RS05280;Dbxref=Genbank:WP_011257906.1;Name=WP_011257906.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814367.1;locus_tag=IXO1104_RS05280;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_011257906.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1140726 1141025 . + . ID=gene-IXO1104_RS05285;Name=IXO1104_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05285;old_locus_tag=IXO1104_05240 NZ_CP047492.1 Protein Homology CDS 1140726 1141025 . + 0 ID=cds-WP_229001936.1;Parent=gene-IXO1104_RS05285;Dbxref=Genbank:WP_229001936.1;Name=WP_229001936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158134.1;locus_tag=IXO1104_RS05285;product=DUF4440 domain-containing protein;protein_id=WP_229001936.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1141050 1141547 . + . ID=gene-IXO1104_RS05290;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=IXO1104_RS05290;old_locus_tag=IXO1104_05245 NZ_CP047492.1 Protein Homology CDS 1141050 1141547 . + 0 ID=cds-WP_011407742.1;Parent=gene-IXO1104_RS05290;Dbxref=Genbank:WP_011407742.1;Name=WP_011407742.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159642.1;locus_tag=IXO1104_RS05290;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_011407742.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1141544 1141789 . + . ID=gene-IXO1104_RS05295;Name=IXO1104_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05295;old_locus_tag=IXO1104_05250 NZ_CP047492.1 Protein Homology CDS 1141544 1141789 . + 0 ID=cds-WP_011257909.1;Parent=gene-IXO1104_RS05295;Dbxref=Genbank:WP_011257909.1;Name=WP_011257909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257909.1;locus_tag=IXO1104_RS05295;product=MoaD/ThiS family protein;protein_id=WP_011257909.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1141786 1142232 . + . ID=gene-IXO1104_RS05300;Name=IXO1104_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05300;old_locus_tag=IXO1104_05255 NZ_CP047492.1 Protein Homology CDS 1141786 1142232 . + 0 ID=cds-WP_011257910.1;Parent=gene-IXO1104_RS05300;Dbxref=Genbank:WP_011257910.1;Name=WP_011257910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158137.1;locus_tag=IXO1104_RS05300;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_011257910.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1142394 1142490 . - . ID=gene-IXO1104_RS05305;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=IXO1104_RS05305;old_locus_tag=IXO1104_05260 NZ_CP047492.1 cmsearch SRP_RNA 1142394 1142490 . - . ID=rna-IXO1104_RS05305;Parent=gene-IXO1104_RS05305;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05305;product=signal recognition particle sRNA small type NZ_CP047492.1 cmsearch exon 1142394 1142490 . - . ID=exon-IXO1104_RS05305-1;Parent=rna-IXO1104_RS05305;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05305;product=signal recognition particle sRNA small type NZ_CP047492.1 RefSeq gene 1142566 1142658 . - . ID=gene-IXO1104_RS05310;Name=IXO1104_RS05310;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS05310;old_locus_tag=IXO1104_05265 NZ_CP047492.1 tRNAscan-SE tRNA 1142566 1142658 . - . ID=rna-IXO1104_RS05310;Parent=gene-IXO1104_RS05310;anticodon=(pos:complement(1142622..1142624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05310;product=tRNA-Ser NZ_CP047492.1 tRNAscan-SE exon 1142566 1142658 . - . ID=exon-IXO1104_RS05310-1;Parent=rna-IXO1104_RS05310;anticodon=(pos:complement(1142622..1142624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS05310;product=tRNA-Ser NZ_CP047492.1 RefSeq gene 1142794 1144890 . + . ID=gene-IXO1104_RS05315;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=IXO1104_RS05315;old_locus_tag=IXO1104_05270 NZ_CP047492.1 Protein Homology CDS 1142794 1144890 . + 0 ID=cds-WP_075240514.1;Parent=gene-IXO1104_RS05315;Dbxref=Genbank:WP_075240514.1;Name=WP_075240514.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=IXO1104_RS05315;product=DNA polymerase III subunit gamma/tau;protein_id=WP_075240514.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1144897 1145217 . + . ID=gene-IXO1104_RS05320;Name=IXO1104_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05320;old_locus_tag=IXO1104_05275 NZ_CP047492.1 Protein Homology CDS 1144897 1145217 . + 0 ID=cds-WP_011257912.1;Parent=gene-IXO1104_RS05320;Dbxref=Genbank:WP_011257912.1;Name=WP_011257912.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=IXO1104_RS05320;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_011257912.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1145315 1145908 . + . ID=gene-IXO1104_RS05325;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=IXO1104_RS05325;old_locus_tag=IXO1104_05280 NZ_CP047492.1 Protein Homology CDS 1145315 1145908 . + 0 ID=cds-WP_011257913.1;Parent=gene-IXO1104_RS05325;Dbxref=Genbank:WP_011257913.1;Name=WP_011257913.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483843.1;locus_tag=IXO1104_RS05325;product=recombination mediator RecR;protein_id=WP_011257913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1146010 1146360 . + . ID=gene-IXO1104_RS05330;Name=IXO1104_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05330;old_locus_tag=IXO1104_05285 NZ_CP047492.1 Protein Homology CDS 1146010 1146360 . + 0 ID=cds-WP_011407744.1;Parent=gene-IXO1104_RS05330;Dbxref=Genbank:WP_011407744.1;Name=WP_011407744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155799.1;locus_tag=IXO1104_RS05330;product=histidine triad nucleotide-binding protein;protein_id=WP_011407744.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1146480 1147013 . - . ID=gene-IXO1104_RS05335;Name=IXO1104_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05335;old_locus_tag=IXO1104_05290 NZ_CP047492.1 Protein Homology CDS 1146480 1147013 . - 0 ID=cds-WP_011257915.1;Parent=gene-IXO1104_RS05335;Dbxref=Genbank:WP_011257915.1;Name=WP_011257915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920486.1;locus_tag=IXO1104_RS05335;product=Slp family lipoprotein;protein_id=WP_011257915.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1147010 1148962 . - . ID=gene-IXO1104_RS05340;Name=IXO1104_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05340;old_locus_tag=IXO1104_05295 NZ_CP047492.1 Protein Homology CDS 1147010 1148962 . - 0 ID=cds-WP_011257916.1;Parent=gene-IXO1104_RS05340;Dbxref=Genbank:WP_011257916.1;Name=WP_011257916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346625.1;locus_tag=IXO1104_RS05340;product=DUF3488 and transglutaminase-like domain-containing protein;protein_id=WP_011257916.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1148955 1149911 . - . ID=gene-IXO1104_RS05345;Name=IXO1104_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05345;old_locus_tag=IXO1104_05300 NZ_CP047492.1 Protein Homology CDS 1148955 1149911 . - 0 ID=cds-WP_011257917.1;Parent=gene-IXO1104_RS05345;Dbxref=Genbank:WP_011257917.1;Name=WP_011257917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850007.1;locus_tag=IXO1104_RS05345;product=DUF58 domain-containing protein;protein_id=WP_011257917.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1149917 1150870 . - . ID=gene-IXO1104_RS05350;Name=IXO1104_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05350;old_locus_tag=IXO1104_05305 NZ_CP047492.1 Protein Homology CDS 1149917 1150870 . - 0 ID=cds-WP_075240513.1;Parent=gene-IXO1104_RS05350;Dbxref=Genbank:WP_075240513.1;Name=WP_075240513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502249.1;locus_tag=IXO1104_RS05350;product=MoxR family ATPase;protein_id=WP_075240513.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1150909 1152777 . + . ID=gene-IXO1104_RS05355;Name=IXO1104_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05355;old_locus_tag=IXO1104_05310 NZ_CP047492.1 Protein Homology CDS 1150909 1152777 . + 0 ID=cds-WP_012445908.1;Parent=gene-IXO1104_RS05355;Dbxref=Genbank:WP_012445908.1;Name=WP_012445908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303142.1;locus_tag=IXO1104_RS05355;product=glycosyltransferase family 39 protein;protein_id=WP_012445908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1152964 1153311 . + . ID=gene-IXO1104_RS05360;Name=IXO1104_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05360 NZ_CP047492.1 GeneMarkS-2+ CDS 1152964 1153311 . + 0 ID=cds-WP_263117846.1;Parent=gene-IXO1104_RS05360;Dbxref=Genbank:WP_263117846.1;Name=WP_263117846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05360;product=hypothetical protein;protein_id=WP_263117846.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1153549 1153971 . + . ID=gene-IXO1104_RS05365;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IXO1104_RS05365;old_locus_tag=IXO1104_05320 NZ_CP047492.1 Protein Homology CDS 1153549 1153971 . + 0 ID=cds-WP_027703699.1;Parent=gene-IXO1104_RS05365;Dbxref=Genbank:WP_027703699.1;Name=WP_027703699.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483474.1;locus_tag=IXO1104_RS05365;product=arsenate reductase (glutaredoxin);protein_id=WP_027703699.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1154293 1154808 . + . ID=gene-IXO1104_RS05370;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=IXO1104_RS05370;old_locus_tag=IXO1104_05325 NZ_CP047492.1 Protein Homology CDS 1154293 1154808 . + 0 ID=cds-WP_011407749.1;Parent=gene-IXO1104_RS05370;Dbxref=Genbank:WP_011407749.1;Name=WP_011407749.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303679.1;locus_tag=IXO1104_RS05370;product=peptide deformylase;protein_id=WP_011407749.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1154907 1154983 . + . ID=gene-IXO1104_RS05375;Name=IXO1104_RS05375;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05375;old_locus_tag=IXO1104_05330 NZ_CP047492.1 cmsearch ncRNA 1154907 1154983 . + . ID=rna-IXO1104_RS05375;Parent=gene-IXO1104_RS05375;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05375;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1154907 1154983 . + . ID=exon-IXO1104_RS05375-1;Parent=rna-IXO1104_RS05375;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05375;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 1155325 1156138 . + . ID=gene-IXO1104_RS05380;Name=IXO1104_RS05380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05380;old_locus_tag=IXO1104_05335;pseudo=true NZ_CP047492.1 Protein Homology CDS 1155325 1156138 . + 0 ID=cds-IXO1104_RS05380;Parent=gene-IXO1104_RS05380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171825.1;locus_tag=IXO1104_RS05380;product=cellulase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1156556 1157302 . + . ID=gene-IXO1104_RS05385;Name=IXO1104_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05385;old_locus_tag=IXO1104_05340 NZ_CP047492.1 Protein Homology CDS 1156556 1157302 . + 0 ID=cds-WP_041182379.1;Parent=gene-IXO1104_RS05385;Dbxref=Genbank:WP_041182379.1;Name=WP_041182379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365555.1;locus_tag=IXO1104_RS05385;product=cellulase;protein_id=WP_041182379.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1157696 1157772 . - . ID=gene-IXO1104_RS05390;Name=IXO1104_RS05390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05390;old_locus_tag=IXO1104_05345 NZ_CP047492.1 cmsearch ncRNA 1157696 1157772 . - . ID=rna-IXO1104_RS05390;Parent=gene-IXO1104_RS05390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05390;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1157696 1157772 . - . ID=exon-IXO1104_RS05390-1;Parent=rna-IXO1104_RS05390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05390;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1157919 1159520 . - . ID=gene-IXO1104_RS05395;Name=IXO1104_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05395;old_locus_tag=IXO1104_05350 NZ_CP047492.1 Protein Homology CDS 1157919 1159520 . - 0 ID=cds-WP_011407751.1;Parent=gene-IXO1104_RS05395;Dbxref=Genbank:WP_011407751.1;Name=WP_011407751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850148.1;locus_tag=IXO1104_RS05395;product=polysaccharide lyase family protein;protein_id=WP_011407751.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1159881 1160207 . - . ID=gene-IXO1104_RS05400;Name=IXO1104_RS05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05400;old_locus_tag=IXO1104_05355;pseudo=true NZ_CP047492.1 Protein Homology CDS 1159881 1160207 . - 0 ID=cds-IXO1104_RS05400;Parent=gene-IXO1104_RS05400;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091038.1;locus_tag=IXO1104_RS05400;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1160509 1161744 . + . ID=gene-IXO1104_RS05405;Name=IXO1104_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05405;old_locus_tag=IXO1104_05360 NZ_CP047492.1 Protein Homology CDS 1160509 1161744 . + 0 ID=cds-WP_011257570.1;Parent=gene-IXO1104_RS05405;Dbxref=Genbank:WP_011257570.1;Name=WP_011257570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS05405;product=ISL3 family transposase;protein_id=WP_011257570.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1161761 1162294 . + . ID=gene-IXO1104_RS05410;Name=IXO1104_RS05410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05410;old_locus_tag=IXO1104_05365;partial=true;pseudo=true;start_range=.,1161761 NZ_CP047492.1 Protein Homology CDS 1161761 1162294 . + 0 ID=cds-IXO1104_RS05410;Parent=gene-IXO1104_RS05410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557936.1;locus_tag=IXO1104_RS05410;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1161761;transl_table=11 NZ_CP047492.1 RefSeq gene 1162613 1163539 . - . ID=gene-IXO1104_RS05415;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=IXO1104_RS05415;old_locus_tag=IXO1104_05370 NZ_CP047492.1 Protein Homology CDS 1162613 1163539 . - 0 ID=cds-WP_011257932.1;Parent=gene-IXO1104_RS05415;Dbxref=Genbank:WP_011257932.1;Name=WP_011257932.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913558.1;locus_tag=IXO1104_RS05415;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011257932.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1163585 1164382 . + . ID=gene-IXO1104_RS05420;Name=IXO1104_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05420;old_locus_tag=IXO1104_05375 NZ_CP047492.1 Protein Homology CDS 1163585 1164382 . + 0 ID=cds-WP_027703521.1;Parent=gene-IXO1104_RS05420;Dbxref=Genbank:WP_027703521.1;Name=WP_027703521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407758.1;locus_tag=IXO1104_RS05420;product=polysaccharide deacetylase family protein;protein_id=WP_027703521.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1164387 1164463 . - . ID=gene-IXO1104_RS05425;Name=IXO1104_RS05425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05425;old_locus_tag=IXO1104_05380 NZ_CP047492.1 cmsearch ncRNA 1164387 1164463 . - . ID=rna-IXO1104_RS05425;Parent=gene-IXO1104_RS05425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05425;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1164387 1164463 . - . ID=exon-IXO1104_RS05425-1;Parent=rna-IXO1104_RS05425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05425;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1164684 1165355 . - . ID=gene-IXO1104_RS05430;Name=IXO1104_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05430;old_locus_tag=IXO1104_05385 NZ_CP047492.1 Protein Homology CDS 1164684 1165355 . - 0 ID=cds-WP_011407759.1;Parent=gene-IXO1104_RS05430;Dbxref=Genbank:WP_011407759.1;Name=WP_011407759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038464.1;locus_tag=IXO1104_RS05430;product=methyltransferase;protein_id=WP_011407759.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1165678 1166316 . - . ID=gene-IXO1104_RS05435;Name=IXO1104_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05435;old_locus_tag=IXO1104_05390 NZ_CP047492.1 Protein Homology CDS 1165678 1166316 . - 0 ID=cds-WP_011407760.1;Parent=gene-IXO1104_RS05435;Dbxref=Genbank:WP_011407760.1;Name=WP_011407760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171955.1;locus_tag=IXO1104_RS05435;product=SGNH/GDSL hydrolase family protein;protein_id=WP_011407760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1166316 1167587 . - . ID=gene-IXO1104_RS05440;Name=IXO1104_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05440;old_locus_tag=IXO1104_05395 NZ_CP047492.1 Protein Homology CDS 1166316 1167587 . - 0 ID=cds-WP_011257936.1;Parent=gene-IXO1104_RS05440;Dbxref=Genbank:WP_011257936.1;Name=WP_011257936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902304.1;locus_tag=IXO1104_RS05440;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011257936.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1167741 1168832 . + . ID=gene-IXO1104_RS05445;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=IXO1104_RS05445;old_locus_tag=IXO1104_05400 NZ_CP047492.1 Protein Homology CDS 1167741 1168832 . + 0 ID=cds-WP_075239826.1;Parent=gene-IXO1104_RS05445;Dbxref=Genbank:WP_075239826.1;Name=WP_075239826.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038460.1;locus_tag=IXO1104_RS05445;product=ribosome small subunit-dependent GTPase A;protein_id=WP_075239826.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1168832 1170094 . + . ID=gene-IXO1104_RS05450;Name=IXO1104_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05450;old_locus_tag=IXO1104_05405 NZ_CP047492.1 Protein Homology CDS 1168832 1170094 . + 0 ID=cds-WP_012445895.1;Parent=gene-IXO1104_RS05450;Dbxref=Genbank:WP_012445895.1;Name=WP_012445895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365514.1;locus_tag=IXO1104_RS05450;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=WP_012445895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1170247 1170927 . + . ID=gene-IXO1104_RS05455;Name=IXO1104_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05455;old_locus_tag=IXO1104_05410 NZ_CP047492.1 Protein Homology CDS 1170247 1170927 . + 0 ID=cds-WP_027703520.1;Parent=gene-IXO1104_RS05455;Dbxref=Genbank:WP_027703520.1;Name=WP_027703520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157539.1;locus_tag=IXO1104_RS05455;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_027703520.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1171094 1173010 . - . ID=gene-IXO1104_RS05460;Name=IXO1104_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05460;old_locus_tag=IXO1104_05415 NZ_CP047492.1 Protein Homology CDS 1171094 1173010 . - 0 ID=cds-WP_011407762.1;Parent=gene-IXO1104_RS05460;Dbxref=Genbank:WP_011407762.1;Name=WP_011407762.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365510.1;locus_tag=IXO1104_RS05460;product=amylosucrase;protein_id=WP_011407762.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1173045 1175489 . - . ID=gene-IXO1104_RS05465;Name=IXO1104_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05465;old_locus_tag=IXO1104_05420 NZ_CP047492.1 Protein Homology CDS 1173045 1175489 . - 0 ID=cds-WP_075239619.1;Parent=gene-IXO1104_RS05465;Dbxref=Genbank:WP_075239619.1;Name=WP_075239619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174521.1;locus_tag=IXO1104_RS05465;product=TonB-dependent receptor;protein_id=WP_075239619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1175759 1177090 . + . ID=gene-IXO1104_RS05470;Name=IXO1104_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05470;old_locus_tag=IXO1104_05425 NZ_CP047492.1 Protein Homology CDS 1175759 1177090 . + 0 ID=cds-WP_044757067.1;Parent=gene-IXO1104_RS05470;Dbxref=Genbank:WP_044757067.1;Name=WP_044757067.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407764.1;locus_tag=IXO1104_RS05470;product=MFS transporter;protein_id=WP_044757067.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1177138 1177202 . + . ID=gene-IXO1104_RS05475;Name=IXO1104_RS05475;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05475;old_locus_tag=IXO1104_05430 NZ_CP047492.1 cmsearch ncRNA 1177138 1177202 . + . ID=rna-IXO1104_RS05475;Parent=gene-IXO1104_RS05475;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05475;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1177138 1177202 . + . ID=exon-IXO1104_RS05475-1;Parent=rna-IXO1104_RS05475;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05475;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1177359 1178390 . - . ID=gene-IXO1104_RS05480;Name=IXO1104_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05480;old_locus_tag=IXO1104_05435 NZ_CP047492.1 Protein Homology CDS 1177359 1178390 . - 0 ID=cds-WP_011407765.1;Parent=gene-IXO1104_RS05480;Dbxref=Genbank:WP_011407765.1;Name=WP_011407765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932772.1;locus_tag=IXO1104_RS05480;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011407765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1178631 1179371 . - . ID=gene-IXO1104_RS05485;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=IXO1104_RS05485;old_locus_tag=IXO1104_05440 NZ_CP047492.1 Protein Homology CDS 1178631 1179371 . - 0 ID=cds-WP_011407766.1;Parent=gene-IXO1104_RS05485;Dbxref=Genbank:WP_011407766.1;Name=WP_011407766.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391443.1;locus_tag=IXO1104_RS05485;product=acetoacetyl-CoA reductase;protein_id=WP_011407766.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1179483 1180811 . - . ID=gene-IXO1104_RS05490;Name=IXO1104_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05490;old_locus_tag=IXO1104_05445 NZ_CP047492.1 Protein Homology CDS 1179483 1180811 . - 0 ID=cds-WP_011257945.1;Parent=gene-IXO1104_RS05490;Dbxref=Genbank:WP_011257945.1;Name=WP_011257945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483418.1;locus_tag=IXO1104_RS05490;product=CitMHS family transporter;protein_id=WP_011257945.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1181039 1182232 . - . ID=gene-IXO1104_RS05495;Name=IXO1104_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05495;old_locus_tag=IXO1104_05450 NZ_CP047492.1 Protein Homology CDS 1181039 1182232 . - 0 ID=cds-WP_011407767.1;Parent=gene-IXO1104_RS05495;Dbxref=Genbank:WP_011407767.1;Name=WP_011407767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157498.1;locus_tag=IXO1104_RS05495;product=OprO/OprP family phosphate-selective porin;protein_id=WP_011407767.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1182488 1183189 . + . ID=gene-IXO1104_RS05500;Name=IXO1104_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05500;old_locus_tag=IXO1104_05455 NZ_CP047492.1 Protein Homology CDS 1182488 1183189 . + 0 ID=cds-WP_011407768.1;Parent=gene-IXO1104_RS05500;Dbxref=Genbank:WP_011407768.1;Name=WP_011407768.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163399.1;locus_tag=IXO1104_RS05500;product=response regulator;protein_id=WP_011407768.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1183182 1184567 . + . ID=gene-IXO1104_RS05505;Name=IXO1104_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05505;old_locus_tag=IXO1104_05460 NZ_CP047492.1 Protein Homology CDS 1183182 1184567 . + 0 ID=cds-WP_069970094.1;Parent=gene-IXO1104_RS05505;Dbxref=Genbank:WP_069970094.1;Name=WP_069970094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932775.1;locus_tag=IXO1104_RS05505;product=sensor histidine kinase;protein_id=WP_069970094.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1184567 1185616 . + . ID=gene-IXO1104_RS05510;Name=IXO1104_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05510;old_locus_tag=IXO1104_05465 NZ_CP047492.1 Protein Homology CDS 1184567 1185616 . + 0 ID=cds-WP_011407770.1;Parent=gene-IXO1104_RS05510;Dbxref=Genbank:WP_011407770.1;Name=WP_011407770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157495.1;locus_tag=IXO1104_RS05510;product=ABC transporter substrate-binding protein;protein_id=WP_011407770.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1185656 1186294 . + . ID=gene-IXO1104_RS05515;Name=IXO1104_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05515;old_locus_tag=IXO1104_05470 NZ_CP047492.1 Protein Homology CDS 1185656 1186294 . + 0 ID=cds-WP_011257949.1;Parent=gene-IXO1104_RS05515;Dbxref=Genbank:WP_011257949.1;Name=WP_011257949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257949.1;locus_tag=IXO1104_RS05515;product=response regulator transcription factor;protein_id=WP_011257949.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1186425 1186793 . - . ID=gene-IXO1104_RS05520;Name=IXO1104_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05520 NZ_CP047492.1 Protein Homology CDS 1186425 1186793 . - 0 ID=cds-WP_041182382.1;Parent=gene-IXO1104_RS05520;Dbxref=Genbank:WP_041182382.1;Name=WP_041182382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167386.1;locus_tag=IXO1104_RS05520;product=Atu4866 domain-containing protein;protein_id=WP_041182382.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1186810 1187349 . - . ID=gene-IXO1104_RS05525;Name=IXO1104_RS05525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05525;partial=true;pseudo=true;start_range=.,1186810 NZ_CP047492.1 Protein Homology CDS 1186810 1187349 . - 0 ID=cds-IXO1104_RS05525;Parent=gene-IXO1104_RS05525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091015.1;locus_tag=IXO1104_RS05525;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;start_range=.,1186810;transl_table=11 NZ_CP047492.1 RefSeq gene 1187346 1187993 . - . ID=gene-IXO1104_RS05530;Name=IXO1104_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05530;old_locus_tag=IXO1104_05480 NZ_CP047492.1 Protein Homology CDS 1187346 1187993 . - 0 ID=cds-WP_075240148.1;Parent=gene-IXO1104_RS05530;Dbxref=Genbank:WP_075240148.1;Name=WP_075240148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407771.1;locus_tag=IXO1104_RS05530;product=aldo/keto reductase;protein_id=WP_075240148.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1188293 1189195 . + . ID=gene-IXO1104_RS05535;Name=IXO1104_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05535;old_locus_tag=IXO1104_05485 NZ_CP047492.1 Protein Homology CDS 1188293 1189195 . + 0 ID=cds-WP_012445886.1;Parent=gene-IXO1104_RS05535;Dbxref=Genbank:WP_012445886.1;Name=WP_012445886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159489.1;locus_tag=IXO1104_RS05535;product=LysR family transcriptional regulator;protein_id=WP_012445886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1189187 1189966 . - . ID=gene-IXO1104_RS05540;Name=IXO1104_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05540;old_locus_tag=IXO1104_05490 NZ_CP047492.1 Protein Homology CDS 1189187 1189966 . - 0 ID=cds-WP_011257955.1;Parent=gene-IXO1104_RS05540;Dbxref=Genbank:WP_011257955.1;Name=WP_011257955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376702.1;locus_tag=IXO1104_RS05540;product=substrate-binding domain-containing protein;protein_id=WP_011257955.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1189963 1191312 . - . ID=gene-IXO1104_RS05545;Name=IXO1104_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05545;old_locus_tag=IXO1104_05495 NZ_CP047492.1 Protein Homology CDS 1189963 1191312 . - 0 ID=cds-WP_075240146.1;Parent=gene-IXO1104_RS05545;Dbxref=Genbank:WP_075240146.1;Name=WP_075240146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157488.1;locus_tag=IXO1104_RS05545;product=MFS transporter;protein_id=WP_075240146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1191628 1194273 . - . ID=gene-IXO1104_RS05550;Name=IXO1104_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05550;old_locus_tag=IXO1104_05500 NZ_CP047492.1 Protein Homology CDS 1191628 1194273 . - 0 ID=cds-WP_075240147.1;Parent=gene-IXO1104_RS05550;Dbxref=Genbank:WP_075240147.1;Name=WP_075240147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160257.1;locus_tag=IXO1104_RS05550;product=PAS-domain containing protein;protein_id=WP_075240147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1194381 1194456 . + . ID=gene-IXO1104_RS05555;Name=IXO1104_RS05555;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05555;old_locus_tag=IXO1104_05505 NZ_CP047492.1 cmsearch ncRNA 1194381 1194456 . + . ID=rna-IXO1104_RS05555;Parent=gene-IXO1104_RS05555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05555;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1194381 1194456 . + . ID=exon-IXO1104_RS05555-1;Parent=rna-IXO1104_RS05555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05555;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1194595 1195767 . - . ID=gene-IXO1104_RS05560;Name=IXO1104_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05560;old_locus_tag=IXO1104_05510 NZ_CP047492.1 Protein Homology CDS 1194595 1195767 . - 0 ID=cds-WP_011407774.1;Parent=gene-IXO1104_RS05560;Dbxref=Genbank:WP_011407774.1;Name=WP_011407774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964505.1;locus_tag=IXO1104_RS05560;product=porin;protein_id=WP_011407774.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1196058 1197431 . + . ID=gene-IXO1104_RS05565;Name=IXO1104_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05565;old_locus_tag=IXO1104_05515 NZ_CP047492.1 Protein Homology CDS 1196058 1197431 . + 0 ID=cds-WP_011407775.1;Parent=gene-IXO1104_RS05565;Dbxref=Genbank:WP_011407775.1;Name=WP_011407775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928723.1;locus_tag=IXO1104_RS05565;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_011407775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1197629 1199938 . + . ID=gene-IXO1104_RS05570;Name=IXO1104_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05570;old_locus_tag=IXO1104_05520 NZ_CP047492.1 Protein Homology CDS 1197629 1199938 . + 0 ID=cds-WP_011257960.1;Parent=gene-IXO1104_RS05570;Dbxref=Genbank:WP_011257960.1;Name=WP_011257960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157485.1;locus_tag=IXO1104_RS05570;product=NADP-dependent malic enzyme;protein_id=WP_011257960.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1200369 1201585 . - . ID=gene-IXO1104_RS05575;Name=IXO1104_RS05575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05575;old_locus_tag=IXO1104_05525;pseudo=true NZ_CP047492.1 Protein Homology CDS 1200369 1201585 . - 0 ID=cds-IXO1104_RS05575;Parent=gene-IXO1104_RS05575;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS05575;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1201710 1201925 . - . ID=gene-IXO1104_RS05580;Name=IXO1104_RS05580;end_range=1201925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05580;old_locus_tag=IXO1104_05530;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1201710 1201925 . - 0 ID=cds-IXO1104_RS05580;Parent=gene-IXO1104_RS05580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1201925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS05580;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1201944 1203419 . - . ID=gene-IXO1104_RS05585;Name=IXO1104_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05585;old_locus_tag=IXO1104_05535 NZ_CP047492.1 Protein Homology CDS 1201944 1203419 . - 0 ID=cds-WP_263109043.1;Parent=gene-IXO1104_RS05585;Dbxref=Genbank:WP_263109043.1;Name=WP_263109043.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS05585;product=IS5-like element ISXoo5 family transposase;protein_id=WP_263109043.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1203571 1204677 . - . ID=gene-IXO1104_RS05590;Name=IXO1104_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05590;old_locus_tag=IXO1104_05540 NZ_CP047492.1 Protein Homology CDS 1203571 1204677 . - 0 ID=cds-WP_237384719.1;Parent=gene-IXO1104_RS05590;Dbxref=Genbank:WP_237384719.1;Name=WP_237384719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=IXO1104_RS05590;product=tape measure protein;protein_id=WP_237384719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1204892 1205410 . - . ID=gene-IXO1104_RS05595;Name=IXO1104_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05595;old_locus_tag=IXO1104_05545 NZ_CP047492.1 GeneMarkS-2+ CDS 1204892 1205410 . - 0 ID=cds-WP_075239098.1;Parent=gene-IXO1104_RS05595;Dbxref=Genbank:WP_075239098.1;Name=WP_075239098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05595;product=hypothetical protein;protein_id=WP_075239098.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1205425 1206492 . - . ID=gene-IXO1104_RS05600;Name=IXO1104_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05600;old_locus_tag=IXO1104_05550 NZ_CP047492.1 GeneMarkS-2+ CDS 1205425 1206492 . - 0 ID=cds-WP_133264555.1;Parent=gene-IXO1104_RS05600;Dbxref=Genbank:WP_133264555.1;Name=WP_133264555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05600;product=hypothetical protein;protein_id=WP_133264555.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1206495 1207385 . - . ID=gene-IXO1104_RS05605;Name=IXO1104_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05605;old_locus_tag=IXO1104_05555 NZ_CP047492.1 GeneMarkS-2+ CDS 1206495 1207385 . - 0 ID=cds-WP_143700619.1;Parent=gene-IXO1104_RS05605;Dbxref=Genbank:WP_143700619.1;Name=WP_143700619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05605;product=radical SAM protein;protein_id=WP_143700619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1207603 1207749 . - . ID=gene-IXO1104_RS05610;Name=IXO1104_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05610;old_locus_tag=IXO1104_05560 NZ_CP047492.1 Protein Homology CDS 1207603 1207749 . - 0 ID=cds-WP_241846850.1;Parent=gene-IXO1104_RS05610;Dbxref=Genbank:WP_241846850.1;Name=WP_241846850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=IXO1104_RS05610;product=hypothetical protein;protein_id=WP_241846850.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1208126 1209503 . + . ID=gene-IXO1104_RS05615;Name=IXO1104_RS05615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05615;old_locus_tag=IXO1104_05565;pseudo=true NZ_CP047492.1 Protein Homology CDS 1208126 1209503 . + 0 ID=cds-IXO1104_RS05615;Parent=gene-IXO1104_RS05615;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS05615;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1209537 1210768 . - . ID=gene-IXO1104_RS05620;Name=IXO1104_RS05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05620;old_locus_tag=IXO1104_05570;pseudo=true NZ_CP047492.1 Protein Homology CDS 1209537 1210768 . - 0 ID=cds-IXO1104_RS05620;Parent=gene-IXO1104_RS05620;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=IXO1104_RS05620;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 cmsearch sequence_feature 1210377 1210493 . - . ID=id-IXO1104_RS05620;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05620;pseudo=true NZ_CP047492.1 RefSeq pseudogene 1210819 1211049 . - . ID=gene-IXO1104_RS05625;Name=IXO1104_RS05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05625;old_locus_tag=IXO1104_05575;partial=true;pseudo=true;start_range=.,1210819 NZ_CP047492.1 Protein Homology CDS 1210819 1211049 . - 0 ID=cds-IXO1104_RS05625;Parent=gene-IXO1104_RS05625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611821.1;locus_tag=IXO1104_RS05625;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1210819;transl_table=11 NZ_CP047492.1 RefSeq gene 1211110 1211733 . - . ID=gene-IXO1104_RS05630;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=IXO1104_RS05630;old_locus_tag=IXO1104_05580 NZ_CP047492.1 Protein Homology CDS 1211110 1211733 . - 0 ID=cds-WP_075240112.1;Parent=gene-IXO1104_RS05630;Dbxref=Genbank:WP_075240112.1;Name=WP_075240112.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112972.1;locus_tag=IXO1104_RS05630;product=thiamine phosphate synthase;protein_id=WP_075240112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1211757 1211996 . + . ID=gene-IXO1104_RS05635;Name=IXO1104_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05635;old_locus_tag=IXO1104_05585 NZ_CP047492.1 Protein Homology CDS 1211757 1211996 . + 0 ID=cds-WP_011257965.1;Parent=gene-IXO1104_RS05635;Dbxref=Genbank:WP_011257965.1;Name=WP_011257965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112973.1;locus_tag=IXO1104_RS05635;product=rubredoxin;protein_id=WP_011257965.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1212046 1212927 . - . ID=gene-IXO1104_RS05640;Name=IXO1104_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05640;old_locus_tag=IXO1104_05590 NZ_CP047492.1 Protein Homology CDS 1212046 1212927 . - 0 ID=cds-WP_011257966.1;Parent=gene-IXO1104_RS05640;Dbxref=Genbank:WP_011257966.1;Name=WP_011257966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851075.1;locus_tag=IXO1104_RS05640;product=SirB1 family protein;protein_id=WP_011257966.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1213077 1213526 . - . ID=gene-IXO1104_RS05645;Name=IXO1104_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05645;old_locus_tag=IXO1104_05595 NZ_CP047492.1 Protein Homology CDS 1213077 1213526 . - 0 ID=cds-WP_011407780.1;Parent=gene-IXO1104_RS05645;Dbxref=Genbank:WP_011407780.1;Name=WP_011407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967674.1;locus_tag=IXO1104_RS05645;product=DUF192 domain-containing protein;protein_id=WP_011407780.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1213677 1214324 . - . ID=gene-IXO1104_RS05650;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=IXO1104_RS05650;old_locus_tag=IXO1104_05600 NZ_CP047492.1 Protein Homology CDS 1213677 1214324 . - 0 ID=cds-WP_011257968.1;Parent=gene-IXO1104_RS05650;Dbxref=Genbank:WP_011257968.1;Name=WP_011257968.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994531.1;locus_tag=IXO1104_RS05650;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_011257968.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1214416 1214886 . - . ID=gene-IXO1104_RS05655;Name=IXO1104_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05655;old_locus_tag=IXO1104_05605 NZ_CP047492.1 Protein Homology CDS 1214416 1214886 . - 0 ID=cds-WP_011257969.1;Parent=gene-IXO1104_RS05655;Dbxref=Genbank:WP_011257969.1;Name=WP_011257969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812469.1;locus_tag=IXO1104_RS05655;product=EVE domain-containing protein;protein_id=WP_011257969.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1214883 1215473 . - . ID=gene-IXO1104_RS05660;Name=IXO1104_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05660;old_locus_tag=IXO1104_05610 NZ_CP047492.1 Protein Homology CDS 1214883 1215473 . - 0 ID=cds-WP_011407783.1;Parent=gene-IXO1104_RS05660;Dbxref=Genbank:WP_011407783.1;Name=WP_011407783.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090970.1;locus_tag=IXO1104_RS05660;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011407783.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1215803 1215986 . - . ID=gene-IXO1104_RS05665;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=IXO1104_RS05665;old_locus_tag=IXO1104_05615 NZ_CP047492.1 cmsearch ncRNA 1215803 1215986 . - . ID=rna-IXO1104_RS05665;Parent=gene-IXO1104_RS05665;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05665;product=6S RNA NZ_CP047492.1 cmsearch exon 1215803 1215986 . - . ID=exon-IXO1104_RS05665-1;Parent=rna-IXO1104_RS05665;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05665;product=6S RNA NZ_CP047492.1 RefSeq gene 1216082 1216381 . - . ID=gene-IXO1104_RS05670;Name=IXO1104_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05670;old_locus_tag=IXO1104_05620 NZ_CP047492.1 Protein Homology CDS 1216082 1216381 . - 0 ID=cds-WP_011257971.1;Parent=gene-IXO1104_RS05670;Dbxref=Genbank:WP_011257971.1;Name=WP_011257971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300828.1;locus_tag=IXO1104_RS05670;product=cell division protein ZapA;protein_id=WP_011257971.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1216378 1216599 . - . ID=gene-IXO1104_RS05675;Name=IXO1104_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05675;old_locus_tag=IXO1104_05625 NZ_CP047492.1 Protein Homology CDS 1216378 1216599 . - 0 ID=cds-WP_011407784.1;Parent=gene-IXO1104_RS05675;Dbxref=Genbank:WP_011407784.1;Name=WP_011407784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812462.1;locus_tag=IXO1104_RS05675;product=TIGR02449 family protein;protein_id=WP_011407784.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1216835 1217377 . + . ID=gene-IXO1104_RS05680;Name=IXO1104_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05680;old_locus_tag=IXO1104_05630 NZ_CP047492.1 Protein Homology CDS 1216835 1217377 . + 0 ID=cds-WP_011407785.1;Parent=gene-IXO1104_RS05680;Dbxref=Genbank:WP_011407785.1;Name=WP_011407785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156855.1;locus_tag=IXO1104_RS05680;product=YecA family protein;protein_id=WP_011407785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1217388 1218728 . + . ID=gene-IXO1104_RS05685;Name=IXO1104_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05685;old_locus_tag=IXO1104_05635 NZ_CP047492.1 Protein Homology CDS 1217388 1218728 . + 0 ID=cds-WP_011257974.1;Parent=gene-IXO1104_RS05685;Dbxref=Genbank:WP_011257974.1;Name=WP_011257974.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364488.1;locus_tag=IXO1104_RS05685;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_011257974.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1218913 1219314 . - . ID=gene-IXO1104_RS05690;Name=IXO1104_RS05690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05690;old_locus_tag=IXO1104_05640;pseudo=true NZ_CP047492.1 Protein Homology CDS 1218913 1219314 . - 0 ID=cds-IXO1104_RS05690;Parent=gene-IXO1104_RS05690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508836.1;locus_tag=IXO1104_RS05690;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1219246 1219404 . + . ID=gene-IXO1104_RS05695;Name=IXO1104_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05695 NZ_CP047492.1 GeneMarkS-2+ CDS 1219246 1219404 . + 0 ID=cds-WP_162013040.1;Parent=gene-IXO1104_RS05695;Dbxref=Genbank:WP_162013040.1;Name=WP_162013040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS05695;product=hypothetical protein;protein_id=WP_162013040.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1219481 1219557 . + . ID=gene-IXO1104_RS05700;Name=IXO1104_RS05700;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05700;old_locus_tag=IXO1104_05645 NZ_CP047492.1 cmsearch ncRNA 1219481 1219557 . + . ID=rna-IXO1104_RS05700;Parent=gene-IXO1104_RS05700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05700;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1219481 1219557 . + . ID=exon-IXO1104_RS05700-1;Parent=rna-IXO1104_RS05700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05700;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1219616 1220941 . - . ID=gene-IXO1104_RS05705;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS05705;old_locus_tag=IXO1104_05650 NZ_CP047492.1 Protein Homology CDS 1219616 1220941 . - 0 ID=cds-WP_011257975.1;Parent=gene-IXO1104_RS05705;Dbxref=Genbank:WP_011257975.1;Name=WP_011257975.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926900.1;locus_tag=IXO1104_RS05705;product=Xaa-Pro dipeptidase;protein_id=WP_011257975.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1221140 1221487 . - . ID=gene-IXO1104_RS05710;Name=IXO1104_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05710;old_locus_tag=IXO1104_05655 NZ_CP047492.1 Protein Homology CDS 1221140 1221487 . - 0 ID=cds-WP_011257976.1;Parent=gene-IXO1104_RS05710;Dbxref=Genbank:WP_011257976.1;Name=WP_011257976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156859.1;locus_tag=IXO1104_RS05710;product=PilZ domain-containing protein;protein_id=WP_011257976.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1221484 1223892 . - . ID=gene-IXO1104_RS05715;Name=IXO1104_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05715;old_locus_tag=IXO1104_05660 NZ_CP047492.1 Protein Homology CDS 1221484 1223892 . - 0 ID=cds-WP_011407789.1;Parent=gene-IXO1104_RS05715;Dbxref=Genbank:WP_011407789.1;Name=WP_011407789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407789.1;locus_tag=IXO1104_RS05715;product=DUF1631 domain-containing protein;protein_id=WP_011407789.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1224071 1225228 . - . ID=gene-IXO1104_RS05720;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=IXO1104_RS05720;old_locus_tag=IXO1104_05665 NZ_CP047492.1 Protein Homology CDS 1224071 1225228 . - 0 ID=cds-WP_011257978.1;Parent=gene-IXO1104_RS05720;Dbxref=Genbank:WP_011257978.1;Name=WP_011257978.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504451.1;locus_tag=IXO1104_RS05720;product=radical SAM family heme chaperone HemW;protein_id=WP_011257978.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1225244 1225843 . - . ID=gene-IXO1104_RS05725;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=IXO1104_RS05725;old_locus_tag=IXO1104_05670 NZ_CP047492.1 Protein Homology CDS 1225244 1225843 . - 0 ID=cds-WP_075240628.1;Parent=gene-IXO1104_RS05725;Dbxref=Genbank:WP_075240628.1;Name=WP_075240628.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162718.1;locus_tag=IXO1104_RS05725;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_075240628.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1225840 1226235 . - . ID=gene-IXO1104_RS05730;Name=IXO1104_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05730;old_locus_tag=IXO1104_05675 NZ_CP047492.1 Protein Homology CDS 1225840 1226235 . - 0 ID=cds-WP_075240629.1;Parent=gene-IXO1104_RS05730;Dbxref=Genbank:WP_075240629.1;Name=WP_075240629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156863.1;locus_tag=IXO1104_RS05730;product=VOC family protein;protein_id=WP_075240629.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1226232 1226957 . - . ID=gene-IXO1104_RS05735;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=IXO1104_RS05735;old_locus_tag=IXO1104_05680 NZ_CP047492.1 Protein Homology CDS 1226232 1226957 . - 0 ID=cds-WP_024711476.1;Parent=gene-IXO1104_RS05735;Dbxref=Genbank:WP_024711476.1;Name=WP_024711476.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926909.1;locus_tag=IXO1104_RS05735;product=ribonuclease PH;protein_id=WP_024711476.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1227067 1227927 . + . ID=gene-IXO1104_RS05740;Name=IXO1104_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05740;old_locus_tag=IXO1104_05685 NZ_CP047492.1 Protein Homology CDS 1227067 1227927 . + 0 ID=cds-WP_011257982.1;Parent=gene-IXO1104_RS05740;Dbxref=Genbank:WP_011257982.1;Name=WP_011257982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996763.1;locus_tag=IXO1104_RS05740;product=YicC family protein;protein_id=WP_011257982.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1228044 1228655 . + . ID=gene-IXO1104_RS05745;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=IXO1104_RS05745;old_locus_tag=IXO1104_05690 NZ_CP047492.1 Protein Homology CDS 1228044 1228655 . + 0 ID=cds-WP_011257983.1;Parent=gene-IXO1104_RS05745;Dbxref=Genbank:WP_011257983.1;Name=WP_011257983.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377105.1;locus_tag=IXO1104_RS05745;product=guanylate kinase;protein_id=WP_011257983.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1228713 1228788 . + . ID=gene-IXO1104_RS05750;Name=IXO1104_RS05750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05750;old_locus_tag=IXO1104_05695 NZ_CP047492.1 cmsearch ncRNA 1228713 1228788 . + . ID=rna-IXO1104_RS05750;Parent=gene-IXO1104_RS05750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05750;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1228713 1228788 . + . ID=exon-IXO1104_RS05750-1;Parent=rna-IXO1104_RS05750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05750;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1228836 1229634 . + . ID=gene-IXO1104_RS05755;Name=IXO1104_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05755;old_locus_tag=IXO1104_05700 NZ_CP047492.1 Protein Homology CDS 1228836 1229107 . + 0 ID=cds-WP_094187796.1;Parent=gene-IXO1104_RS05755;Dbxref=Genbank:WP_094187796.1;Name=WP_094187796.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS05755;product=IS5 family transposase;protein_id=WP_094187796.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1229106 1229634 . + 1 ID=cds-WP_094187796.1;Parent=gene-IXO1104_RS05755;Dbxref=Genbank:WP_094187796.1;Name=WP_094187796.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS05755;product=IS5 family transposase;protein_id=WP_094187796.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1229782 1230081 . + . ID=gene-IXO1104_RS05760;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS05760;old_locus_tag=IXO1104_05705 NZ_CP047492.1 Protein Homology CDS 1229782 1230081 . + 0 ID=cds-WP_011407791.1;Parent=gene-IXO1104_RS05760;Dbxref=Genbank:WP_011407791.1;Name=WP_011407791.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=IXO1104_RS05760;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_011407791.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1230210 1232381 . + . ID=gene-IXO1104_RS05765;Name=IXO1104_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05765;old_locus_tag=IXO1104_05710 NZ_CP047492.1 Protein Homology CDS 1230210 1232381 . + 0 ID=cds-WP_011257986.1;Parent=gene-IXO1104_RS05765;Dbxref=Genbank:WP_011257986.1;Name=WP_011257986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269543.1;locus_tag=IXO1104_RS05765;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_011257986.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1232461 1232841 . + . ID=gene-IXO1104_RS05770;Name=IXO1104_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05770;old_locus_tag=IXO1104_05715 NZ_CP047492.1 Protein Homology CDS 1232461 1232841 . + 0 ID=cds-WP_011257987.1;Parent=gene-IXO1104_RS05770;Dbxref=Genbank:WP_011257987.1;Name=WP_011257987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486159.1;locus_tag=IXO1104_RS05770;product=RidA family protein;protein_id=WP_011257987.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1232862 1235015 . + . ID=gene-IXO1104_RS05775;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=IXO1104_RS05775;old_locus_tag=IXO1104_05720 NZ_CP047492.1 Protein Homology CDS 1232862 1235015 . + 0 ID=cds-WP_011257988.1;Parent=gene-IXO1104_RS05775;Dbxref=Genbank:WP_011257988.1;Name=WP_011257988.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161420.1;locus_tag=IXO1104_RS05775;product=ATP-dependent DNA helicase RecG;protein_id=WP_011257988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1235141 1236079 . + . ID=gene-IXO1104_RS05780;Name=IXO1104_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05780;old_locus_tag=IXO1104_05725 NZ_CP047492.1 Protein Homology CDS 1235141 1236079 . + 0 ID=cds-WP_012445867.1;Parent=gene-IXO1104_RS05780;Dbxref=Genbank:WP_012445867.1;Name=WP_012445867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169423.1;locus_tag=IXO1104_RS05780;product=nucleoside hydrolase;protein_id=WP_012445867.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1236151 1236393 . + . ID=gene-IXO1104_RS05785;Name=IXO1104_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05785;old_locus_tag=IXO1104_05730 NZ_CP047492.1 Protein Homology CDS 1236151 1236393 . + 0 ID=cds-WP_005911911.1;Parent=gene-IXO1104_RS05785;Dbxref=Genbank:WP_005911911.1;Name=WP_005911911.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156869.1;locus_tag=IXO1104_RS05785;product=type B 50S ribosomal protein L31;protein_id=WP_005911911.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1236607 1237896 . + . ID=gene-IXO1104_RS05790;Name=IXO1104_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05790;old_locus_tag=IXO1104_05735 NZ_CP047492.1 Protein Homology CDS 1236607 1237896 . + 0 ID=cds-WP_011407793.1;Parent=gene-IXO1104_RS05790;Dbxref=Genbank:WP_011407793.1;Name=WP_011407793.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156870.1;locus_tag=IXO1104_RS05790;product=citrate synthase;protein_id=WP_011407793.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1238271 1238921 . - . ID=gene-IXO1104_RS05795;Name=IXO1104_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05795;old_locus_tag=IXO1104_05740 NZ_CP047492.1 Protein Homology CDS 1238271 1238921 . - 0 ID=cds-WP_011407794.1;Parent=gene-IXO1104_RS05795;Dbxref=Genbank:WP_011407794.1;Name=WP_011407794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407794.1;locus_tag=IXO1104_RS05795;product=hypothetical protein;protein_id=WP_011407794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1239231 1241660 . - . ID=gene-IXO1104_RS05800;Name=IXO1104_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05800;old_locus_tag=IXO1104_05745 NZ_CP047492.1 Protein Homology CDS 1239231 1241660 . - 0 ID=cds-WP_011257992.1;Parent=gene-IXO1104_RS05800;Dbxref=Genbank:WP_011257992.1;Name=WP_011257992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812411.1;locus_tag=IXO1104_RS05800;product=penicillin-binding protein 1A;protein_id=WP_011257992.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1241852 1242934 . + . ID=gene-IXO1104_RS05805;Name=IXO1104_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05805;old_locus_tag=IXO1104_05750 NZ_CP047492.1 Protein Homology CDS 1241852 1242934 . + 0 ID=cds-WP_027703769.1;Parent=gene-IXO1104_RS05805;Dbxref=Genbank:WP_027703769.1;Name=WP_027703769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974443.1;locus_tag=IXO1104_RS05805;product=pilus assembly protein PilM;protein_id=WP_027703769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1242934 1243692 . + . ID=gene-IXO1104_RS05810;Name=IXO1104_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05810;old_locus_tag=IXO1104_05755 NZ_CP047492.1 Protein Homology CDS 1242934 1243692 . + 0 ID=cds-WP_011257994.1;Parent=gene-IXO1104_RS05810;Dbxref=Genbank:WP_011257994.1;Name=WP_011257994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911890.1;locus_tag=IXO1104_RS05810;product=PilN domain-containing protein;protein_id=WP_011257994.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1243689 1244354 . + . ID=gene-IXO1104_RS05815;Name=IXO1104_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05815;old_locus_tag=IXO1104_05760 NZ_CP047492.1 Protein Homology CDS 1243689 1244354 . + 0 ID=cds-WP_011257995.1;Parent=gene-IXO1104_RS05815;Dbxref=Genbank:WP_011257995.1;Name=WP_011257995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903585.1;locus_tag=IXO1104_RS05815;product=type 4a pilus biogenesis protein PilO;protein_id=WP_011257995.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1244351 1244884 . + . ID=gene-IXO1104_RS05820;Name=IXO1104_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05820;old_locus_tag=IXO1104_05765 NZ_CP047492.1 Protein Homology CDS 1244351 1244884 . + 0 ID=cds-WP_011257996.1;Parent=gene-IXO1104_RS05820;Dbxref=Genbank:WP_011257996.1;Name=WP_011257996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364547.1;locus_tag=IXO1104_RS05820;product=pilus assembly protein PilP;protein_id=WP_011257996.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1244904 1246853 . + . ID=gene-IXO1104_RS05825;Name=IXO1104_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05825;old_locus_tag=IXO1104_05770 NZ_CP047492.1 Protein Homology CDS 1244904 1246853 . + 0 ID=cds-WP_011407796.1;Parent=gene-IXO1104_RS05825;Dbxref=Genbank:WP_011407796.1;Name=WP_011407796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038331.1;locus_tag=IXO1104_RS05825;product=type IV pilus secretin PilQ family protein;protein_id=WP_011407796.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1247006 1248033 . - . ID=gene-IXO1104_RS05830;Name=IXO1104_RS05830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05830;old_locus_tag=IXO1104_05775;partial=true;pseudo=true;start_range=.,1247006 NZ_CP047492.1 Protein Homology CDS 1247006 1248033 . - 0 ID=cds-IXO1104_RS05830;Parent=gene-IXO1104_RS05830;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1104_RS05830;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1247006;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1248059 1248334 . - . ID=gene-IXO1104_RS05835;Name=IXO1104_RS05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05835;old_locus_tag=IXO1104_05780;partial=true;pseudo=true;start_range=.,1248059 NZ_CP047492.1 Protein Homology CDS 1248059 1248334 . - 0 ID=cds-IXO1104_RS05835;Parent=gene-IXO1104_RS05835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS05835;partial=true;product=transposase;pseudo=true;start_range=.,1248059;transl_table=11 NZ_CP047492.1 RefSeq gene 1248656 1249675 . + . ID=gene-IXO1104_RS05840;Name=IXO1104_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05840;old_locus_tag=IXO1104_05785 NZ_CP047492.1 Protein Homology CDS 1248656 1249675 . + 0 ID=cds-WP_012445859.1;Parent=gene-IXO1104_RS05840;Dbxref=Genbank:WP_012445859.1;Name=WP_012445859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166368.1;locus_tag=IXO1104_RS05840;product=MoxR family ATPase;protein_id=WP_012445859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1249696 1250658 . + . ID=gene-IXO1104_RS05845;Name=IXO1104_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05845;old_locus_tag=IXO1104_05790 NZ_CP047492.1 Protein Homology CDS 1249696 1250658 . + 0 ID=cds-WP_011258001.1;Parent=gene-IXO1104_RS05845;Dbxref=Genbank:WP_011258001.1;Name=WP_011258001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161784.1;locus_tag=IXO1104_RS05845;product=DUF58 domain-containing protein;protein_id=WP_011258001.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1250661 1251122 . + . ID=gene-IXO1104_RS05850;Name=IXO1104_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05850;old_locus_tag=IXO1104_05795 NZ_CP047492.1 Protein Homology CDS 1250661 1251122 . + 0 ID=cds-WP_011258002.1;Parent=gene-IXO1104_RS05850;Dbxref=Genbank:WP_011258002.1;Name=WP_011258002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486191.1;locus_tag=IXO1104_RS05850;product=DUF4381 domain-containing protein;protein_id=WP_011258002.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1251119 1252126 . + . ID=gene-IXO1104_RS05855;Name=IXO1104_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05855;old_locus_tag=IXO1104_05800 NZ_CP047492.1 Protein Homology CDS 1251119 1252126 . + 0 ID=cds-WP_011258003.1;Parent=gene-IXO1104_RS05855;Dbxref=Genbank:WP_011258003.1;Name=WP_011258003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995820.1;locus_tag=IXO1104_RS05855;product=VWA domain-containing protein;protein_id=WP_011258003.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1252123 1253940 . + . ID=gene-IXO1104_RS05860;Name=IXO1104_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05860;old_locus_tag=IXO1104_05805 NZ_CP047492.1 Protein Homology CDS 1252123 1253940 . + 0 ID=cds-WP_027703586.1;Parent=gene-IXO1104_RS05860;Dbxref=Genbank:WP_027703586.1;Name=WP_027703586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575858.1;locus_tag=IXO1104_RS05860;product=VWA domain-containing protein;protein_id=WP_027703586.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1253937 1255694 . + . ID=gene-IXO1104_RS05865;Name=IXO1104_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05865;old_locus_tag=IXO1104_05810 NZ_CP047492.1 Protein Homology CDS 1253937 1255694 . + 0 ID=cds-WP_011407804.1;Parent=gene-IXO1104_RS05865;Dbxref=Genbank:WP_011407804.1;Name=WP_011407804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407804.1;locus_tag=IXO1104_RS05865;product=BatD family protein;protein_id=WP_011407804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1255746 1255822 . + . ID=gene-IXO1104_RS05870;Name=IXO1104_RS05870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS05870;old_locus_tag=IXO1104_05815 NZ_CP047492.1 cmsearch ncRNA 1255746 1255822 . + . ID=rna-IXO1104_RS05870;Parent=gene-IXO1104_RS05870;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05870;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1255746 1255822 . + . ID=exon-IXO1104_RS05870-1;Parent=rna-IXO1104_RS05870;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS05870;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1255990 1256307 . + . ID=gene-IXO1104_RS05875;Name=IXO1104_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05875;old_locus_tag=IXO1104_05820 NZ_CP047492.1 Protein Homology CDS 1255990 1256307 . + 0 ID=cds-WP_033013273.1;Parent=gene-IXO1104_RS05875;Dbxref=Genbank:WP_033013273.1;Name=WP_033013273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023812.2;locus_tag=IXO1104_RS05875;product=hypothetical protein;protein_id=WP_033013273.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1256505 1257785 . + . ID=gene-IXO1104_RS05880;Name=IXO1104_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05880;old_locus_tag=IXO1104_05825 NZ_CP047492.1 Protein Homology CDS 1256505 1257785 . + 0 ID=cds-WP_027703585.1;Parent=gene-IXO1104_RS05880;Dbxref=Genbank:WP_027703585.1;Name=WP_027703585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472649.1;locus_tag=IXO1104_RS05880;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_027703585.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1258012 1260012 . + . ID=gene-IXO1104_RS05885;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=IXO1104_RS05885;old_locus_tag=IXO1104_05830 NZ_CP047492.1 Protein Homology CDS 1258012 1260012 . + 0 ID=cds-WP_011258007.1;Parent=gene-IXO1104_RS05885;Dbxref=Genbank:WP_011258007.1;Name=WP_011258007.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348449.1;locus_tag=IXO1104_RS05885;product=transketolase;protein_id=WP_011258007.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1260239 1260649 . + . ID=gene-IXO1104_RS05890;Name=IXO1104_RS05890;end_range=1260649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05890;old_locus_tag=IXO1104_05835;partial=true;pseudo=true;start_range=.,1260239 NZ_CP047492.1 Protein Homology CDS 1260239 1260649 . + 0 ID=cds-IXO1104_RS05890;Parent=gene-IXO1104_RS05890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1260649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911863.1;locus_tag=IXO1104_RS05890;partial=true;product=outer membrane receptor protein;pseudo=true;start_range=.,1260239;transl_table=11 NZ_CP047492.1 RefSeq gene 1260831 1261547 . - . ID=gene-IXO1104_RS05895;Name=IXO1104_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05895;old_locus_tag=IXO1104_05840 NZ_CP047492.1 Protein Homology CDS 1260831 1261547 . - 0 ID=cds-WP_011258009.1;Parent=gene-IXO1104_RS05895;Dbxref=Genbank:WP_011258009.1;Name=WP_011258009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156889.1;locus_tag=IXO1104_RS05895;product=M23 family metallopeptidase;protein_id=WP_011258009.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1261550 1262479 . - . ID=gene-IXO1104_RS05900;Name=IXO1104_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05900;old_locus_tag=IXO1104_05845 NZ_CP047492.1 Protein Homology CDS 1261550 1262479 . - 0 ID=cds-WP_075239972.1;Parent=gene-IXO1104_RS05900;Dbxref=Genbank:WP_075239972.1;Name=WP_075239972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156890.1;locus_tag=IXO1104_RS05900;product=L%2CD-transpeptidase;protein_id=WP_075239972.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1262862 1265576 . - . ID=gene-IXO1104_RS05905;Name=IXO1104_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05905;old_locus_tag=IXO1104_05850 NZ_CP047492.1 Protein Homology CDS 1262862 1265576 . - 0 ID=cds-WP_075239970.1;Parent=gene-IXO1104_RS05905;Dbxref=Genbank:WP_075239970.1;Name=WP_075239970.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377055.1;locus_tag=IXO1104_RS05905;product=TonB-dependent receptor;protein_id=WP_075239970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1265706 1266881 . - . ID=gene-IXO1104_RS05910;Name=IXO1104_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05910;old_locus_tag=IXO1104_05855 NZ_CP047492.1 Protein Homology CDS 1265706 1266881 . - 0 ID=cds-WP_075239969.1;Parent=gene-IXO1104_RS05910;Dbxref=Genbank:WP_075239969.1;Name=WP_075239969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348442.1;locus_tag=IXO1104_RS05910;product=phosphatidylinositol-specific phospholipase C1-like protein;protein_id=WP_075239969.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1267016 1268974 . - . ID=gene-IXO1104_RS05915;Name=IXO1104_RS05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05915;old_locus_tag=IXO1104_05860;pseudo=true NZ_CP047492.1 Protein Homology CDS 1267016 1268974 . - 0 ID=cds-IXO1104_RS05915;Parent=gene-IXO1104_RS05915;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504414.1;locus_tag=IXO1104_RS05915;product=acetyl-CoA hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1269150 1269797 . + . ID=gene-IXO1104_RS05920;Name=IXO1104_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05920;old_locus_tag=IXO1104_05865 NZ_CP047492.1 Protein Homology CDS 1269150 1269797 . + 0 ID=cds-WP_027703582.1;Parent=gene-IXO1104_RS05920;Dbxref=Genbank:WP_027703582.1;Name=WP_027703582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156894.1;locus_tag=IXO1104_RS05920;product=thermostable hemolysin;protein_id=WP_027703582.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1269794 1271293 . + . ID=gene-IXO1104_RS05925;Name=IXO1104_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05925;old_locus_tag=IXO1104_05870 NZ_CP047492.1 Protein Homology CDS 1269794 1271293 . + 0 ID=cds-WP_027703581.1;Parent=gene-IXO1104_RS05925;Dbxref=Genbank:WP_027703581.1;Name=WP_027703581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156895.1;locus_tag=IXO1104_RS05925;product=AMP-binding protein;protein_id=WP_027703581.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1271290 1271964 . + . ID=gene-IXO1104_RS05930;Name=IXO1104_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05930;old_locus_tag=IXO1104_05875 NZ_CP047492.1 Protein Homology CDS 1271290 1271964 . + 0 ID=cds-WP_011407814.1;Parent=gene-IXO1104_RS05930;Dbxref=Genbank:WP_011407814.1;Name=WP_011407814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407814.1;locus_tag=IXO1104_RS05930;product=iron-containing redox enzyme family protein;protein_id=WP_011407814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1271964 1272803 . + . ID=gene-IXO1104_RS05935;Name=IXO1104_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05935;old_locus_tag=IXO1104_05880 NZ_CP047492.1 Protein Homology CDS 1271964 1272803 . + 0 ID=cds-WP_011407815.1;Parent=gene-IXO1104_RS05935;Dbxref=Genbank:WP_011407815.1;Name=WP_011407815.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160090.1;locus_tag=IXO1104_RS05935;product=SDR family oxidoreductase;protein_id=WP_011407815.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1272784 1273440 . + . ID=gene-IXO1104_RS05940;Name=IXO1104_RS05940;end_range=1273440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05940;old_locus_tag=IXO1104_05885;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1272784 1273440 . + 0 ID=cds-IXO1104_RS05940;Parent=gene-IXO1104_RS05940;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1273440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156898.1;locus_tag=IXO1104_RS05940;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1273470 1274168 . + . ID=gene-IXO1104_RS05945;Name=IXO1104_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05945;old_locus_tag=IXO1104_05890 NZ_CP047492.1 Protein Homology CDS 1273470 1274168 . + 0 ID=cds-WP_011407818.1;Parent=gene-IXO1104_RS05945;Dbxref=Genbank:WP_011407818.1;Name=WP_011407818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407818.1;locus_tag=IXO1104_RS05945;product=response regulator transcription factor;protein_id=WP_011407818.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1274186 1275547 . + . ID=gene-IXO1104_RS05950;Name=IXO1104_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05950;old_locus_tag=IXO1104_05895 NZ_CP047492.1 Protein Homology CDS 1274186 1275547 . + 0 ID=cds-WP_041182938.1;Parent=gene-IXO1104_RS05950;Dbxref=Genbank:WP_041182938.1;Name=WP_041182938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258021.1;locus_tag=IXO1104_RS05950;product=ATP-binding protein;protein_id=WP_041182938.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1275647 1276012 . + . ID=gene-IXO1104_RS05955;Name=IXO1104_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05955;old_locus_tag=IXO1104_05900 NZ_CP047492.1 Protein Homology CDS 1275647 1276012 . + 0 ID=cds-WP_011407820.1;Parent=gene-IXO1104_RS05955;Dbxref=Genbank:WP_011407820.1;Name=WP_011407820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156901.1;locus_tag=IXO1104_RS05955;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=WP_011407820.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1276002 1277324 . + . ID=gene-IXO1104_RS05960;Name=IXO1104_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05960;old_locus_tag=IXO1104_05905 NZ_CP047492.1 Protein Homology CDS 1276002 1277324 . + 0 ID=cds-WP_075240387.1;Parent=gene-IXO1104_RS05960;Dbxref=Genbank:WP_075240387.1;Name=WP_075240387.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090943.1;locus_tag=IXO1104_RS05960;product=TonB family protein;protein_id=WP_075240387.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1277321 1277905 . + . ID=gene-IXO1104_RS05965;Name=IXO1104_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05965;old_locus_tag=IXO1104_05910 NZ_CP047492.1 Protein Homology CDS 1277321 1277905 . + 0 ID=cds-WP_011407822.1;Parent=gene-IXO1104_RS05965;Dbxref=Genbank:WP_011407822.1;Name=WP_011407822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156903.1;locus_tag=IXO1104_RS05965;product=hypothetical protein;protein_id=WP_011407822.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1278248 1278862 . - . ID=gene-IXO1104_RS05970;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=IXO1104_RS05970;old_locus_tag=IXO1104_05915 NZ_CP047492.1 Protein Homology CDS 1278248 1278862 . - 0 ID=cds-WP_011407823.1;Parent=gene-IXO1104_RS05970;Dbxref=Genbank:WP_011407823.1;Name=WP_011407823.1;Ontology_term=GO:0015689,GO:0005524,GO:0015412,GO:0009898,GO:0055052;gbkey=CDS;gene=modC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038308.1;locus_tag=IXO1104_RS05970;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_011407823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1278862 1279548 . - . ID=gene-IXO1104_RS05975;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=IXO1104_RS05975;old_locus_tag=IXO1104_05920 NZ_CP047492.1 Protein Homology CDS 1278862 1279548 . - 0 ID=cds-WP_027703578.1;Parent=gene-IXO1104_RS05975;Dbxref=Genbank:WP_027703578.1;Name=WP_027703578.1;Ontology_term=GO:0015689,GO:0015098,GO:0016021;gbkey=CDS;gene=modB;go_component=integral component of membrane|0016021||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116572.1;locus_tag=IXO1104_RS05975;product=molybdate ABC transporter permease subunit;protein_id=WP_027703578.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1279565 1280341 . - . ID=gene-IXO1104_RS05980;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=IXO1104_RS05980;old_locus_tag=IXO1104_05925 NZ_CP047492.1 Protein Homology CDS 1279565 1280341 . - 0 ID=cds-WP_075239967.1;Parent=gene-IXO1104_RS05980;Dbxref=Genbank:WP_075239967.1;Name=WP_075239967.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933035.1;locus_tag=IXO1104_RS05980;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_075239967.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1280412 1281242 . - . ID=gene-IXO1104_RS05985;Name=IXO1104_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05985;old_locus_tag=IXO1104_05930 NZ_CP047492.1 Protein Homology CDS 1280412 1281242 . - 0 ID=cds-WP_011258028.1;Parent=gene-IXO1104_RS05985;Dbxref=Genbank:WP_011258028.1;Name=WP_011258028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364600.1;locus_tag=IXO1104_RS05985;product=MBL fold metallo-hydrolase;protein_id=WP_011258028.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1281256 1282143 . - . ID=gene-IXO1104_RS05990;Name=IXO1104_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS05990;old_locus_tag=IXO1104_05935 NZ_CP047492.1 Protein Homology CDS 1281256 1282143 . - 0 ID=cds-WP_228383592.1;Parent=gene-IXO1104_RS05990;Dbxref=Genbank:WP_228383592.1;Name=WP_228383592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169326.1;locus_tag=IXO1104_RS05990;product=S1/P1 nuclease;protein_id=WP_228383592.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1282378 1283411 . + . ID=gene-IXO1104_RS05995;Name=IXO1104_RS05995;end_range=1283411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS05995;old_locus_tag=IXO1104_05940;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1282378 1283411 . + 0 ID=cds-IXO1104_RS05995;Parent=gene-IXO1104_RS05995;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1283411,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS05995;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1283434 1284468 . - . ID=gene-IXO1104_RS06000;Name=IXO1104_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06000;old_locus_tag=IXO1104_05945 NZ_CP047492.1 Protein Homology CDS 1283434 1284468 . - 0 ID=cds-WP_011407587.1;Parent=gene-IXO1104_RS06000;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1104_RS06000;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1284535 1284812 . + . ID=gene-IXO1104_RS06005;Name=IXO1104_RS06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06005;old_locus_tag=IXO1104_05950;partial=true;pseudo=true;start_range=.,1284535 NZ_CP047492.1 Protein Homology CDS 1284535 1284812 . + 0 ID=cds-IXO1104_RS06005;Parent=gene-IXO1104_RS06005;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS06005;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1284535;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1284896 1285488 . - . ID=gene-IXO1104_RS06010;Name=IXO1104_RS06010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06010;old_locus_tag=IXO1104_05955;pseudo=true NZ_CP047492.1 Protein Homology CDS 1284896 1285488 . - 0 ID=cds-IXO1104_RS06010;Parent=gene-IXO1104_RS06010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156909.1;locus_tag=IXO1104_RS06010;product=outer membrane beta-barrel protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1285607 1286194 . - . ID=gene-IXO1104_RS06015;Name=IXO1104_RS06015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06015;old_locus_tag=IXO1104_05960;pseudo=true NZ_CP047492.1 Protein Homology CDS 1285607 1286194 . - 0 ID=cds-IXO1104_RS06015;Parent=gene-IXO1104_RS06015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972397.1;locus_tag=IXO1104_RS06015;product=OmpW family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1286219 1286359 . + . ID=gene-IXO1104_RS06020;Name=IXO1104_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06020;old_locus_tag=IXO1104_05965 NZ_CP047492.1 GeneMarkS-2+ CDS 1286219 1286359 . + 0 ID=cds-WP_153296750.1;Parent=gene-IXO1104_RS06020;Dbxref=Genbank:WP_153296750.1;Name=WP_153296750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06020;product=hypothetical protein;protein_id=WP_153296750.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1287016 1288017 . + . ID=gene-IXO1104_RS06025;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=IXO1104_RS06025;old_locus_tag=IXO1104_05970 NZ_CP047492.1 Protein Homology CDS 1287016 1288017 . + 0 ID=cds-WP_011407830.1;Parent=gene-IXO1104_RS06025;Dbxref=Genbank:WP_011407830.1;Name=WP_011407830.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300876.1;locus_tag=IXO1104_RS06025;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011407830.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1288105 1288359 . - . ID=gene-IXO1104_RS06030;Name=IXO1104_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06030;old_locus_tag=IXO1104_05975 NZ_CP047492.1 GeneMarkS-2+ CDS 1288105 1288359 . - 0 ID=cds-WP_228329692.1;Parent=gene-IXO1104_RS06030;Dbxref=Genbank:WP_228329692.1;Name=WP_228329692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06030;product=hypothetical protein;protein_id=WP_228329692.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1288405 1289168 . + . ID=gene-IXO1104_RS06035;Name=IXO1104_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06035;old_locus_tag=IXO1104_05980 NZ_CP047492.1 Protein Homology CDS 1288405 1288720 . + 0 ID=cds-WP_094187715.1-4;Parent=gene-IXO1104_RS06035;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS06035;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1288720 1289168 . + 2 ID=cds-WP_094187715.1-4;Parent=gene-IXO1104_RS06035;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS06035;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1289257 1290222 . + . ID=gene-IXO1104_RS06040;Name=IXO1104_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06040;old_locus_tag=IXO1104_05985 NZ_CP047492.1 Protein Homology CDS 1289257 1290222 . + 0 ID=cds-WP_115877377.1;Parent=gene-IXO1104_RS06040;Dbxref=Genbank:WP_115877377.1;Name=WP_115877377.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS06040;product=IS1595 family transposase;protein_id=WP_115877377.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1290332 1291651 . - . ID=gene-IXO1104_RS06045;Name=IXO1104_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06045;old_locus_tag=IXO1104_05990 NZ_CP047492.1 Protein Homology CDS 1290332 1291651 . - 0 ID=cds-WP_027704076.1;Parent=gene-IXO1104_RS06045;Dbxref=Genbank:WP_027704076.1;Name=WP_027704076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237347.1;locus_tag=IXO1104_RS06045;product=HAMP domain-containing histidine kinase;protein_id=WP_027704076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1292114 1292791 . - . ID=gene-IXO1104_RS06050;Name=IXO1104_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06050;old_locus_tag=IXO1104_05995 NZ_CP047492.1 Protein Homology CDS 1292114 1292791 . - 0 ID=cds-WP_011407833.1;Parent=gene-IXO1104_RS06050;Dbxref=Genbank:WP_011407833.1;Name=WP_011407833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169438.1;locus_tag=IXO1104_RS06050;product=response regulator transcription factor;protein_id=WP_011407833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1292871 1293260 . - . ID=gene-IXO1104_RS06055;Name=IXO1104_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06055;old_locus_tag=IXO1104_06000 NZ_CP047492.1 Protein Homology CDS 1292871 1293260 . - 0 ID=cds-WP_027704066.1;Parent=gene-IXO1104_RS06055;Dbxref=Genbank:WP_027704066.1;Name=WP_027704066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116874.1;locus_tag=IXO1104_RS06055;product=hypothetical protein;protein_id=WP_027704066.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1293485 1294283 . - . ID=gene-IXO1104_RS06060;Name=IXO1104_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06060;old_locus_tag=IXO1104_06005 NZ_CP047492.1 Protein Homology CDS 1294012 1294283 . - 0 ID=cds-WP_094187728.1-3;Parent=gene-IXO1104_RS06060;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS06060;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1293485 1294013 . - 1 ID=cds-WP_094187728.1-3;Parent=gene-IXO1104_RS06060;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS06060;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1294326 1295243 . - . ID=gene-IXO1104_RS06065;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=IXO1104_RS06065;old_locus_tag=IXO1104_06010 NZ_CP047492.1 Protein Homology CDS 1294326 1295243 . - 0 ID=cds-WP_012445833.1;Parent=gene-IXO1104_RS06065;Dbxref=Genbank:WP_012445833.1;Name=WP_012445833.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504335.1;locus_tag=IXO1104_RS06065;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_012445833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1295647 1296627 . - . ID=gene-IXO1104_RS06070;Name=IXO1104_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06070;old_locus_tag=IXO1104_06015 NZ_CP047492.1 Protein Homology CDS 1295647 1296627 . - 0 ID=cds-WP_012445831.1;Parent=gene-IXO1104_RS06070;Dbxref=Genbank:WP_012445831.1;Name=WP_012445831.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS06070;product=IS5 family transposase;protein_id=WP_012445831.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1296802 1298889 . - . ID=gene-IXO1104_RS06075;Name=IXO1104_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06075;old_locus_tag=IXO1104_06020 NZ_CP047492.1 Protein Homology CDS 1296802 1298889 . - 0 ID=cds-WP_011407838.1;Parent=gene-IXO1104_RS06075;Dbxref=Genbank:WP_011407838.1;Name=WP_011407838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303233.1;locus_tag=IXO1104_RS06075;product=bifunctional DedA family/phosphatase PAP2 family protein;protein_id=WP_011407838.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1299041 1299700 . + . ID=gene-IXO1104_RS06080;Name=IXO1104_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06080;old_locus_tag=IXO1104_06025 NZ_CP047492.1 Protein Homology CDS 1299041 1299700 . + 0 ID=cds-WP_011407839.1;Parent=gene-IXO1104_RS06080;Dbxref=Genbank:WP_011407839.1;Name=WP_011407839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303234.1;locus_tag=IXO1104_RS06080;product=serine/threonine-protein kinase;protein_id=WP_011407839.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1299781 1300579 . + . ID=gene-IXO1104_RS06085;Name=IXO1104_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06085;old_locus_tag=IXO1104_06030 NZ_CP047492.1 Protein Homology CDS 1299781 1300052 . + 0 ID=cds-WP_094187758.1;Parent=gene-IXO1104_RS06085;Dbxref=Genbank:WP_094187758.1;Name=WP_094187758.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS06085;product=IS5 family transposase;protein_id=WP_094187758.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1300051 1300579 . + 1 ID=cds-WP_094187758.1;Parent=gene-IXO1104_RS06085;Dbxref=Genbank:WP_094187758.1;Name=WP_094187758.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS06085;product=IS5 family transposase;protein_id=WP_094187758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1300601 1300780 . + . ID=gene-IXO1104_RS06090;Name=IXO1104_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06090;old_locus_tag=IXO1104_06035 NZ_CP047492.1 Protein Homology CDS 1300601 1300780 . + 0 ID=cds-WP_075240398.1;Parent=gene-IXO1104_RS06090;Dbxref=Genbank:WP_075240398.1;Name=WP_075240398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301580.1;locus_tag=IXO1104_RS06090;product=hypothetical protein;protein_id=WP_075240398.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1300799 1301596 . + . ID=gene-IXO1104_RS06095;Name=IXO1104_RS06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06095;pseudo=true NZ_CP047492.1 Protein Homology CDS 1300799 1301596 . + 0 ID=cds-IXO1104_RS06095;Parent=gene-IXO1104_RS06095;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024293.2;locus_tag=IXO1104_RS06095;product=YiiG family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1301840 1302712 . - . ID=gene-IXO1104_RS06100;Name=IXO1104_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06100;old_locus_tag=IXO1104_06050 NZ_CP047492.1 Protein Homology CDS 1301840 1302712 . - 0 ID=cds-WP_011258047.1;Parent=gene-IXO1104_RS06100;Dbxref=Genbank:WP_011258047.1;Name=WP_011258047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911973.1;locus_tag=IXO1104_RS06100;product=ion transporter;protein_id=WP_011258047.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1302785 1304011 . + . ID=gene-IXO1104_RS06105;Name=IXO1104_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06105;old_locus_tag=IXO1104_06055 NZ_CP047492.1 Protein Homology CDS 1302785 1304011 . + 0 ID=cds-WP_011258048.1;Parent=gene-IXO1104_RS06105;Dbxref=Genbank:WP_011258048.1;Name=WP_011258048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258048.1;locus_tag=IXO1104_RS06105;product=acetylornithine transaminase;protein_id=WP_011258048.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1304257 1304874 . - . ID=gene-IXO1104_RS06110;Name=IXO1104_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06110;old_locus_tag=IXO1104_06060 NZ_CP047492.1 Protein Homology CDS 1304257 1304874 . - 0 ID=cds-WP_011407842.1;Parent=gene-IXO1104_RS06110;Dbxref=Genbank:WP_011407842.1;Name=WP_011407842.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577886.1;locus_tag=IXO1104_RS06110;product=HAD-IA family hydrolase;protein_id=WP_011407842.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1305206 1305334 . - . ID=gene-IXO1104_RS06115;Name=IXO1104_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06115 NZ_CP047492.1 GeneMarkS-2+ CDS 1305206 1305334 . - 0 ID=cds-WP_256364565.1;Parent=gene-IXO1104_RS06115;Dbxref=Genbank:WP_256364565.1;Name=WP_256364565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06115;product=hypothetical protein;protein_id=WP_256364565.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1305417 1306341 . + . ID=gene-IXO1104_RS06120;Name=IXO1104_RS06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06120;old_locus_tag=IXO1104_06065;partial=true;pseudo=true;start_range=.,1305417 NZ_CP047492.1 Protein Homology CDS 1305417 1306341 . + 0 ID=cds-IXO1104_RS06120;Parent=gene-IXO1104_RS06120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463573.1;locus_tag=IXO1104_RS06120;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,1305417;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1306411 1306863 . + . ID=gene-IXO1104_RS06125;Name=IXO1104_RS06125;end_range=1306863,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06125;old_locus_tag=IXO1104_06070;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1306411 1306863 . + 0 ID=cds-IXO1104_RS06125;Parent=gene-IXO1104_RS06125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;end_range=1306863,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851068.1;locus_tag=IXO1104_RS06125;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1306870 1307826 . - . ID=gene-IXO1104_RS06130;Name=IXO1104_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06130;old_locus_tag=IXO1104_06075 NZ_CP047492.1 Protein Homology CDS 1306870 1307826 . - 0 ID=cds-WP_041182545.1;Parent=gene-IXO1104_RS06130;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS06130;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1307919 1309076 . + . ID=gene-IXO1104_RS06135;Name=IXO1104_RS06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06135;old_locus_tag=IXO1104_06080;partial=true;pseudo=true;start_range=.,1307919 NZ_CP047492.1 Protein Homology CDS 1307919 1309076 . + 0 ID=cds-IXO1104_RS06135;Parent=gene-IXO1104_RS06135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851068.1;locus_tag=IXO1104_RS06135;partial=true;product=flavin monoamine oxidase family protein;pseudo=true;start_range=.,1307919;transl_table=11 NZ_CP047492.1 RefSeq gene 1309073 1309498 . + . ID=gene-IXO1104_RS06140;Name=IXO1104_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06140;old_locus_tag=IXO1104_06085 NZ_CP047492.1 Protein Homology CDS 1309073 1309498 . + 0 ID=cds-WP_011258050.1;Parent=gene-IXO1104_RS06140;Dbxref=Genbank:WP_011258050.1;Name=WP_011258050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504474.1;locus_tag=IXO1104_RS06140;product=cytochrome c;protein_id=WP_011258050.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1309523 1310026 . + . ID=gene-IXO1104_RS06145;Name=IXO1104_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06145;old_locus_tag=IXO1104_06090 NZ_CP047492.1 Protein Homology CDS 1309523 1310026 . + 0 ID=cds-WP_011407846.1;Parent=gene-IXO1104_RS06145;Dbxref=Genbank:WP_011407846.1;Name=WP_011407846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348483.1;locus_tag=IXO1104_RS06145;product=RidA family protein;protein_id=WP_011407846.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1310057 1311257 . + . ID=gene-IXO1104_RS06150;Name=IXO1104_RS06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06150;old_locus_tag=IXO1104_06095;pseudo=true NZ_CP047492.1 Protein Homology CDS 1310057 1311257 . + 0 ID=cds-IXO1104_RS06150;Parent=gene-IXO1104_RS06150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926874.1;locus_tag=IXO1104_RS06150;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1311469 1311918 . + . ID=gene-IXO1104_RS06155;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=IXO1104_RS06155;old_locus_tag=IXO1104_06100 NZ_CP047492.1 Protein Homology CDS 1311469 1311918 . + 0 ID=cds-WP_011407850.1;Parent=gene-IXO1104_RS06155;Dbxref=Genbank:WP_011407850.1;Name=WP_011407850.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851071.1;locus_tag=IXO1104_RS06155;product=azurin;protein_id=WP_011407850.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1311997 1314781 . - . ID=gene-IXO1104_RS06160;Name=IXO1104_RS06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06160;old_locus_tag=IXO1104_06105;pseudo=true NZ_CP047492.1 Protein Homology CDS 1311997 1314781 . - 0 ID=cds-IXO1104_RS06160;Parent=gene-IXO1104_RS06160;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851072.1;locus_tag=IXO1104_RS06160;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1315172 1316140 . - . ID=gene-IXO1104_RS06165;Name=IXO1104_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06165;old_locus_tag=IXO1104_06110 NZ_CP047492.1 Protein Homology CDS 1315172 1316140 . - 0 ID=cds-WP_011258802.1-5;Parent=gene-IXO1104_RS06165;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS06165;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1316469 1317758 . - . ID=gene-IXO1104_RS06170;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=IXO1104_RS06170;old_locus_tag=IXO1104_06115 NZ_CP047492.1 Protein Homology CDS 1316469 1317758 . - 0 ID=cds-WP_027703881.1;Parent=gene-IXO1104_RS06170;Dbxref=Genbank:WP_027703881.1;Name=WP_027703881.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052264.1;locus_tag=IXO1104_RS06170;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_027703881.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1318044 1321223 . + . ID=gene-IXO1104_RS06175;Name=IXO1104_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06175 NZ_CP047492.1 Protein Homology CDS 1318044 1321223 . + 0 ID=cds-WP_027703880.1;Parent=gene-IXO1104_RS06175;Dbxref=Genbank:WP_027703880.1;Name=WP_027703880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169557.1;locus_tag=IXO1104_RS06175;product=TonB-dependent receptor;protein_id=WP_027703880.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1321720 1322577 . - . ID=gene-IXO1104_RS06180;Name=IXO1104_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06180;old_locus_tag=IXO1104_06130 NZ_CP047492.1 Protein Homology CDS 1321720 1322577 . - 0 ID=cds-WP_241846833.1;Parent=gene-IXO1104_RS06180;Dbxref=Genbank:WP_241846833.1;Name=WP_241846833.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258055.1;locus_tag=IXO1104_RS06180;product=IS30 family transposase;protein_id=WP_241846833.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1322671 1323579 . - . ID=gene-IXO1104_RS06185;Name=IXO1104_RS06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06185;old_locus_tag=IXO1104_06135;partial=true;pseudo=true;start_range=.,1322671 NZ_CP047492.1 Protein Homology CDS 1322671 1323579 . - 0 ID=cds-IXO1104_RS06185;Parent=gene-IXO1104_RS06185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=IXO1104_RS06185;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1322671;transl_table=11 NZ_CP047492.1 RefSeq gene 1323674 1327801 . - . ID=gene-IXO1104_RS06190;Name=IXO1104_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06190;old_locus_tag=IXO1104_06145 NZ_CP047492.1 Protein Homology CDS 1323674 1327801 . - 0 ID=cds-WP_164994109.1;Parent=gene-IXO1104_RS06190;Dbxref=Genbank:WP_164994109.1;Name=WP_164994109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS06190;product=avirulence protein;protein_id=WP_164994109.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1328025 1328324 . - . ID=gene-IXO1104_RS06195;Name=IXO1104_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06195;old_locus_tag=IXO1104_06150 NZ_CP047492.1 Protein Homology CDS 1328025 1328324 . - 0 ID=cds-WP_011407856.1;Parent=gene-IXO1104_RS06195;Dbxref=Genbank:WP_011407856.1;Name=WP_011407856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS06195;product=hypothetical protein;protein_id=WP_011407856.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1328328 1328522 . - . ID=gene-IXO1104_RS06200;Name=IXO1104_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06200;old_locus_tag=IXO1104_06155 NZ_CP047492.1 GeneMarkS-2+ CDS 1328328 1328522 . - 0 ID=cds-WP_041182100.1;Parent=gene-IXO1104_RS06200;Dbxref=Genbank:WP_041182100.1;Name=WP_041182100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06200;product=hypothetical protein;protein_id=WP_041182100.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1328791 1331799 . - . ID=gene-IXO1104_RS06205;Name=IXO1104_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06205;old_locus_tag=IXO1104_06160 NZ_CP047492.1 Protein Homology CDS 1328791 1331799 . - 0 ID=cds-WP_263117855.1;Parent=gene-IXO1104_RS06205;Dbxref=Genbank:WP_263117855.1;Name=WP_263117855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS06205;product=avirulence protein;protein_id=WP_263117855.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1332023 1332322 . - . ID=gene-IXO1104_RS06210;Name=IXO1104_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06210;old_locus_tag=IXO1104_06165 NZ_CP047492.1 Protein Homology CDS 1332023 1332322 . - 0 ID=cds-WP_041182761.1;Parent=gene-IXO1104_RS06210;Dbxref=Genbank:WP_041182761.1;Name=WP_041182761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS06210;product=hypothetical protein;protein_id=WP_041182761.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1332326 1332520 . - . ID=gene-IXO1104_RS06215;Name=IXO1104_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06215;old_locus_tag=IXO1104_06170 NZ_CP047492.1 GeneMarkS-2+ CDS 1332326 1332520 . - 0 ID=cds-WP_133265475.1;Parent=gene-IXO1104_RS06215;Dbxref=Genbank:WP_133265475.1;Name=WP_133265475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06215;product=hypothetical protein;protein_id=WP_133265475.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1332789 1336199 . - . ID=gene-IXO1104_RS06220;Name=IXO1104_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06220;old_locus_tag=IXO1104_06175 NZ_CP047492.1 Protein Homology CDS 1332789 1336199 . - 0 ID=cds-WP_206737945.1;Parent=gene-IXO1104_RS06220;Dbxref=Genbank:WP_206737945.1;Name=WP_206737945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS06220;product=Avirulence protein AvrBs3;protein_id=WP_206737945.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1336424 1336723 . - . ID=gene-IXO1104_RS06225;Name=IXO1104_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06225;old_locus_tag=IXO1104_06180 NZ_CP047492.1 Protein Homology CDS 1336424 1336723 . - 0 ID=cds-WP_011408491.1;Parent=gene-IXO1104_RS06225;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS06225;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1336727 1336921 . - . ID=gene-IXO1104_RS06230;Name=IXO1104_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06230;old_locus_tag=IXO1104_06185 NZ_CP047492.1 GeneMarkS-2+ CDS 1336727 1336921 . - 0 ID=cds-WP_164994110.1;Parent=gene-IXO1104_RS06230;Dbxref=Genbank:WP_164994110.1;Name=WP_164994110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06230;product=hypothetical protein;protein_id=WP_164994110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1337189 1341640 . - . ID=gene-IXO1104_RS06235;Name=IXO1104_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06235;old_locus_tag=IXO1104_06190 NZ_CP047492.1 Protein Homology CDS 1337189 1341640 . - 0 ID=cds-WP_263117857.1;Parent=gene-IXO1104_RS06235;Dbxref=Genbank:WP_263117857.1;Name=WP_263117857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445810.1;locus_tag=IXO1104_RS06235;product=avirulence protein;protein_id=WP_263117857.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1341864 1342163 . - . ID=gene-IXO1104_RS06240;Name=IXO1104_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06240;old_locus_tag=IXO1104_06195 NZ_CP047492.1 Protein Homology CDS 1341864 1342163 . - 0 ID=cds-WP_011407856.1-2;Parent=gene-IXO1104_RS06240;Dbxref=Genbank:WP_011407856.1;Name=WP_011407856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS06240;product=hypothetical protein;protein_id=WP_011407856.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1342167 1342361 . - . ID=gene-IXO1104_RS06245;Name=IXO1104_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06245;old_locus_tag=IXO1104_06200 NZ_CP047492.1 GeneMarkS-2+ CDS 1342167 1342361 . - 0 ID=cds-WP_012445814.1;Parent=gene-IXO1104_RS06245;Dbxref=Genbank:WP_012445814.1;Name=WP_012445814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06245;product=hypothetical protein;protein_id=WP_012445814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1342630 1346343 . - . ID=gene-IXO1104_RS06250;Name=IXO1104_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06250;old_locus_tag=IXO1104_06210 NZ_CP047492.1 Protein Homology CDS 1342630 1346343 . - 0 ID=cds-WP_164994111.1;Parent=gene-IXO1104_RS06250;Dbxref=Genbank:WP_164994111.1;Name=WP_164994111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS06250;product=avirulence protein;protein_id=WP_164994111.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1346475 1347125 . + . ID=gene-IXO1104_RS06255;Name=IXO1104_RS06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06255;old_locus_tag=IXO1104_06215;partial=true;pseudo=true;start_range=.,1346475 NZ_CP047492.1 Protein Homology CDS 1346475 1347125 . + 0 ID=cds-IXO1104_RS06255;Parent=gene-IXO1104_RS06255;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS06255;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1346475;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1347134 1347460 . + . ID=gene-IXO1104_RS06260;Name=IXO1104_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06260;old_locus_tag=IXO1104_06220;partial=true;pseudo=true;start_range=.,1347134 NZ_CP047492.1 Protein Homology CDS 1347134 1347460 . + 0 ID=cds-IXO1104_RS06260;Parent=gene-IXO1104_RS06260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1104_RS06260;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1347134;transl_table=11 NZ_CP047492.1 RefSeq gene 1347518 1347751 . - . ID=gene-IXO1104_RS06265;Name=IXO1104_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06265 NZ_CP047492.1 GeneMarkS-2+ CDS 1347518 1347751 . - 0 ID=cds-WP_041182004.1;Parent=gene-IXO1104_RS06265;Dbxref=Genbank:WP_041182004.1;Name=WP_041182004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06265;product=hypothetical protein;protein_id=WP_041182004.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1347815 1348879 . - . ID=gene-IXO1104_RS06270;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=IXO1104_RS06270;old_locus_tag=IXO1104_06225 NZ_CP047492.1 Protein Homology CDS 1347815 1348879 . - 0 ID=cds-WP_011258066.1;Parent=gene-IXO1104_RS06270;Dbxref=Genbank:WP_011258066.1;Name=WP_011258066.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407863.1;locus_tag=IXO1104_RS06270;product=uroporphyrinogen decarboxylase;protein_id=WP_011258066.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1348894 1349145 . - . ID=gene-IXO1104_RS06275;Name=IXO1104_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06275;old_locus_tag=IXO1104_06230 NZ_CP047492.1 Protein Homology CDS 1348894 1349145 . - 0 ID=cds-WP_011407864.1;Parent=gene-IXO1104_RS06275;Dbxref=Genbank:WP_011407864.1;Name=WP_011407864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407864.1;locus_tag=IXO1104_RS06275;product=WGR domain-containing protein;protein_id=WP_011407864.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1349447 1350559 . - . ID=gene-IXO1104_RS06280;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=IXO1104_RS06280;old_locus_tag=IXO1104_06235 NZ_CP047492.1 Protein Homology CDS 1349447 1350559 . - 0 ID=cds-WP_011258068.1;Parent=gene-IXO1104_RS06280;Dbxref=Genbank:WP_011258068.1;Name=WP_011258068.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090724.1;locus_tag=IXO1104_RS06280;product=3-dehydroquinate synthase;protein_id=WP_011258068.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1350556 1351098 . - . ID=gene-IXO1104_RS06285;Name=IXO1104_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06285;old_locus_tag=IXO1104_06240 NZ_CP047492.1 Protein Homology CDS 1350556 1351098 . - 0 ID=cds-WP_011258069.1;Parent=gene-IXO1104_RS06285;Dbxref=Genbank:WP_011258069.1;Name=WP_011258069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917545.1;locus_tag=IXO1104_RS06285;product=shikimate kinase;protein_id=WP_011258069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1351265 1351864 . + . ID=gene-IXO1104_RS06290;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=IXO1104_RS06290;old_locus_tag=IXO1104_06245 NZ_CP047492.1 Protein Homology CDS 1351265 1351864 . + 0 ID=cds-WP_011258070.1;Parent=gene-IXO1104_RS06290;Dbxref=Genbank:WP_011258070.1;Name=WP_011258070.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381128.1;locus_tag=IXO1104_RS06290;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_011258070.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1351979 1352461 . + . ID=gene-IXO1104_RS06295;Name=IXO1104_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06295;old_locus_tag=IXO1104_06250 NZ_CP047492.1 Protein Homology CDS 1351979 1352461 . + 0 ID=cds-WP_011407866.1;Parent=gene-IXO1104_RS06295;Dbxref=Genbank:WP_011407866.1;Name=WP_011407866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157839.1;locus_tag=IXO1104_RS06295;product=YjfI family protein;protein_id=WP_011407866.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1352474 1353247 . + . ID=gene-IXO1104_RS06300;Name=IXO1104_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06300;old_locus_tag=IXO1104_06255 NZ_CP047492.1 Protein Homology CDS 1352474 1353247 . + 0 ID=cds-WP_011258072.1;Parent=gene-IXO1104_RS06300;Dbxref=Genbank:WP_011258072.1;Name=WP_011258072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302374.1;locus_tag=IXO1104_RS06300;product=PspA/IM30 family protein;protein_id=WP_011258072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1353273 1354355 . + . ID=gene-IXO1104_RS06305;Name=IXO1104_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06305;old_locus_tag=IXO1104_06260 NZ_CP047492.1 Protein Homology CDS 1353273 1354355 . + 0 ID=cds-WP_027703610.1;Parent=gene-IXO1104_RS06305;Dbxref=Genbank:WP_027703610.1;Name=WP_027703610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971371.1;locus_tag=IXO1104_RS06305;product=ion channel;protein_id=WP_027703610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1354352 1355029 . + . ID=gene-IXO1104_RS06310;Name=IXO1104_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06310;old_locus_tag=IXO1104_06265 NZ_CP047492.1 Protein Homology CDS 1354352 1355029 . + 0 ID=cds-WP_027703609.1;Parent=gene-IXO1104_RS06310;Dbxref=Genbank:WP_027703609.1;Name=WP_027703609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237428.1;locus_tag=IXO1104_RS06310;product=YjfK family protein;protein_id=WP_027703609.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1355067 1355471 . + . ID=gene-IXO1104_RS06315;Name=IXO1104_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06315;old_locus_tag=IXO1104_06270 NZ_CP047492.1 Protein Homology CDS 1355067 1355471 . + 0 ID=cds-WP_011407869.1;Parent=gene-IXO1104_RS06315;Dbxref=Genbank:WP_011407869.1;Name=WP_011407869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807970.1;locus_tag=IXO1104_RS06315;product=DUF350 domain-containing protein;protein_id=WP_011407869.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1355484 1356056 . + . ID=gene-IXO1104_RS06320;Name=IXO1104_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06320;old_locus_tag=IXO1104_06275 NZ_CP047492.1 Protein Homology CDS 1355484 1356056 . + 0 ID=cds-WP_011407870.1;Parent=gene-IXO1104_RS06320;Dbxref=Genbank:WP_011407870.1;Name=WP_011407870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407870.1;locus_tag=IXO1104_RS06320;product=DUF1190 domain-containing protein;protein_id=WP_011407870.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1356058 1357224 . + . ID=gene-IXO1104_RS06325;Name=IXO1104_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06325;old_locus_tag=IXO1104_06280 NZ_CP047492.1 Protein Homology CDS 1356058 1357224 . + 0 ID=cds-WP_011258077.1;Parent=gene-IXO1104_RS06325;Dbxref=Genbank:WP_011258077.1;Name=WP_011258077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171699.1;locus_tag=IXO1104_RS06325;product=glutathionylspermidine synthase family protein;protein_id=WP_011258077.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1357691 1358953 . - . ID=gene-IXO1104_RS06330;Name=IXO1104_RS06330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06330;old_locus_tag=IXO1104_06290;pseudo=true NZ_CP047492.1 Protein Homology CDS 1357691 1358953 . - 0 ID=cds-IXO1104_RS06330;Parent=gene-IXO1104_RS06330;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269592.1;locus_tag=IXO1104_RS06330;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1358868 1359188 . + . ID=gene-IXO1104_RS06335;Name=IXO1104_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06335 NZ_CP047492.1 GeneMarkS-2+ CDS 1358868 1359188 . + 0 ID=cds-WP_027703607.1;Parent=gene-IXO1104_RS06335;Dbxref=Genbank:WP_027703607.1;Name=WP_027703607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06335;product=hypothetical protein;protein_id=WP_027703607.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1359204 1359650 . + . ID=gene-IXO1104_RS06340;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=IXO1104_RS06340;old_locus_tag=IXO1104_06295 NZ_CP047492.1 Protein Homology CDS 1359204 1359650 . + 0 ID=cds-WP_011258079.1;Parent=gene-IXO1104_RS06340;Dbxref=Genbank:WP_011258079.1;Name=WP_011258079.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965644.1;locus_tag=IXO1104_RS06340;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_011258079.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1359870 1361876 . + . ID=gene-IXO1104_RS06345;Name=IXO1104_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06345;old_locus_tag=IXO1104_06300 NZ_CP047492.1 Protein Homology CDS 1359870 1361876 . + 0 ID=cds-WP_011407873.1;Parent=gene-IXO1104_RS06345;Dbxref=Genbank:WP_011407873.1;Name=WP_011407873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851403.1;locus_tag=IXO1104_RS06345;product=M1 family metallopeptidase;protein_id=WP_011407873.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1362923 1366081 . + . ID=gene-IXO1104_RS06350;Name=IXO1104_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06350;old_locus_tag=IXO1104_06305 NZ_CP047492.1 Protein Homology CDS 1362923 1366081 . + 0 ID=cds-WP_027703605.1;Parent=gene-IXO1104_RS06350;Dbxref=Genbank:WP_027703605.1;Name=WP_027703605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489548.1;locus_tag=IXO1104_RS06350;product=TonB-dependent receptor;protein_id=WP_027703605.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1366413 1367165 . + . ID=gene-IXO1104_RS06355;Name=IXO1104_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06355;old_locus_tag=IXO1104_06310 NZ_CP047492.1 Protein Homology CDS 1366413 1367165 . + 0 ID=cds-WP_027703604.1;Parent=gene-IXO1104_RS06355;Dbxref=Genbank:WP_027703604.1;Name=WP_027703604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381156.1;locus_tag=IXO1104_RS06355;product=SapC family protein;protein_id=WP_027703604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1367176 1368222 . + . ID=gene-IXO1104_RS06360;Name=IXO1104_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06360;old_locus_tag=IXO1104_06315 NZ_CP047492.1 Protein Homology CDS 1367176 1368222 . + 0 ID=cds-WP_012445799.1;Parent=gene-IXO1104_RS06360;Dbxref=Genbank:WP_012445799.1;Name=WP_012445799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445799.1;locus_tag=IXO1104_RS06360;product=cupin-like domain-containing protein;protein_id=WP_012445799.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1368263 1369780 . + . ID=gene-IXO1104_RS06365;Name=IXO1104_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06365;old_locus_tag=IXO1104_06320 NZ_CP047492.1 Protein Homology CDS 1368263 1369780 . + 0 ID=cds-WP_011258084.1;Parent=gene-IXO1104_RS06365;Dbxref=Genbank:WP_011258084.1;Name=WP_011258084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173993.1;locus_tag=IXO1104_RS06365;product=tryptophan 7-halogenase;protein_id=WP_011258084.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1369818 1370822 . - . ID=gene-IXO1104_RS06370;Name=IXO1104_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06370;old_locus_tag=IXO1104_06325 NZ_CP047492.1 Protein Homology CDS 1369818 1370822 . - 0 ID=cds-WP_011258085.1;Parent=gene-IXO1104_RS06370;Dbxref=Genbank:WP_011258085.1;Name=WP_011258085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116322.1;locus_tag=IXO1104_RS06370;product=MBL fold metallo-hydrolase;protein_id=WP_011258085.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1370967 1371365 . - . ID=gene-IXO1104_RS06375;Name=IXO1104_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06375;old_locus_tag=IXO1104_06330 NZ_CP047492.1 Protein Homology CDS 1370967 1371365 . - 0 ID=cds-WP_012445797.1;Parent=gene-IXO1104_RS06375;Dbxref=Genbank:WP_012445797.1;Name=WP_012445797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165040.1;locus_tag=IXO1104_RS06375;product=hypothetical protein;protein_id=WP_012445797.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1371928 1373325 . - . ID=gene-IXO1104_RS06380;Name=IXO1104_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06380;old_locus_tag=IXO1104_06335 NZ_CP047492.1 Protein Homology CDS 1371928 1373325 . - 0 ID=cds-WP_011258087.1;Parent=gene-IXO1104_RS06380;Dbxref=Genbank:WP_011258087.1;Name=WP_011258087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489555.1;locus_tag=IXO1104_RS06380;product=trypsin-like peptidase domain-containing protein;protein_id=WP_011258087.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1373765 1375147 . - . ID=gene-IXO1104_RS06385;Name=IXO1104_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06385;old_locus_tag=IXO1104_06340 NZ_CP047492.1 Protein Homology CDS 1373765 1375147 . - 0 ID=cds-WP_011407881.1;Parent=gene-IXO1104_RS06385;Dbxref=Genbank:WP_011407881.1;Name=WP_011407881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157822.1;locus_tag=IXO1104_RS06385;product=APC family permease;protein_id=WP_011407881.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1375340 1376104 . + . ID=gene-IXO1104_RS06390;Name=IXO1104_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06390;old_locus_tag=IXO1104_06345 NZ_CP047492.1 Protein Homology CDS 1375340 1376104 . + 0 ID=cds-WP_011407882.1;Parent=gene-IXO1104_RS06390;Dbxref=Genbank:WP_011407882.1;Name=WP_011407882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964311.1;locus_tag=IXO1104_RS06390;product=LuxR family transcriptional regulator;protein_id=WP_011407882.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1376418 1377359 . + . ID=gene-IXO1104_RS06395;Name=IXO1104_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06395;old_locus_tag=IXO1104_06350 NZ_CP047492.1 Protein Homology CDS 1376418 1377359 . + 0 ID=cds-WP_011258090.1;Parent=gene-IXO1104_RS06395;Dbxref=Genbank:WP_011258090.1;Name=WP_011258090.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437774.1;locus_tag=IXO1104_RS06395;product=proline iminopeptidase-family hydrolase;protein_id=WP_011258090.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1377944 1378019 . + . ID=gene-IXO1104_RS06400;Name=IXO1104_RS06400;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06400;old_locus_tag=IXO1104_06355 NZ_CP047492.1 cmsearch ncRNA 1377944 1378019 . + . ID=rna-IXO1104_RS06400;Parent=gene-IXO1104_RS06400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06400;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1377944 1378019 . + . ID=exon-IXO1104_RS06400-1;Parent=rna-IXO1104_RS06400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06400;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1378115 1379503 . + . ID=gene-IXO1104_RS06405;Name=IXO1104_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06405;old_locus_tag=IXO1104_06360 NZ_CP047492.1 Protein Homology CDS 1378115 1379503 . + 0 ID=cds-WP_011258091.1;Parent=gene-IXO1104_RS06405;Dbxref=Genbank:WP_011258091.1;Name=WP_011258091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003491164.1;locus_tag=IXO1104_RS06405;product=amino acid permease;protein_id=WP_011258091.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1379785 1379910 . + . ID=gene-IXO1104_RS06410;Name=IXO1104_RS06410;end_range=1379910,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06410;old_locus_tag=IXO1104_06365;partial=true;pseudo=true;start_range=.,1379785 NZ_CP047492.1 Protein Homology CDS 1379785 1379910 . + 0 ID=cds-IXO1104_RS06410;Parent=gene-IXO1104_RS06410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1379910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158987.1;locus_tag=IXO1104_RS06410;partial=true;product=peptidase;pseudo=true;start_range=.,1379785;transl_table=11 NZ_CP047492.1 RefSeq gene 1379925 1381160 . - . ID=gene-IXO1104_RS06415;Name=IXO1104_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06415;old_locus_tag=IXO1104_06370 NZ_CP047492.1 Protein Homology CDS 1379925 1381160 . - 0 ID=cds-WP_012445794.1-2;Parent=gene-IXO1104_RS06415;Dbxref=Genbank:WP_012445794.1;Name=WP_012445794.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS06415;product=ISL3 family transposase;protein_id=WP_012445794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1381547 1382947 . + . ID=gene-IXO1104_RS06420;Name=IXO1104_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06420;old_locus_tag=IXO1104_06380 NZ_CP047492.1 Protein Homology CDS 1381547 1382947 . + 0 ID=cds-WP_011258093.1;Parent=gene-IXO1104_RS06420;Dbxref=Genbank:WP_011258093.1;Name=WP_011258093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237439.1;locus_tag=IXO1104_RS06420;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011258093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1382947 1383963 . + . ID=gene-IXO1104_RS06425;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IXO1104_RS06425;old_locus_tag=IXO1104_06385 NZ_CP047492.1 Protein Homology CDS 1382947 1383963 . + 0 ID=cds-WP_069960074.1;Parent=gene-IXO1104_RS06425;Dbxref=Genbank:WP_069960074.1;Name=WP_069960074.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051953.1;locus_tag=IXO1104_RS06425;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_069960074.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1384024 1384761 . - . ID=gene-IXO1104_RS06430;Name=IXO1104_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06430;old_locus_tag=IXO1104_06390 NZ_CP047492.1 Protein Homology CDS 1384024 1384761 . - 0 ID=cds-WP_012445791.1;Parent=gene-IXO1104_RS06430;Dbxref=Genbank:WP_012445791.1;Name=WP_012445791.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302425.1;locus_tag=IXO1104_RS06430;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_012445791.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1384972 1386333 . - . ID=gene-IXO1104_RS06435;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=IXO1104_RS06435;old_locus_tag=IXO1104_06395 NZ_CP047492.1 Protein Homology CDS 1384972 1386333 . - 0 ID=cds-WP_011258096.1;Parent=gene-IXO1104_RS06435;Dbxref=Genbank:WP_011258096.1;Name=WP_011258096.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502484.1;locus_tag=IXO1104_RS06435;product=magnesium transporter;protein_id=WP_011258096.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1386621 1388351 . - . ID=gene-IXO1104_RS06440;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=IXO1104_RS06440;old_locus_tag=IXO1104_06400 NZ_CP047492.1 Protein Homology CDS 1386621 1388351 . - 0 ID=cds-WP_011407884.1;Parent=gene-IXO1104_RS06440;Dbxref=Genbank:WP_011407884.1;Name=WP_011407884.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154796.1;locus_tag=IXO1104_RS06440;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_011407884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1388410 1388679 . - . ID=gene-IXO1104_RS06445;Name=IXO1104_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06445;old_locus_tag=IXO1104_06405 NZ_CP047492.1 Protein Homology CDS 1388410 1388679 . - 0 ID=cds-WP_005913389.1;Parent=gene-IXO1104_RS06445;Dbxref=Genbank:WP_005913389.1;Name=WP_005913389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237443.1;locus_tag=IXO1104_RS06445;product=HPr family phosphocarrier protein;protein_id=WP_005913389.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1388672 1389064 . - . ID=gene-IXO1104_RS06450;Name=IXO1104_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06450;old_locus_tag=IXO1104_06410 NZ_CP047492.1 Protein Homology CDS 1388672 1389064 . - 0 ID=cds-WP_011258098.1;Parent=gene-IXO1104_RS06450;Dbxref=Genbank:WP_011258098.1;Name=WP_011258098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=IXO1104_RS06450;product=hypothetical protein;protein_id=WP_011258098.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1389592 1390464 . - . ID=gene-IXO1104_RS06455;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS06455;old_locus_tag=IXO1104_06415 NZ_CP047492.1 Protein Homology CDS 1389592 1390464 . - 0 ID=cds-WP_011258099.1;Parent=gene-IXO1104_RS06455;Dbxref=Genbank:WP_011258099.1;Name=WP_011258099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993216.1;locus_tag=IXO1104_RS06455;product=RNase adapter RapZ;protein_id=WP_011258099.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1390461 1391411 . - . ID=gene-IXO1104_RS06460;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=IXO1104_RS06460;old_locus_tag=IXO1104_06420 NZ_CP047492.1 Protein Homology CDS 1390461 1391411 . - 0 ID=cds-WP_011258100.1;Parent=gene-IXO1104_RS06460;Dbxref=Genbank:WP_011258100.1;Name=WP_011258100.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425835.1;locus_tag=IXO1104_RS06460;product=HPr(Ser) kinase/phosphatase;protein_id=WP_011258100.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1391408 1391866 . - . ID=gene-IXO1104_RS06465;Name=IXO1104_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06465;old_locus_tag=IXO1104_06425 NZ_CP047492.1 Protein Homology CDS 1391408 1391866 . - 0 ID=cds-WP_011407887.1;Parent=gene-IXO1104_RS06465;Dbxref=Genbank:WP_011407887.1;Name=WP_011407887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944116.1;locus_tag=IXO1104_RS06465;product=PTS sugar transporter subunit IIA;protein_id=WP_011407887.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1391888 1392205 . - . ID=gene-IXO1104_RS06470;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=IXO1104_RS06470;old_locus_tag=IXO1104_06430 NZ_CP047492.1 Protein Homology CDS 1391888 1392205 . - 0 ID=cds-WP_011258102.1;Parent=gene-IXO1104_RS06470;Dbxref=Genbank:WP_011258102.1;Name=WP_011258102.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913379.1;locus_tag=IXO1104_RS06470;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_011258102.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1392293 1393690 . - . ID=gene-IXO1104_RS06475;Name=IXO1104_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06475;old_locus_tag=IXO1104_06435 NZ_CP047492.1 Protein Homology CDS 1392293 1393690 . - 0 ID=cds-WP_012445785.1;Parent=gene-IXO1104_RS06475;Dbxref=Genbank:WP_012445785.1;Name=WP_012445785.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161722.1;locus_tag=IXO1104_RS06475;product=RNA polymerase factor sigma-54;protein_id=WP_012445785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1393773 1394492 . - . ID=gene-IXO1104_RS06480;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=IXO1104_RS06480;old_locus_tag=IXO1104_06440 NZ_CP047492.1 Protein Homology CDS 1393773 1394492 . - 0 ID=cds-WP_011258104.1;Parent=gene-IXO1104_RS06480;Dbxref=Genbank:WP_011258104.1;Name=WP_011258104.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913374.1;locus_tag=IXO1104_RS06480;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_011258104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1394492 1395040 . - . ID=gene-IXO1104_RS06485;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=IXO1104_RS06485;old_locus_tag=IXO1104_06445 NZ_CP047492.1 Protein Homology CDS 1394492 1395040 . - 0 ID=cds-WP_011258105.1;Parent=gene-IXO1104_RS06485;Dbxref=Genbank:WP_011258105.1;Name=WP_011258105.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090696.1;locus_tag=IXO1104_RS06485;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_011258105.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1395018 1395593 . - . ID=gene-IXO1104_RS06490;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=IXO1104_RS06490;old_locus_tag=IXO1104_06450 NZ_CP047492.1 Protein Homology CDS 1395018 1395593 . - 0 ID=cds-WP_011258106.1;Parent=gene-IXO1104_RS06490;Dbxref=Genbank:WP_011258106.1;Name=WP_011258106.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301638.1;locus_tag=IXO1104_RS06490;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011258106.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1395590 1396138 . - . ID=gene-IXO1104_RS06495;Name=IXO1104_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06495;old_locus_tag=IXO1104_06455 NZ_CP047492.1 Protein Homology CDS 1395590 1396138 . - 0 ID=cds-WP_011407889.1;Parent=gene-IXO1104_RS06495;Dbxref=Genbank:WP_011407889.1;Name=WP_011407889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407889.1;locus_tag=IXO1104_RS06495;product=HAD hydrolase family protein;protein_id=WP_011407889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1396187 1397188 . - . ID=gene-IXO1104_RS06500;Name=IXO1104_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06500;old_locus_tag=IXO1104_06460 NZ_CP047492.1 Protein Homology CDS 1396187 1397188 . - 0 ID=cds-WP_012445783.1;Parent=gene-IXO1104_RS06500;Dbxref=Genbank:WP_012445783.1;Name=WP_012445783.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993233.1;locus_tag=IXO1104_RS06500;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_012445783.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1397243 1397470 . + . ID=gene-IXO1104_RS06505;Name=IXO1104_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06505;old_locus_tag=IXO1104_06465 NZ_CP047492.1 Protein Homology CDS 1397243 1397470 . + 0 ID=cds-WP_019301635.1;Parent=gene-IXO1104_RS06505;Dbxref=Genbank:WP_019301635.1;Name=WP_019301635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905061.1;locus_tag=IXO1104_RS06505;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_019301635.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1397709 1398983 . + . ID=gene-IXO1104_RS06510;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=IXO1104_RS06510;old_locus_tag=IXO1104_06470 NZ_CP047492.1 Protein Homology CDS 1397709 1398983 . + 0 ID=cds-WP_011258110.1;Parent=gene-IXO1104_RS06510;Dbxref=Genbank:WP_011258110.1;Name=WP_011258110.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437778.1;locus_tag=IXO1104_RS06510;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_011258110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1398980 1399303 . + . ID=gene-IXO1104_RS06515;Name=IXO1104_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06515;old_locus_tag=IXO1104_06475 NZ_CP047492.1 Protein Homology CDS 1398980 1399303 . + 0 ID=cds-WP_011258111.1;Parent=gene-IXO1104_RS06515;Dbxref=Genbank:WP_011258111.1;Name=WP_011258111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348142.1;locus_tag=IXO1104_RS06515;product=hypothetical protein;protein_id=WP_011258111.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1400392 1401075 . - . ID=gene-IXO1104_RS06520;Name=IXO1104_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06520;old_locus_tag=IXO1104_06480 NZ_CP047492.1 Protein Homology CDS 1400392 1401075 . - 0 ID=cds-WP_011258112.1;Parent=gene-IXO1104_RS06520;Dbxref=Genbank:WP_011258112.1;Name=WP_011258112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168434.1;locus_tag=IXO1104_RS06520;product=DUF3108 domain-containing protein;protein_id=WP_011258112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1401079 1401906 . - . ID=gene-IXO1104_RS06525;Name=IXO1104_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06525;old_locus_tag=IXO1104_06485 NZ_CP047492.1 Protein Homology CDS 1401079 1401906 . - 0 ID=cds-WP_011258113.1;Parent=gene-IXO1104_RS06525;Dbxref=Genbank:WP_011258113.1;Name=WP_011258113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158355.1;locus_tag=IXO1104_RS06525;product=DUF3108 domain-containing protein;protein_id=WP_011258113.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1401972 1402640 . - . ID=gene-IXO1104_RS06530;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=IXO1104_RS06530;old_locus_tag=IXO1104_06490 NZ_CP047492.1 Protein Homology CDS 1401972 1402640 . - 0 ID=cds-WP_011258114.1;Parent=gene-IXO1104_RS06530;Dbxref=Genbank:WP_011258114.1;Name=WP_011258114.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258114.1;locus_tag=IXO1104_RS06530;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_011258114.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1402627 1403244 . - . ID=gene-IXO1104_RS06535;Name=IXO1104_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06535;old_locus_tag=IXO1104_06495 NZ_CP047492.1 Protein Homology CDS 1402627 1403244 . - 0 ID=cds-WP_011258115.1;Parent=gene-IXO1104_RS06535;Dbxref=Genbank:WP_011258115.1;Name=WP_011258115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157703.1;locus_tag=IXO1104_RS06535;product=DUF2238 domain-containing protein;protein_id=WP_011258115.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1403267 1403728 . - . ID=gene-IXO1104_RS06540;Name=IXO1104_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06540;old_locus_tag=IXO1104_06500 NZ_CP047492.1 Protein Homology CDS 1403267 1403728 . - 0 ID=cds-WP_011258116.1;Parent=gene-IXO1104_RS06540;Dbxref=Genbank:WP_011258116.1;Name=WP_011258116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258116.1;locus_tag=IXO1104_RS06540;product=hypothetical protein;protein_id=WP_011258116.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1403742 1404875 . - . ID=gene-IXO1104_RS06545;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=IXO1104_RS06545;old_locus_tag=IXO1104_06505 NZ_CP047492.1 Protein Homology CDS 1403742 1404875 . - 0 ID=cds-WP_027703632.1;Parent=gene-IXO1104_RS06545;Dbxref=Genbank:WP_027703632.1;Name=WP_027703632.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850074.1;locus_tag=IXO1104_RS06545;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_027703632.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1404898 1406010 . + . ID=gene-IXO1104_RS06550;Name=IXO1104_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06550;old_locus_tag=IXO1104_06510 NZ_CP047492.1 Protein Homology CDS 1404898 1406010 . + 0 ID=cds-WP_011407894.1;Parent=gene-IXO1104_RS06550;Dbxref=Genbank:WP_011407894.1;Name=WP_011407894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970596.1;locus_tag=IXO1104_RS06550;product=DUF2066 domain-containing protein;protein_id=WP_011407894.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1406007 1407173 . + . ID=gene-IXO1104_RS06555;Name=IXO1104_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06555;old_locus_tag=IXO1104_06515 NZ_CP047492.1 Protein Homology CDS 1406007 1407173 . + 0 ID=cds-WP_075240475.1;Parent=gene-IXO1104_RS06555;Dbxref=Genbank:WP_075240475.1;Name=WP_075240475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157699.1;locus_tag=IXO1104_RS06555;product=AI-2E family transporter;protein_id=WP_075240475.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1407170 1407871 . + . ID=gene-IXO1104_RS06560;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=IXO1104_RS06560;old_locus_tag=IXO1104_06520 NZ_CP047492.1 Protein Homology CDS 1407170 1407871 . + 0 ID=cds-WP_011258120.1;Parent=gene-IXO1104_RS06560;Dbxref=Genbank:WP_011258120.1;Name=WP_011258120.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=IXO1104_RS06560;product=DnaA regulatory inactivator Hda;protein_id=WP_011258120.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1408038 1408748 . - . ID=gene-IXO1104_RS06565;Name=IXO1104_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06565;old_locus_tag=IXO1104_06525 NZ_CP047492.1 Protein Homology CDS 1408038 1408748 . - 0 ID=cds-WP_011258121.1;Parent=gene-IXO1104_RS06565;Dbxref=Genbank:WP_011258121.1;Name=WP_011258121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=IXO1104_RS06565;product=nucleotidyltransferase family protein;protein_id=WP_011258121.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1408745 1409764 . - . ID=gene-IXO1104_RS06570;Name=IXO1104_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06570;old_locus_tag=IXO1104_06530 NZ_CP047492.1 Protein Homology CDS 1408745 1409764 . - 0 ID=cds-WP_011407895.1;Parent=gene-IXO1104_RS06570;Dbxref=Genbank:WP_011407895.1;Name=WP_011407895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116339.1;locus_tag=IXO1104_RS06570;product=phosphotransferase;protein_id=WP_011407895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1409822 1410094 . - . ID=gene-IXO1104_RS06575;Name=IXO1104_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06575;old_locus_tag=IXO1104_06535 NZ_CP047492.1 Protein Homology CDS 1409822 1410094 . - 0 ID=cds-WP_011407896.1;Parent=gene-IXO1104_RS06575;Dbxref=Genbank:WP_011407896.1;Name=WP_011407896.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157695.1;locus_tag=IXO1104_RS06575;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011407896.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1410319 1411377 . + . ID=gene-IXO1104_RS06580;Name=IXO1104_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06580;old_locus_tag=IXO1104_06540 NZ_CP047492.1 Protein Homology CDS 1410319 1411377 . + 0 ID=cds-WP_133264683.1;Parent=gene-IXO1104_RS06580;Dbxref=Genbank:WP_133264683.1;Name=WP_133264683.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS06580;product=IS630 family transposase;protein_id=WP_133264683.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1411697 1413190 . - . ID=gene-IXO1104_RS06585;Name=IXO1104_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06585;old_locus_tag=IXO1104_06545 NZ_CP047492.1 Protein Homology CDS 1411697 1413190 . - 0 ID=cds-WP_011407897.1;Parent=gene-IXO1104_RS06585;Dbxref=Genbank:WP_011407897.1;Name=WP_011407897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051939.1;locus_tag=IXO1104_RS06585;product=M20 family metallopeptidase;protein_id=WP_011407897.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1413315 1413722 . + . ID=gene-IXO1104_RS06590;Name=IXO1104_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06590;old_locus_tag=IXO1104_06550 NZ_CP047492.1 Protein Homology CDS 1413315 1413722 . + 0 ID=cds-WP_011258127.1;Parent=gene-IXO1104_RS06590;Dbxref=Genbank:WP_011258127.1;Name=WP_011258127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157693.1;locus_tag=IXO1104_RS06590;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011258127.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1414054 1415280 . - . ID=gene-IXO1104_RS06595;Name=IXO1104_RS06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06595;old_locus_tag=IXO1104_06555;pseudo=true NZ_CP047492.1 Protein Homology CDS 1414054 1415280 . - 0 ID=cds-IXO1104_RS06595;Parent=gene-IXO1104_RS06595;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=IXO1104_RS06595;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 cmsearch sequence_feature 1414888 1415004 . - . ID=id-IXO1104_RS06595;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06595;pseudo=true NZ_CP047492.1 RefSeq gene 1415500 1415850 . + . ID=gene-IXO1104_RS06600;Name=IXO1104_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06600;old_locus_tag=IXO1104_06560 NZ_CP047492.1 Protein Homology CDS 1415500 1415850 . + 0 ID=cds-WP_164994113.1;Parent=gene-IXO1104_RS06600;Dbxref=Genbank:WP_164994113.1;Name=WP_164994113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017747.2;locus_tag=IXO1104_RS06600;product=HutD family protein;protein_id=WP_164994113.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1415945 1416913 . - . ID=gene-IXO1104_RS06605;Name=IXO1104_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06605;old_locus_tag=IXO1104_06565 NZ_CP047492.1 Protein Homology CDS 1415945 1416913 . - 0 ID=cds-WP_011258802.1-6;Parent=gene-IXO1104_RS06605;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS06605;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1417143 1417502 . + . ID=gene-IXO1104_RS06610;Name=IXO1104_RS06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06610;old_locus_tag=IXO1104_06570;partial=true;pseudo=true;start_range=.,1417143 NZ_CP047492.1 Protein Homology CDS 1417143 1417502 . + 0 ID=cds-IXO1104_RS06610;Parent=gene-IXO1104_RS06610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157692.1;locus_tag=IXO1104_RS06610;partial=true;product=HutD family protein;pseudo=true;start_range=.,1417143;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1417585 1418025 . - . ID=gene-IXO1104_RS06615;Name=IXO1104_RS06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06615;old_locus_tag=IXO1104_06575;partial=true;pseudo=true;start_range=.,1417585 NZ_CP047492.1 Protein Homology CDS 1417585 1418025 . - 0 ID=cds-IXO1104_RS06615;Parent=gene-IXO1104_RS06615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS06615;partial=true;product=transposase;pseudo=true;start_range=.,1417585;transl_table=11 NZ_CP047492.1 RefSeq gene 1418192 1419157 . + . ID=gene-IXO1104_RS06620;Name=IXO1104_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06620;old_locus_tag=IXO1104_06580 NZ_CP047492.1 Protein Homology CDS 1418192 1419157 . + 0 ID=cds-WP_263115614.1;Parent=gene-IXO1104_RS06620;Dbxref=Genbank:WP_263115614.1;Name=WP_263115614.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS06620;product=IS1595-like element ISXo5 family transposase;protein_id=WP_263115614.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1419197 1419325 . - . ID=gene-IXO1104_RS06625;Name=IXO1104_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06625 NZ_CP047492.1 GeneMarkS-2+ CDS 1419197 1419325 . - 0 ID=cds-WP_256364564.1;Parent=gene-IXO1104_RS06625;Dbxref=Genbank:WP_256364564.1;Name=WP_256364564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06625;product=hypothetical protein;protein_id=WP_256364564.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1419318 1419467 . + . ID=gene-IXO1104_RS06630;Name=IXO1104_RS06630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06630;old_locus_tag=IXO1104_06590;partial=true;pseudo=true;start_range=.,1419318 NZ_CP047492.1 Protein Homology CDS 1419318 1419467 . + 0 ID=cds-IXO1104_RS06630;Parent=gene-IXO1104_RS06630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS06630;partial=true;product=transposase;pseudo=true;start_range=.,1419318;transl_table=11 NZ_CP047492.1 RefSeq gene 1419655 1421238 . - . ID=gene-IXO1104_RS06635;Name=IXO1104_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06635;old_locus_tag=IXO1104_06595 NZ_CP047492.1 Protein Homology CDS 1419655 1421238 . - 0 ID=cds-WP_011258133.1;Parent=gene-IXO1104_RS06635;Dbxref=Genbank:WP_011258133.1;Name=WP_011258133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304880.1;locus_tag=IXO1104_RS06635;product=alpha-L-arabinofuranosidase;protein_id=WP_011258133.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1421486 1422535 . + . ID=gene-IXO1104_RS06640;Name=IXO1104_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06640;old_locus_tag=IXO1104_06600 NZ_CP047492.1 Protein Homology CDS 1421486 1422535 . + 0 ID=cds-WP_027704032.1;Parent=gene-IXO1104_RS06640;Dbxref=Genbank:WP_027704032.1;Name=WP_027704032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302956.1;locus_tag=IXO1104_RS06640;product=galactose mutarotase;protein_id=WP_027704032.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1422823 1423614 . - . ID=gene-IXO1104_RS06645;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS06645;old_locus_tag=IXO1104_06605 NZ_CP047492.1 Protein Homology CDS 1422823 1423614 . - 0 ID=cds-WP_011407903.1;Parent=gene-IXO1104_RS06645;Dbxref=Genbank:WP_011407903.1;Name=WP_011407903.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484236.1;locus_tag=IXO1104_RS06645;product=cytochrome c biogenesis protein CcsA;protein_id=WP_011407903.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1423875 1424840 . + . ID=gene-IXO1104_RS06650;Name=IXO1104_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06650;old_locus_tag=IXO1104_06610 NZ_CP047492.1 Protein Homology CDS 1423875 1424840 . + 0 ID=cds-WP_263117861.1;Parent=gene-IXO1104_RS06650;Dbxref=Genbank:WP_263117861.1;Name=WP_263117861.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS06650;product=IS1595-like element ISXo5 family transposase;protein_id=WP_263117861.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1425142 1426518 . + . ID=gene-IXO1104_RS06655;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=IXO1104_RS06655;old_locus_tag=IXO1104_06615 NZ_CP047492.1 Protein Homology CDS 1425142 1426518 . + 0 ID=cds-WP_011407905.1;Parent=gene-IXO1104_RS06655;Dbxref=Genbank:WP_011407905.1;Name=WP_011407905.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407905.1;locus_tag=IXO1104_RS06655;product=signal recognition particle protein;protein_id=WP_011407905.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1427891 1427966 . + . ID=gene-IXO1104_RS06660;Name=IXO1104_RS06660;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06660;old_locus_tag=IXO1104_06625 NZ_CP047492.1 cmsearch ncRNA 1427891 1427966 . + . ID=rna-IXO1104_RS06660;Parent=gene-IXO1104_RS06660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06660;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1427891 1427966 . + . ID=exon-IXO1104_RS06660-1;Parent=rna-IXO1104_RS06660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06660;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1428091 1429161 . + . ID=gene-IXO1104_RS06665;Name=IXO1104_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06665;old_locus_tag=IXO1104_06630 NZ_CP047492.1 Protein Homology CDS 1428091 1429161 . + 0 ID=cds-WP_012445764.1;Parent=gene-IXO1104_RS06665;Dbxref=Genbank:WP_012445764.1;Name=WP_012445764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484227.1;locus_tag=IXO1104_RS06665;product=nitronate monooxygenase;protein_id=WP_012445764.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1429152 1429949 . + . ID=gene-IXO1104_RS06670;Name=IXO1104_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06670;old_locus_tag=IXO1104_06635 NZ_CP047492.1 Protein Homology CDS 1429152 1429949 . + 0 ID=cds-WP_011407908.1;Parent=gene-IXO1104_RS06670;Dbxref=Genbank:WP_011407908.1;Name=WP_011407908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301831.1;locus_tag=IXO1104_RS06670;product=aminotransferase class IV family protein;protein_id=WP_011407908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1430059 1430316 . + . ID=gene-IXO1104_RS06675;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=IXO1104_RS06675;old_locus_tag=IXO1104_06640 NZ_CP047492.1 Protein Homology CDS 1430059 1430316 . + 0 ID=cds-WP_011258141.1;Parent=gene-IXO1104_RS06675;Dbxref=Genbank:WP_011258141.1;Name=WP_011258141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036396.1;locus_tag=IXO1104_RS06675;product=30S ribosomal protein S16;protein_id=WP_011258141.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1430360 1430872 . + . ID=gene-IXO1104_RS06680;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=IXO1104_RS06680;old_locus_tag=IXO1104_06645 NZ_CP047492.1 Protein Homology CDS 1430360 1430872 . + 0 ID=cds-WP_011407909.1;Parent=gene-IXO1104_RS06680;Dbxref=Genbank:WP_011407909.1;Name=WP_011407909.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407909.1;locus_tag=IXO1104_RS06680;product=ribosome maturation factor RimM;protein_id=WP_011407909.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1430945 1431724 . + . ID=gene-IXO1104_RS06685;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=IXO1104_RS06685;old_locus_tag=IXO1104_06650 NZ_CP047492.1 Protein Homology CDS 1430945 1431724 . + 0 ID=cds-WP_011407910.1;Parent=gene-IXO1104_RS06685;Dbxref=Genbank:WP_011407910.1;Name=WP_011407910.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407910.1;locus_tag=IXO1104_RS06685;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011407910.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1431848 1432255 . + . ID=gene-IXO1104_RS06690;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=IXO1104_RS06690;old_locus_tag=IXO1104_06655 NZ_CP047492.1 Protein Homology CDS 1431848 1432255 . + 0 ID=cds-WP_005989873.1;Parent=gene-IXO1104_RS06690;Dbxref=Genbank:WP_005989873.1;Name=WP_005989873.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470862.1;locus_tag=IXO1104_RS06690;product=50S ribosomal protein L19;protein_id=WP_005989873.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1432647 1432723 . - . ID=gene-IXO1104_RS06695;Name=IXO1104_RS06695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06695;old_locus_tag=IXO1104_06660 NZ_CP047492.1 cmsearch ncRNA 1432647 1432723 . - . ID=rna-IXO1104_RS06695;Parent=gene-IXO1104_RS06695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06695;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1432647 1432723 . - . ID=exon-IXO1104_RS06695-1;Parent=rna-IXO1104_RS06695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06695;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1432881 1434371 . - . ID=gene-IXO1104_RS06700;Name=IXO1104_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06700;old_locus_tag=IXO1104_06665 NZ_CP047492.1 Protein Homology CDS 1432881 1434371 . - 0 ID=cds-WP_011407911.1;Parent=gene-IXO1104_RS06700;Dbxref=Genbank:WP_011407911.1;Name=WP_011407911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571123.1;locus_tag=IXO1104_RS06700;product=MATE family efflux transporter;protein_id=WP_011407911.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1434712 1435119 . + . ID=gene-IXO1104_RS06705;Name=IXO1104_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06705;old_locus_tag=IXO1104_06670 NZ_CP047492.1 Protein Homology CDS 1434712 1435119 . + 0 ID=cds-WP_011407912.1;Parent=gene-IXO1104_RS06705;Dbxref=Genbank:WP_011407912.1;Name=WP_011407912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504229.1;locus_tag=IXO1104_RS06705;product=RNA-binding S4 domain-containing protein;protein_id=WP_011407912.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1435254 1435421 . + . ID=gene-IXO1104_RS06710;Name=IXO1104_RS06710;end_range=1435421,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06710;old_locus_tag=IXO1104_06675;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1435254 1435421 . + 0 ID=cds-IXO1104_RS06710;Parent=gene-IXO1104_RS06710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1435421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1104_RS06710;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1435539 1436753 . + . ID=gene-IXO1104_RS06715;Name=IXO1104_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06715;old_locus_tag=IXO1104_06680 NZ_CP047492.1 Protein Homology CDS 1435539 1436753 . + 0 ID=cds-WP_011407913.1-5;Parent=gene-IXO1104_RS06715;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS06715;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1436773 1438012 . + . ID=gene-IXO1104_RS06720;Name=IXO1104_RS06720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06720;old_locus_tag=IXO1104_06685;partial=true;pseudo=true;start_range=.,1436773 NZ_CP047492.1 Protein Homology CDS 1436773 1438012 . + 0 ID=cds-IXO1104_RS06720;Parent=gene-IXO1104_RS06720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS06720;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1436773;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1438088 1438339 . - . ID=gene-IXO1104_RS06725;Name=IXO1104_RS06725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06725;old_locus_tag=IXO1104_06690;partial=true;pseudo=true;start_range=.,1438088 NZ_CP047492.1 Protein Homology CDS 1438088 1438339 . - 0 ID=cds-IXO1104_RS06725;Parent=gene-IXO1104_RS06725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812100.1;locus_tag=IXO1104_RS06725;partial=true;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;start_range=.,1438088;transl_table=11 NZ_CP047492.1 RefSeq gene 1438384 1438689 . - . ID=gene-IXO1104_RS06730;Name=IXO1104_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06730;old_locus_tag=IXO1104_06695 NZ_CP047492.1 Protein Homology CDS 1438384 1438689 . - 0 ID=cds-WP_011258151.1;Parent=gene-IXO1104_RS06730;Dbxref=Genbank:WP_011258151.1;Name=WP_011258151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258151.1;locus_tag=IXO1104_RS06730;product=GIY-YIG nuclease family protein;protein_id=WP_011258151.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1439135 1441720 . + . ID=gene-IXO1104_RS06735;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS06735;old_locus_tag=IXO1104_06700 NZ_CP047492.1 Protein Homology CDS 1439135 1441720 . + 0 ID=cds-WP_011407916.1;Parent=gene-IXO1104_RS06735;Dbxref=Genbank:WP_011407916.1;Name=WP_011407916.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009580969.1;locus_tag=IXO1104_RS06735;product=ATP-dependent chaperone ClpB;protein_id=WP_011407916.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1441845 1442756 . + . ID=gene-IXO1104_RS06740;Name=IXO1104_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06740;old_locus_tag=IXO1104_06705 NZ_CP047492.1 Protein Homology CDS 1441845 1442756 . + 0 ID=cds-WP_041182015.1;Parent=gene-IXO1104_RS06740;Dbxref=Genbank:WP_041182015.1;Name=WP_041182015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407917.1;locus_tag=IXO1104_RS06740;product=hypothetical protein;protein_id=WP_041182015.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1442757 1442882 . + . ID=gene-IXO1104_RS06745;Name=IXO1104_RS06745;end_range=1442882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06745;partial=true;pseudo=true;start_range=.,1442757 NZ_CP047492.1 Protein Homology CDS 1442757 1442882 . + 0 ID=cds-IXO1104_RS06745;Parent=gene-IXO1104_RS06745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=1442882,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038183.1;locus_tag=IXO1104_RS06745;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,1442757;transl_table=11 NZ_CP047492.1 RefSeq gene 1443031 1444072 . - . ID=gene-IXO1104_RS06750;Name=IXO1104_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06750;old_locus_tag=IXO1104_06715 NZ_CP047492.1 Protein Homology CDS 1443882 1444072 . - 0 ID=cds-WP_241846851.1;Parent=gene-IXO1104_RS06750;Dbxref=Genbank:WP_241846851.1;Name=WP_241846851.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS06750;product=IS3 family transposase;protein_id=WP_241846851.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1443031 1443883 . - 1 ID=cds-WP_241846851.1;Parent=gene-IXO1104_RS06750;Dbxref=Genbank:WP_241846851.1;Name=WP_241846851.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS06750;product=IS3 family transposase;protein_id=WP_241846851.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1444196 1444981 . + . ID=gene-IXO1104_RS06755;Name=IXO1104_RS06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06755;old_locus_tag=IXO1104_06720;partial=true;pseudo=true;start_range=.,1444196 NZ_CP047492.1 Protein Homology CDS 1444196 1444981 . + 0 ID=cds-IXO1104_RS06755;Parent=gene-IXO1104_RS06755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS06755;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1444196;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1444992 1445342 . + . ID=gene-IXO1104_RS06760;Name=IXO1104_RS06760;end_range=1445342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06760;old_locus_tag=IXO1104_06725;partial=true;pseudo=true;start_range=.,1444992 NZ_CP047492.1 Protein Homology CDS 1444992 1445342 . + 0 ID=cds-IXO1104_RS06760;Parent=gene-IXO1104_RS06760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1445342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503409.1;locus_tag=IXO1104_RS06760;partial=true;product=transposase;pseudo=true;start_range=.,1444992;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1445343 1445483 . + . ID=gene-IXO1104_RS06765;Name=IXO1104_RS06765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06765;old_locus_tag=IXO1104_06730;partial=true;pseudo=true;start_range=.,1445343 NZ_CP047492.1 Protein Homology CDS 1445343 1445483 . + 0 ID=cds-IXO1104_RS06765;Parent=gene-IXO1104_RS06765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS06765;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1445343;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 1445650 1445875 . + . ID=id-NZ_CP047492.1:1445650..1445875;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 1445992 1447869 . + . ID=gene-IXO1104_RS06770;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=IXO1104_RS06770;old_locus_tag=IXO1104_06735 NZ_CP047492.1 Protein Homology CDS 1445992 1447869 . + 0 ID=cds-WP_075240592.1;Parent=gene-IXO1104_RS06770;Dbxref=Genbank:WP_075240592.1;Name=WP_075240592.1;Ontology_term=GO:0015889,GO:0015420,GO:0019867;gbkey=CDS;gene=btuB;go_component=outer membrane|0019867||IEA;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117952.1;locus_tag=IXO1104_RS06770;product=TonB-dependent vitamin B12 receptor;protein_id=WP_075240592.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1447931 1448005 . + . ID=gene-IXO1104_RS06775;Name=IXO1104_RS06775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06775;old_locus_tag=IXO1104_06740 NZ_CP047492.1 cmsearch ncRNA 1447931 1448005 . + . ID=rna-IXO1104_RS06775;Parent=gene-IXO1104_RS06775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06775;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1447931 1448005 . + . ID=exon-IXO1104_RS06775-1;Parent=rna-IXO1104_RS06775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06775;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1448096 1449355 . - . ID=gene-IXO1104_RS06780;Name=IXO1104_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06780;old_locus_tag=IXO1104_06745 NZ_CP047492.1 Protein Homology CDS 1448096 1449355 . - 0 ID=cds-WP_230455566.1;Parent=gene-IXO1104_RS06780;Dbxref=Genbank:WP_230455566.1;Name=WP_230455566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=IXO1104_RS06780;product=IS701-like element ISXo15 family transposase;protein_id=WP_230455566.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1449642 1450235 . + . ID=gene-IXO1104_RS06785;Name=IXO1104_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06785;old_locus_tag=IXO1104_06750 NZ_CP047492.1 Protein Homology CDS 1449642 1450235 . + 0 ID=cds-WP_011258160.1;Parent=gene-IXO1104_RS06785;Dbxref=Genbank:WP_011258160.1;Name=WP_011258160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304846.1;locus_tag=IXO1104_RS06785;product=hypothetical protein;protein_id=WP_011258160.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1450235 1450834 . + . ID=gene-IXO1104_RS06790;Name=IXO1104_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06790;old_locus_tag=IXO1104_06755 NZ_CP047492.1 Protein Homology CDS 1450235 1450834 . + 0 ID=cds-WP_027703819.1;Parent=gene-IXO1104_RS06790;Dbxref=Genbank:WP_027703819.1;Name=WP_027703819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963715.1;locus_tag=IXO1104_RS06790;product=hypothetical protein;protein_id=WP_027703819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1450831 1451442 . + . ID=gene-IXO1104_RS06795;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=IXO1104_RS06795;old_locus_tag=IXO1104_06760 NZ_CP047492.1 Protein Homology CDS 1450831 1451442 . + 0 ID=cds-WP_011258162.1;Parent=gene-IXO1104_RS06795;Dbxref=Genbank:WP_011258162.1;Name=WP_011258162.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571051.1;locus_tag=IXO1104_RS06795;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011258162.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1451515 1451853 . + . ID=gene-IXO1104_RS06800;Name=IXO1104_RS06800;end_range=1451853,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06800;old_locus_tag=IXO1104_06765;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1451515 1451853 . + 0 ID=cds-IXO1104_RS06800;Parent=gene-IXO1104_RS06800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1451853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014402739.1;locus_tag=IXO1104_RS06800;partial=true;product=adenosylcobinamide kinase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1451857 1451968 . + . ID=gene-IXO1104_RS06805;Name=IXO1104_RS06805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06805;partial=true;pseudo=true;start_range=.,1451857 NZ_CP047492.1 Protein Homology CDS 1451857 1451968 . + 0 ID=cds-IXO1104_RS06805;Parent=gene-IXO1104_RS06805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913596.1;locus_tag=IXO1104_RS06805;partial=true;product=adenosylcobinamide kinase;pseudo=true;start_range=.,1451857;transl_table=11 NZ_CP047492.1 RefSeq gene 1451956 1452477 . + . ID=gene-IXO1104_RS06810;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=IXO1104_RS06810;old_locus_tag=IXO1104_06770 NZ_CP047492.1 Protein Homology CDS 1451956 1452477 . + 0 ID=cds-WP_011258163.1;Parent=gene-IXO1104_RS06810;Dbxref=Genbank:WP_011258163.1;Name=WP_011258163.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488884.1;locus_tag=IXO1104_RS06810;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_011258163.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1452474 1453520 . + . ID=gene-IXO1104_RS06815;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=IXO1104_RS06815;old_locus_tag=IXO1104_06775 NZ_CP047492.1 Protein Homology CDS 1452474 1453520 . + 0 ID=cds-WP_011407923.1;Parent=gene-IXO1104_RS06815;Dbxref=Genbank:WP_011407923.1;Name=WP_011407923.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304849.1;locus_tag=IXO1104_RS06815;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_011407923.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1453517 1454107 . + . ID=gene-IXO1104_RS06820;Name=IXO1104_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06820;old_locus_tag=IXO1104_06780 NZ_CP047492.1 Protein Homology CDS 1453517 1454107 . + 0 ID=cds-WP_011258165.1;Parent=gene-IXO1104_RS06820;Dbxref=Genbank:WP_011258165.1;Name=WP_011258165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850683.1;locus_tag=IXO1104_RS06820;product=histidine phosphatase family protein;protein_id=WP_011258165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1454104 1454838 . + . ID=gene-IXO1104_RS06825;Name=IXO1104_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06825;old_locus_tag=IXO1104_06785 NZ_CP047492.1 Protein Homology CDS 1454104 1454838 . + 0 ID=cds-WP_011258166.1;Parent=gene-IXO1104_RS06825;Dbxref=Genbank:WP_011258166.1;Name=WP_011258166.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963730.1;locus_tag=IXO1104_RS06825;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_011258166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1454932 1455008 . + . ID=gene-IXO1104_RS06830;Name=IXO1104_RS06830;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06830;old_locus_tag=IXO1104_06790 NZ_CP047492.1 cmsearch ncRNA 1454932 1455008 . + . ID=rna-IXO1104_RS06830;Parent=gene-IXO1104_RS06830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06830;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1454932 1455008 . + . ID=exon-IXO1104_RS06830-1;Parent=rna-IXO1104_RS06830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06830;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1455034 1455990 . - . ID=gene-IXO1104_RS06835;Name=IXO1104_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06835;old_locus_tag=IXO1104_06795 NZ_CP047492.1 Protein Homology CDS 1455034 1455990 . - 0 ID=cds-WP_011407237.1-3;Parent=gene-IXO1104_RS06835;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS06835;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1456065 1457267 . - . ID=gene-IXO1104_RS06840;Name=IXO1104_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06840;old_locus_tag=IXO1104_06800 NZ_CP047492.1 Protein Homology CDS 1456065 1457267 . - 0 ID=cds-WP_075240655.1;Parent=gene-IXO1104_RS06840;Dbxref=Genbank:WP_075240655.1;Name=WP_075240655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305442.1;locus_tag=IXO1104_RS06840;product=type III PLP-dependent enzyme;protein_id=WP_075240655.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1457264 1459033 . - . ID=gene-IXO1104_RS06845;Name=IXO1104_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06845;old_locus_tag=IXO1104_06805 NZ_CP047492.1 Protein Homology CDS 1457264 1459033 . - 0 ID=cds-WP_027703817.1;Parent=gene-IXO1104_RS06845;Dbxref=Genbank:WP_027703817.1;Name=WP_027703817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850679.1;locus_tag=IXO1104_RS06845;product=iron transporter;protein_id=WP_027703817.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1459011 1460207 . - . ID=gene-IXO1104_RS06850;Name=IXO1104_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06850;old_locus_tag=IXO1104_06810 NZ_CP047492.1 Protein Homology CDS 1459011 1460207 . - 0 ID=cds-WP_011258169.1;Parent=gene-IXO1104_RS06850;Dbxref=Genbank:WP_011258169.1;Name=WP_011258169.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160094.1;locus_tag=IXO1104_RS06850;product=MFS transporter;protein_id=WP_011258169.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1460204 1462006 . - . ID=gene-IXO1104_RS06855;Name=IXO1104_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06855;old_locus_tag=IXO1104_06815 NZ_CP047492.1 Protein Homology CDS 1460204 1462006 . - 0 ID=cds-WP_011258170.1;Parent=gene-IXO1104_RS06855;Dbxref=Genbank:WP_011258170.1;Name=WP_011258170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571067.1;locus_tag=IXO1104_RS06855;product=IucA/IucC family siderophore biosynthesis protein;protein_id=WP_011258170.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1462003 1463229 . - . ID=gene-IXO1104_RS06860;Name=IXO1104_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06860;old_locus_tag=IXO1104_06820 NZ_CP047492.1 Protein Homology CDS 1462003 1463229 . - 0 ID=cds-WP_075240656.1;Parent=gene-IXO1104_RS06860;Dbxref=Genbank:WP_075240656.1;Name=WP_075240656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452407.1;locus_tag=IXO1104_RS06860;product=carboxylate--amine ligase;protein_id=WP_075240656.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1463465 1465606 . - . ID=gene-IXO1104_RS06865;Name=IXO1104_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06865;old_locus_tag=IXO1104_06825 NZ_CP047492.1 Protein Homology CDS 1463465 1465606 . - 0 ID=cds-WP_011407927.1;Parent=gene-IXO1104_RS06865;Dbxref=Genbank:WP_011407927.1;Name=WP_011407927.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488864.1;locus_tag=IXO1104_RS06865;product=TonB-dependent siderophore receptor;protein_id=WP_011407927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1465607 1466368 . - . ID=gene-IXO1104_RS06870;Name=IXO1104_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06870;old_locus_tag=IXO1104_06830 NZ_CP047492.1 Protein Homology CDS 1465607 1466368 . - 0 ID=cds-WP_011258173.1;Parent=gene-IXO1104_RS06870;Dbxref=Genbank:WP_011258173.1;Name=WP_011258173.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913611.1;locus_tag=IXO1104_RS06870;product=aldolase/citrate lyase family protein;protein_id=WP_011258173.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1466513 1467614 . + . ID=gene-IXO1104_RS06875;Name=IXO1104_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06875;old_locus_tag=IXO1104_06835 NZ_CP047492.1 Protein Homology CDS 1466513 1466593 . + 0 ID=cds-WP_162531725.1;Parent=gene-IXO1104_RS06875;Dbxref=Genbank:WP_162531725.1;Name=WP_162531725.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS06875;product=IS3 family transposase;protein_id=WP_162531725.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1466595 1467614 . + 0 ID=cds-WP_162531725.1;Parent=gene-IXO1104_RS06875;Dbxref=Genbank:WP_162531725.1;Name=WP_162531725.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS06875;product=IS3 family transposase;protein_id=WP_162531725.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1467778 1469487 . - . ID=gene-IXO1104_RS06880;Name=IXO1104_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06880;old_locus_tag=IXO1104_06840 NZ_CP047492.1 Protein Homology CDS 1467778 1469487 . - 0 ID=cds-WP_075240389.1;Parent=gene-IXO1104_RS06880;Dbxref=Genbank:WP_075240389.1;Name=WP_075240389.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452404.1;locus_tag=IXO1104_RS06880;product=Kef family K(+) transporter;protein_id=WP_075240389.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1470049 1470468 . + . ID=gene-IXO1104_RS06885;Name=IXO1104_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06885 NZ_CP047492.1 GeneMarkS-2+ CDS 1470049 1470468 . + 0 ID=cds-WP_229002644.1;Parent=gene-IXO1104_RS06885;Dbxref=Genbank:WP_229002644.1;Name=WP_229002644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS06885;product=hypothetical protein;protein_id=WP_229002644.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1470586 1472985 . - . ID=gene-IXO1104_RS06890;Name=IXO1104_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06890;old_locus_tag=IXO1104_06845 NZ_CP047492.1 Protein Homology CDS 1470586 1472985 . - 0 ID=cds-WP_012445735.1;Parent=gene-IXO1104_RS06890;Dbxref=Genbank:WP_012445735.1;Name=WP_012445735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090820.1;locus_tag=IXO1104_RS06890;product=TonB-dependent receptor;protein_id=WP_012445735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1473318 1475705 . - . ID=gene-IXO1104_RS06895;Name=IXO1104_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06895;old_locus_tag=IXO1104_06850 NZ_CP047492.1 Protein Homology CDS 1473318 1475705 . - 0 ID=cds-WP_075240391.1;Parent=gene-IXO1104_RS06895;Dbxref=Genbank:WP_075240391.1;Name=WP_075240391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921435.1;locus_tag=IXO1104_RS06895;product=TonB-dependent receptor;protein_id=WP_075240391.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1476444 1478831 . - . ID=gene-IXO1104_RS06900;Name=IXO1104_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06900;old_locus_tag=IXO1104_06855 NZ_CP047492.1 Protein Homology CDS 1476444 1478831 . - 0 ID=cds-WP_075240390.1;Parent=gene-IXO1104_RS06900;Dbxref=Genbank:WP_075240390.1;Name=WP_075240390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156670.1;locus_tag=IXO1104_RS06900;product=TonB-dependent receptor;protein_id=WP_075240390.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1479007 1480923 . + . ID=gene-IXO1104_RS06905;Name=IXO1104_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06905;old_locus_tag=IXO1104_06860 NZ_CP047492.1 Protein Homology CDS 1479007 1480923 . + 0 ID=cds-WP_041182018.1;Parent=gene-IXO1104_RS06905;Dbxref=Genbank:WP_041182018.1;Name=WP_041182018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924596.1;locus_tag=IXO1104_RS06905;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_041182018.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1480998 1481071 . + . ID=gene-IXO1104_RS06910;Name=IXO1104_RS06910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS06910;old_locus_tag=IXO1104_06865 NZ_CP047492.1 cmsearch ncRNA 1480998 1481071 . + . ID=rna-IXO1104_RS06910;Parent=gene-IXO1104_RS06910;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06910;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1480998 1481071 . + . ID=exon-IXO1104_RS06910-1;Parent=rna-IXO1104_RS06910;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS06910;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 1481120 1481621 . + . ID=gene-IXO1104_RS06915;Name=IXO1104_RS06915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06915;old_locus_tag=IXO1104_06870;pseudo=true NZ_CP047492.1 Protein Homology CDS 1481120 1481621 . + 0 ID=cds-IXO1104_RS06915;Parent=gene-IXO1104_RS06915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156668.1;locus_tag=IXO1104_RS06915;product=YcxB family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1481645 1482520 . - . ID=gene-IXO1104_RS06920;Name=ampR;gbkey=Gene;gene=ampR;gene_biotype=protein_coding;locus_tag=IXO1104_RS06920;old_locus_tag=IXO1104_06875 NZ_CP047492.1 Protein Homology CDS 1481645 1482520 . - 0 ID=cds-WP_041182748.1;Parent=gene-IXO1104_RS06920;Dbxref=Genbank:WP_041182748.1;Name=WP_041182748.1;gbkey=CDS;gene=ampR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156667.1;locus_tag=IXO1104_RS06920;product=LysR family transcriptional regulator AmpR;protein_id=WP_041182748.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1482621 1483561 . + . ID=gene-IXO1104_RS06925;Name=bla;gbkey=Gene;gene=bla;gene_biotype=pseudogene;locus_tag=IXO1104_RS06925;old_locus_tag=IXO1104_06880;pseudo=true NZ_CP047492.1 Protein Homology CDS 1482621 1483561 . + 0 ID=cds-IXO1104_RS06925;Parent=gene-IXO1104_RS06925;Note=frameshifted;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258184.1;locus_tag=IXO1104_RS06925;product=class A beta-lactamase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1483631 1484449 . + . ID=gene-IXO1104_RS06930;Name=IXO1104_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06930;old_locus_tag=IXO1104_06885 NZ_CP047492.1 Protein Homology CDS 1483631 1484449 . + 0 ID=cds-WP_033013356.1;Parent=gene-IXO1104_RS06930;Dbxref=Genbank:WP_033013356.1;Name=WP_033013356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407936.1;locus_tag=IXO1104_RS06930;product=alpha/beta hydrolase;protein_id=WP_033013356.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1484532 1486007 . + . ID=gene-IXO1104_RS06935;Name=IXO1104_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06935;old_locus_tag=IXO1104_06890 NZ_CP047492.1 Protein Homology CDS 1484532 1486007 . + 0 ID=cds-WP_164994114.1;Parent=gene-IXO1104_RS06935;Dbxref=Genbank:WP_164994114.1;Name=WP_164994114.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS06935;product=IS5 family transposase;protein_id=WP_164994114.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1486172 1486549 . + . ID=gene-IXO1104_RS06940;Name=IXO1104_RS06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06940;old_locus_tag=IXO1104_06895;pseudo=true NZ_CP047492.1 Protein Homology CDS 1486172 1486549 . + 0 ID=cds-IXO1104_RS06940;Parent=gene-IXO1104_RS06940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009582697.1;locus_tag=IXO1104_RS06940;product=DUF805 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1487059 1487850 . - . ID=gene-IXO1104_RS06945;Name=IXO1104_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06945;old_locus_tag=IXO1104_06900 NZ_CP047492.1 Protein Homology CDS 1487059 1487850 . - 0 ID=cds-WP_075239369.1;Parent=gene-IXO1104_RS06945;Dbxref=Genbank:WP_075239369.1;Name=WP_075239369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156587.1;locus_tag=IXO1104_RS06945;product=response regulator transcription factor;protein_id=WP_075239369.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1488306 1488476 . + . ID=gene-IXO1104_RS06950;Name=IXO1104_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06950 NZ_CP047492.1 Protein Homology CDS 1488306 1488476 . + 0 ID=cds-WP_012445725.1;Parent=gene-IXO1104_RS06950;Dbxref=Genbank:WP_012445725.1;Name=WP_012445725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504254.1;locus_tag=IXO1104_RS06950;product=hypothetical protein;protein_id=WP_012445725.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1488687 1490042 . + . ID=gene-IXO1104_RS06955;Name=IXO1104_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06955;old_locus_tag=IXO1104_06905 NZ_CP047492.1 Protein Homology CDS 1488687 1490042 . + 0 ID=cds-WP_012445724.1;Parent=gene-IXO1104_RS06955;Dbxref=Genbank:WP_012445724.1;Name=WP_012445724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156588.1;locus_tag=IXO1104_RS06955;product=helix-turn-helix transcriptional regulator;protein_id=WP_012445724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1490255 1492123 . + . ID=gene-IXO1104_RS06960;Name=IXO1104_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06960;old_locus_tag=IXO1104_06910 NZ_CP047492.1 Protein Homology CDS 1490255 1492123 . + 0 ID=cds-WP_012445723.1;Parent=gene-IXO1104_RS06960;Dbxref=Genbank:WP_012445723.1;Name=WP_012445723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928780.1;locus_tag=IXO1104_RS06960;product=ATP-binding protein;protein_id=WP_012445723.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1492148 1494472 . + . ID=gene-IXO1104_RS06965;Name=IXO1104_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06965;old_locus_tag=IXO1104_06915 NZ_CP047492.1 Protein Homology CDS 1492148 1494472 . + 0 ID=cds-WP_075240033.1;Parent=gene-IXO1104_RS06965;Dbxref=Genbank:WP_075240033.1;Name=WP_075240033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304704.1;locus_tag=IXO1104_RS06965;product=hypothetical protein;protein_id=WP_075240033.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1495071 1495766 . - . ID=gene-IXO1104_RS06970;Name=IXO1104_RS06970;end_range=1495766,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06970;old_locus_tag=IXO1104_06920;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1495071 1495766 . - 0 ID=cds-IXO1104_RS06970;Parent=gene-IXO1104_RS06970;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1495766,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS06970;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1495778 1496523 . - . ID=gene-IXO1104_RS06975;Name=IXO1104_RS06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06975;old_locus_tag=IXO1104_06925;partial=true;pseudo=true;start_range=.,1495778 NZ_CP047492.1 Protein Homology CDS 1495778 1496523 . - 0 ID=cds-IXO1104_RS06975;Parent=gene-IXO1104_RS06975;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=IXO1104_RS06975;partial=true;product=transposase;pseudo=true;start_range=.,1495778;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1496652 1497107 . - . ID=gene-IXO1104_RS06980;Name=IXO1104_RS06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS06980;old_locus_tag=IXO1104_06930;partial=true;pseudo=true;start_range=.,1496652 NZ_CP047492.1 Protein Homology CDS 1496652 1497107 . - 0 ID=cds-IXO1104_RS06980;Parent=gene-IXO1104_RS06980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS06980;partial=true;product=transposase;pseudo=true;start_range=.,1496652;transl_table=11 NZ_CP047492.1 RefSeq gene 1497262 1498446 . + . ID=gene-IXO1104_RS06985;Name=IXO1104_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06985;old_locus_tag=IXO1104_06935 NZ_CP047492.1 Protein Homology CDS 1497262 1498446 . + 0 ID=cds-WP_011408522.1-2;Parent=gene-IXO1104_RS06985;Dbxref=Genbank:WP_011408522.1;Name=WP_011408522.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS06985;product=IS256 family transposase;protein_id=WP_011408522.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1498538 1499890 . - . ID=gene-IXO1104_RS06990;Name=IXO1104_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06990;old_locus_tag=IXO1104_06940 NZ_CP047492.1 Protein Homology CDS 1498538 1499890 . - 0 ID=cds-WP_075239694.1;Parent=gene-IXO1104_RS06990;Dbxref=Genbank:WP_075239694.1;Name=WP_075239694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466434.1;locus_tag=IXO1104_RS06990;product=glutamine synthetase family protein;protein_id=WP_075239694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1499956 1500891 . - . ID=gene-IXO1104_RS06995;Name=IXO1104_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS06995;old_locus_tag=IXO1104_06945 NZ_CP047492.1 Protein Homology CDS 1499956 1500891 . - 0 ID=cds-WP_011258198.1;Parent=gene-IXO1104_RS06995;Dbxref=Genbank:WP_011258198.1;Name=WP_011258198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407945.1;locus_tag=IXO1104_RS06995;product=homoserine O-succinyltransferase;protein_id=WP_011258198.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1500958 1501542 . - . ID=gene-IXO1104_RS07000;Name=IXO1104_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07000;old_locus_tag=IXO1104_06950 NZ_CP047492.1 Protein Homology CDS 1500958 1501542 . - 0 ID=cds-WP_243743203.1;Parent=gene-IXO1104_RS07000;Dbxref=Genbank:WP_243743203.1;Name=WP_243743203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363243.1;locus_tag=IXO1104_RS07000;product=LysE family transporter;protein_id=WP_243743203.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1501592 1502452 . - . ID=gene-IXO1104_RS07005;Name=IXO1104_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07005;old_locus_tag=IXO1104_06955 NZ_CP047492.1 Protein Homology CDS 1501592 1502452 . - 0 ID=cds-WP_011407947.1;Parent=gene-IXO1104_RS07005;Dbxref=Genbank:WP_011407947.1;Name=WP_011407947.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477131.1;locus_tag=IXO1104_RS07005;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_011407947.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1502470 1503537 . - . ID=gene-IXO1104_RS07010;Name=IXO1104_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07010;old_locus_tag=IXO1104_06960 NZ_CP047492.1 Protein Homology CDS 1502470 1503537 . - 0 ID=cds-WP_011258199.1;Parent=gene-IXO1104_RS07010;Dbxref=Genbank:WP_011258199.1;Name=WP_011258199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302839.1;locus_tag=IXO1104_RS07010;product=fatty acid desaturase family protein;protein_id=WP_011258199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1503537 1504859 . - . ID=gene-IXO1104_RS07015;Name=IXO1104_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07015;old_locus_tag=IXO1104_06965 NZ_CP047492.1 Protein Homology CDS 1503537 1504859 . - 0 ID=cds-WP_075240393.1;Parent=gene-IXO1104_RS07015;Dbxref=Genbank:WP_075240393.1;Name=WP_075240393.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258200.1;locus_tag=IXO1104_RS07015;product=PLP-dependent transferase;protein_id=WP_075240393.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1504859 1506013 . - . ID=gene-IXO1104_RS07020;Name=IXO1104_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07020;old_locus_tag=IXO1104_06970 NZ_CP047492.1 Protein Homology CDS 1504859 1506013 . - 0 ID=cds-WP_075240152.1;Parent=gene-IXO1104_RS07020;Dbxref=Genbank:WP_075240152.1;Name=WP_075240152.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258201.1;locus_tag=IXO1104_RS07020;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_075240152.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1506291 1506542 . - . ID=gene-IXO1104_RS07025;Name=IXO1104_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07025;old_locus_tag=IXO1104_06975 NZ_CP047492.1 Protein Homology CDS 1506291 1506542 . - 0 ID=cds-WP_133265479.1;Parent=gene-IXO1104_RS07025;Dbxref=Genbank:WP_133265479.1;Name=WP_133265479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363233.1;locus_tag=IXO1104_RS07025;product=hypothetical protein;protein_id=WP_133265479.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1507112 1507270 . - . ID=gene-IXO1104_RS07030;Name=IXO1104_RS07030;end_range=1507270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07030;old_locus_tag=IXO1104_06980;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1507112 1507270 . - 0 ID=cds-IXO1104_RS07030;Parent=gene-IXO1104_RS07030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1507270,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1104_RS07030;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1507278 1508164 . - . ID=gene-IXO1104_RS07035;Name=IXO1104_RS07035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07035;old_locus_tag=IXO1104_06985;pseudo=true NZ_CP047492.1 Protein Homology CDS 1507278 1508164 . - 0 ID=cds-IXO1104_RS07035;Parent=gene-IXO1104_RS07035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS07035;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1508252 1509141 . - . ID=gene-IXO1104_RS07040;Name=IXO1104_RS07040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07040;old_locus_tag=IXO1104_06990;partial=true;pseudo=true;start_range=.,1508252 NZ_CP047492.1 Protein Homology CDS 1508252 1509141 . - 0 ID=cds-IXO1104_RS07040;Parent=gene-IXO1104_RS07040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=IXO1104_RS07040;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1508252;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1509270 1509614 . - . ID=gene-IXO1104_RS07045;Name=IXO1104_RS07045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07045;old_locus_tag=IXO1104_06995;partial=true;pseudo=true;start_range=.,1509270 NZ_CP047492.1 Protein Homology CDS 1509270 1509614 . - 0 ID=cds-IXO1104_RS07045;Parent=gene-IXO1104_RS07045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS07045;partial=true;product=transposase;pseudo=true;start_range=.,1509270;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1509686 1509955 . + . ID=gene-IXO1104_RS07050;Name=IXO1104_RS07050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07050;old_locus_tag=IXO1104_07000;partial=true;pseudo=true;start_range=.,1509686 NZ_CP047492.1 Protein Homology CDS 1509686 1509955 . + 0 ID=cds-IXO1104_RS07050;Parent=gene-IXO1104_RS07050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS07050;partial=true;product=transposase;pseudo=true;start_range=.,1509686;transl_table=11 NZ_CP047492.1 RefSeq gene 1510101 1510430 . - . ID=gene-IXO1104_RS07055;Name=IXO1104_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07055;old_locus_tag=IXO1104_07005 NZ_CP047492.1 Protein Homology CDS 1510101 1510430 . - 0 ID=cds-WP_011258205.1;Parent=gene-IXO1104_RS07055;Dbxref=Genbank:WP_011258205.1;Name=WP_011258205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508448.1;locus_tag=IXO1104_RS07055;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_011258205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1510427 1510966 . - . ID=gene-IXO1104_RS07060;Name=IXO1104_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07060;old_locus_tag=IXO1104_07010 NZ_CP047492.1 Protein Homology CDS 1510427 1510966 . - 0 ID=cds-WP_011258206.1;Parent=gene-IXO1104_RS07060;Dbxref=Genbank:WP_011258206.1;Name=WP_011258206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157683.1;locus_tag=IXO1104_RS07060;product=GNAT family N-acetyltransferase;protein_id=WP_011258206.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1511175 1512419 . - . ID=gene-IXO1104_RS07065;Name=IXO1104_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07065;old_locus_tag=IXO1104_07015 NZ_CP047492.1 Protein Homology CDS 1511175 1512419 . - 0 ID=cds-WP_011258207.1;Parent=gene-IXO1104_RS07065;Dbxref=Genbank:WP_011258207.1;Name=WP_011258207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157682.1;locus_tag=IXO1104_RS07065;product=cysteine desulfurase;protein_id=WP_011258207.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1512416 1513678 . - . ID=gene-IXO1104_RS07070;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=IXO1104_RS07070;old_locus_tag=IXO1104_07020 NZ_CP047492.1 Protein Homology CDS 1512416 1513678 . - 0 ID=cds-WP_011258208.1;Parent=gene-IXO1104_RS07070;Dbxref=Genbank:WP_011258208.1;Name=WP_011258208.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090672.1;locus_tag=IXO1104_RS07070;product=Fe-S cluster assembly protein SufD;protein_id=WP_011258208.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1513678 1514442 . - . ID=gene-IXO1104_RS07075;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=IXO1104_RS07075;old_locus_tag=IXO1104_07025 NZ_CP047492.1 Protein Homology CDS 1513678 1514442 . - 0 ID=cds-WP_011407952.1;Parent=gene-IXO1104_RS07075;Dbxref=Genbank:WP_011407952.1;Name=WP_011407952.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157680.1;locus_tag=IXO1104_RS07075;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011407952.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1514700 1516157 . - . ID=gene-IXO1104_RS07080;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=IXO1104_RS07080;old_locus_tag=IXO1104_07030 NZ_CP047492.1 Protein Homology CDS 1514700 1516157 . - 0 ID=cds-WP_011258210.1;Parent=gene-IXO1104_RS07080;Dbxref=Genbank:WP_011258210.1;Name=WP_011258210.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902344.1;locus_tag=IXO1104_RS07080;product=Fe-S cluster assembly protein SufB;protein_id=WP_011258210.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1516173 1516631 . - . ID=gene-IXO1104_RS07085;Name=IXO1104_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07085;old_locus_tag=IXO1104_07035 NZ_CP047492.1 Protein Homology CDS 1516173 1516631 . - 0 ID=cds-WP_011407954.1;Parent=gene-IXO1104_RS07085;Dbxref=Genbank:WP_011407954.1;Name=WP_011407954.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369303.1;locus_tag=IXO1104_RS07085;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_011407954.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1516803 1517270 . + . ID=gene-IXO1104_RS07090;Name=IXO1104_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07090;old_locus_tag=IXO1104_07040 NZ_CP047492.1 Protein Homology CDS 1516803 1517270 . + 0 ID=cds-WP_003487757.1;Parent=gene-IXO1104_RS07090;Dbxref=Genbank:WP_003487757.1;Name=WP_003487757.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=IXO1104_RS07090;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_003487757.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1517375 1517578 . + . ID=gene-IXO1104_RS07095;Name=IXO1104_RS07095;end_range=1517578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07095;old_locus_tag=IXO1104_07045;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1517375 1517578 . + 0 ID=cds-IXO1104_RS07095;Parent=gene-IXO1104_RS07095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1517578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157678.1;locus_tag=IXO1104_RS07095;partial=true;product=peptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1517588 1517664 . - . ID=gene-IXO1104_RS07100;Name=IXO1104_RS07100;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07100;old_locus_tag=IXO1104_07050 NZ_CP047492.1 cmsearch ncRNA 1517588 1517664 . - . ID=rna-IXO1104_RS07100;Parent=gene-IXO1104_RS07100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07100;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1517588 1517664 . - . ID=exon-IXO1104_RS07100-1;Parent=rna-IXO1104_RS07100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07100;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 1517724 1518080 . + . ID=gene-IXO1104_RS07105;Name=IXO1104_RS07105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07105;old_locus_tag=IXO1104_07055;partial=true;pseudo=true;start_range=.,1517724 NZ_CP047492.1 Protein Homology CDS 1517724 1518080 . + 0 ID=cds-IXO1104_RS07105;Parent=gene-IXO1104_RS07105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157678.1;locus_tag=IXO1104_RS07105;partial=true;product=DJ-1/PfpI family protein;pseudo=true;start_range=.,1517724;transl_table=11 NZ_CP047492.1 RefSeq gene 1518198 1518794 . - . ID=gene-IXO1104_RS07110;Name=IXO1104_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07110;old_locus_tag=IXO1104_07060 NZ_CP047492.1 Protein Homology CDS 1518198 1518794 . - 0 ID=cds-WP_011258212.1;Parent=gene-IXO1104_RS07110;Dbxref=Genbank:WP_011258212.1;Name=WP_011258212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487749.1;locus_tag=IXO1104_RS07110;product=DUF1439 domain-containing protein;protein_id=WP_011258212.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1518850 1519206 . - . ID=gene-IXO1104_RS07115;Name=IXO1104_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07115;old_locus_tag=IXO1104_07065 NZ_CP047492.1 Protein Homology CDS 1518850 1519206 . - 0 ID=cds-WP_027703897.1;Parent=gene-IXO1104_RS07115;Dbxref=Genbank:WP_027703897.1;Name=WP_027703897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157676.1;locus_tag=IXO1104_RS07115;product=hypothetical protein;protein_id=WP_027703897.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1519450 1519791 . - . ID=gene-IXO1104_RS07120;Name=IXO1104_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07120;old_locus_tag=IXO1104_07070 NZ_CP047492.1 Protein Homology CDS 1519450 1519791 . - 0 ID=cds-WP_011407958.1;Parent=gene-IXO1104_RS07120;Dbxref=Genbank:WP_011407958.1;Name=WP_011407958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157675.1;locus_tag=IXO1104_RS07120;product=DUF3861 domain-containing protein;protein_id=WP_011407958.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1519849 1520490 . - . ID=gene-IXO1104_RS07125;Name=IXO1104_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07125;old_locus_tag=IXO1104_07075 NZ_CP047492.1 Protein Homology CDS 1519849 1520490 . - 0 ID=cds-WP_042464628.1;Parent=gene-IXO1104_RS07125;Dbxref=Genbank:WP_042464628.1;Name=WP_042464628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157674.1;locus_tag=IXO1104_RS07125;product=M23 family metallopeptidase;protein_id=WP_042464628.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1520596 1521021 . - . ID=gene-IXO1104_RS07130;Name=IXO1104_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07130;old_locus_tag=IXO1104_07080 NZ_CP047492.1 Protein Homology CDS 1520596 1521021 . - 0 ID=cds-WP_011258216.1;Parent=gene-IXO1104_RS07130;Dbxref=Genbank:WP_011258216.1;Name=WP_011258216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502532.1;locus_tag=IXO1104_RS07130;product=HU family DNA-binding protein;protein_id=WP_011258216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1521666 1522985 . - . ID=gene-IXO1104_RS07135;Name=IXO1104_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07135;old_locus_tag=IXO1104_07085 NZ_CP047492.1 Protein Homology CDS 1521666 1522985 . - 0 ID=cds-WP_164994115.1;Parent=gene-IXO1104_RS07135;Dbxref=Genbank:WP_164994115.1;Name=WP_164994115.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS07135;product=IS701 family transposase;protein_id=WP_164994115.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1523056 1523916 . - . ID=gene-IXO1104_RS07140;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=IXO1104_RS07140;old_locus_tag=IXO1104_07090 NZ_CP047492.1 Protein Homology CDS 1523056 1523916 . - 0 ID=cds-WP_011407961.1;Parent=gene-IXO1104_RS07140;Dbxref=Genbank:WP_011407961.1;Name=WP_011407961.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348110.1;locus_tag=IXO1104_RS07140;product=pyrroline-5-carboxylate reductase;protein_id=WP_011407961.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1523960 1524652 . - . ID=gene-IXO1104_RS07145;Name=IXO1104_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07145;old_locus_tag=IXO1104_07095 NZ_CP047492.1 Protein Homology CDS 1523960 1524652 . - 0 ID=cds-WP_011407962.1;Parent=gene-IXO1104_RS07145;Dbxref=Genbank:WP_011407962.1;Name=WP_011407962.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157671.1;locus_tag=IXO1104_RS07145;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_011407962.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1525016 1526053 . + . ID=gene-IXO1104_RS07150;Name=IXO1104_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07150;old_locus_tag=IXO1104_07100 NZ_CP047492.1 Protein Homology CDS 1525016 1526053 . + 0 ID=cds-WP_011258220.1;Parent=gene-IXO1104_RS07150;Dbxref=Genbank:WP_011258220.1;Name=WP_011258220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185385.1;locus_tag=IXO1104_RS07150;product=type IV pilus twitching motility protein PilT;protein_id=WP_011258220.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1526167 1527297 . + . ID=gene-IXO1104_RS07155;Name=IXO1104_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07155;old_locus_tag=IXO1104_07105 NZ_CP047492.1 Protein Homology CDS 1526167 1527297 . + 0 ID=cds-WP_011407963.1;Parent=gene-IXO1104_RS07155;Dbxref=Genbank:WP_011407963.1;Name=WP_011407963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489921.1;locus_tag=IXO1104_RS07155;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_011407963.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1527569 1528243 . + . ID=gene-IXO1104_RS07160;Name=IXO1104_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07160;old_locus_tag=IXO1104_07110 NZ_CP047492.1 Protein Homology CDS 1527569 1528243 . + 0 ID=cds-WP_027703695.1;Parent=gene-IXO1104_RS07160;Dbxref=Genbank:WP_027703695.1;Name=WP_027703695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851096.1;locus_tag=IXO1104_RS07160;product=YitT family protein;protein_id=WP_027703695.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1528273 1528348 . - . ID=gene-IXO1104_RS07165;Name=IXO1104_RS07165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07165;old_locus_tag=IXO1104_07115 NZ_CP047492.1 cmsearch ncRNA 1528273 1528348 . - . ID=rna-IXO1104_RS07165;Parent=gene-IXO1104_RS07165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07165;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1528273 1528348 . - . ID=exon-IXO1104_RS07165-1;Parent=rna-IXO1104_RS07165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07165;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1528867 1529439 . - . ID=gene-IXO1104_RS07170;Name=IXO1104_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07170;old_locus_tag=IXO1104_07125 NZ_CP047492.1 Protein Homology CDS 1528867 1529439 . - 0 ID=cds-WP_011407966.1;Parent=gene-IXO1104_RS07170;Dbxref=Genbank:WP_011407966.1;Name=WP_011407966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502539.1;locus_tag=IXO1104_RS07170;product=DNA-3-methyladenine glycosylase I;protein_id=WP_011407966.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1529436 1529870 . - . ID=gene-IXO1104_RS07175;Name=IXO1104_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07175 NZ_CP047492.1 GeneMarkS-2+ CDS 1529436 1529870 . - 0 ID=cds-WP_027703694.1;Parent=gene-IXO1104_RS07175;Dbxref=Genbank:WP_027703694.1;Name=WP_027703694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07175;product=hypothetical protein;protein_id=WP_027703694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1529899 1530639 . - . ID=gene-IXO1104_RS07180;Name=IXO1104_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07180 NZ_CP047492.1 Protein Homology CDS 1529899 1530639 . - 0 ID=cds-WP_241846834.1;Parent=gene-IXO1104_RS07180;Dbxref=Genbank:WP_241846834.1;Name=WP_241846834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407968.1;locus_tag=IXO1104_RS07180;product=hypothetical protein;protein_id=WP_241846834.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1530715 1531281 . + . ID=gene-IXO1104_RS07185;Name=IXO1104_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07185;old_locus_tag=IXO1104_07135 NZ_CP047492.1 Protein Homology CDS 1530715 1531281 . + 0 ID=cds-WP_011258225.1;Parent=gene-IXO1104_RS07185;Dbxref=Genbank:WP_011258225.1;Name=WP_011258225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802054.1;locus_tag=IXO1104_RS07185;product=YqgE/AlgH family protein;protein_id=WP_011258225.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1531274 1531741 . + . ID=gene-IXO1104_RS07190;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=IXO1104_RS07190;old_locus_tag=IXO1104_07140 NZ_CP047492.1 Protein Homology CDS 1531274 1531741 . + 0 ID=cds-WP_011407969.1;Parent=gene-IXO1104_RS07190;Dbxref=Genbank:WP_011407969.1;Name=WP_011407969.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302529.1;locus_tag=IXO1104_RS07190;product=Holliday junction resolvase RuvX;protein_id=WP_011407969.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1531755 1532702 . + . ID=gene-IXO1104_RS07195;Name=IXO1104_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07195;old_locus_tag=IXO1104_07145 NZ_CP047492.1 Protein Homology CDS 1531755 1532702 . + 0 ID=cds-WP_011258227.1;Parent=gene-IXO1104_RS07195;Dbxref=Genbank:WP_011258227.1;Name=WP_011258227.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913284.1;locus_tag=IXO1104_RS07195;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_011258227.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1532762 1532837 . + . ID=gene-IXO1104_RS07200;Name=IXO1104_RS07200;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07200;old_locus_tag=IXO1104_07150 NZ_CP047492.1 cmsearch ncRNA 1532762 1532837 . + . ID=rna-IXO1104_RS07200;Parent=gene-IXO1104_RS07200;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07200;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1532762 1532837 . + . ID=exon-IXO1104_RS07200-1;Parent=rna-IXO1104_RS07200;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07200;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1533149 1533583 . + . ID=gene-IXO1104_RS07205;Name=IXO1104_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07205;old_locus_tag=IXO1104_07155 NZ_CP047492.1 Protein Homology CDS 1533149 1533583 . + 0 ID=cds-WP_011258228.1;Parent=gene-IXO1104_RS07205;Dbxref=Genbank:WP_011258228.1;Name=WP_011258228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159920.1;locus_tag=IXO1104_RS07205;product=OsmC family protein;protein_id=WP_011258228.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1533736 1534335 . + . ID=gene-IXO1104_RS07210;Name=IXO1104_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07210;old_locus_tag=IXO1104_07160 NZ_CP047492.1 Protein Homology CDS 1533736 1534335 . + 0 ID=cds-WP_027703692.1;Parent=gene-IXO1104_RS07210;Dbxref=Genbank:WP_027703692.1;Name=WP_027703692.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157223.1;locus_tag=IXO1104_RS07210;product=glycine zipper 2TM domain-containing protein;protein_id=WP_027703692.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1534623 1535504 . - . ID=gene-IXO1104_RS07215;Name=IXO1104_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07215;old_locus_tag=IXO1104_07165 NZ_CP047492.1 Protein Homology CDS 1534623 1535504 . - 0 ID=cds-WP_012445697.1;Parent=gene-IXO1104_RS07215;Dbxref=Genbank:WP_012445697.1;Name=WP_012445697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369373.1;locus_tag=IXO1104_RS07215;product=PhzF family phenazine biosynthesis protein;protein_id=WP_012445697.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1535536 1536421 . - . ID=gene-IXO1104_RS07220;Name=IXO1104_RS07220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07220;old_locus_tag=IXO1104_07170;pseudo=true NZ_CP047492.1 Protein Homology CDS 1535536 1536421 . - 0 ID=cds-IXO1104_RS07220;Parent=gene-IXO1104_RS07220;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375445.1;locus_tag=IXO1104_RS07220;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1536604 1539213 . + . ID=gene-IXO1104_RS07225;Name=IXO1104_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07225;old_locus_tag=IXO1104_07175 NZ_CP047492.1 Protein Homology CDS 1536604 1539213 . + 0 ID=cds-WP_027703691.1;Parent=gene-IXO1104_RS07225;Dbxref=Genbank:WP_027703691.1;Name=WP_027703691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090660.1;locus_tag=IXO1104_RS07225;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=WP_027703691.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1539197 1539655 . + . ID=gene-IXO1104_RS07230;Name=IXO1104_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07230;old_locus_tag=IXO1104_07180 NZ_CP047492.1 Protein Homology CDS 1539197 1539655 . + 0 ID=cds-WP_011258234.1;Parent=gene-IXO1104_RS07230;Dbxref=Genbank:WP_011258234.1;Name=WP_011258234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502553.1;locus_tag=IXO1104_RS07230;product=hypothetical protein;protein_id=WP_011258234.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1539652 1541007 . + . ID=gene-IXO1104_RS07235;Name=IXO1104_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07235;old_locus_tag=IXO1104_07185 NZ_CP047492.1 Protein Homology CDS 1539652 1541007 . + 0 ID=cds-WP_011258235.1;Parent=gene-IXO1104_RS07235;Dbxref=Genbank:WP_011258235.1;Name=WP_011258235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258235.1;locus_tag=IXO1104_RS07235;product=hypothetical protein;protein_id=WP_011258235.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1540988 1542394 . + . ID=gene-IXO1104_RS07240;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=IXO1104_RS07240;old_locus_tag=IXO1104_07190 NZ_CP047492.1 Protein Homology CDS 1540988 1542394 . + 0 ID=cds-WP_075240383.1;Parent=gene-IXO1104_RS07240;Dbxref=Genbank:WP_075240383.1;Name=WP_075240383.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157217.1;locus_tag=IXO1104_RS07240;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_075240383.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1542711 1543505 . + . ID=gene-IXO1104_RS07245;Name=IXO1104_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07245;old_locus_tag=IXO1104_07195 NZ_CP047492.1 Protein Homology CDS 1542711 1543505 . + 0 ID=cds-WP_011258237.1;Parent=gene-IXO1104_RS07245;Dbxref=Genbank:WP_011258237.1;Name=WP_011258237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502557.1;locus_tag=IXO1104_RS07245;product=dienelactone hydrolase family protein;protein_id=WP_011258237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1543690 1544688 . - . ID=gene-IXO1104_RS07250;Name=IXO1104_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07250;old_locus_tag=IXO1104_07200 NZ_CP047492.1 Protein Homology CDS 1543690 1544688 . - 0 ID=cds-WP_011258238.1;Parent=gene-IXO1104_RS07250;Dbxref=Genbank:WP_011258238.1;Name=WP_011258238.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966188.1;locus_tag=IXO1104_RS07250;product=polyprenyl synthetase family protein;protein_id=WP_011258238.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1544964 1545500 . + . ID=gene-IXO1104_RS07255;Name=IXO1104_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07255;old_locus_tag=IXO1104_07205 NZ_CP047492.1 Protein Homology CDS 1544964 1545500 . + 0 ID=cds-WP_011258239.1;Parent=gene-IXO1104_RS07255;Dbxref=Genbank:WP_011258239.1;Name=WP_011258239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157214.1;locus_tag=IXO1104_RS07255;product=single-stranded DNA-binding protein;protein_id=WP_011258239.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1545783 1546199 . - . ID=gene-IXO1104_RS07260;Name=IXO1104_RS07260;end_range=1546199,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07260;old_locus_tag=IXO1104_07210;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1545783 1546199 . - 0 ID=cds-IXO1104_RS07260;Parent=gene-IXO1104_RS07260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1546199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157213.1;locus_tag=IXO1104_RS07260;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1546292 1547248 . + . ID=gene-IXO1104_RS07265;Name=IXO1104_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07265;old_locus_tag=IXO1104_07215 NZ_CP047492.1 Protein Homology CDS 1546292 1547248 . + 0 ID=cds-WP_041182545.1-2;Parent=gene-IXO1104_RS07265;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS07265;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1547257 1548237 . - . ID=gene-IXO1104_RS07270;Name=IXO1104_RS07270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07270;old_locus_tag=IXO1104_07220;partial=true;pseudo=true;start_range=.,1547257 NZ_CP047492.1 Protein Homology CDS 1547257 1548237 . - 0 ID=cds-IXO1104_RS07270;Parent=gene-IXO1104_RS07270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157213.1;locus_tag=IXO1104_RS07270;partial=true;product=cache domain-containing protein;pseudo=true;start_range=.,1547257;transl_table=11 NZ_CP047492.1 RefSeq gene 1548398 1549161 . - . ID=gene-IXO1104_RS07275;Name=IXO1104_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07275;old_locus_tag=IXO1104_07225 NZ_CP047492.1 Protein Homology CDS 1548846 1549161 . - 0 ID=cds-WP_094187715.1-5;Parent=gene-IXO1104_RS07275;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS07275;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1548398 1548846 . - 2 ID=cds-WP_094187715.1-5;Parent=gene-IXO1104_RS07275;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS07275;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1549284 1550281 . + . ID=gene-IXO1104_RS07280;Name=IXO1104_RS07280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07280;old_locus_tag=IXO1104_07230;pseudo=true NZ_CP047492.1 Protein Homology CDS 1549284 1550281 . + 0 ID=cds-IXO1104_RS07280;Parent=gene-IXO1104_RS07280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166271.1;locus_tag=IXO1104_RS07280;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1550352 1551191 . + . ID=gene-IXO1104_RS07285;Name=IXO1104_RS07285;end_range=1551191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07285;old_locus_tag=IXO1104_07235;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1550352 1551191 . + 0 ID=cds-IXO1104_RS07285;Parent=gene-IXO1104_RS07285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1551191,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS07285;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1551278 1552243 . + . ID=gene-IXO1104_RS07290;Name=IXO1104_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07290;old_locus_tag=IXO1104_07240 NZ_CP047492.1 Protein Homology CDS 1551278 1552243 . + 0 ID=cds-WP_109182027.1-3;Parent=gene-IXO1104_RS07290;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS07290;product=IS1595 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1552250 1552387 . - . ID=gene-IXO1104_RS07295;Name=IXO1104_RS07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07295;old_locus_tag=IXO1104_07245;partial=true;pseudo=true;start_range=.,1552250 NZ_CP047492.1 Protein Homology CDS 1552250 1552387 . - 0 ID=cds-IXO1104_RS07295;Parent=gene-IXO1104_RS07295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112231.1;locus_tag=IXO1104_RS07295;partial=true;product=ankyrin repeat domain-containing protein;pseudo=true;start_range=.,1552250;transl_table=11 NZ_CP047492.1 RefSeq gene 1552595 1553299 . + . ID=gene-IXO1104_RS07300;Name=IXO1104_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07300;old_locus_tag=IXO1104_07250 NZ_CP047492.1 Protein Homology CDS 1552595 1553299 . + 0 ID=cds-WP_027703294.1;Parent=gene-IXO1104_RS07300;Dbxref=Genbank:WP_027703294.1;Name=WP_027703294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174244.1;locus_tag=IXO1104_RS07300;product=HAD family hydrolase;protein_id=WP_027703294.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1553350 1553426 . - . ID=gene-IXO1104_RS07305;Name=IXO1104_RS07305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07305;old_locus_tag=IXO1104_07255 NZ_CP047492.1 cmsearch ncRNA 1553350 1553426 . - . ID=rna-IXO1104_RS07305;Parent=gene-IXO1104_RS07305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07305;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1553350 1553426 . - . ID=exon-IXO1104_RS07305-1;Parent=rna-IXO1104_RS07305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07305;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1553837 1554061 . - . ID=gene-IXO1104_RS07310;Name=IXO1104_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07310;old_locus_tag=IXO1104_07260 NZ_CP047492.1 Protein Homology CDS 1553837 1554061 . - 0 ID=cds-WP_005926176.1;Parent=gene-IXO1104_RS07310;Dbxref=Genbank:WP_005926176.1;Name=WP_005926176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508400.1;locus_tag=IXO1104_RS07310;product=CstA-like transporter-associated (seleno)protein;protein_id=WP_005926176.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1554061 1556133 . - . ID=gene-IXO1104_RS07315;Name=IXO1104_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07315;old_locus_tag=IXO1104_07265 NZ_CP047492.1 Protein Homology CDS 1554061 1556133 . - 0 ID=cds-WP_027703293.1;Parent=gene-IXO1104_RS07315;Dbxref=Genbank:WP_027703293.1;Name=WP_027703293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802008.1;locus_tag=IXO1104_RS07315;product=carbon starvation protein A;protein_id=WP_027703293.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1556364 1557221 . + . ID=gene-IXO1104_RS07320;Name=IXO1104_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07320;old_locus_tag=IXO1104_07270 NZ_CP047492.1 Protein Homology CDS 1556364 1557221 . + 0 ID=cds-WP_075240412.1;Parent=gene-IXO1104_RS07320;Dbxref=Genbank:WP_075240412.1;Name=WP_075240412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157199.1;locus_tag=IXO1104_RS07320;product=pirin family protein;protein_id=WP_075240412.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1557255 1557710 . + . ID=gene-IXO1104_RS07325;Name=IXO1104_RS07325;end_range=1557710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07325;old_locus_tag=IXO1104_07275;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1557255 1557710 . + 0 ID=cds-IXO1104_RS07325;Parent=gene-IXO1104_RS07325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1557710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157198.1;locus_tag=IXO1104_RS07325;partial=true;product=OsmC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1557837 1560659 . + . ID=gene-IXO1104_RS07330;Name=IXO1104_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07330;old_locus_tag=IXO1104_07280 NZ_CP047492.1 Protein Homology CDS 1557837 1560659 . + 0 ID=cds-WP_206737953.1;Parent=gene-IXO1104_RS07330;Dbxref=Genbank:WP_206737953.1;Name=WP_206737953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502387.1;locus_tag=IXO1104_RS07330;product=type VI secretion system tip protein VgrG;protein_id=WP_206737953.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1560665 1561480 . + . ID=gene-IXO1104_RS07335;Name=IXO1104_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07335;old_locus_tag=IXO1104_07285 NZ_CP047492.1 Protein Homology CDS 1560665 1561480 . + 0 ID=cds-WP_229002639.1;Parent=gene-IXO1104_RS07335;Dbxref=Genbank:WP_229002639.1;Name=WP_229002639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009604057.1;locus_tag=IXO1104_RS07335;product=DUF4123 domain-containing protein;protein_id=WP_229002639.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1561473 1562069 . + . ID=gene-IXO1104_RS07340;Name=IXO1104_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07340;old_locus_tag=IXO1104_07290 NZ_CP047492.1 Protein Homology CDS 1561473 1562069 . + 0 ID=cds-WP_075240579.1;Parent=gene-IXO1104_RS07340;Dbxref=Genbank:WP_075240579.1;Name=WP_075240579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409212.1;locus_tag=IXO1104_RS07340;product=DUF3304 domain-containing protein;protein_id=WP_075240579.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1562141 1563037 . + . ID=gene-IXO1104_RS07345;Name=IXO1104_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07345;old_locus_tag=IXO1104_07295 NZ_CP047492.1 Protein Homology CDS 1562141 1563037 . + 0 ID=cds-WP_241846835.1;Parent=gene-IXO1104_RS07345;Dbxref=Genbank:WP_241846835.1;Name=WP_241846835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445682.1;locus_tag=IXO1104_RS07345;product=DUF2235 domain-containing protein;protein_id=WP_241846835.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1563037 1563645 . + . ID=gene-IXO1104_RS07350;Name=IXO1104_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07350;old_locus_tag=IXO1104_07300 NZ_CP047492.1 Protein Homology CDS 1563037 1563645 . + 0 ID=cds-WP_075240577.1;Parent=gene-IXO1104_RS07350;Dbxref=Genbank:WP_075240577.1;Name=WP_075240577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009604060.1;locus_tag=IXO1104_RS07350;product=DUF3304 domain-containing protein;protein_id=WP_075240577.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1563645 1565876 . + . ID=gene-IXO1104_RS07355;Name=IXO1104_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07355;old_locus_tag=IXO1104_07305 NZ_CP047492.1 Protein Homology CDS 1563645 1565876 . + 0 ID=cds-WP_075240576.1;Parent=gene-IXO1104_RS07355;Dbxref=Genbank:WP_075240576.1;Name=WP_075240576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409211.1;locus_tag=IXO1104_RS07355;product=DUF2235 domain-containing protein;protein_id=WP_075240576.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1565857 1566246 . + . ID=gene-IXO1104_RS07360;Name=IXO1104_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07360;old_locus_tag=IXO1104_07310 NZ_CP047492.1 Protein Homology CDS 1565857 1566246 . + 0 ID=cds-WP_011259961.1;Parent=gene-IXO1104_RS07360;Dbxref=Genbank:WP_011259961.1;Name=WP_011259961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259961.1;locus_tag=IXO1104_RS07360;product=DUF2345 domain-containing protein;protein_id=WP_011259961.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1566281 1567513 . - . ID=gene-IXO1104_RS07365;Name=IXO1104_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07365;old_locus_tag=IXO1104_07315 NZ_CP047492.1 Protein Homology CDS 1566281 1567513 . - 0 ID=cds-WP_241846836.1;Parent=gene-IXO1104_RS07365;Dbxref=Genbank:WP_241846836.1;Name=WP_241846836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259951.1;locus_tag=IXO1104_RS07365;product=type VI secretion system Vgr family protein;protein_id=WP_241846836.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1567536 1568351 . - . ID=gene-IXO1104_RS07370;Name=IXO1104_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07370;old_locus_tag=IXO1104_07320 NZ_CP047492.1 GeneMarkS-2+ CDS 1567536 1568351 . - 0 ID=cds-WP_128415339.1;Parent=gene-IXO1104_RS07370;Dbxref=Genbank:WP_128415339.1;Name=WP_128415339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07370;product=hypothetical protein;protein_id=WP_128415339.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1568348 1571242 . - . ID=gene-IXO1104_RS07375;Name=IXO1104_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07375;old_locus_tag=IXO1104_07325 NZ_CP047492.1 Protein Homology CDS 1568348 1571242 . - 0 ID=cds-WP_075240691.1;Parent=gene-IXO1104_RS07375;Dbxref=Genbank:WP_075240691.1;Name=WP_075240691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469730.1;locus_tag=IXO1104_RS07375;product=calcium-binding protein;protein_id=WP_075240691.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1571267 1573363 . - . ID=gene-IXO1104_RS07380;Name=IXO1104_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07380;old_locus_tag=IXO1104_07330 NZ_CP047492.1 Protein Homology CDS 1571267 1573363 . - 0 ID=cds-WP_263117877.1;Parent=gene-IXO1104_RS07380;Dbxref=Genbank:WP_263117877.1;Name=WP_263117877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259949.1;locus_tag=IXO1104_RS07380;product=type VI secretion system tip protein VgrG;protein_id=WP_263117877.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1573476 1573670 . - . ID=gene-IXO1104_RS07385;Name=IXO1104_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07385;old_locus_tag=IXO1104_07335 NZ_CP047492.1 GeneMarkS-2+ CDS 1573476 1573670 . - 0 ID=cds-WP_080493780.1;Parent=gene-IXO1104_RS07385;Dbxref=Genbank:WP_080493780.1;Name=WP_080493780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07385;product=hypothetical protein;protein_id=WP_080493780.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1573784 1574968 . - . ID=gene-IXO1104_RS07390;Name=IXO1104_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07390;old_locus_tag=IXO1104_07340 NZ_CP047492.1 Protein Homology CDS 1573784 1574968 . - 0 ID=cds-WP_011408522.1-3;Parent=gene-IXO1104_RS07390;Dbxref=Genbank:WP_011408522.1;Name=WP_011408522.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS07390;product=IS256 family transposase;protein_id=WP_011408522.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1575068 1576444 . + . ID=gene-IXO1104_RS07395;Name=IXO1104_RS07395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07395;old_locus_tag=IXO1104_07345;pseudo=true NZ_CP047492.1 Protein Homology CDS 1575068 1576444 . + 0 ID=cds-IXO1104_RS07395;Parent=gene-IXO1104_RS07395;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1104_RS07395;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1576657 1577259 . - . ID=gene-IXO1104_RS07400;Name=IXO1104_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07400;old_locus_tag=IXO1104_07350 NZ_CP047492.1 GeneMarkS-2+ CDS 1576657 1577259 . - 0 ID=cds-WP_131824951.1;Parent=gene-IXO1104_RS07400;Dbxref=Genbank:WP_131824951.1;Name=WP_131824951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07400;product=hypothetical protein;protein_id=WP_131824951.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1577256 1579424 . - . ID=gene-IXO1104_RS07405;Name=IXO1104_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07405;old_locus_tag=IXO1104_07355 NZ_CP047492.1 Protein Homology CDS 1577256 1579424 . - 0 ID=cds-WP_075240692.1;Parent=gene-IXO1104_RS07405;Dbxref=Genbank:WP_075240692.1;Name=WP_075240692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=IXO1104_RS07405;product=M23 family metallopeptidase;protein_id=WP_075240692.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1579429 1581963 . - . ID=gene-IXO1104_RS07410;Name=IXO1104_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07410;old_locus_tag=IXO1104_07360 NZ_CP047492.1 Protein Homology CDS 1579429 1581963 . - 0 ID=cds-WP_263117879.1;Parent=gene-IXO1104_RS07410;Dbxref=Genbank:WP_263117879.1;Name=WP_263117879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264661.1;locus_tag=IXO1104_RS07410;product=type VI secretion system tip protein VgrG;protein_id=WP_263117879.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1581974 1582765 . - . ID=gene-IXO1104_RS07415;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS07415;old_locus_tag=IXO1104_07365 NZ_CP047492.1 Protein Homology CDS 1581974 1582765 . - 0 ID=cds-WP_181693673.1;Parent=gene-IXO1104_RS07415;Dbxref=Genbank:WP_181693673.1;Name=WP_181693673.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304316.1;locus_tag=IXO1104_RS07415;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_181693673.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1582762 1583700 . - . ID=gene-IXO1104_RS07420;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IXO1104_RS07420;old_locus_tag=IXO1104_07370 NZ_CP047492.1 Protein Homology CDS 1582762 1583700 . - 0 ID=cds-WP_229001946.1;Parent=gene-IXO1104_RS07420;Dbxref=Genbank:WP_229001946.1;Name=WP_229001946.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03353.1;locus_tag=IXO1104_RS07420;product=type VI secretion system baseplate subunit TssK;protein_id=WP_229001946.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1583747 1584826 . - . ID=gene-IXO1104_RS07425;Name=IXO1104_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07425;old_locus_tag=IXO1104_07375 NZ_CP047492.1 Protein Homology CDS 1583747 1584826 . - 0 ID=cds-WP_075240701.1;Parent=gene-IXO1104_RS07425;Dbxref=Genbank:WP_075240701.1;Name=WP_075240701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=IXO1104_RS07425;product=Imm71 family immunity protein;protein_id=WP_075240701.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1584823 1586256 . - . ID=gene-IXO1104_RS07430;Name=IXO1104_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07430;old_locus_tag=IXO1104_07380 NZ_CP047492.1 Protein Homology CDS 1584823 1586256 . - 0 ID=cds-WP_164994116.1;Parent=gene-IXO1104_RS07430;Dbxref=Genbank:WP_164994116.1;Name=WP_164994116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502402.1;locus_tag=IXO1104_RS07430;product=hypothetical protein;protein_id=WP_164994116.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1586265 1587344 . - . ID=gene-IXO1104_RS07435;Name=IXO1104_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07435;old_locus_tag=IXO1104_07385 NZ_CP047492.1 Protein Homology CDS 1586265 1587344 . - 0 ID=cds-WP_075240699.1;Parent=gene-IXO1104_RS07435;Dbxref=Genbank:WP_075240699.1;Name=WP_075240699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=IXO1104_RS07435;product=Imm71 family immunity protein;protein_id=WP_075240699.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1587341 1588762 . - . ID=gene-IXO1104_RS07440;Name=IXO1104_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07440;old_locus_tag=IXO1104_07390 NZ_CP047492.1 Protein Homology CDS 1587341 1588762 . - 0 ID=cds-WP_241846839.1;Parent=gene-IXO1104_RS07440;Dbxref=Genbank:WP_241846839.1;Name=WP_241846839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502402.1;locus_tag=IXO1104_RS07440;product=hypothetical protein;protein_id=WP_241846839.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1588888 1591716 . - . ID=gene-IXO1104_RS07445;Name=IXO1104_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07445;old_locus_tag=IXO1104_07395 NZ_CP047492.1 Protein Homology CDS 1588888 1591716 . - 0 ID=cds-WP_206737947.1;Parent=gene-IXO1104_RS07445;Dbxref=Genbank:WP_206737947.1;Name=WP_206737947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264661.1;locus_tag=IXO1104_RS07445;product=type VI secretion system tip protein VgrG;protein_id=WP_206737947.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1591727 1592518 . - . ID=gene-IXO1104_RS07450;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS07450;old_locus_tag=IXO1104_07400 NZ_CP047492.1 Protein Homology CDS 1591727 1592518 . - 0 ID=cds-WP_178384316.1;Parent=gene-IXO1104_RS07450;Dbxref=Genbank:WP_178384316.1;Name=WP_178384316.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304316.1;locus_tag=IXO1104_RS07450;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_178384316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1592515 1593942 . - . ID=gene-IXO1104_RS07455;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IXO1104_RS07455;old_locus_tag=IXO1104_07405 NZ_CP047492.1 Protein Homology CDS 1592515 1593942 . - 0 ID=cds-WP_241243211.1;Parent=gene-IXO1104_RS07455;Dbxref=Genbank:WP_241243211.1;Name=WP_241243211.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008209983.1;locus_tag=IXO1104_RS07455;product=type VI secretion system baseplate subunit TssK;protein_id=WP_241243211.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1594001 1594609 . - . ID=gene-IXO1104_RS07460;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS07460;old_locus_tag=IXO1104_07410 NZ_CP047492.1 Protein Homology CDS 1594001 1594609 . - 0 ID=cds-WP_075240219.1;Parent=gene-IXO1104_RS07460;Dbxref=Genbank:WP_075240219.1;Name=WP_075240219.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302181.1;locus_tag=IXO1104_RS07460;product=type VI secretion system lipoprotein TssJ;protein_id=WP_075240219.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1594873 1595484 . + . ID=gene-IXO1104_RS07465;Name=IXO1104_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07465;old_locus_tag=IXO1104_07415 NZ_CP047492.1 Protein Homology CDS 1594873 1595484 . + 0 ID=cds-WP_230455557.1;Parent=gene-IXO1104_RS07465;Dbxref=Genbank:WP_230455557.1;Name=WP_230455557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812673.1;locus_tag=IXO1104_RS07465;product=hypothetical protein;protein_id=WP_230455557.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1595531 1596031 . + . ID=gene-IXO1104_RS07470;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=IXO1104_RS07470;old_locus_tag=IXO1104_07420 NZ_CP047492.1 Protein Homology CDS 1595531 1596031 . + 0 ID=cds-WP_003467601.1;Parent=gene-IXO1104_RS07470;Dbxref=Genbank:WP_003467601.1;Name=WP_003467601.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304314.1;locus_tag=IXO1104_RS07470;product=type VI secretion system contractile sheath small subunit;protein_id=WP_003467601.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1596035 1597531 . + . ID=gene-IXO1104_RS07475;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=IXO1104_RS07475;old_locus_tag=IXO1104_07425 NZ_CP047492.1 Protein Homology CDS 1596035 1597531 . + 0 ID=cds-WP_011259943.1;Parent=gene-IXO1104_RS07475;Dbxref=Genbank:WP_011259943.1;Name=WP_011259943.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467606.1;locus_tag=IXO1104_RS07475;product=type VI secretion system contractile sheath large subunit;protein_id=WP_011259943.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1597673 1598170 . + . ID=gene-IXO1104_RS07480;Name=IXO1104_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07480;old_locus_tag=IXO1104_07430 NZ_CP047492.1 Protein Homology CDS 1597673 1598170 . + 0 ID=cds-WP_003467612.1;Parent=gene-IXO1104_RS07480;Dbxref=Genbank:WP_003467612.1;Name=WP_003467612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006465355.1;locus_tag=IXO1104_RS07480;product=type VI secretion system tube protein Hcp;protein_id=WP_003467612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1598318 1598806 . + . ID=gene-IXO1104_RS07485;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=IXO1104_RS07485;old_locus_tag=IXO1104_07435 NZ_CP047492.1 Protein Homology CDS 1598318 1598806 . + 0 ID=cds-WP_011259942.1;Parent=gene-IXO1104_RS07485;Dbxref=Genbank:WP_011259942.1;Name=WP_011259942.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302186.1;locus_tag=IXO1104_RS07485;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011259942.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1598809 1600644 . + . ID=gene-IXO1104_RS07490;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=IXO1104_RS07490;old_locus_tag=IXO1104_07440 NZ_CP047492.1 Protein Homology CDS 1598809 1600644 . + 0 ID=cds-WP_014502420.1;Parent=gene-IXO1104_RS07490;Dbxref=Genbank:WP_014502420.1;Name=WP_014502420.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812662.1;locus_tag=IXO1104_RS07490;product=type VI secretion system baseplate subunit TssF;protein_id=WP_014502420.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1600608 1601699 . + . ID=gene-IXO1104_RS07495;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=IXO1104_RS07495;old_locus_tag=IXO1104_07445 NZ_CP047492.1 Protein Homology CDS 1600608 1601699 . + 0 ID=cds-WP_012445670.1;Parent=gene-IXO1104_RS07495;Dbxref=Genbank:WP_012445670.1;Name=WP_012445670.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302188.1;locus_tag=IXO1104_RS07495;product=type VI secretion system baseplate subunit TssG;protein_id=WP_012445670.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1601785 1604517 . + . ID=gene-IXO1104_RS07500;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=IXO1104_RS07500;old_locus_tag=IXO1104_07450 NZ_CP047492.1 Protein Homology CDS 1601785 1604517 . + 0 ID=cds-WP_075240732.1;Parent=gene-IXO1104_RS07500;Dbxref=Genbank:WP_075240732.1;Name=WP_075240732.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445669.1;locus_tag=IXO1104_RS07500;product=type VI secretion system ATPase TssH;protein_id=WP_075240732.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1604548 1604901 . + . ID=gene-IXO1104_RS07505;Name=IXO1104_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07505;old_locus_tag=IXO1104_07455 NZ_CP047492.1 Protein Homology CDS 1604548 1604901 . + 0 ID=cds-WP_011259938.1;Parent=gene-IXO1104_RS07505;Dbxref=Genbank:WP_011259938.1;Name=WP_011259938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303308.1;locus_tag=IXO1104_RS07505;product=hypothetical protein;protein_id=WP_011259938.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1604994 1607756 . + . ID=gene-IXO1104_RS07510;Name=IXO1104_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07510;old_locus_tag=IXO1104_07460 NZ_CP047492.1 Protein Homology CDS 1604994 1607756 . + 0 ID=cds-WP_263117887.1;Parent=gene-IXO1104_RS07510;Dbxref=Genbank:WP_263117887.1;Name=WP_263117887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503453.1;locus_tag=IXO1104_RS07510;product=type VI secretion system tip protein VgrG;protein_id=WP_263117887.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1607947 1608603 . + . ID=gene-IXO1104_RS07515;Name=IXO1104_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07515;old_locus_tag=IXO1104_07465 NZ_CP047492.1 Protein Homology CDS 1607947 1608603 . + 0 ID=cds-WP_263117889.1;Parent=gene-IXO1104_RS07515;Dbxref=Genbank:WP_263117889.1;Name=WP_263117889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.2;locus_tag=IXO1104_RS07515;product=DUF4123 domain-containing protein;protein_id=WP_263117889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1608622 1611489 . + . ID=gene-IXO1104_RS07520;Name=IXO1104_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07520;old_locus_tag=IXO1104_07470 NZ_CP047492.1 Protein Homology CDS 1608622 1611489 . + 0 ID=cds-WP_263117890.1;Parent=gene-IXO1104_RS07520;Dbxref=Genbank:WP_263117890.1;Name=WP_263117890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259933.1;locus_tag=IXO1104_RS07520;product=hypothetical protein;protein_id=WP_263117890.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1611498 1612514 . + . ID=gene-IXO1104_RS07525;Name=IXO1104_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07525;old_locus_tag=IXO1104_07475 NZ_CP047492.1 Protein Homology CDS 1611498 1612514 . + 0 ID=cds-WP_027704271.1;Parent=gene-IXO1104_RS07525;Dbxref=Genbank:WP_027704271.1;Name=WP_027704271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1104_RS07525;product=hypothetical protein;protein_id=WP_027704271.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1612516 1615008 . + . ID=gene-IXO1104_RS07530;Name=IXO1104_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07530;old_locus_tag=IXO1104_07480 NZ_CP047492.1 Protein Homology CDS 1612516 1615008 . + 0 ID=cds-WP_263117893.1;Parent=gene-IXO1104_RS07530;Dbxref=Genbank:WP_263117893.1;Name=WP_263117893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445666.1;locus_tag=IXO1104_RS07530;product=hypothetical protein;protein_id=WP_263117893.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1615017 1616048 . + . ID=gene-IXO1104_RS07535;Name=IXO1104_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07535;old_locus_tag=IXO1104_07485 NZ_CP047492.1 Protein Homology CDS 1615017 1616048 . + 0 ID=cds-WP_041182737.1;Parent=gene-IXO1104_RS07535;Dbxref=Genbank:WP_041182737.1;Name=WP_041182737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1104_RS07535;product=hypothetical protein;protein_id=WP_041182737.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1616340 1618508 . + . ID=gene-IXO1104_RS07540;Name=IXO1104_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07540;old_locus_tag=IXO1104_07490 NZ_CP047492.1 GeneMarkS-2+ CDS 1616340 1618508 . + 0 ID=cds-WP_263117895.1;Parent=gene-IXO1104_RS07540;Dbxref=Genbank:WP_263117895.1;Name=WP_263117895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07540;product=hypothetical protein;protein_id=WP_263117895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1618523 1619548 . + . ID=gene-IXO1104_RS07545;Name=IXO1104_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07545;old_locus_tag=IXO1104_07495 NZ_CP047492.1 Protein Homology CDS 1618523 1619548 . + 0 ID=cds-WP_075240645.1;Parent=gene-IXO1104_RS07545;Dbxref=Genbank:WP_075240645.1;Name=WP_075240645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409192.1;locus_tag=IXO1104_RS07545;product=hypothetical protein;protein_id=WP_075240645.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1619813 1620004 . - . ID=gene-IXO1104_RS07550;Name=IXO1104_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07550 NZ_CP047492.1 GeneMarkS-2+ CDS 1619813 1620004 . - 0 ID=cds-WP_164994086.1;Parent=gene-IXO1104_RS07550;Dbxref=Genbank:WP_164994086.1;Name=WP_164994086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07550;product=hypothetical protein;protein_id=WP_164994086.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1619942 1620466 . + . ID=gene-IXO1104_RS07555;Name=IXO1104_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07555;old_locus_tag=IXO1104_07500;partial=true;pseudo=true;start_range=.,1619942 NZ_CP047492.1 Protein Homology CDS 1619942 1620466 . + 0 ID=cds-IXO1104_RS07555;Parent=gene-IXO1104_RS07555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1104_RS07555;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1619942;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1620988 1621515 . - . ID=gene-IXO1104_RS07560;Name=IXO1104_RS07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07560;old_locus_tag=IXO1104_07505;partial=true;pseudo=true;start_range=.,1620988 NZ_CP047492.1 Protein Homology CDS 1620988 1621515 . - 0 ID=cds-IXO1104_RS07560;Parent=gene-IXO1104_RS07560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503453.1;locus_tag=IXO1104_RS07560;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,1620988;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1621672 1621796 . + . ID=gene-IXO1104_RS07565;Name=IXO1104_RS07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07565;old_locus_tag=IXO1104_07510;partial=true;pseudo=true;start_range=.,1621672 NZ_CP047492.1 Protein Homology CDS 1621672 1621796 . + 0 ID=cds-IXO1104_RS07565;Parent=gene-IXO1104_RS07565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611589.1;locus_tag=IXO1104_RS07565;partial=true;product=transposase;pseudo=true;start_range=.,1621672;transl_table=11 NZ_CP047492.1 RefSeq gene 1621858 1621934 . + . ID=gene-IXO1104_RS07570;Name=IXO1104_RS07570;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07570;old_locus_tag=IXO1104_07515 NZ_CP047492.1 cmsearch ncRNA 1621858 1621934 . + . ID=rna-IXO1104_RS07570;Parent=gene-IXO1104_RS07570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07570;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1621858 1621934 . + . ID=exon-IXO1104_RS07570-1;Parent=rna-IXO1104_RS07570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07570;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1622244 1622507 . + . ID=gene-IXO1104_RS07575;Name=IXO1104_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07575;old_locus_tag=IXO1104_07520 NZ_CP047492.1 Protein Homology CDS 1622244 1622507 . + 0 ID=cds-WP_011259930.1;Parent=gene-IXO1104_RS07575;Dbxref=Genbank:WP_011259930.1;Name=WP_011259930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479855.1;locus_tag=IXO1104_RS07575;product=hypothetical protein;protein_id=WP_011259930.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1622514 1622822 . + . ID=gene-IXO1104_RS07580;Name=IXO1104_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07580;old_locus_tag=IXO1104_07525 NZ_CP047492.1 Protein Homology CDS 1622514 1622822 . + 0 ID=cds-WP_075240669.1;Parent=gene-IXO1104_RS07580;Dbxref=Genbank:WP_075240669.1;Name=WP_075240669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303839.1;locus_tag=IXO1104_RS07580;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_075240669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1622856 1624268 . - . ID=gene-IXO1104_RS07585;Name=IXO1104_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07585 NZ_CP047492.1 Protein Homology CDS 1622856 1624268 . - 0 ID=cds-WP_075240668.1;Parent=gene-IXO1104_RS07585;Dbxref=Genbank:WP_075240668.1;Name=WP_075240668.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=IXO1104_RS07585;product=restriction endonuclease subunit S;protein_id=WP_075240668.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1624258 1625802 . - . ID=gene-IXO1104_RS07590;Name=IXO1104_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07590;old_locus_tag=IXO1104_07540 NZ_CP047492.1 Protein Homology CDS 1624258 1625802 . - 0 ID=cds-WP_075240667.1;Parent=gene-IXO1104_RS07590;Dbxref=Genbank:WP_075240667.1;Name=WP_075240667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502302.1;locus_tag=IXO1104_RS07590;product=N-6 DNA methylase;protein_id=WP_075240667.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1625849 1626847 . - . ID=gene-IXO1104_RS07595;Name=IXO1104_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07595;old_locus_tag=IXO1104_07545 NZ_CP047492.1 Protein Homology CDS 1625849 1626847 . - 0 ID=cds-WP_075240666.1;Parent=gene-IXO1104_RS07595;Dbxref=Genbank:WP_075240666.1;Name=WP_075240666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409184.1;locus_tag=IXO1104_RS07595;product=Abi family protein;protein_id=WP_075240666.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1626987 1630460 . - . ID=gene-IXO1104_RS07600;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=IXO1104_RS07600;old_locus_tag=IXO1104_07550 NZ_CP047492.1 Protein Homology CDS 1626987 1630460 . - 0 ID=cds-WP_075240665.1;Parent=gene-IXO1104_RS07600;Dbxref=Genbank:WP_075240665.1;Name=WP_075240665.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930478.1;locus_tag=IXO1104_RS07600;product=type I restriction-modification system endonuclease;protein_id=WP_075240665.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1630770 1631033 . + . ID=gene-IXO1104_RS07605;Name=IXO1104_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07605;old_locus_tag=IXO1104_07555 NZ_CP047492.1 Protein Homology CDS 1630770 1631033 . + 0 ID=cds-WP_075240664.1;Parent=gene-IXO1104_RS07605;Dbxref=Genbank:WP_075240664.1;Name=WP_075240664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050743.1;locus_tag=IXO1104_RS07605;product=hypothetical protein;protein_id=WP_075240664.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1631040 1631348 . + . ID=gene-IXO1104_RS07610;Name=IXO1104_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07610;old_locus_tag=IXO1104_07560 NZ_CP047492.1 Protein Homology CDS 1631040 1631348 . + 0 ID=cds-WP_075240663.1;Parent=gene-IXO1104_RS07610;Dbxref=Genbank:WP_075240663.1;Name=WP_075240663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303839.1;locus_tag=IXO1104_RS07610;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_075240663.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1631427 1633808 . + . ID=gene-IXO1104_RS07615;Name=IXO1104_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07615;old_locus_tag=IXO1104_07565 NZ_CP047492.1 Protein Homology CDS 1631427 1633808 . + 0 ID=cds-WP_075240002.1;Parent=gene-IXO1104_RS07615;Dbxref=Genbank:WP_075240002.1;Name=WP_075240002.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920538.1;locus_tag=IXO1104_RS07615;product=DEAD/DEAH box helicase family protein;protein_id=WP_075240002.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1633872 1634507 . + . ID=gene-IXO1104_RS07620;Name=IXO1104_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07620;old_locus_tag=IXO1104_07570 NZ_CP047492.1 Protein Homology CDS 1633872 1634507 . + 0 ID=cds-WP_075240662.1;Parent=gene-IXO1104_RS07620;Dbxref=Genbank:WP_075240662.1;Name=WP_075240662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303840.1;locus_tag=IXO1104_RS07620;product=helix-turn-helix domain-containing protein;protein_id=WP_075240662.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1634543 1635229 . + . ID=gene-IXO1104_RS07625;Name=IXO1104_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07625;old_locus_tag=IXO1104_07575 NZ_CP047492.1 Protein Homology CDS 1634543 1635229 . + 0 ID=cds-WP_241846842.1;Parent=gene-IXO1104_RS07625;Dbxref=Genbank:WP_241846842.1;Name=WP_241846842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996136.1;locus_tag=IXO1104_RS07625;product=hypothetical protein;protein_id=WP_241846842.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1635234 1636703 . + . ID=gene-IXO1104_RS07630;Name=IXO1104_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07630;old_locus_tag=IXO1104_07580 NZ_CP047492.1 Protein Homology CDS 1635234 1636703 . + 0 ID=cds-WP_075240660.1;Parent=gene-IXO1104_RS07630;Dbxref=Genbank:WP_075240660.1;Name=WP_075240660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502311.1;locus_tag=IXO1104_RS07630;product=type I restriction-modification system subunit M;protein_id=WP_075240660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1636700 1638241 . + . ID=gene-IXO1104_RS07635;Name=IXO1104_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07635;old_locus_tag=IXO1104_07585 NZ_CP047492.1 Protein Homology CDS 1636700 1638241 . + 0 ID=cds-WP_075240659.1;Parent=gene-IXO1104_RS07635;Dbxref=Genbank:WP_075240659.1;Name=WP_075240659.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=IXO1104_RS07635;product=restriction endonuclease subunit S;protein_id=WP_075240659.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1638232 1639188 . - . ID=gene-IXO1104_RS07640;Name=IXO1104_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07640;old_locus_tag=IXO1104_07590 NZ_CP047492.1 Protein Homology CDS 1638232 1639188 . - 0 ID=cds-WP_041182545.1-3;Parent=gene-IXO1104_RS07640;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS07640;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1639318 1640082 . + . ID=gene-IXO1104_RS07645;Name=IXO1104_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07645;old_locus_tag=IXO1104_07595 NZ_CP047492.1 GeneMarkS-2+ CDS 1639318 1640082 . + 0 ID=cds-WP_256724557.1;Parent=gene-IXO1104_RS07645;Dbxref=Genbank:WP_256724557.1;Name=WP_256724557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS07645;product=hypothetical protein;protein_id=WP_256724557.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1640471 1640737 . + . ID=gene-IXO1104_RS07650;Name=IXO1104_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07650;old_locus_tag=IXO1104_07605 NZ_CP047492.1 Protein Homology CDS 1640471 1640737 . + 0 ID=cds-WP_075240632.1;Parent=gene-IXO1104_RS07650;Dbxref=Genbank:WP_075240632.1;Name=WP_075240632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502313.1;locus_tag=IXO1104_RS07650;product=hypothetical protein;protein_id=WP_075240632.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1640986 1642560 . - . ID=gene-IXO1104_RS07655;Name=IXO1104_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07655;old_locus_tag=IXO1104_07610 NZ_CP047492.1 Protein Homology CDS 1640986 1642560 . - 0 ID=cds-WP_075240008.1;Parent=gene-IXO1104_RS07655;Dbxref=Genbank:WP_075240008.1;Name=WP_075240008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161779.1;locus_tag=IXO1104_RS07655;product=serine/threonine-protein kinase;protein_id=WP_075240008.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1642969 1643718 . + . ID=gene-IXO1104_RS07660;Name=IXO1104_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07660;old_locus_tag=IXO1104_07615 NZ_CP047492.1 Protein Homology CDS 1642969 1643718 . + 0 ID=cds-WP_027704160.1;Parent=gene-IXO1104_RS07660;Dbxref=Genbank:WP_027704160.1;Name=WP_027704160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157923.1;locus_tag=IXO1104_RS07660;product=hypothetical protein;protein_id=WP_027704160.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1644074 1644829 . + . ID=gene-IXO1104_RS07665;Name=IXO1104_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07665;old_locus_tag=IXO1104_07620 NZ_CP047492.1 Protein Homology CDS 1644074 1644829 . + 0 ID=cds-WP_027704159.1;Parent=gene-IXO1104_RS07665;Dbxref=Genbank:WP_027704159.1;Name=WP_027704159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157921.1;locus_tag=IXO1104_RS07665;product=hypothetical protein;protein_id=WP_027704159.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1644890 1645519 . - . ID=gene-IXO1104_RS07670;Name=IXO1104_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07670;old_locus_tag=IXO1104_07625 NZ_CP047492.1 Protein Homology CDS 1644890 1645519 . - 0 ID=cds-WP_011409168.1;Parent=gene-IXO1104_RS07670;Dbxref=Genbank:WP_011409168.1;Name=WP_011409168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903342.1;locus_tag=IXO1104_RS07670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011409168.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1645734 1646513 . + . ID=gene-IXO1104_RS07675;Name=IXO1104_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07675;old_locus_tag=IXO1104_07630 NZ_CP047492.1 Protein Homology CDS 1645734 1646513 . + 0 ID=cds-WP_011409167.1;Parent=gene-IXO1104_RS07675;Dbxref=Genbank:WP_011409167.1;Name=WP_011409167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490632.1;locus_tag=IXO1104_RS07675;product=histidine phosphatase family protein;protein_id=WP_011409167.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1646513 1647382 . + . ID=gene-IXO1104_RS07680;Name=IXO1104_RS07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07680;old_locus_tag=IXO1104_07635;pseudo=true NZ_CP047492.1 Protein Homology CDS 1646513 1647382 . + 0 ID=cds-IXO1104_RS07680;Parent=gene-IXO1104_RS07680;Note=internal stop;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849374.1;locus_tag=IXO1104_RS07680;product=NAD(P)H-hydrate dehydratase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1647681 1647833 . + . ID=gene-IXO1104_RS07685;Name=IXO1104_RS07685;end_range=1647833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07685;old_locus_tag=IXO1104_07640;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1647681 1647833 . + 0 ID=cds-IXO1104_RS07685;Parent=gene-IXO1104_RS07685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1647833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157900.1;locus_tag=IXO1104_RS07685;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1648028 1648453 . - . ID=gene-IXO1104_RS07690;Name=IXO1104_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07690;old_locus_tag=IXO1104_07645 NZ_CP047492.1 Protein Homology CDS 1648028 1648453 . - 0 ID=cds-WP_011409165.1;Parent=gene-IXO1104_RS07690;Dbxref=Genbank:WP_011409165.1;Name=WP_011409165.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157899.1;locus_tag=IXO1104_RS07690;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_011409165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1648463 1648684 . - . ID=gene-IXO1104_RS07695;Name=IXO1104_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07695;old_locus_tag=IXO1104_07650 NZ_CP047492.1 Protein Homology CDS 1648463 1648684 . - 0 ID=cds-WP_011259911.1;Parent=gene-IXO1104_RS07695;Dbxref=Genbank:WP_011259911.1;Name=WP_011259911.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302153.1;locus_tag=IXO1104_RS07695;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_011259911.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1648834 1649439 . + . ID=gene-IXO1104_RS07700;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=IXO1104_RS07700;old_locus_tag=IXO1104_07655 NZ_CP047492.1 Protein Homology CDS 1648834 1649439 . + 0 ID=cds-WP_011259910.1;Parent=gene-IXO1104_RS07700;Dbxref=Genbank:WP_011259910.1;Name=WP_011259910.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971824.1;locus_tag=IXO1104_RS07700;product=transcriptional repressor LexA;protein_id=WP_011259910.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1649441 1650091 . + . ID=gene-IXO1104_RS07705;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=IXO1104_RS07705;old_locus_tag=IXO1104_07660 NZ_CP047492.1 Protein Homology CDS 1649441 1650091 . + 0 ID=cds-WP_011259909.1;Parent=gene-IXO1104_RS07705;Dbxref=Genbank:WP_011259909.1;Name=WP_011259909.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116014.1;locus_tag=IXO1104_RS07705;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_011259909.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1650101 1651519 . + . ID=gene-IXO1104_RS07710;Name=IXO1104_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07710;old_locus_tag=IXO1104_07665 NZ_CP047492.1 Protein Homology CDS 1650101 1651519 . + 0 ID=cds-WP_011259908.1;Parent=gene-IXO1104_RS07710;Dbxref=Genbank:WP_011259908.1;Name=WP_011259908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502328.1;locus_tag=IXO1104_RS07710;product=DNA polymerase Y family protein;protein_id=WP_011259908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1651532 1651714 . + . ID=gene-IXO1104_RS07715;Name=IXO1104_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07715 NZ_CP047492.1 Protein Homology CDS 1651532 1651714 . + 0 ID=cds-WP_075239010.1;Parent=gene-IXO1104_RS07715;Dbxref=Genbank:WP_075239010.1;Name=WP_075239010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157895.1;locus_tag=IXO1104_RS07715;product=hypothetical protein;protein_id=WP_075239010.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1651701 1654952 . + . ID=gene-IXO1104_RS07720;Name=IXO1104_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07720;old_locus_tag=IXO1104_07670 NZ_CP047492.1 Protein Homology CDS 1651701 1654952 . + 0 ID=cds-WP_012445640.1;Parent=gene-IXO1104_RS07720;Dbxref=Genbank:WP_012445640.1;Name=WP_012445640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445640.1;locus_tag=IXO1104_RS07720;product=error-prone DNA polymerase;protein_id=WP_012445640.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1655263 1656081 . + . ID=gene-IXO1104_RS07725;Name=IXO1104_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07725;old_locus_tag=IXO1104_07675 NZ_CP047492.1 Protein Homology CDS 1655263 1656081 . + 0 ID=cds-WP_027704156.1;Parent=gene-IXO1104_RS07725;Dbxref=Genbank:WP_027704156.1;Name=WP_027704156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814392.1;locus_tag=IXO1104_RS07725;product=HDOD domain-containing protein;protein_id=WP_027704156.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1656194 1657591 . - . ID=gene-IXO1104_RS07730;Name=IXO1104_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07730;old_locus_tag=IXO1104_07680 NZ_CP047492.1 Protein Homology CDS 1656194 1657591 . - 0 ID=cds-WP_027704155.1;Parent=gene-IXO1104_RS07730;Dbxref=Genbank:WP_027704155.1;Name=WP_027704155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489555.1;locus_tag=IXO1104_RS07730;product=endoproteinase ArgC;protein_id=WP_027704155.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1658020 1659990 . + . ID=gene-IXO1104_RS07735;Name=IXO1104_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07735;old_locus_tag=IXO1104_07685 NZ_CP047492.1 Protein Homology CDS 1658020 1659990 . + 0 ID=cds-WP_011259903.1;Parent=gene-IXO1104_RS07735;Dbxref=Genbank:WP_011259903.1;Name=WP_011259903.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346708.1;locus_tag=IXO1104_RS07735;product=oligopeptide transporter%2C OPT family;protein_id=WP_011259903.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1660425 1660501 . + . ID=gene-IXO1104_RS07740;Name=IXO1104_RS07740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07740;old_locus_tag=IXO1104_07690 NZ_CP047492.1 cmsearch ncRNA 1660425 1660501 . + . ID=rna-IXO1104_RS07740;Parent=gene-IXO1104_RS07740;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07740;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1660425 1660501 . + . ID=exon-IXO1104_RS07740-1;Parent=rna-IXO1104_RS07740;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07740;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1661115 1661960 . + . ID=gene-IXO1104_RS07745;Name=IXO1104_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07745;old_locus_tag=IXO1104_07695 NZ_CP047492.1 Protein Homology CDS 1661115 1661960 . + 0 ID=cds-WP_027704154.1;Parent=gene-IXO1104_RS07745;Dbxref=Genbank:WP_027704154.1;Name=WP_027704154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158565.1;locus_tag=IXO1104_RS07745;product=transporter;protein_id=WP_027704154.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1662022 1662093 . + . ID=gene-IXO1104_RS07750;Name=IXO1104_RS07750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07750;old_locus_tag=IXO1104_07700 NZ_CP047492.1 cmsearch ncRNA 1662022 1662093 . + . ID=rna-IXO1104_RS07750;Parent=gene-IXO1104_RS07750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07750;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1662022 1662093 . + . ID=exon-IXO1104_RS07750-1;Parent=rna-IXO1104_RS07750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07750;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1662227 1664347 . + . ID=gene-IXO1104_RS07755;Name=IXO1104_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07755;old_locus_tag=IXO1104_07705 NZ_CP047492.1 Protein Homology CDS 1662227 1664347 . + 0 ID=cds-WP_027704153.1;Parent=gene-IXO1104_RS07755;Dbxref=Genbank:WP_027704153.1;Name=WP_027704153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169463.1;locus_tag=IXO1104_RS07755;product=S9 family peptidase;protein_id=WP_027704153.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1664421 1665798 . - . ID=gene-IXO1104_RS07760;Name=IXO1104_RS07760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07760;old_locus_tag=IXO1104_07710;pseudo=true NZ_CP047492.1 Protein Homology CDS 1664421 1665798 . - 0 ID=cds-IXO1104_RS07760;Parent=gene-IXO1104_RS07760;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS07760;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1665880 1666292 . + . ID=gene-IXO1104_RS07765;Name=IXO1104_RS07765;end_range=1666292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07765;old_locus_tag=IXO1104_07715;partial=true;pseudo=true;start_range=.,1665880 NZ_CP047492.1 Protein Homology CDS 1665880 1666292 . + 0 ID=cds-IXO1104_RS07765;Parent=gene-IXO1104_RS07765;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1666292,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1104_RS07765;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,1665880;transl_table=11 NZ_CP047492.1 RefSeq gene 1666462 1666923 . + . ID=gene-IXO1104_RS07770;Name=IXO1104_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07770;old_locus_tag=IXO1104_07720 NZ_CP047492.1 Protein Homology CDS 1666462 1666923 . + 0 ID=cds-WP_011409154.1;Parent=gene-IXO1104_RS07770;Dbxref=Genbank:WP_011409154.1;Name=WP_011409154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157885.1;locus_tag=IXO1104_RS07770;product=hypothetical protein;protein_id=WP_011409154.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1667055 1667780 . + . ID=gene-IXO1104_RS07775;Name=IXO1104_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07775;old_locus_tag=IXO1104_07725 NZ_CP047492.1 Protein Homology CDS 1667055 1667780 . + 0 ID=cds-WP_011259895.1;Parent=gene-IXO1104_RS07775;Dbxref=Genbank:WP_011259895.1;Name=WP_011259895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371630.1;locus_tag=IXO1104_RS07775;product=AraC family transcriptional regulator;protein_id=WP_011259895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1668011 1668087 . + . ID=gene-IXO1104_RS07780;Name=IXO1104_RS07780;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07780;old_locus_tag=IXO1104_07730 NZ_CP047492.1 cmsearch ncRNA 1668011 1668087 . + . ID=rna-IXO1104_RS07780;Parent=gene-IXO1104_RS07780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07780;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1668011 1668087 . + . ID=exon-IXO1104_RS07780-1;Parent=rna-IXO1104_RS07780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07780;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1668613 1670754 . + . ID=gene-IXO1104_RS07785;Name=IXO1104_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07785;old_locus_tag=IXO1104_07735 NZ_CP047492.1 Protein Homology CDS 1668613 1670754 . + 0 ID=cds-WP_011259894.1;Parent=gene-IXO1104_RS07785;Dbxref=Genbank:WP_011259894.1;Name=WP_011259894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259894.1;locus_tag=IXO1104_RS07785;product=hypothetical protein;protein_id=WP_011259894.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1670871 1673003 . + . ID=gene-IXO1104_RS07790;Name=IXO1104_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07790;old_locus_tag=IXO1104_07740 NZ_CP047492.1 Protein Homology CDS 1670871 1673003 . + 0 ID=cds-WP_069964803.1;Parent=gene-IXO1104_RS07790;Dbxref=Genbank:WP_069964803.1;Name=WP_069964803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259894.1;locus_tag=IXO1104_RS07790;product=outer protein P;protein_id=WP_069964803.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1673231 1674469 . - . ID=gene-IXO1104_RS07795;Name=IXO1104_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07795;old_locus_tag=IXO1104_07745 NZ_CP047492.1 Protein Homology CDS 1673231 1674469 . - 0 ID=cds-WP_027703311.1;Parent=gene-IXO1104_RS07795;Dbxref=Genbank:WP_027703311.1;Name=WP_027703311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154699.1;locus_tag=IXO1104_RS07795;product=hypothetical protein;protein_id=WP_027703311.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1675295 1677400 . - . ID=gene-IXO1104_RS07800;Name=IXO1104_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07800;old_locus_tag=IXO1104_07750 NZ_CP047492.1 Protein Homology CDS 1675295 1677400 . - 0 ID=cds-WP_011259891.1;Parent=gene-IXO1104_RS07800;Dbxref=Genbank:WP_011259891.1;Name=WP_011259891.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154698.1;locus_tag=IXO1104_RS07800;product=catalase;protein_id=WP_011259891.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1677618 1677906 . - . ID=gene-IXO1104_RS07805;Name=IXO1104_RS07805;end_range=1677906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07805;old_locus_tag=IXO1104_07755;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1677618 1677906 . - 0 ID=cds-IXO1104_RS07805;Parent=gene-IXO1104_RS07805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1677906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050780.1;locus_tag=IXO1104_RS07805;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1677926 1678366 . - . ID=gene-IXO1104_RS07810;Name=IXO1104_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07810;old_locus_tag=IXO1104_07760 NZ_CP047492.1 Protein Homology CDS 1677926 1678366 . - 0 ID=cds-WP_075239931.1;Parent=gene-IXO1104_RS07810;Dbxref=Genbank:WP_075239931.1;Name=WP_075239931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023304.2;locus_tag=IXO1104_RS07810;product=DUF3396 domain-containing protein;protein_id=WP_075239931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1678427 1679428 . + . ID=gene-IXO1104_RS07815;Name=IXO1104_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07815;old_locus_tag=IXO1104_07765 NZ_CP047492.1 Protein Homology CDS 1678427 1679428 . + 0 ID=cds-WP_133264714.1;Parent=gene-IXO1104_RS07815;Dbxref=Genbank:WP_133264714.1;Name=WP_133264714.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445627.1;locus_tag=IXO1104_RS07815;product=IS630 family transposase;protein_id=WP_133264714.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1679566 1682406 . + . ID=gene-IXO1104_RS07820;Name=IXO1104_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07820;old_locus_tag=IXO1104_07770 NZ_CP047492.1 Protein Homology CDS 1679566 1682406 . + 0 ID=cds-WP_033013623.1;Parent=gene-IXO1104_RS07820;Dbxref=Genbank:WP_033013623.1;Name=WP_033013623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159178.1;locus_tag=IXO1104_RS07820;product=DUF2339 domain-containing protein;protein_id=WP_033013623.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1682403 1683761 . + . ID=gene-IXO1104_RS07825;Name=IXO1104_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07825;old_locus_tag=IXO1104_07775 NZ_CP047492.1 Protein Homology CDS 1682403 1683761 . + 0 ID=cds-WP_011409146.1;Parent=gene-IXO1104_RS07825;Dbxref=Genbank:WP_011409146.1;Name=WP_011409146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155483.1;locus_tag=IXO1104_RS07825;product=DUF3999 domain-containing protein;protein_id=WP_011409146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1684095 1685270 . + . ID=gene-IXO1104_RS07830;Name=IXO1104_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07830;old_locus_tag=IXO1104_07780 NZ_CP047492.1 Protein Homology CDS 1684095 1685270 . + 0 ID=cds-WP_027704219.1;Parent=gene-IXO1104_RS07830;Dbxref=Genbank:WP_027704219.1;Name=WP_027704219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445624.1;locus_tag=IXO1104_RS07830;product=phosphoglycerate kinase;protein_id=WP_027704219.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1685267 1685911 . + . ID=gene-IXO1104_RS07835;Name=IXO1104_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07835;old_locus_tag=IXO1104_07785 NZ_CP047492.1 Protein Homology CDS 1685267 1685911 . + 0 ID=cds-WP_011259886.1;Parent=gene-IXO1104_RS07835;Dbxref=Genbank:WP_011259886.1;Name=WP_011259886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300871.1;locus_tag=IXO1104_RS07835;product=HAD family hydrolase;protein_id=WP_011259886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1686168 1687634 . + . ID=gene-IXO1104_RS07840;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=IXO1104_RS07840;old_locus_tag=IXO1104_07790 NZ_CP047492.1 Protein Homology CDS 1686168 1687634 . + 0 ID=cds-WP_011409145.1;Parent=gene-IXO1104_RS07840;Dbxref=Genbank:WP_011409145.1;Name=WP_011409145.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487265.1;locus_tag=IXO1104_RS07840;product=pyruvate kinase;protein_id=WP_011409145.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1688231 1689235 . + . ID=gene-IXO1104_RS07845;Name=IXO1104_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07845;old_locus_tag=IXO1104_07795 NZ_CP047492.1 Protein Homology CDS 1688231 1689235 . + 0 ID=cds-WP_012445622.1;Parent=gene-IXO1104_RS07845;Dbxref=Genbank:WP_012445622.1;Name=WP_012445622.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437525.1;locus_tag=IXO1104_RS07845;product=fructose-bisphosphate aldolase class I;protein_id=WP_012445622.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1689437 1689976 . - . ID=gene-IXO1104_RS07850;Name=IXO1104_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07850;old_locus_tag=IXO1104_07800 NZ_CP047492.1 Protein Homology CDS 1689437 1689976 . - 0 ID=cds-WP_012445621.1;Parent=gene-IXO1104_RS07850;Dbxref=Genbank:WP_012445621.1;Name=WP_012445621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300868.1;locus_tag=IXO1104_RS07850;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_012445621.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1690172 1690678 . - . ID=gene-IXO1104_RS07855;Name=IXO1104_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07855;old_locus_tag=IXO1104_07805 NZ_CP047492.1 Protein Homology CDS 1690172 1690678 . - 0 ID=cds-WP_027704220.1;Parent=gene-IXO1104_RS07855;Dbxref=Genbank:WP_027704220.1;Name=WP_027704220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155478.1;locus_tag=IXO1104_RS07855;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_027704220.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1690994 1691953 . - . ID=gene-IXO1104_RS07860;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=IXO1104_RS07860;old_locus_tag=IXO1104_07810 NZ_CP047492.1 Protein Homology CDS 1690994 1691953 . - 0 ID=cds-WP_011259881.1;Parent=gene-IXO1104_RS07860;Dbxref=Genbank:WP_011259881.1;Name=WP_011259881.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660021.1;locus_tag=IXO1104_RS07860;product=cysteine synthase A;protein_id=WP_011259881.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1691970 1693175 . - . ID=gene-IXO1104_RS07865;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=IXO1104_RS07865;old_locus_tag=IXO1104_07815 NZ_CP047492.1 Protein Homology CDS 1691970 1693175 . - 0 ID=cds-WP_075240596.1;Parent=gene-IXO1104_RS07865;Dbxref=Genbank:WP_075240596.1;Name=WP_075240596.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922380.1;locus_tag=IXO1104_RS07865;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_075240596.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1693343 1694326 . + . ID=gene-IXO1104_RS07870;Name=IXO1104_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07870;old_locus_tag=IXO1104_07820 NZ_CP047492.1 Protein Homology CDS 1693343 1694326 . + 0 ID=cds-WP_044756573.1;Parent=gene-IXO1104_RS07870;Dbxref=Genbank:WP_044756573.1;Name=WP_044756573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477207.1;locus_tag=IXO1104_RS07870;product=LysR family transcriptional regulator;protein_id=WP_044756573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1694337 1694618 . + . ID=gene-IXO1104_RS07875;Name=IXO1104_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07875;old_locus_tag=IXO1104_07825 NZ_CP047492.1 Protein Homology CDS 1694337 1694618 . + 0 ID=cds-WP_075240597.1;Parent=gene-IXO1104_RS07875;Dbxref=Genbank:WP_075240597.1;Name=WP_075240597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850560.1;locus_tag=IXO1104_RS07875;product=hypothetical protein;protein_id=WP_075240597.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1694634 1694708 . - . ID=gene-IXO1104_RS07880;Name=IXO1104_RS07880;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07880;old_locus_tag=IXO1104_07830 NZ_CP047492.1 cmsearch ncRNA 1694634 1694708 . - . ID=rna-IXO1104_RS07880;Parent=gene-IXO1104_RS07880;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07880;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1694634 1694708 . - . ID=exon-IXO1104_RS07880-1;Parent=rna-IXO1104_RS07880;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07880;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1694958 1695034 . + . ID=gene-IXO1104_RS07885;Name=IXO1104_RS07885;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07885;old_locus_tag=IXO1104_07835 NZ_CP047492.1 cmsearch ncRNA 1694958 1695034 . + . ID=rna-IXO1104_RS07885;Parent=gene-IXO1104_RS07885;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07885;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1694958 1695034 . + . ID=exon-IXO1104_RS07885-1;Parent=rna-IXO1104_RS07885;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07885;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1695511 1695584 . - . ID=gene-IXO1104_RS07890;Name=IXO1104_RS07890;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07890;old_locus_tag=IXO1104_07840 NZ_CP047492.1 cmsearch ncRNA 1695511 1695584 . - . ID=rna-IXO1104_RS07890;Parent=gene-IXO1104_RS07890;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07890;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1695511 1695584 . - . ID=exon-IXO1104_RS07890-1;Parent=rna-IXO1104_RS07890;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07890;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1695688 1696884 . - . ID=gene-IXO1104_RS07895;Name=IXO1104_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07895;old_locus_tag=IXO1104_07845 NZ_CP047492.1 Protein Homology CDS 1695688 1696884 . - 0 ID=cds-WP_012445617.1;Parent=gene-IXO1104_RS07895;Dbxref=Genbank:WP_012445617.1;Name=WP_012445617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155473.1;locus_tag=IXO1104_RS07895;product=GAF domain-containing sensor histidine kinase;protein_id=WP_012445617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1697207 1697644 . + . ID=gene-IXO1104_RS07900;Name=IXO1104_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07900;old_locus_tag=IXO1104_07850 NZ_CP047492.1 Protein Homology CDS 1697207 1697644 . + 0 ID=cds-WP_012445616.1;Parent=gene-IXO1104_RS07900;Dbxref=Genbank:WP_012445616.1;Name=WP_012445616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850457.1;locus_tag=IXO1104_RS07900;product=DUF2946 family protein;protein_id=WP_012445616.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1697839 1699842 . + . ID=gene-IXO1104_RS07905;Name=IXO1104_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07905;old_locus_tag=IXO1104_07855 NZ_CP047492.1 Protein Homology CDS 1697839 1699842 . + 0 ID=cds-WP_041182223.1;Parent=gene-IXO1104_RS07905;Dbxref=Genbank:WP_041182223.1;Name=WP_041182223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155471.1;locus_tag=IXO1104_RS07905;product=TonB-dependent receptor;protein_id=WP_041182223.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1699842 1701434 . + . ID=gene-IXO1104_RS07910;Name=IXO1104_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07910;old_locus_tag=IXO1104_07860 NZ_CP047492.1 Protein Homology CDS 1699842 1701434 . + 0 ID=cds-WP_012445614.1;Parent=gene-IXO1104_RS07910;Dbxref=Genbank:WP_012445614.1;Name=WP_012445614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114669.1;locus_tag=IXO1104_RS07910;product=PepSY domain-containing protein;protein_id=WP_012445614.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1701570 1702295 . - . ID=gene-IXO1104_RS07915;Name=IXO1104_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07915;old_locus_tag=IXO1104_07865 NZ_CP047492.1 Protein Homology CDS 1701570 1702295 . - 0 ID=cds-WP_075240494.1;Parent=gene-IXO1104_RS07915;Dbxref=Genbank:WP_075240494.1;Name=WP_075240494.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038282.1;locus_tag=IXO1104_RS07915;product=phosphoadenylyl-sulfate reductase;protein_id=WP_075240494.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1702292 1703998 . - . ID=gene-IXO1104_RS07920;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=IXO1104_RS07920;old_locus_tag=IXO1104_07870 NZ_CP047492.1 Protein Homology CDS 1702292 1703998 . - 0 ID=cds-WP_059317438.1;Parent=gene-IXO1104_RS07920;Dbxref=Genbank:WP_059317438.1;Name=WP_059317438.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802589.1;locus_tag=IXO1104_RS07920;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_059317438.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1704122 1705969 . - . ID=gene-IXO1104_RS07925;Name=IXO1104_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07925;old_locus_tag=IXO1104_07875 NZ_CP047492.1 Protein Homology CDS 1704122 1705969 . - 0 ID=cds-WP_011409142.1;Parent=gene-IXO1104_RS07925;Dbxref=Genbank:WP_011409142.1;Name=WP_011409142.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504375.1;locus_tag=IXO1104_RS07925;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_011409142.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1706150 1707058 . + . ID=gene-IXO1104_RS07930;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=IXO1104_RS07930;old_locus_tag=IXO1104_07880 NZ_CP047492.1 Protein Homology CDS 1706150 1707058 . + 0 ID=cds-WP_011259870.1;Parent=gene-IXO1104_RS07930;Dbxref=Genbank:WP_011259870.1;Name=WP_011259870.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370926.1;locus_tag=IXO1104_RS07930;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_011259870.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1707121 1709034 . + . ID=gene-IXO1104_RS07935;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=IXO1104_RS07935;old_locus_tag=IXO1104_07885 NZ_CP047492.1 Protein Homology CDS 1707121 1709034 . + 0 ID=cds-WP_027704223.1;Parent=gene-IXO1104_RS07935;Dbxref=Genbank:WP_027704223.1;Name=WP_027704223.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167870.1;locus_tag=IXO1104_RS07935;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_027704223.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1709469 1710539 . + . ID=gene-IXO1104_RS07940;Name=IXO1104_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07940;old_locus_tag=IXO1104_07890 NZ_CP047492.1 Protein Homology CDS 1709469 1710539 . + 0 ID=cds-WP_011409140.1;Parent=gene-IXO1104_RS07940;Dbxref=Genbank:WP_011409140.1;Name=WP_011409140.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974022.1;locus_tag=IXO1104_RS07940;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011409140.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1710536 1713661 . + . ID=gene-IXO1104_RS07945;Name=IXO1104_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07945;old_locus_tag=IXO1104_07895 NZ_CP047492.1 Protein Homology CDS 1710536 1713661 . + 0 ID=cds-WP_011259867.1;Parent=gene-IXO1104_RS07945;Dbxref=Genbank:WP_011259867.1;Name=WP_011259867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370936.1;locus_tag=IXO1104_RS07945;product=efflux RND transporter permease subunit;protein_id=WP_011259867.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1714013 1716682 . + . ID=gene-IXO1104_RS07950;Name=IXO1104_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07950;old_locus_tag=IXO1104_07900 NZ_CP047492.1 Protein Homology CDS 1714013 1716682 . + 0 ID=cds-WP_042465131.1;Parent=gene-IXO1104_RS07950;Dbxref=Genbank:WP_042465131.1;Name=WP_042465131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301826.1;locus_tag=IXO1104_RS07950;product=M1 family metallopeptidase;protein_id=WP_042465131.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1717047 1717499 . - . ID=gene-IXO1104_RS07955;Name=IXO1104_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07955;old_locus_tag=IXO1104_07905 NZ_CP047492.1 Protein Homology CDS 1717047 1717499 . - 0 ID=cds-WP_011259865.1;Parent=gene-IXO1104_RS07955;Dbxref=Genbank:WP_011259865.1;Name=WP_011259865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409137.1;locus_tag=IXO1104_RS07955;product=hypothetical protein;protein_id=WP_011259865.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1717562 1718527 . + . ID=gene-IXO1104_RS07960;Name=IXO1104_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07960;old_locus_tag=IXO1104_07910 NZ_CP047492.1 Protein Homology CDS 1717562 1718527 . + 0 ID=cds-WP_109182027.1-4;Parent=gene-IXO1104_RS07960;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS07960;product=IS1595 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1719183 1719718 . + . ID=gene-IXO1104_RS07965;Name=IXO1104_RS07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07965;old_locus_tag=IXO1104_07920;pseudo=true NZ_CP047492.1 Protein Homology CDS 1719183 1719718 . + 0 ID=cds-IXO1104_RS07965;Parent=gene-IXO1104_RS07965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477169.1;locus_tag=IXO1104_RS07965;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1719875 1720786 . + . ID=gene-IXO1104_RS07970;Name=IXO1104_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07970;old_locus_tag=IXO1104_07925 NZ_CP047492.1 Protein Homology CDS 1719875 1720786 . + 0 ID=cds-WP_011409134.1;Parent=gene-IXO1104_RS07970;Dbxref=Genbank:WP_011409134.1;Name=WP_011409134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301824.1;locus_tag=IXO1104_RS07970;product=RNA methyltransferase;protein_id=WP_011409134.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1721009 1722304 . + . ID=gene-IXO1104_RS07975;Name=IXO1104_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07975;old_locus_tag=IXO1104_07930 NZ_CP047492.1 Protein Homology CDS 1721009 1722304 . + 0 ID=cds-WP_228329657.1;Parent=gene-IXO1104_RS07975;Dbxref=Genbank:WP_228329657.1;Name=WP_228329657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.2;locus_tag=IXO1104_RS07975;product=carboxylesterase family protein;protein_id=WP_228329657.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1722392 1723355 . - . ID=gene-IXO1104_RS07980;Name=IXO1104_RS07980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS07980;old_locus_tag=IXO1104_07935;pseudo=true NZ_CP047492.1 Protein Homology CDS 1722392 1723355 . - 0 ID=cds-IXO1104_RS07980;Parent=gene-IXO1104_RS07980;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS07980;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1723860 1724623 . + . ID=gene-IXO1104_RS07985;Name=IXO1104_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS07985;old_locus_tag=IXO1104_07940 NZ_CP047492.1 Protein Homology CDS 1723860 1724175 . + 0 ID=cds-WP_094187715.1-6;Parent=gene-IXO1104_RS07985;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS07985;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1724175 1724623 . + 2 ID=cds-WP_094187715.1-6;Parent=gene-IXO1104_RS07985;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS07985;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1724685 1724760 . + . ID=gene-IXO1104_RS07990;Name=IXO1104_RS07990;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS07990;old_locus_tag=IXO1104_07945 NZ_CP047492.1 cmsearch ncRNA 1724685 1724760 . + . ID=rna-IXO1104_RS07990;Parent=gene-IXO1104_RS07990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07990;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1724685 1724760 . + . ID=exon-IXO1104_RS07990-1;Parent=rna-IXO1104_RS07990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS07990;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1724755 1725177 . - . ID=gene-IXO1104_RS07995;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=IXO1104_RS07995;old_locus_tag=IXO1104_07950 NZ_CP047492.1 Protein Homology CDS 1724755 1725177 . - 0 ID=cds-WP_012445603.1;Parent=gene-IXO1104_RS07995;Dbxref=Genbank:WP_012445603.1;Name=WP_012445603.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409130.1;locus_tag=IXO1104_RS07995;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_012445603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1725238 1725951 . - . ID=gene-IXO1104_RS08000;Name=IXO1104_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08000;old_locus_tag=IXO1104_07955 NZ_CP047492.1 Protein Homology CDS 1725238 1725951 . - 0 ID=cds-WP_011409129.1;Parent=gene-IXO1104_RS08000;Dbxref=Genbank:WP_011409129.1;Name=WP_011409129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052181.1;locus_tag=IXO1104_RS08000;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011409129.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1726120 1727136 . - . ID=gene-IXO1104_RS08005;Name=IXO1104_RS08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08005;old_locus_tag=IXO1104_07960;pseudo=true NZ_CP047492.1 Protein Homology CDS 1726120 1727136 . - 0 ID=cds-IXO1104_RS08005;Parent=gene-IXO1104_RS08005;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1104_RS08005;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1727484 1728859 . - . ID=gene-IXO1104_RS08010;Name=IXO1104_RS08010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08010;old_locus_tag=IXO1104_07965;pseudo=true NZ_CP047492.1 Protein Homology CDS 1727484 1728859 . - 0 ID=cds-IXO1104_RS08010;Parent=gene-IXO1104_RS08010;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS08010;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1728998 1729273 . - . ID=gene-IXO1104_RS08015;Name=IXO1104_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08015;old_locus_tag=IXO1104_07970 NZ_CP047492.1 Protein Homology CDS 1728998 1729273 . - 0 ID=cds-WP_011259856.1;Parent=gene-IXO1104_RS08015;Dbxref=Genbank:WP_011259856.1;Name=WP_011259856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259856.1;locus_tag=IXO1104_RS08015;product=hypothetical protein;protein_id=WP_011259856.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1729533 1729874 . + . ID=gene-IXO1104_RS08020;Name=IXO1104_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08020;old_locus_tag=IXO1104_07975 NZ_CP047492.1 Protein Homology CDS 1729533 1729874 . + 0 ID=cds-WP_011409127.1;Parent=gene-IXO1104_RS08020;Dbxref=Genbank:WP_011409127.1;Name=WP_011409127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155445.1;locus_tag=IXO1104_RS08020;product=Rieske (2Fe-2S) protein;protein_id=WP_011409127.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1729932 1731794 . - . ID=gene-IXO1104_RS08025;Name=IXO1104_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08025;old_locus_tag=IXO1104_07980 NZ_CP047492.1 Protein Homology CDS 1729932 1731794 . - 0 ID=cds-WP_011259854.1;Parent=gene-IXO1104_RS08025;Dbxref=Genbank:WP_011259854.1;Name=WP_011259854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237329.1;locus_tag=IXO1104_RS08025;product=SLC13 family permease;protein_id=WP_011259854.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1731870 1732628 . - . ID=gene-IXO1104_RS08030;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08030;old_locus_tag=IXO1104_07985 NZ_CP047492.1 Protein Homology CDS 1731870 1732628 . - 0 ID=cds-WP_011259853.1;Parent=gene-IXO1104_RS08030;Dbxref=Genbank:WP_011259853.1;Name=WP_011259853.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851486.1;locus_tag=IXO1104_RS08030;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011259853.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1732930 1733724 . - . ID=gene-IXO1104_RS08035;Name=IXO1104_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08035;old_locus_tag=IXO1104_07990 NZ_CP047492.1 Protein Homology CDS 1732930 1733724 . - 0 ID=cds-WP_011409125.1;Parent=gene-IXO1104_RS08035;Dbxref=Genbank:WP_011409125.1;Name=WP_011409125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487184.1;locus_tag=IXO1104_RS08035;product=thiazole synthase;protein_id=WP_011409125.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1734260 1734460 . - . ID=gene-IXO1104_RS08040;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=IXO1104_RS08040;old_locus_tag=IXO1104_07995 NZ_CP047492.1 Protein Homology CDS 1734260 1734460 . - 0 ID=cds-WP_011259851.1;Parent=gene-IXO1104_RS08040;Dbxref=Genbank:WP_011259851.1;Name=WP_011259851.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903326.1;locus_tag=IXO1104_RS08040;product=sulfur carrier protein ThiS;protein_id=WP_011259851.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1734651 1736435 . + . ID=gene-IXO1104_RS08045;Name=IXO1104_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08045;old_locus_tag=IXO1104_08000 NZ_CP047492.1 Protein Homology CDS 1734651 1736435 . + 0 ID=cds-WP_012445601.1;Parent=gene-IXO1104_RS08045;Dbxref=Genbank:WP_012445601.1;Name=WP_012445601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914545.1;locus_tag=IXO1104_RS08045;product=autotransporter domain-containing esterase;protein_id=WP_012445601.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1736552 1736625 . + . ID=gene-IXO1104_RS08050;Name=IXO1104_RS08050;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS08050;old_locus_tag=IXO1104_08005 NZ_CP047492.1 tRNAscan-SE tRNA 1736552 1736625 . + . ID=rna-IXO1104_RS08050;Parent=gene-IXO1104_RS08050;anticodon=(pos:1736584..1736586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS08050;product=tRNA-Gly NZ_CP047492.1 tRNAscan-SE exon 1736552 1736625 . + . ID=exon-IXO1104_RS08050-1;Parent=rna-IXO1104_RS08050;anticodon=(pos:1736584..1736586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS08050;product=tRNA-Gly NZ_CP047492.1 RefSeq pseudogene 1737017 1737977 . - . ID=gene-IXO1104_RS08055;Name=IXO1104_RS08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08055;old_locus_tag=IXO1104_08010;pseudo=true NZ_CP047492.1 Protein Homology CDS 1737017 1737977 . - 0 ID=cds-IXO1104_RS08055;Parent=gene-IXO1104_RS08055;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS08055;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1738227 1738622 . - . ID=gene-IXO1104_RS08060;Name=IXO1104_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08060;old_locus_tag=IXO1104_08015 NZ_CP047492.1 GeneMarkS-2+ CDS 1738227 1738622 . - 0 ID=cds-WP_228329658.1;Parent=gene-IXO1104_RS08060;Dbxref=Genbank:WP_228329658.1;Name=WP_228329658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08060;product=hypothetical protein;protein_id=WP_228329658.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1738692 1739793 . + . ID=gene-IXO1104_RS08065;Name=IXO1104_RS08065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08065;old_locus_tag=IXO1104_08020;pseudo=true NZ_CP047492.1 Protein Homology CDS 1738692 1739793 . + 0 ID=cds-IXO1104_RS08065;Parent=gene-IXO1104_RS08065;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS08065;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1739828 1740346 . - . ID=gene-IXO1104_RS08070;Name=IXO1104_RS08070;end_range=1740346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08070;old_locus_tag=IXO1104_08025;partial=true;pseudo=true;start_range=.,1739828 NZ_CP047492.1 Protein Homology CDS 1739828 1740346 . - 0 ID=cds-IXO1104_RS08070;Parent=gene-IXO1104_RS08070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1740346,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS08070;partial=true;product=transposase;pseudo=true;start_range=.,1739828;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1740564 1740674 . + . ID=gene-IXO1104_RS08075;Name=IXO1104_RS08075;end_range=1740674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08075;old_locus_tag=IXO1104_08030;partial=true;pseudo=true;start_range=.,1740564 NZ_CP047492.1 Protein Homology CDS 1740564 1740674 . + 0 ID=cds-IXO1104_RS08075;Parent=gene-IXO1104_RS08075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1740674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS08075;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1740564;transl_table=11 NZ_CP047492.1 RefSeq gene 1740901 1741293 . + . ID=gene-IXO1104_RS08080;Name=IXO1104_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08080;old_locus_tag=IXO1104_08035 NZ_CP047492.1 Protein Homology CDS 1740901 1741293 . + 0 ID=cds-WP_027704094.1;Parent=gene-IXO1104_RS08080;Dbxref=Genbank:WP_027704094.1;Name=WP_027704094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173974.1;locus_tag=IXO1104_RS08080;product=hypothetical protein;protein_id=WP_027704094.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1741384 1741776 . + . ID=gene-IXO1104_RS08085;Name=IXO1104_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08085;old_locus_tag=IXO1104_08040 NZ_CP047492.1 Protein Homology CDS 1741384 1741776 . + 0 ID=cds-WP_011409118.1;Parent=gene-IXO1104_RS08085;Dbxref=Genbank:WP_011409118.1;Name=WP_011409118.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154750.1;locus_tag=IXO1104_RS08085;product=H-NS histone family protein;protein_id=WP_011409118.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1741809 1742559 . - . ID=gene-IXO1104_RS08090;Name=IXO1104_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08090;old_locus_tag=IXO1104_08045 NZ_CP047492.1 Protein Homology CDS 1742347 1742559 . - 0 ID=cds-WP_133264712.1;Parent=gene-IXO1104_RS08090;Dbxref=Genbank:WP_133264712.1;Name=WP_133264712.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1104_RS08090;product=IS5 family transposase;protein_id=WP_133264712.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1741809 1742345 . - 0 ID=cds-WP_133264712.1;Parent=gene-IXO1104_RS08090;Dbxref=Genbank:WP_133264712.1;Name=WP_133264712.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1104_RS08090;product=IS5 family transposase;protein_id=WP_133264712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1742560 1743516 . - . ID=gene-IXO1104_RS08095;Name=IXO1104_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08095;old_locus_tag=IXO1104_08050 NZ_CP047492.1 Protein Homology CDS 1742560 1743516 . - 0 ID=cds-WP_041182545.1-4;Parent=gene-IXO1104_RS08095;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS08095;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1743610 1745136 . + . ID=gene-IXO1104_RS08100;Name=IXO1104_RS08100;end_range=1745136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08100;old_locus_tag=IXO1104_08055;partial=true;pseudo=true;start_range=.,1743610 NZ_CP047492.1 Protein Homology CDS 1743610 1745136 . + 0 ID=cds-IXO1104_RS08100;Parent=gene-IXO1104_RS08100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1745136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258408.1;locus_tag=IXO1104_RS08100;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,1743610;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1745198 1746299 . + . ID=gene-IXO1104_RS08105;Name=IXO1104_RS08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08105;old_locus_tag=IXO1104_08060;pseudo=true NZ_CP047492.1 Protein Homology CDS 1745198 1746299 . + 0 ID=cds-IXO1104_RS08105;Parent=gene-IXO1104_RS08105;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS08105;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1746342 1747140 . + . ID=gene-IXO1104_RS08110;Name=IXO1104_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08110;old_locus_tag=IXO1104_08065 NZ_CP047492.1 Protein Homology CDS 1746342 1746613 . + 0 ID=cds-WP_094187728.1-4;Parent=gene-IXO1104_RS08110;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS08110;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1746612 1747140 . + 1 ID=cds-WP_094187728.1-4;Parent=gene-IXO1104_RS08110;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS08110;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1747178 1748770 . - . ID=gene-IXO1104_RS08115;Name=IXO1104_RS08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08115;old_locus_tag=IXO1104_08070;partial=true;pseudo=true;start_range=.,1747178 NZ_CP047492.1 Protein Homology CDS 1747178 1748770 . - 0 ID=cds-IXO1104_RS08115;Parent=gene-IXO1104_RS08115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444487.1;locus_tag=IXO1104_RS08115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1747178;transl_table=11 NZ_CP047492.1 RefSeq gene 1748767 1748970 . - . ID=gene-IXO1104_RS08120;Name=IXO1104_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08120;old_locus_tag=IXO1104_08075 NZ_CP047492.1 GeneMarkS-2+ CDS 1748767 1748970 . - 0 ID=cds-WP_012445372.1;Parent=gene-IXO1104_RS08120;Dbxref=Genbank:WP_012445372.1;Name=WP_012445372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08120;product=hypothetical protein;protein_id=WP_012445372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1749041 1751596 . - . ID=gene-IXO1104_RS08125;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=IXO1104_RS08125;old_locus_tag=IXO1104_08080 NZ_CP047492.1 Protein Homology CDS 1749041 1751596 . - 0 ID=cds-WP_011408105.1;Parent=gene-IXO1104_RS08125;Dbxref=Genbank:WP_011408105.1;Name=WP_011408105.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484195.1;locus_tag=IXO1104_RS08125;product=DNA mismatch repair protein MutS;protein_id=WP_011408105.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1752365 1753406 . - . ID=gene-IXO1104_RS08130;Name=IXO1104_RS08130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08130;old_locus_tag=IXO1104_08085;pseudo=true NZ_CP047492.1 Protein Homology CDS 1752365 1753406 . - 0 ID=cds-IXO1104_RS08130;Parent=gene-IXO1104_RS08130;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS08130;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1753536 1754188 . + . ID=gene-IXO1104_RS08135;Name=IXO1104_RS08135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08135;old_locus_tag=IXO1104_08090;partial=true;pseudo=true;start_range=.,1753536 NZ_CP047492.1 Protein Homology CDS 1753536 1754188 . + 0 ID=cds-IXO1104_RS08135;Parent=gene-IXO1104_RS08135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS08135;partial=true;product=transposase;pseudo=true;start_range=.,1753536;transl_table=11 NZ_CP047492.1 RefSeq gene 1754569 1755960 . - . ID=gene-IXO1104_RS08140;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08140;old_locus_tag=IXO1104_08095 NZ_CP047492.1 Protein Homology CDS 1754569 1755960 . - 0 ID=cds-WP_011258418.1;Parent=gene-IXO1104_RS08140;Dbxref=Genbank:WP_011258418.1;Name=WP_011258418.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484290.1;locus_tag=IXO1104_RS08140;product=DNA repair protein RadA;protein_id=WP_011258418.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1756046 1757087 . - . ID=gene-IXO1104_RS08145;Name=IXO1104_RS08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08145;old_locus_tag=IXO1104_08100;pseudo=true NZ_CP047492.1 Protein Homology CDS 1756046 1757087 . - 0 ID=cds-IXO1104_RS08145;Parent=gene-IXO1104_RS08145;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS08145;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1757352 1758908 . + . ID=gene-IXO1104_RS08150;Name=IXO1104_RS08150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08150;old_locus_tag=IXO1104_08105;pseudo=true NZ_CP047492.1 Protein Homology CDS 1757352 1758908 . + 0 ID=cds-IXO1104_RS08150;Parent=gene-IXO1104_RS08150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156664.1;locus_tag=IXO1104_RS08150;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1759172 1761321 . - . ID=gene-IXO1104_RS08155;Name=IXO1104_RS08155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08155;old_locus_tag=IXO1104_08110;pseudo=true NZ_CP047492.1 Protein Homology CDS 1759172 1761321 . - 0 ID=cds-IXO1104_RS08155;Parent=gene-IXO1104_RS08155;Note=frameshifted%3B internal stop;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118433.1;locus_tag=IXO1104_RS08155;product=phospholipase C%2C phosphocholine-specific;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1761492 1762730 . - . ID=gene-IXO1104_RS08160;Name=IXO1104_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08160;old_locus_tag=IXO1104_08115 NZ_CP047492.1 Protein Homology CDS 1761492 1762730 . - 0 ID=cds-WP_011408111.1;Parent=gene-IXO1104_RS08160;Dbxref=Genbank:WP_011408111.1;Name=WP_011408111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445363.1;locus_tag=IXO1104_RS08160;product=MFS transporter;protein_id=WP_011408111.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1763171 1763464 . + . ID=gene-IXO1104_RS08165;Name=IXO1104_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08165;old_locus_tag=IXO1104_08120 NZ_CP047492.1 Protein Homology CDS 1763171 1763464 . + 0 ID=cds-WP_011408112.1;Parent=gene-IXO1104_RS08165;Dbxref=Genbank:WP_011408112.1;Name=WP_011408112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578079.1;locus_tag=IXO1104_RS08165;product=zinc ribbon domain-containing protein;protein_id=WP_011408112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1763962 1764738 . - . ID=gene-IXO1104_RS08170;Name=IXO1104_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08170;old_locus_tag=IXO1104_08125 NZ_CP047492.1 Protein Homology CDS 1763962 1764738 . - 0 ID=cds-WP_011258426.1;Parent=gene-IXO1104_RS08170;Dbxref=Genbank:WP_011258426.1;Name=WP_011258426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156660.1;locus_tag=IXO1104_RS08170;product=DUF3011 domain-containing protein;protein_id=WP_011258426.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1764896 1766662 . + . ID=gene-IXO1104_RS08175;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=IXO1104_RS08175;old_locus_tag=IXO1104_08130 NZ_CP047492.1 Protein Homology CDS 1764896 1766662 . + 0 ID=cds-WP_011408113.1;Parent=gene-IXO1104_RS08175;Dbxref=Genbank:WP_011408113.1;Name=WP_011408113.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913642.1;locus_tag=IXO1104_RS08175;product=aspartate--tRNA ligase;protein_id=WP_011408113.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1767174 1767701 . + . ID=gene-IXO1104_RS08180;Name=IXO1104_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08180;old_locus_tag=IXO1104_08135 NZ_CP047492.1 Protein Homology CDS 1767174 1767701 . + 0 ID=cds-WP_011258428.1;Parent=gene-IXO1104_RS08180;Dbxref=Genbank:WP_011258428.1;Name=WP_011258428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504183.1;locus_tag=IXO1104_RS08180;product=GNAT family N-acetyltransferase;protein_id=WP_011258428.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1767801 1768478 . + . ID=gene-IXO1104_RS08185;Name=IXO1104_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08185;old_locus_tag=IXO1104_08140 NZ_CP047492.1 Protein Homology CDS 1767801 1768478 . + 0 ID=cds-WP_027703718.1;Parent=gene-IXO1104_RS08185;Dbxref=Genbank:WP_027703718.1;Name=WP_027703718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112578.1;locus_tag=IXO1104_RS08185;product=alpha/beta hydrolase;protein_id=WP_027703718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1768568 1769296 . + . ID=gene-IXO1104_RS08190;Name=IXO1104_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08190;old_locus_tag=IXO1104_08145 NZ_CP047492.1 Protein Homology CDS 1768568 1769296 . + 0 ID=cds-WP_011258430.1;Parent=gene-IXO1104_RS08190;Dbxref=Genbank:WP_011258430.1;Name=WP_011258430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052063.1;locus_tag=IXO1104_RS08190;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_011258430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1769411 1769935 . + . ID=gene-IXO1104_RS08195;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=IXO1104_RS08195;old_locus_tag=IXO1104_08150 NZ_CP047492.1 Protein Homology CDS 1769411 1769935 . + 0 ID=cds-WP_011258431.1;Parent=gene-IXO1104_RS08195;Dbxref=Genbank:WP_011258431.1;Name=WP_011258431.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156655.1;locus_tag=IXO1104_RS08195;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_011258431.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1770093 1770677 . + . ID=gene-IXO1104_RS08200;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08200;old_locus_tag=IXO1104_08155 NZ_CP047492.1 Protein Homology CDS 1770093 1770677 . + 0 ID=cds-WP_011258432.1;Parent=gene-IXO1104_RS08200;Dbxref=Genbank:WP_011258432.1;Name=WP_011258432.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=IXO1104_RS08200;product=Holliday junction branch migration protein RuvA;protein_id=WP_011258432.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1770877 1772784 . + . ID=gene-IXO1104_RS08205;Name=IXO1104_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08205;old_locus_tag=IXO1104_08160 NZ_CP047492.1 Protein Homology CDS 1770877 1772784 . + 0 ID=cds-WP_011258433.1;Parent=gene-IXO1104_RS08205;Dbxref=Genbank:WP_011258433.1;Name=WP_011258433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156654.1;locus_tag=IXO1104_RS08205;product=potassium transporter Kup;protein_id=WP_011258433.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1772913 1773950 . + . ID=gene-IXO1104_RS08210;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08210;old_locus_tag=IXO1104_08165 NZ_CP047492.1 Protein Homology CDS 1772913 1773950 . + 0 ID=cds-WP_010363979.1;Parent=gene-IXO1104_RS08210;Dbxref=Genbank:WP_010363979.1;Name=WP_010363979.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363979.1;locus_tag=IXO1104_RS08210;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_010363979.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1774003 1774461 . + . ID=gene-IXO1104_RS08215;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=IXO1104_RS08215;old_locus_tag=IXO1104_08170 NZ_CP047492.1 Protein Homology CDS 1774003 1774461 . + 0 ID=cds-WP_011258434.1;Parent=gene-IXO1104_RS08215;Dbxref=Genbank:WP_011258434.1;Name=WP_011258434.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258434.1;locus_tag=IXO1104_RS08215;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_011258434.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1774473 1775252 . + . ID=gene-IXO1104_RS08220;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS08220;old_locus_tag=IXO1104_08175 NZ_CP047492.1 Protein Homology CDS 1774473 1775252 . + 0 ID=cds-WP_075240560.1;Parent=gene-IXO1104_RS08220;Dbxref=Genbank:WP_075240560.1;Name=WP_075240560.1;Ontology_term=GO:1902600,GO:0015078,GO:0005887;gbkey=CDS;gene=tolQ;go_component=integral component of plasma membrane|0005887||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913648.1;locus_tag=IXO1104_RS08220;product=protein TolQ;protein_id=WP_075240560.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1775409 1775858 . + . ID=gene-IXO1104_RS08225;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=IXO1104_RS08225;old_locus_tag=IXO1104_08180 NZ_CP047492.1 Protein Homology CDS 1775409 1775858 . + 0 ID=cds-WP_011408114.1;Parent=gene-IXO1104_RS08225;Dbxref=Genbank:WP_011408114.1;Name=WP_011408114.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0031237;gbkey=CDS;gene=tolR;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913652.1;locus_tag=IXO1104_RS08225;product=protein TolR;protein_id=WP_011408114.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1775848 1776888 . + . ID=gene-IXO1104_RS08230;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08230;old_locus_tag=IXO1104_08185 NZ_CP047492.1 Protein Homology CDS 1775848 1776888 . + 0 ID=cds-WP_027703717.1;Parent=gene-IXO1104_RS08230;Dbxref=Genbank:WP_027703717.1;Name=WP_027703717.1;Ontology_term=GO:0006810,GO:0005215,GO:0031237;gbkey=CDS;gene=tolA;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482566.1;locus_tag=IXO1104_RS08230;product=cell envelope integrity protein TolA;protein_id=WP_027703717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1777148 1778467 . + . ID=gene-IXO1104_RS08235;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08235;old_locus_tag=IXO1104_08190 NZ_CP047492.1 Protein Homology CDS 1777148 1778467 . + 0 ID=cds-WP_041182054.1;Parent=gene-IXO1104_RS08235;Dbxref=Genbank:WP_041182054.1;Name=WP_041182054.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445349.1;locus_tag=IXO1104_RS08235;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_041182054.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1778525 1779043 . + . ID=gene-IXO1104_RS08240;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=IXO1104_RS08240;old_locus_tag=IXO1104_08195 NZ_CP047492.1 Protein Homology CDS 1778525 1779043 . + 0 ID=cds-WP_011408116.1;Parent=gene-IXO1104_RS08240;Dbxref=Genbank:WP_011408116.1;Name=WP_011408116.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344309.1;locus_tag=IXO1104_RS08240;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_011408116.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1779050 1779868 . + . ID=gene-IXO1104_RS08245;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=IXO1104_RS08245;old_locus_tag=IXO1104_08200 NZ_CP047492.1 Protein Homology CDS 1779050 1779868 . + 0 ID=cds-WP_011258440.1;Parent=gene-IXO1104_RS08245;Dbxref=Genbank:WP_011258440.1;Name=WP_011258440.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304871.1;locus_tag=IXO1104_RS08245;product=tol-pal system protein YbgF;protein_id=WP_011258440.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1779911 1780594 . + . ID=gene-IXO1104_RS08250;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=IXO1104_RS08250;old_locus_tag=IXO1104_08205 NZ_CP047492.1 Protein Homology CDS 1779911 1780594 . + 0 ID=cds-WP_011408117.1;Parent=gene-IXO1104_RS08250;Dbxref=Genbank:WP_011408117.1;Name=WP_011408117.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165275.1;locus_tag=IXO1104_RS08250;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_011408117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1780714 1781949 . + . ID=gene-IXO1104_RS08255;Name=IXO1104_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08255;old_locus_tag=IXO1104_08210 NZ_CP047492.1 Protein Homology CDS 1780714 1781949 . + 0 ID=cds-WP_044756360.1-2;Parent=gene-IXO1104_RS08255;Dbxref=Genbank:WP_044756360.1;Name=WP_044756360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS08255;product=ISL3 family transposase;protein_id=WP_044756360.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1782000 1782763 . - . ID=gene-IXO1104_RS08260;Name=IXO1104_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08260;old_locus_tag=IXO1104_08215 NZ_CP047492.1 Protein Homology CDS 1782448 1782763 . - 0 ID=cds-WP_094187715.1-7;Parent=gene-IXO1104_RS08260;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS08260;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1782000 1782448 . - 2 ID=cds-WP_094187715.1-7;Parent=gene-IXO1104_RS08260;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS08260;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1782830 1784206 . - . ID=gene-IXO1104_RS08265;Name=IXO1104_RS08265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08265;old_locus_tag=IXO1104_08220;pseudo=true NZ_CP047492.1 Protein Homology CDS 1782830 1784206 . - 0 ID=cds-IXO1104_RS08265;Parent=gene-IXO1104_RS08265;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS08265;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1784398 1784474 . + . ID=gene-IXO1104_RS08270;Name=IXO1104_RS08270;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS08270;old_locus_tag=IXO1104_08225 NZ_CP047492.1 cmsearch ncRNA 1784398 1784474 . + . ID=rna-IXO1104_RS08270;Parent=gene-IXO1104_RS08270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08270;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1784398 1784474 . + . ID=exon-IXO1104_RS08270-1;Parent=rna-IXO1104_RS08270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08270;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1784585 1785259 . + . ID=gene-IXO1104_RS08275;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=IXO1104_RS08275;old_locus_tag=IXO1104_08230 NZ_CP047492.1 Protein Homology CDS 1784585 1785259 . + 0 ID=cds-WP_008578058.1;Parent=gene-IXO1104_RS08275;Dbxref=Genbank:WP_008578058.1;Name=WP_008578058.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038130.1;locus_tag=IXO1104_RS08275;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_008578058.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1785307 1785382 . + . ID=gene-IXO1104_RS08280;Name=IXO1104_RS08280;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS08280;old_locus_tag=IXO1104_08235 NZ_CP047492.1 tRNAscan-SE tRNA 1785307 1785382 . + . ID=rna-IXO1104_RS08280;Parent=gene-IXO1104_RS08280;anticodon=(pos:1785340..1785342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS08280;product=tRNA-Lys NZ_CP047492.1 tRNAscan-SE exon 1785307 1785382 . + . ID=exon-IXO1104_RS08280-1;Parent=rna-IXO1104_RS08280;anticodon=(pos:1785340..1785342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS08280;product=tRNA-Lys NZ_CP047492.1 RefSeq pseudogene 1785529 1785677 . - . ID=gene-IXO1104_RS08285;Name=IXO1104_RS08285;end_range=1785677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08285;old_locus_tag=IXO1104_08240;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1785529 1785677 . - 0 ID=cds-IXO1104_RS08285;Parent=gene-IXO1104_RS08285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1785677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257519.1;locus_tag=IXO1104_RS08285;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1785890 1786294 . - . ID=gene-IXO1104_RS08290;Name=IXO1104_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08290;old_locus_tag=IXO1104_08245 NZ_CP047492.1 Protein Homology CDS 1785890 1786294 . - 0 ID=cds-WP_027703393.1;Parent=gene-IXO1104_RS08290;Dbxref=Genbank:WP_027703393.1;Name=WP_027703393.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090797.1;locus_tag=IXO1104_RS08290;product=response regulator;protein_id=WP_027703393.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1786373 1786870 . - . ID=gene-IXO1104_RS08295;Name=IXO1104_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08295;old_locus_tag=IXO1104_08250 NZ_CP047492.1 Protein Homology CDS 1786373 1786870 . - 0 ID=cds-WP_011408165.1;Parent=gene-IXO1104_RS08295;Dbxref=Genbank:WP_011408165.1;Name=WP_011408165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155539.1;locus_tag=IXO1104_RS08295;product=hypothetical protein;protein_id=WP_011408165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1787009 1788805 . - . ID=gene-IXO1104_RS08300;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS08300;old_locus_tag=IXO1104_08255 NZ_CP047492.1 Protein Homology CDS 1787009 1788805 . - 0 ID=cds-WP_011258487.1;Parent=gene-IXO1104_RS08300;Dbxref=Genbank:WP_011258487.1;Name=WP_011258487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155540.1;locus_tag=IXO1104_RS08300;product=DNA helicase RecQ;protein_id=WP_011258487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1789363 1789908 . - . ID=gene-IXO1104_RS08305;Name=IXO1104_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08305;old_locus_tag=IXO1104_08260 NZ_CP047492.1 Protein Homology CDS 1789363 1789908 . - 0 ID=cds-WP_011408166.1;Parent=gene-IXO1104_RS08305;Dbxref=Genbank:WP_011408166.1;Name=WP_011408166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364158.1;locus_tag=IXO1104_RS08305;product=DNA starvation/stationary phase protection protein;protein_id=WP_011408166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1790010 1794131 . + . ID=gene-IXO1104_RS08310;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08310;old_locus_tag=IXO1104_08265 NZ_CP047492.1 Protein Homology CDS 1790010 1794131 . + 0 ID=cds-WP_027703394.1;Parent=gene-IXO1104_RS08310;Dbxref=Genbank:WP_027703394.1;Name=WP_027703394.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303863.1;locus_tag=IXO1104_RS08310;product=ATP-dependent RNA helicase HrpA;protein_id=WP_027703394.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1794352 1797006 . - . ID=gene-IXO1104_RS08315;Name=IXO1104_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08315;old_locus_tag=IXO1104_08270 NZ_CP047492.1 Protein Homology CDS 1794352 1797006 . - 0 ID=cds-WP_027703395.1;Parent=gene-IXO1104_RS08315;Dbxref=Genbank:WP_027703395.1;Name=WP_027703395.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988680.1;locus_tag=IXO1104_RS08315;product=TonB-dependent receptor;protein_id=WP_027703395.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1797108 1798147 . - . ID=gene-IXO1104_RS08320;Name=IXO1104_RS08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08320;old_locus_tag=IXO1104_08275;pseudo=true NZ_CP047492.1 Protein Homology CDS 1797108 1798147 . - 0 ID=cds-IXO1104_RS08320;Parent=gene-IXO1104_RS08320;Note=frameshifted%3B internal stop;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052049.1;locus_tag=IXO1104_RS08320;product=glucokinase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1798448 1799962 . - . ID=gene-IXO1104_RS08325;Name=IXO1104_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08325;old_locus_tag=IXO1104_08280 NZ_CP047492.1 Protein Homology CDS 1798448 1799962 . - 0 ID=cds-WP_027703396.1;Parent=gene-IXO1104_RS08325;Dbxref=Genbank:WP_027703396.1;Name=WP_027703396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159318.1;locus_tag=IXO1104_RS08325;product=PhoPQ-activated protein PqaA family protein;protein_id=WP_027703396.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1800391 1800903 . - . ID=gene-IXO1104_RS08330;Name=IXO1104_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08330;old_locus_tag=IXO1104_08285 NZ_CP047492.1 Protein Homology CDS 1800391 1800903 . - 0 ID=cds-WP_011408171.1;Parent=gene-IXO1104_RS08330;Dbxref=Genbank:WP_011408171.1;Name=WP_011408171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482518.1;locus_tag=IXO1104_RS08330;product=hypothetical protein;protein_id=WP_011408171.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1800966 1802084 . - . ID=gene-IXO1104_RS08335;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=IXO1104_RS08335;old_locus_tag=IXO1104_08290 NZ_CP047492.1 Protein Homology CDS 1800966 1802084 . - 0 ID=cds-WP_012445335.1;Parent=gene-IXO1104_RS08335;Dbxref=Genbank:WP_012445335.1;Name=WP_012445335.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160183.1;locus_tag=IXO1104_RS08335;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_012445335.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1802081 1802359 . - . ID=gene-IXO1104_RS08340;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=IXO1104_RS08340;old_locus_tag=IXO1104_08295 NZ_CP047492.1 Protein Homology CDS 1802081 1802359 . - 0 ID=cds-WP_012445334.1;Parent=gene-IXO1104_RS08340;Dbxref=Genbank:WP_012445334.1;Name=WP_012445334.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445334.1;locus_tag=IXO1104_RS08340;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_012445334.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1802356 1803108 . - . ID=gene-IXO1104_RS08345;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=IXO1104_RS08345;old_locus_tag=IXO1104_08300 NZ_CP047492.1 Protein Homology CDS 1802356 1803108 . - 0 ID=cds-WP_012445333.1;Parent=gene-IXO1104_RS08345;Dbxref=Genbank:WP_012445333.1;Name=WP_012445333.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437693.1;locus_tag=IXO1104_RS08345;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_012445333.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1803105 1804004 . - . ID=gene-IXO1104_RS08350;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08350;old_locus_tag=IXO1104_08305 NZ_CP047492.1 Protein Homology CDS 1803105 1804004 . - 0 ID=cds-WP_027703397.1;Parent=gene-IXO1104_RS08350;Dbxref=Genbank:WP_027703397.1;Name=WP_027703397.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038060.1;locus_tag=IXO1104_RS08350;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_027703397.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1804088 1804168 . - . ID=gene-IXO1104_RS08355;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08355;old_locus_tag=IXO1104_08310 NZ_CP047492.1 Protein Homology CDS 1804088 1804168 . - 0 ID=cds-WP_002812057.1;Parent=gene-IXO1104_RS08355;Dbxref=Genbank:WP_002812057.1;Name=WP_002812057.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: protein motif:HMM:NF001400.0;locus_tag=IXO1104_RS08355;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_002812057.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1804458 1806644 . + . ID=gene-IXO1104_RS08360;Name=IXO1104_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08360;old_locus_tag=IXO1104_08315 NZ_CP047492.1 Protein Homology CDS 1804458 1806644 . + 0 ID=cds-WP_012445331.1;Parent=gene-IXO1104_RS08360;Dbxref=Genbank:WP_012445331.1;Name=WP_012445331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090786.1;locus_tag=IXO1104_RS08360;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_012445331.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1806976 1808418 . + . ID=gene-IXO1104_RS08365;Name=IXO1104_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08365;old_locus_tag=IXO1104_08320 NZ_CP047492.1 Protein Homology CDS 1806976 1808418 . + 0 ID=cds-WP_027703398.1;Parent=gene-IXO1104_RS08365;Dbxref=Genbank:WP_027703398.1;Name=WP_027703398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913689.1;locus_tag=IXO1104_RS08365;product=hypothetical protein;protein_id=WP_027703398.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1808751 1810853 . - . ID=gene-IXO1104_RS08370;Name=IXO1104_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08370;old_locus_tag=IXO1104_08325 NZ_CP047492.1 Protein Homology CDS 1808751 1810853 . - 0 ID=cds-WP_011408177.1;Parent=gene-IXO1104_RS08370;Dbxref=Genbank:WP_011408177.1;Name=WP_011408177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113094.1;locus_tag=IXO1104_RS08370;product=glycosyltransferase;protein_id=WP_011408177.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1811095 1813539 . + . ID=gene-IXO1104_RS08375;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08375;old_locus_tag=IXO1104_08330 NZ_CP047492.1 Protein Homology CDS 1811095 1813539 . + 0 ID=cds-WP_012445329.1;Parent=gene-IXO1104_RS08375;Dbxref=Genbank:WP_012445329.1;Name=WP_012445329.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116043.1;locus_tag=IXO1104_RS08375;product=penicillin-binding protein 1B;protein_id=WP_012445329.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1813553 1814077 . + . ID=gene-IXO1104_RS08380;Name=IXO1104_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08380;old_locus_tag=IXO1104_08335 NZ_CP047492.1 Protein Homology CDS 1813553 1814077 . + 0 ID=cds-WP_075240499.1;Parent=gene-IXO1104_RS08380;Dbxref=Genbank:WP_075240499.1;Name=WP_075240499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348248.1;locus_tag=IXO1104_RS08380;product=hypothetical protein;protein_id=WP_075240499.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1814279 1816306 . + . ID=gene-IXO1104_RS08385;Name=IXO1104_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08385;old_locus_tag=IXO1104_08340 NZ_CP047492.1 Protein Homology CDS 1814279 1816306 . + 0 ID=cds-WP_044756945.1;Parent=gene-IXO1104_RS08385;Dbxref=Genbank:WP_044756945.1;Name=WP_044756945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364197.1;locus_tag=IXO1104_RS08385;product=ATP-dependent DNA helicase;protein_id=WP_044756945.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1816320 1817039 . + . ID=gene-IXO1104_RS08390;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08390;old_locus_tag=IXO1104_08345 NZ_CP047492.1 Protein Homology CDS 1816320 1817039 . + 0 ID=cds-WP_012445327.1;Parent=gene-IXO1104_RS08390;Dbxref=Genbank:WP_012445327.1;Name=WP_012445327.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155557.1;locus_tag=IXO1104_RS08390;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_012445327.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1817002 1817952 . + . ID=gene-IXO1104_RS08395;Name=IXO1104_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08395;old_locus_tag=IXO1104_08350 NZ_CP047492.1 Protein Homology CDS 1817002 1817952 . + 0 ID=cds-WP_044757457.1;Parent=gene-IXO1104_RS08395;Dbxref=Genbank:WP_044757457.1;Name=WP_044757457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155558.1;locus_tag=IXO1104_RS08395;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_044757457.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1818246 1819121 . - . ID=gene-IXO1104_RS08400;Name=IXO1104_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08400;old_locus_tag=IXO1104_08355 NZ_CP047492.1 Protein Homology CDS 1818246 1819121 . - 0 ID=cds-WP_011258506.1;Parent=gene-IXO1104_RS08400;Dbxref=Genbank:WP_011258506.1;Name=WP_011258506.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159314.1;locus_tag=IXO1104_RS08400;product=TonB family protein;protein_id=WP_011258506.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1819118 1820068 . - . ID=gene-IXO1104_RS08405;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08405;old_locus_tag=IXO1104_08360 NZ_CP047492.1 Protein Homology CDS 1819118 1820068 . - 0 ID=cds-WP_011408182.1;Parent=gene-IXO1104_RS08405;Dbxref=Genbank:WP_011408182.1;Name=WP_011408182.1;Ontology_term=GO:0006750,GO:0004363;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038049.1;locus_tag=IXO1104_RS08405;product=glutathione synthase;protein_id=WP_011408182.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1820318 1820719 . + . ID=gene-IXO1104_RS08410;Name=pilG;gbkey=Gene;gene=pilG;gene_biotype=protein_coding;locus_tag=IXO1104_RS08410;old_locus_tag=IXO1104_08365 NZ_CP047492.1 Protein Homology CDS 1820318 1820719 . + 0 ID=cds-WP_005913706.1;Parent=gene-IXO1104_RS08410;Dbxref=Genbank:WP_005913706.1;Name=WP_005913706.1;gbkey=CDS;gene=pilG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913706.1;locus_tag=IXO1104_RS08410;product=twitching motility response regulator PilG;protein_id=WP_005913706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1820737 1821099 . + . ID=gene-IXO1104_RS08415;Name=IXO1104_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08415;old_locus_tag=IXO1104_08370 NZ_CP047492.1 Protein Homology CDS 1820737 1821099 . + 0 ID=cds-WP_011258508.1;Parent=gene-IXO1104_RS08415;Dbxref=Genbank:WP_011258508.1;Name=WP_011258508.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450735.1;locus_tag=IXO1104_RS08415;product=response regulator;protein_id=WP_011258508.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1821099 1821629 . + . ID=gene-IXO1104_RS08420;Name=IXO1104_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08420;old_locus_tag=IXO1104_08375 NZ_CP047492.1 Protein Homology CDS 1821099 1821629 . + 0 ID=cds-WP_003482487.1;Parent=gene-IXO1104_RS08420;Dbxref=Genbank:WP_003482487.1;Name=WP_003482487.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=IXO1104_RS08420;product=chemotaxis protein CheW;protein_id=WP_003482487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1821669 1823705 . + . ID=gene-IXO1104_RS08425;Name=IXO1104_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08425;old_locus_tag=IXO1104_08380 NZ_CP047492.1 Protein Homology CDS 1821669 1823705 . + 0 ID=cds-WP_011258510.1;Parent=gene-IXO1104_RS08425;Dbxref=Genbank:WP_011258510.1;Name=WP_011258510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988635.1;locus_tag=IXO1104_RS08425;product=methyl-accepting chemotaxis protein;protein_id=WP_011258510.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1823819 1830745 . + . ID=gene-IXO1104_RS08430;Name=IXO1104_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08430;old_locus_tag=IXO1104_08385 NZ_CP047492.1 Protein Homology CDS 1823819 1830745 . + 0 ID=cds-WP_027703400.1;Parent=gene-IXO1104_RS08430;Dbxref=Genbank:WP_027703400.1;Name=WP_027703400.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158585.1;locus_tag=IXO1104_RS08430;product=Hpt domain-containing protein;protein_id=WP_027703400.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1830753 1831955 . + . ID=gene-IXO1104_RS08435;Name=IXO1104_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08435;old_locus_tag=IXO1104_08390 NZ_CP047492.1 Protein Homology CDS 1830753 1831955 . + 0 ID=cds-WP_011408184.1;Parent=gene-IXO1104_RS08435;Dbxref=Genbank:WP_011408184.1;Name=WP_011408184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988631.1;locus_tag=IXO1104_RS08435;product=hypothetical protein;protein_id=WP_011408184.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1831989 1832465 . + . ID=gene-IXO1104_RS08440;Name=IXO1104_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08440;old_locus_tag=IXO1104_08395 NZ_CP047492.1 Protein Homology CDS 1831989 1832465 . + 0 ID=cds-WP_011258512.1;Parent=gene-IXO1104_RS08440;Dbxref=Genbank:WP_011258512.1;Name=WP_011258512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482475.1;locus_tag=IXO1104_RS08440;product=chemotaxis protein CheW;protein_id=WP_011258512.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1832716 1833339 . + . ID=gene-IXO1104_RS08445;Name=IXO1104_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08445;old_locus_tag=IXO1104_08400 NZ_CP047492.1 Protein Homology CDS 1832716 1833339 . + 0 ID=cds-WP_012445323.1;Parent=gene-IXO1104_RS08445;Dbxref=Genbank:WP_012445323.1;Name=WP_012445323.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445323.1;locus_tag=IXO1104_RS08445;product=GNAT family N-acetyltransferase;protein_id=WP_012445323.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1833351 1834433 . - . ID=gene-IXO1104_RS08450;Name=IXO1104_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08450;old_locus_tag=IXO1104_08405 NZ_CP047492.1 Protein Homology CDS 1833351 1834433 . - 0 ID=cds-WP_041182920.1;Parent=gene-IXO1104_RS08450;Dbxref=Genbank:WP_041182920.1;Name=WP_041182920.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=IXO1104_RS08450;product=IS630 family transposase;protein_id=WP_041182920.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1834566 1835885 . - . ID=gene-IXO1104_RS08455;Name=IXO1104_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08455;old_locus_tag=IXO1104_08410 NZ_CP047492.1 Protein Homology CDS 1834566 1835885 . - 0 ID=cds-WP_115862280.1;Parent=gene-IXO1104_RS08455;Dbxref=Genbank:WP_115862280.1;Name=WP_115862280.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS08455;product=IS701 family transposase;protein_id=WP_115862280.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1837139 1837624 . - . ID=gene-IXO1104_RS08460;Name=IXO1104_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08460 NZ_CP047492.1 Protein Homology CDS 1837139 1837624 . - 0 ID=cds-WP_229001931.1;Parent=gene-IXO1104_RS08460;Dbxref=Genbank:WP_229001931.1;Name=WP_229001931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023459.2;locus_tag=IXO1104_RS08460;product=DUF3520 domain-containing protein;protein_id=WP_229001931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1837645 1838646 . - . ID=gene-IXO1104_RS08465;Name=IXO1104_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08465 NZ_CP047492.1 Protein Homology CDS 1837645 1838646 . - 0 ID=cds-WP_229001917.1;Parent=gene-IXO1104_RS08465;Dbxref=Genbank:WP_229001917.1;Name=WP_229001917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258516.1;locus_tag=IXO1104_RS08465;product=von Willebrand factor type A domain-containing protein;protein_id=WP_229001917.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1839153 1840116 . + . ID=gene-IXO1104_RS08470;Name=IXO1104_RS08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08470;old_locus_tag=IXO1104_08420;pseudo=true NZ_CP047492.1 Protein Homology CDS 1839153 1840116 . + 0 ID=cds-IXO1104_RS08470;Parent=gene-IXO1104_RS08470;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS08470;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1840534 1841598 . + . ID=gene-IXO1104_RS08475;Name=IXO1104_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08475;old_locus_tag=IXO1104_08425 NZ_CP047492.1 Protein Homology CDS 1840534 1841598 . + 0 ID=cds-WP_027703766.1;Parent=gene-IXO1104_RS08475;Dbxref=Genbank:WP_027703766.1;Name=WP_027703766.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038037.1;locus_tag=IXO1104_RS08475;product=isoaspartyl peptidase/L-asparaginase;protein_id=WP_027703766.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1841595 1842326 . + . ID=gene-IXO1104_RS08480;Name=IXO1104_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08480;old_locus_tag=IXO1104_08430 NZ_CP047492.1 Protein Homology CDS 1841595 1842326 . + 0 ID=cds-WP_027703765.1;Parent=gene-IXO1104_RS08480;Dbxref=Genbank:WP_027703765.1;Name=WP_027703765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258519.1;locus_tag=IXO1104_RS08480;product=copper homeostasis protein CutC;protein_id=WP_027703765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1842436 1844124 . - . ID=gene-IXO1104_RS08485;Name=IXO1104_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08485;old_locus_tag=IXO1104_08435 NZ_CP047492.1 Protein Homology CDS 1842436 1844124 . - 0 ID=cds-WP_075240635.1;Parent=gene-IXO1104_RS08485;Dbxref=Genbank:WP_075240635.1;Name=WP_075240635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915126.1;locus_tag=IXO1104_RS08485;product=hypothetical protein;protein_id=WP_075240635.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1844477 1845639 . - . ID=gene-IXO1104_RS08490;Name=IXO1104_RS08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08490;old_locus_tag=IXO1104_08440;pseudo=true NZ_CP047492.1 Protein Homology CDS 1844477 1845639 . - 0 ID=cds-IXO1104_RS08490;Parent=gene-IXO1104_RS08490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090770.1;locus_tag=IXO1104_RS08490;product=exo-alpha-sialidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1846019 1846339 . + . ID=gene-IXO1104_RS08495;Name=IXO1104_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08495;old_locus_tag=IXO1104_08445 NZ_CP047492.1 Protein Homology CDS 1846019 1846339 . + 0 ID=cds-WP_075239144.1;Parent=gene-IXO1104_RS08495;Dbxref=Genbank:WP_075239144.1;Name=WP_075239144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155568.1;locus_tag=IXO1104_RS08495;product=RebB family R body protein;protein_id=WP_075239144.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1846397 1846597 . - . ID=gene-IXO1104_RS08500;Name=IXO1104_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08500;old_locus_tag=IXO1104_08450 NZ_CP047492.1 Protein Homology CDS 1846397 1846597 . - 0 ID=cds-WP_011408193.1;Parent=gene-IXO1104_RS08500;Dbxref=Genbank:WP_011408193.1;Name=WP_011408193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408193.1;locus_tag=IXO1104_RS08500;product=hypothetical protein;protein_id=WP_011408193.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1847215 1849746 . + . ID=gene-IXO1104_RS08505;Name=IXO1104_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08505;old_locus_tag=IXO1104_08455 NZ_CP047492.1 Protein Homology CDS 1847215 1849746 . + 0 ID=cds-WP_075239142.1;Parent=gene-IXO1104_RS08505;Dbxref=Genbank:WP_075239142.1;Name=WP_075239142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118055.1;locus_tag=IXO1104_RS08505;product=type III secretion system effector protein;protein_id=WP_075239142.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1849796 1851637 . - . ID=gene-IXO1104_RS08510;Name=IXO1104_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08510;old_locus_tag=IXO1104_08460 NZ_CP047492.1 Protein Homology CDS 1849796 1851637 . - 0 ID=cds-WP_075239141.1;Parent=gene-IXO1104_RS08510;Dbxref=Genbank:WP_075239141.1;Name=WP_075239141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173652.1;locus_tag=IXO1104_RS08510;product=beta-galactosidase;protein_id=WP_075239141.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1851814 1851890 . + . ID=gene-IXO1104_RS08515;Name=IXO1104_RS08515;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS08515;old_locus_tag=IXO1104_08465 NZ_CP047492.1 cmsearch ncRNA 1851814 1851890 . + . ID=rna-IXO1104_RS08515;Parent=gene-IXO1104_RS08515;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08515;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1851814 1851890 . + . ID=exon-IXO1104_RS08515-1;Parent=rna-IXO1104_RS08515;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08515;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1851917 1854259 . - . ID=gene-IXO1104_RS08520;Name=IXO1104_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08520;old_locus_tag=IXO1104_08470 NZ_CP047492.1 Protein Homology CDS 1851917 1854259 . - 0 ID=cds-WP_011408197.1;Parent=gene-IXO1104_RS08520;Dbxref=Genbank:WP_011408197.1;Name=WP_011408197.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155572.1;locus_tag=IXO1104_RS08520;product=GH92 family glycosyl hydrolase;protein_id=WP_011408197.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1854395 1855858 . - . ID=gene-IXO1104_RS08525;Name=IXO1104_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08525;old_locus_tag=IXO1104_08475 NZ_CP047492.1 Protein Homology CDS 1854395 1855858 . - 0 ID=cds-WP_011258527.1;Parent=gene-IXO1104_RS08525;Dbxref=Genbank:WP_011258527.1;Name=WP_011258527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813906.1;locus_tag=IXO1104_RS08525;product=glycoside hydrolase family 125 protein;protein_id=WP_011258527.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1856101 1856397 . + . ID=gene-IXO1104_RS08530;Name=IXO1104_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08530;old_locus_tag=IXO1104_08480 NZ_CP047492.1 GeneMarkS-2+ CDS 1856101 1856397 . + 0 ID=cds-WP_129593110.1;Parent=gene-IXO1104_RS08530;Dbxref=Genbank:WP_129593110.1;Name=WP_129593110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08530;product=hypothetical protein;protein_id=WP_129593110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1856852 1857223 . + . ID=gene-IXO1104_RS08535;Name=IXO1104_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08535;old_locus_tag=IXO1104_08485 NZ_CP047492.1 Protein Homology CDS 1856852 1857223 . + 0 ID=cds-WP_011408199.1;Parent=gene-IXO1104_RS08535;Dbxref=Genbank:WP_011408199.1;Name=WP_011408199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118058.1;locus_tag=IXO1104_RS08535;product=biotin/lipoyl-binding protein;protein_id=WP_011408199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1857225 1857452 . + . ID=gene-IXO1104_RS08540;Name=IXO1104_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08540;old_locus_tag=IXO1104_08490 NZ_CP047492.1 Protein Homology CDS 1857225 1857452 . + 0 ID=cds-WP_033013343.1;Parent=gene-IXO1104_RS08540;Dbxref=Genbank:WP_033013343.1;Name=WP_033013343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376789.1;locus_tag=IXO1104_RS08540;product=hypothetical protein;protein_id=WP_033013343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1857506 1857907 . + . ID=gene-IXO1104_RS08545;Name=IXO1104_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08545;old_locus_tag=IXO1104_08495 NZ_CP047492.1 Protein Homology CDS 1857506 1857907 . + 0 ID=cds-WP_011408200.1;Parent=gene-IXO1104_RS08545;Dbxref=Genbank:WP_011408200.1;Name=WP_011408200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365311.1;locus_tag=IXO1104_RS08545;product=hypothetical protein;protein_id=WP_011408200.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1857985 1858263 . + . ID=gene-IXO1104_RS08550;Name=IXO1104_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08550;old_locus_tag=IXO1104_08500 NZ_CP047492.1 Protein Homology CDS 1857985 1858263 . + 0 ID=cds-WP_012445311.1;Parent=gene-IXO1104_RS08550;Dbxref=Genbank:WP_012445311.1;Name=WP_012445311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113105.1;locus_tag=IXO1104_RS08550;product=hypothetical protein;protein_id=WP_012445311.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1858260 1859504 . + . ID=gene-IXO1104_RS08555;Name=IXO1104_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08555;old_locus_tag=IXO1104_08505 NZ_CP047492.1 Protein Homology CDS 1858260 1859504 . + 0 ID=cds-WP_044756939.1;Parent=gene-IXO1104_RS08555;Dbxref=Genbank:WP_044756939.1;Name=WP_044756939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445310.1;locus_tag=IXO1104_RS08555;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_044756939.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1860053 1860793 . + . ID=gene-IXO1104_RS08560;Name=IXO1104_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08560 NZ_CP047492.1 GeneMarkS-2+ CDS 1860053 1860793 . + 0 ID=cds-WP_229002603.1;Parent=gene-IXO1104_RS08560;Dbxref=Genbank:WP_229002603.1;Name=WP_229002603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08560;product=hypothetical protein;protein_id=WP_229002603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1860945 1861901 . + . ID=gene-IXO1104_RS08565;Name=IXO1104_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08565;old_locus_tag=IXO1104_08515 NZ_CP047492.1 Protein Homology CDS 1860945 1861901 . + 0 ID=cds-WP_011407237.1-4;Parent=gene-IXO1104_RS08565;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS08565;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1862092 1862898 . + . ID=gene-IXO1104_RS08570;Name=IXO1104_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08570;old_locus_tag=IXO1104_08520 NZ_CP047492.1 Protein Homology CDS 1862092 1862898 . + 0 ID=cds-WP_256724855.1;Parent=gene-IXO1104_RS08570;Dbxref=Genbank:WP_256724855.1;Name=WP_256724855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=IXO1104_RS08570;product=rhomboid family intramembrane serine protease;protein_id=WP_256724855.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1862948 1865062 . + . ID=gene-IXO1104_RS08575;Name=IXO1104_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08575;old_locus_tag=IXO1104_08525 NZ_CP047492.1 Protein Homology CDS 1862948 1865062 . + 0 ID=cds-WP_027703411.1;Parent=gene-IXO1104_RS08575;Dbxref=Genbank:WP_027703411.1;Name=WP_027703411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370257.1;locus_tag=IXO1104_RS08575;product=peptidase domain-containing ABC transporter;protein_id=WP_027703411.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1865208 1867877 . - . ID=gene-IXO1104_RS08580;Name=IXO1104_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08580;old_locus_tag=IXO1104_08530 NZ_CP047492.1 Protein Homology CDS 1865208 1867877 . - 0 ID=cds-WP_011408205.1;Parent=gene-IXO1104_RS08580;Dbxref=Genbank:WP_011408205.1;Name=WP_011408205.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155574.1;locus_tag=IXO1104_RS08580;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_011408205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1868082 1870763 . - . ID=gene-IXO1104_RS08585;Name=IXO1104_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08585;old_locus_tag=IXO1104_08535 NZ_CP047492.1 Protein Homology CDS 1868082 1870763 . - 0 ID=cds-WP_027703410.1;Parent=gene-IXO1104_RS08585;Dbxref=Genbank:WP_027703410.1;Name=WP_027703410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504091.1;locus_tag=IXO1104_RS08585;product=glycoside hydrolase family 2 protein;protein_id=WP_027703410.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1870785 1873235 . - . ID=gene-IXO1104_RS08590;Name=IXO1104_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08590;old_locus_tag=IXO1104_08540 NZ_CP047492.1 Protein Homology CDS 1870785 1873235 . - 0 ID=cds-WP_075240533.1;Parent=gene-IXO1104_RS08590;Dbxref=Genbank:WP_075240533.1;Name=WP_075240533.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118915.1;locus_tag=IXO1104_RS08590;product=family 20 glycosylhydrolase;protein_id=WP_075240533.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1873498 1873571 . - . ID=gene-IXO1104_RS08595;Name=IXO1104_RS08595;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS08595;old_locus_tag=IXO1104_08545 NZ_CP047492.1 cmsearch ncRNA 1873498 1873571 . - . ID=rna-IXO1104_RS08595;Parent=gene-IXO1104_RS08595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08595;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1873498 1873571 . - . ID=exon-IXO1104_RS08595-1;Parent=rna-IXO1104_RS08595;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08595;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1873633 1874700 . - . ID=gene-IXO1104_RS08600;Name=IXO1104_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08600;old_locus_tag=IXO1104_08550 NZ_CP047492.1 Protein Homology CDS 1873633 1874700 . - 0 ID=cds-WP_011258536.1;Parent=gene-IXO1104_RS08600;Dbxref=Genbank:WP_011258536.1;Name=WP_011258536.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090759.1;locus_tag=IXO1104_RS08600;product=glycosyl hydrolase family 18 protein;protein_id=WP_011258536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1874704 1876389 . - . ID=gene-IXO1104_RS08605;Name=IXO1104_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08605;old_locus_tag=IXO1104_08555 NZ_CP047492.1 Protein Homology CDS 1874704 1876389 . - 0 ID=cds-WP_075240534.1;Parent=gene-IXO1104_RS08605;Dbxref=Genbank:WP_075240534.1;Name=WP_075240534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161486.1;locus_tag=IXO1104_RS08605;product=alpha-L-fucosidase;protein_id=WP_075240534.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1876597 1879290 . - . ID=gene-IXO1104_RS08610;Name=IXO1104_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08610;old_locus_tag=IXO1104_08560 NZ_CP047492.1 Protein Homology CDS 1876597 1879290 . - 0 ID=cds-WP_075240535.1;Parent=gene-IXO1104_RS08610;Dbxref=Genbank:WP_075240535.1;Name=WP_075240535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164668.1;locus_tag=IXO1104_RS08610;product=TonB-dependent receptor;protein_id=WP_075240535.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1880009 1881007 . + . ID=gene-IXO1104_RS08615;Name=IXO1104_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08615;old_locus_tag=IXO1104_08565 NZ_CP047492.1 Protein Homology CDS 1880009 1881007 . + 0 ID=cds-WP_012445299.1;Parent=gene-IXO1104_RS08615;Dbxref=Genbank:WP_012445299.1;Name=WP_012445299.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988601.1;locus_tag=IXO1104_RS08615;product=glucokinase;protein_id=WP_012445299.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1881309 1882043 . - . ID=gene-IXO1104_RS08620;Name=IXO1104_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08620;old_locus_tag=IXO1104_08570 NZ_CP047492.1 Protein Homology CDS 1881309 1882043 . - 0 ID=cds-WP_012445298.1;Parent=gene-IXO1104_RS08620;Dbxref=Genbank:WP_012445298.1;Name=WP_012445298.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931477.1;locus_tag=IXO1104_RS08620;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_012445298.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1882034 1883452 . - . ID=gene-IXO1104_RS08625;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08625;old_locus_tag=IXO1104_08575 NZ_CP047492.1 Protein Homology CDS 1882034 1883452 . - 0 ID=cds-WP_075239782.1;Parent=gene-IXO1104_RS08625;Dbxref=Genbank:WP_075239782.1;Name=WP_075239782.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851465.1;locus_tag=IXO1104_RS08625;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_075239782.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1883494 1884042 . + . ID=gene-IXO1104_RS08630;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=IXO1104_RS08630;old_locus_tag=IXO1104_08580 NZ_CP047492.1 Protein Homology CDS 1883494 1884042 . + 0 ID=cds-WP_012445296.1;Parent=gene-IXO1104_RS08630;Dbxref=Genbank:WP_012445296.1;Name=WP_012445296.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090754.1;locus_tag=IXO1104_RS08630;product=ADP compounds hydrolase NudE;protein_id=WP_012445296.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1884039 1884839 . + . ID=gene-IXO1104_RS08635;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS08635;old_locus_tag=IXO1104_08585 NZ_CP047492.1 Protein Homology CDS 1884039 1884839 . + 0 ID=cds-WP_012445295.1;Parent=gene-IXO1104_RS08635;Dbxref=Genbank:WP_012445295.1;Name=WP_012445295.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811298.1;locus_tag=IXO1104_RS08635;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_012445295.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1885082 1886101 . + . ID=gene-IXO1104_RS08640;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=IXO1104_RS08640;old_locus_tag=IXO1104_08590 NZ_CP047492.1 Protein Homology CDS 1885082 1886101 . + 0 ID=cds-WP_011408214.1;Parent=gene-IXO1104_RS08640;Dbxref=Genbank:WP_011408214.1;Name=WP_011408214.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851467.1;locus_tag=IXO1104_RS08640;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_011408214.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1886098 1886435 . + . ID=gene-IXO1104_RS08645;Name=IXO1104_RS08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08645;old_locus_tag=IXO1104_08595;pseudo=true NZ_CP047492.1 Protein Homology CDS 1886098 1886435 . + 0 ID=cds-IXO1104_RS08645;Parent=gene-IXO1104_RS08645;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482423.1;locus_tag=IXO1104_RS08645;product=YnfA family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1886528 1886604 . - . ID=gene-IXO1104_RS08650;Name=IXO1104_RS08650;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS08650;old_locus_tag=IXO1104_08600 NZ_CP047492.1 cmsearch ncRNA 1886528 1886604 . - . ID=rna-IXO1104_RS08650;Parent=gene-IXO1104_RS08650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08650;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1886528 1886604 . - . ID=exon-IXO1104_RS08650-1;Parent=rna-IXO1104_RS08650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS08650;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1886733 1887698 . + . ID=gene-IXO1104_RS08655;Name=IXO1104_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08655;old_locus_tag=IXO1104_08605 NZ_CP047492.1 Protein Homology CDS 1886733 1887698 . + 0 ID=cds-WP_075239781.1;Parent=gene-IXO1104_RS08655;Dbxref=Genbank:WP_075239781.1;Name=WP_075239781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237420.1;locus_tag=IXO1104_RS08655;product=SPFH/Band 7/PHB domain protein;protein_id=WP_075239781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1887702 1888136 . + . ID=gene-IXO1104_RS08660;Name=IXO1104_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08660;old_locus_tag=IXO1104_08610 NZ_CP047492.1 Protein Homology CDS 1887702 1888136 . + 0 ID=cds-WP_012445293.1;Parent=gene-IXO1104_RS08660;Dbxref=Genbank:WP_012445293.1;Name=WP_012445293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113316.1;locus_tag=IXO1104_RS08660;product=NfeD family protein;protein_id=WP_012445293.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1888309 1889418 . + . ID=gene-IXO1104_RS08665;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=IXO1104_RS08665;old_locus_tag=IXO1104_08615 NZ_CP047492.1 Protein Homology CDS 1888309 1889418 . + 0 ID=cds-WP_069964920.1;Parent=gene-IXO1104_RS08665;Dbxref=Genbank:WP_069964920.1;Name=WP_069964920.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931494.1;locus_tag=IXO1104_RS08665;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_069964920.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1889555 1889950 . + . ID=gene-IXO1104_RS08670;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=IXO1104_RS08670;old_locus_tag=IXO1104_08620 NZ_CP047492.1 Protein Homology CDS 1889555 1889950 . + 0 ID=cds-WP_011258549.1;Parent=gene-IXO1104_RS08670;Dbxref=Genbank:WP_011258549.1;Name=WP_011258549.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368686.1;locus_tag=IXO1104_RS08670;product=glycine cleavage system protein GcvH;protein_id=WP_011258549.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1890332 1890607 . - . ID=gene-IXO1104_RS08675;Name=IXO1104_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08675;old_locus_tag=IXO1104_08625 NZ_CP047492.1 GeneMarkS-2+ CDS 1890332 1890607 . - 0 ID=cds-WP_082322925.1;Parent=gene-IXO1104_RS08675;Dbxref=Genbank:WP_082322925.1;Name=WP_082322925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08675;product=hypothetical protein;protein_id=WP_082322925.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1890961 1891380 . - . ID=gene-IXO1104_RS08680;Name=IXO1104_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08680 NZ_CP047492.1 Protein Homology CDS 1890961 1891380 . - 0 ID=cds-WP_027703405.1;Parent=gene-IXO1104_RS08680;Dbxref=Genbank:WP_027703405.1;Name=WP_027703405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116305.1;locus_tag=IXO1104_RS08680;product=hypothetical protein;protein_id=WP_027703405.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1892319 1893662 . - . ID=gene-IXO1104_RS08685;Name=IXO1104_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08685;old_locus_tag=IXO1104_08635 NZ_CP047492.1 Protein Homology CDS 1892319 1893662 . - 0 ID=cds-WP_012445290.1;Parent=gene-IXO1104_RS08685;Dbxref=Genbank:WP_012445290.1;Name=WP_012445290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504072.1;locus_tag=IXO1104_RS08685;product=serine hydrolase;protein_id=WP_012445290.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1893775 1893948 . + . ID=gene-IXO1104_RS08690;Name=IXO1104_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08690;old_locus_tag=IXO1104_08640 NZ_CP047492.1 GeneMarkS-2+ CDS 1893775 1893948 . + 0 ID=cds-WP_153296747.1;Parent=gene-IXO1104_RS08690;Dbxref=Genbank:WP_153296747.1;Name=WP_153296747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08690;product=hypothetical protein;protein_id=WP_153296747.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1894027 1895385 . + . ID=gene-IXO1104_RS08695;Name=IXO1104_RS08695;end_range=1895385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08695;old_locus_tag=IXO1104_08645;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1894027 1895385 . + 0 ID=cds-IXO1104_RS08695;Parent=gene-IXO1104_RS08695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=1895385,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849238.1;locus_tag=IXO1104_RS08695;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1895673 1896026 . + . ID=gene-IXO1104_RS08700;Name=IXO1104_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08700;old_locus_tag=IXO1104_08650 NZ_CP047492.1 Protein Homology CDS 1895673 1896026 . + 0 ID=cds-WP_011408219.1;Parent=gene-IXO1104_RS08700;Dbxref=Genbank:WP_011408219.1;Name=WP_011408219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302742.1;locus_tag=IXO1104_RS08700;product=DUF1304 domain-containing protein;protein_id=WP_011408219.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1896421 1898895 . - . ID=gene-IXO1104_RS08705;Name=IXO1104_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08705;old_locus_tag=IXO1104_08655 NZ_CP047492.1 Protein Homology CDS 1896421 1898895 . - 0 ID=cds-WP_027703404.1;Parent=gene-IXO1104_RS08705;Dbxref=Genbank:WP_027703404.1;Name=WP_027703404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090746.1;locus_tag=IXO1104_RS08705;product=acyl-CoA dehydrogenase;protein_id=WP_027703404.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1898892 1899785 . - . ID=gene-IXO1104_RS08710;Name=IXO1104_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08710;old_locus_tag=IXO1104_08660 NZ_CP047492.1 Protein Homology CDS 1898892 1899785 . - 0 ID=cds-WP_075239780.1;Parent=gene-IXO1104_RS08710;Dbxref=Genbank:WP_075239780.1;Name=WP_075239780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166286.1;locus_tag=IXO1104_RS08710;product=alpha/beta hydrolase;protein_id=WP_075239780.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1899922 1900530 . + . ID=gene-IXO1104_RS08715;Name=IXO1104_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08715;old_locus_tag=IXO1104_08665 NZ_CP047492.1 Protein Homology CDS 1899922 1900530 . + 0 ID=cds-WP_011408222.1;Parent=gene-IXO1104_RS08715;Dbxref=Genbank:WP_011408222.1;Name=WP_011408222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988563.1;locus_tag=IXO1104_RS08715;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011408222.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1900639 1903548 . - . ID=gene-IXO1104_RS08720;Name=IXO1104_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08720;old_locus_tag=IXO1104_08670 NZ_CP047492.1 Protein Homology CDS 1900639 1903548 . - 0 ID=cds-WP_011408223.1;Parent=gene-IXO1104_RS08720;Dbxref=Genbank:WP_011408223.1;Name=WP_011408223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258556.1;locus_tag=IXO1104_RS08720;product=TonB-dependent receptor;protein_id=WP_011408223.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1903796 1904632 . - . ID=gene-IXO1104_RS08725;Name=IXO1104_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08725;old_locus_tag=IXO1104_08675 NZ_CP047492.1 Protein Homology CDS 1903796 1904632 . - 0 ID=cds-WP_027703402.1;Parent=gene-IXO1104_RS08725;Dbxref=Genbank:WP_027703402.1;Name=WP_027703402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572079.1;locus_tag=IXO1104_RS08725;product=hypothetical protein;protein_id=WP_027703402.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1904786 1905676 . - . ID=gene-IXO1104_RS08730;Name=IXO1104_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08730;old_locus_tag=IXO1104_08680 NZ_CP047492.1 Protein Homology CDS 1904786 1905676 . - 0 ID=cds-WP_012445286.1;Parent=gene-IXO1104_RS08730;Dbxref=Genbank:WP_012445286.1;Name=WP_012445286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368716.1;locus_tag=IXO1104_RS08730;product=Hsp33 family molecular chaperone HslO;protein_id=WP_012445286.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1905751 1906488 . + . ID=gene-IXO1104_RS08735;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08735;old_locus_tag=IXO1104_08685 NZ_CP047492.1 Protein Homology CDS 1905751 1906488 . + 0 ID=cds-WP_011258559.1;Parent=gene-IXO1104_RS08735;Dbxref=Genbank:WP_011258559.1;Name=WP_011258559.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037989.1;locus_tag=IXO1104_RS08735;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_011258559.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1906491 1907537 . + . ID=gene-IXO1104_RS08740;Name=IXO1104_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08740;old_locus_tag=IXO1104_08690 NZ_CP047492.1 Protein Homology CDS 1906491 1907537 . + 0 ID=cds-WP_011408225.1;Parent=gene-IXO1104_RS08740;Dbxref=Genbank:WP_011408225.1;Name=WP_011408225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157863.1;locus_tag=IXO1104_RS08740;product=glycosyltransferase family 2 protein;protein_id=WP_011408225.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1907497 1907925 . + . ID=gene-IXO1104_RS08745;Name=IXO1104_RS08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08745;old_locus_tag=IXO1104_08695;pseudo=true NZ_CP047492.1 Protein Homology CDS 1907497 1907925 . + 0 ID=cds-IXO1104_RS08745;Parent=gene-IXO1104_RS08745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090742.1;locus_tag=IXO1104_RS08745;product=CBS domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1908057 1908398 . - . ID=gene-IXO1104_RS08750;Name=IXO1104_RS08750;end_range=1908398,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08750;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1908057 1908398 . - 0 ID=cds-IXO1104_RS08750;Parent=gene-IXO1104_RS08750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1908398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=IXO1104_RS08750;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1908398 1909221 . - . ID=gene-IXO1104_RS08755;Name=IXO1104_RS08755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08755;old_locus_tag=IXO1104_08700;partial=true;pseudo=true;start_range=.,1908398 NZ_CP047492.1 Protein Homology CDS 1908398 1909221 . - 0 ID=cds-IXO1104_RS08755;Parent=gene-IXO1104_RS08755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508524.1;locus_tag=IXO1104_RS08755;partial=true;product=AsmA family protein;pseudo=true;start_range=.,1908398;transl_table=11 NZ_CP047492.1 RefSeq gene 1909228 1909350 . - . ID=gene-IXO1104_RS08760;Name=IXO1104_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08760;old_locus_tag=IXO1104_08705 NZ_CP047492.1 GeneMarkS-2+ CDS 1909228 1909350 . - 0 ID=cds-WP_012445281.1;Parent=gene-IXO1104_RS08760;Dbxref=Genbank:WP_012445281.1;Name=WP_012445281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS08760;product=hypothetical protein;protein_id=WP_012445281.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1909409 1910053 . - . ID=gene-IXO1104_RS08765;Name=IXO1104_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08765;old_locus_tag=IXO1104_08710 NZ_CP047492.1 Protein Homology CDS 1909409 1910053 . - 0 ID=cds-WP_011258564.1;Parent=gene-IXO1104_RS08765;Dbxref=Genbank:WP_011258564.1;Name=WP_011258564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301897.1;locus_tag=IXO1104_RS08765;product=hemolysin III family protein;protein_id=WP_011258564.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1910129 1911733 . - . ID=gene-IXO1104_RS08770;Name=IXO1104_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08770;old_locus_tag=IXO1104_08715 NZ_CP047492.1 Protein Homology CDS 1910129 1911733 . - 0 ID=cds-WP_011258565.1;Parent=gene-IXO1104_RS08770;Dbxref=Genbank:WP_011258565.1;Name=WP_011258565.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157859.1;locus_tag=IXO1104_RS08770;product=peptide chain release factor 3;protein_id=WP_011258565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1911866 1912765 . - . ID=gene-IXO1104_RS08775;Name=IXO1104_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08775;old_locus_tag=IXO1104_08720 NZ_CP047492.1 Protein Homology CDS 1911866 1912765 . - 0 ID=cds-WP_027703327.1;Parent=gene-IXO1104_RS08775;Dbxref=Genbank:WP_027703327.1;Name=WP_027703327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348199.1;locus_tag=IXO1104_RS08775;product=M23 family metallopeptidase;protein_id=WP_027703327.1;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 1912894 1913013 . + . ID=id-NZ_CP047492.1:1912894..1913013;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 1913084 1914115 . + . ID=gene-IXO1104_RS08780;Name=IXO1104_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08780;old_locus_tag=IXO1104_08725 NZ_CP047492.1 Protein Homology CDS 1913084 1914115 . + 0 ID=cds-WP_027703328.1;Parent=gene-IXO1104_RS08780;Dbxref=Genbank:WP_027703328.1;Name=WP_027703328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348198.1;locus_tag=IXO1104_RS08780;product=homoserine O-succinyltransferase;protein_id=WP_027703328.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1914112 1915329 . + . ID=gene-IXO1104_RS08785;Name=IXO1104_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08785;old_locus_tag=IXO1104_08730 NZ_CP047492.1 Protein Homology CDS 1914112 1915329 . + 0 ID=cds-WP_075239779.1;Parent=gene-IXO1104_RS08785;Dbxref=Genbank:WP_075239779.1;Name=WP_075239779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157856.1;locus_tag=IXO1104_RS08785;product=O-succinylhomoserine (thiol)-lyase;protein_id=WP_075239779.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1915326 1916421 . + . ID=gene-IXO1104_RS08790;Name=IXO1104_RS08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08790;old_locus_tag=IXO1104_08735;pseudo=true NZ_CP047492.1 Protein Homology CDS 1915326 1916421 . + 0 ID=cds-IXO1104_RS08790;Parent=gene-IXO1104_RS08790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967946.1;locus_tag=IXO1104_RS08790;product=homoserine dehydrogenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1917095 1918477 . - . ID=gene-IXO1104_RS08795;Name=IXO1104_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08795;old_locus_tag=IXO1104_08740 NZ_CP047492.1 Protein Homology CDS 1917095 1918477 . - 0 ID=cds-WP_011258570.1;Parent=gene-IXO1104_RS08795;Dbxref=Genbank:WP_011258570.1;Name=WP_011258570.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161485.1;locus_tag=IXO1104_RS08795;product=L-serine ammonia-lyase;protein_id=WP_011258570.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1918565 1918798 . + . ID=gene-IXO1104_RS08800;Name=IXO1104_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08800;old_locus_tag=IXO1104_08745 NZ_CP047492.1 Protein Homology CDS 1918565 1918798 . + 0 ID=cds-WP_011408231.1;Parent=gene-IXO1104_RS08800;Dbxref=Genbank:WP_011408231.1;Name=WP_011408231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408231.1;locus_tag=IXO1104_RS08800;product=glutaredoxin family protein;protein_id=WP_011408231.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1918884 1919156 . - . ID=gene-IXO1104_RS08805;Name=IXO1104_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08805;old_locus_tag=IXO1104_08750 NZ_CP047492.1 Protein Homology CDS 1918884 1919156 . - 0 ID=cds-WP_228329744.1;Parent=gene-IXO1104_RS08805;Dbxref=Genbank:WP_228329744.1;Name=WP_228329744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017691.2;locus_tag=IXO1104_RS08805;product=excalibur calcium-binding domain-containing protein;protein_id=WP_228329744.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1919598 1920167 . - . ID=gene-IXO1104_RS08810;Name=IXO1104_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08810;old_locus_tag=IXO1104_08755 NZ_CP047492.1 Protein Homology CDS 1919598 1920167 . - 0 ID=cds-WP_011258573.1;Parent=gene-IXO1104_RS08810;Dbxref=Genbank:WP_011258573.1;Name=WP_011258573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504047.1;locus_tag=IXO1104_RS08810;product=YceI family protein;protein_id=WP_011258573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1920177 1920740 . - . ID=gene-IXO1104_RS08815;Name=IXO1104_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08815;old_locus_tag=IXO1104_08760 NZ_CP047492.1 Protein Homology CDS 1920177 1920740 . - 0 ID=cds-WP_011258574.1;Parent=gene-IXO1104_RS08815;Dbxref=Genbank:WP_011258574.1;Name=WP_011258574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157851.1;locus_tag=IXO1104_RS08815;product=cytochrome b;protein_id=WP_011258574.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1920737 1921399 . - . ID=gene-IXO1104_RS08820;Name=IXO1104_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08820;old_locus_tag=IXO1104_08765 NZ_CP047492.1 Protein Homology CDS 1920737 1921399 . - 0 ID=cds-WP_027703329.1;Parent=gene-IXO1104_RS08820;Dbxref=Genbank:WP_027703329.1;Name=WP_027703329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967939.1;locus_tag=IXO1104_RS08820;product=YceI family protein;protein_id=WP_027703329.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1921496 1925071 . + . ID=gene-IXO1104_RS08825;Name=IXO1104_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08825;old_locus_tag=IXO1104_08770 NZ_CP047492.1 Protein Homology CDS 1921496 1925071 . + 0 ID=cds-WP_012445274.1;Parent=gene-IXO1104_RS08825;Dbxref=Genbank:WP_012445274.1;Name=WP_012445274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167533.1;locus_tag=IXO1104_RS08825;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_012445274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1925367 1928924 . + . ID=gene-IXO1104_RS08830;Name=IXO1104_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08830;old_locus_tag=IXO1104_08775 NZ_CP047492.1 Protein Homology CDS 1925367 1928924 . + 0 ID=cds-WP_075239778.1;Parent=gene-IXO1104_RS08830;Dbxref=Genbank:WP_075239778.1;Name=WP_075239778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445273.1;locus_tag=IXO1104_RS08830;product=ATP-binding protein;protein_id=WP_075239778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1928990 1932571 . + . ID=gene-IXO1104_RS08835;Name=IXO1104_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08835;old_locus_tag=IXO1104_08780 NZ_CP047492.1 Protein Homology CDS 1928990 1932571 . + 0 ID=cds-WP_080256600.1;Parent=gene-IXO1104_RS08835;Dbxref=Genbank:WP_080256600.1;Name=WP_080256600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437751.1;locus_tag=IXO1104_RS08835;product=ATP-binding protein;protein_id=WP_080256600.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1932596 1932796 . - . ID=gene-IXO1104_RS08840;Name=IXO1104_RS08840;end_range=1932796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08840;old_locus_tag=IXO1104_08785;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1932596 1932796 . - 0 ID=cds-IXO1104_RS08840;Parent=gene-IXO1104_RS08840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1932796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157844.1;locus_tag=IXO1104_RS08840;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1932887 1933490 . + . ID=gene-IXO1104_RS08845;Name=IXO1104_RS08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08845;old_locus_tag=IXO1104_08790;pseudo=true NZ_CP047492.1 Protein Homology CDS 1932887 1933490 . + 0 ID=cds-IXO1104_RS08845;Parent=gene-IXO1104_RS08845;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611849.1;locus_tag=IXO1104_RS08845;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1933538 1933914 . - . ID=gene-IXO1104_RS08850;Name=IXO1104_RS08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08850;old_locus_tag=IXO1104_08795;partial=true;pseudo=true;start_range=.,1933538 NZ_CP047492.1 Protein Homology CDS 1933538 1933914 . - 0 ID=cds-IXO1104_RS08850;Parent=gene-IXO1104_RS08850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS08850;partial=true;product=transposase;pseudo=true;start_range=.,1933538;transl_table=11 NZ_CP047492.1 RefSeq gene 1934102 1936033 . + . ID=gene-IXO1104_RS08855;Name=IXO1104_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08855;old_locus_tag=IXO1104_08800 NZ_CP047492.1 Protein Homology CDS 1934102 1936033 . + 0 ID=cds-WP_075239777.1;Parent=gene-IXO1104_RS08855;Dbxref=Genbank:WP_075239777.1;Name=WP_075239777.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449168.1;locus_tag=IXO1104_RS08855;product=alpha-L-fucosidase;protein_id=WP_075239777.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1936200 1936553 . + . ID=gene-IXO1104_RS08860;Name=IXO1104_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08860;old_locus_tag=IXO1104_08805 NZ_CP047492.1 Protein Homology CDS 1936200 1936553 . + 0 ID=cds-WP_011408237.1;Parent=gene-IXO1104_RS08860;Dbxref=Genbank:WP_011408237.1;Name=WP_011408237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155583.1;locus_tag=IXO1104_RS08860;product=hypothetical protein;protein_id=WP_011408237.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1936792 1937599 . - . ID=gene-IXO1104_RS08865;Name=IXO1104_RS08865;end_range=1937599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08865;old_locus_tag=IXO1104_08810;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1936792 1937599 . - 0 ID=cds-IXO1104_RS08865;Parent=gene-IXO1104_RS08865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1937599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171532.1;locus_tag=IXO1104_RS08865;partial=true;product=DUF4982 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1937594 1937983 . - . ID=gene-IXO1104_RS08870;Name=IXO1104_RS08870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08870;old_locus_tag=IXO1104_08815;partial=true;pseudo=true;start_range=.,1937594 NZ_CP047492.1 Protein Homology CDS 1937594 1937983 . - 0 ID=cds-IXO1104_RS08870;Parent=gene-IXO1104_RS08870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050835.1;locus_tag=IXO1104_RS08870;partial=true;product=arabinogalactan endo-1%2C4-beta-galactosidase;pseudo=true;start_range=.,1937594;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1938218 1939679 . - . ID=gene-IXO1104_RS08875;Name=IXO1104_RS08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS08875;old_locus_tag=IXO1104_08820;pseudo=true NZ_CP047492.1 Protein Homology CDS 1938218 1939679 . - 0 ID=cds-IXO1104_RS08875;Parent=gene-IXO1104_RS08875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488248.1;locus_tag=IXO1104_RS08875;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1940016 1941401 . - . ID=gene-IXO1104_RS08880;Name=IXO1104_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08880;old_locus_tag=IXO1104_08825 NZ_CP047492.1 Protein Homology CDS 1940016 1941401 . - 0 ID=cds-WP_012445263.1;Parent=gene-IXO1104_RS08880;Dbxref=Genbank:WP_012445263.1;Name=WP_012445263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931112.1;locus_tag=IXO1104_RS08880;product=helix-turn-helix transcriptional regulator;protein_id=WP_012445263.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1941540 1943045 . + . ID=gene-IXO1104_RS08885;Name=IXO1104_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08885;old_locus_tag=IXO1104_08830 NZ_CP047492.1 Protein Homology CDS 1941540 1943045 . + 0 ID=cds-WP_027703335.1;Parent=gene-IXO1104_RS08885;Dbxref=Genbank:WP_027703335.1;Name=WP_027703335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155588.1;locus_tag=IXO1104_RS08885;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_027703335.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1943056 1944237 . + . ID=gene-IXO1104_RS08890;Name=IXO1104_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08890;old_locus_tag=IXO1104_08835 NZ_CP047492.1 Protein Homology CDS 1943056 1944237 . + 0 ID=cds-WP_011408244.1;Parent=gene-IXO1104_RS08890;Dbxref=Genbank:WP_011408244.1;Name=WP_011408244.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303549.1;locus_tag=IXO1104_RS08890;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011408244.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1944234 1945031 . + . ID=gene-IXO1104_RS08895;Name=IXO1104_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08895;old_locus_tag=IXO1104_08840 NZ_CP047492.1 Protein Homology CDS 1944234 1945031 . + 0 ID=cds-WP_012445261.1;Parent=gene-IXO1104_RS08895;Dbxref=Genbank:WP_012445261.1;Name=WP_012445261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445261.1;locus_tag=IXO1104_RS08895;product=enoyl-CoA hydratase;protein_id=WP_012445261.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1945031 1946203 . + . ID=gene-IXO1104_RS08900;Name=IXO1104_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08900;old_locus_tag=IXO1104_08845 NZ_CP047492.1 Protein Homology CDS 1945031 1946203 . + 0 ID=cds-WP_075240536.1;Parent=gene-IXO1104_RS08900;Dbxref=Genbank:WP_075240536.1;Name=WP_075240536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155591.1;locus_tag=IXO1104_RS08900;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_075240536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1946363 1947265 . + . ID=gene-IXO1104_RS08905;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08905;old_locus_tag=IXO1104_08850 NZ_CP047492.1 Protein Homology CDS 1946363 1947265 . + 0 ID=cds-WP_027703337.1;Parent=gene-IXO1104_RS08905;Dbxref=Genbank:WP_027703337.1;Name=WP_027703337.1;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118158.1;locus_tag=IXO1104_RS08905;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_027703337.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1947504 1948469 . + . ID=gene-IXO1104_RS08910;Name=IXO1104_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08910;old_locus_tag=IXO1104_08855 NZ_CP047492.1 Protein Homology CDS 1947504 1948469 . + 0 ID=cds-WP_027703338.1;Parent=gene-IXO1104_RS08910;Dbxref=Genbank:WP_027703338.1;Name=WP_027703338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488234.1;locus_tag=IXO1104_RS08910;product=cation diffusion facilitator family transporter;protein_id=WP_027703338.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1948686 1950767 . - . ID=gene-IXO1104_RS08915;Name=IXO1104_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08915;old_locus_tag=IXO1104_08860 NZ_CP047492.1 Protein Homology CDS 1948686 1950767 . - 0 ID=cds-WP_075240537.1;Parent=gene-IXO1104_RS08915;Dbxref=Genbank:WP_075240537.1;Name=WP_075240537.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159518.1;locus_tag=IXO1104_RS08915;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_075240537.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1951004 1951624 . + . ID=gene-IXO1104_RS08920;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=IXO1104_RS08920;old_locus_tag=IXO1104_08865 NZ_CP047492.1 Protein Homology CDS 1951004 1951624 . + 0 ID=cds-WP_012445256.1;Parent=gene-IXO1104_RS08920;Dbxref=Genbank:WP_012445256.1;Name=WP_012445256.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962205.1;locus_tag=IXO1104_RS08920;product=RNA polymerase sigma factor RpoE;protein_id=WP_012445256.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1951621 1952511 . + . ID=gene-IXO1104_RS08925;Name=IXO1104_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08925;old_locus_tag=IXO1104_08870 NZ_CP047492.1 Protein Homology CDS 1951621 1952511 . + 0 ID=cds-WP_012445255.1;Parent=gene-IXO1104_RS08925;Dbxref=Genbank:WP_012445255.1;Name=WP_012445255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159519.1;locus_tag=IXO1104_RS08925;product=sigma-E factor negative regulatory protein;protein_id=WP_012445255.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1952621 1954207 . + . ID=gene-IXO1104_RS08930;Name=IXO1104_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08930;old_locus_tag=IXO1104_08875 NZ_CP047492.1 Protein Homology CDS 1952621 1954207 . + 0 ID=cds-WP_011408249.1;Parent=gene-IXO1104_RS08930;Dbxref=Genbank:WP_011408249.1;Name=WP_011408249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160027.1;locus_tag=IXO1104_RS08930;product=DegQ family serine endoprotease;protein_id=WP_011408249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1954388 1956178 . + . ID=gene-IXO1104_RS08935;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=IXO1104_RS08935;old_locus_tag=IXO1104_08880 NZ_CP047492.1 Protein Homology CDS 1954388 1956178 . + 0 ID=cds-WP_012445254.1;Parent=gene-IXO1104_RS08935;Dbxref=Genbank:WP_012445254.1;Name=WP_012445254.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300425.1;locus_tag=IXO1104_RS08935;product=translation elongation factor 4;protein_id=WP_012445254.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1956285 1957085 . + . ID=gene-IXO1104_RS08940;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=IXO1104_RS08940;old_locus_tag=IXO1104_08885 NZ_CP047492.1 Protein Homology CDS 1956285 1957085 . + 0 ID=cds-WP_011258600.1;Parent=gene-IXO1104_RS08940;Dbxref=Genbank:WP_011258600.1;Name=WP_011258600.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155604.1;locus_tag=IXO1104_RS08940;product=signal peptidase I;protein_id=WP_011258600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1957116 1957493 . + . ID=gene-IXO1104_RS08945;Name=IXO1104_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08945;old_locus_tag=IXO1104_08890 NZ_CP047492.1 Protein Homology CDS 1957116 1957493 . + 0 ID=cds-WP_011258601.1;Parent=gene-IXO1104_RS08945;Dbxref=Genbank:WP_011258601.1;Name=WP_011258601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050845.1;locus_tag=IXO1104_RS08945;product=DUF4845 domain-containing protein;protein_id=WP_011258601.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1957483 1958163 . + . ID=gene-IXO1104_RS08950;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=IXO1104_RS08950;old_locus_tag=IXO1104_08895 NZ_CP047492.1 Protein Homology CDS 1957483 1958163 . + 0 ID=cds-WP_075239775.1;Parent=gene-IXO1104_RS08950;Dbxref=Genbank:WP_075239775.1;Name=WP_075239775.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445253.1;locus_tag=IXO1104_RS08950;product=ribonuclease III;protein_id=WP_075239775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1958160 1959059 . + . ID=gene-IXO1104_RS08955;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=IXO1104_RS08955;old_locus_tag=IXO1104_08900 NZ_CP047492.1 Protein Homology CDS 1958160 1959059 . + 0 ID=cds-WP_011258603.1;Parent=gene-IXO1104_RS08955;Dbxref=Genbank:WP_011258603.1;Name=WP_011258603.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921522.1;locus_tag=IXO1104_RS08955;product=GTPase Era;protein_id=WP_011258603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1959283 1960005 . + . ID=gene-IXO1104_RS08960;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=IXO1104_RS08960;old_locus_tag=IXO1104_08905 NZ_CP047492.1 Protein Homology CDS 1959283 1960005 . + 0 ID=cds-WP_011258604.1;Parent=gene-IXO1104_RS08960;Dbxref=Genbank:WP_011258604.1;Name=WP_011258604.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=IXO1104_RS08960;product=DNA repair protein RecO;protein_id=WP_011258604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1960154 1960876 . - . ID=gene-IXO1104_RS08965;Name=IXO1104_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08965;old_locus_tag=IXO1104_08910 NZ_CP047492.1 Protein Homology CDS 1960154 1960876 . - 0 ID=cds-WP_011408250.1;Parent=gene-IXO1104_RS08965;Dbxref=Genbank:WP_011408250.1;Name=WP_011408250.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258605.1;locus_tag=IXO1104_RS08965;product=response regulator;protein_id=WP_011408250.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1961035 1962369 . + . ID=gene-IXO1104_RS08970;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=IXO1104_RS08970;old_locus_tag=IXO1104_08915 NZ_CP047492.1 Protein Homology CDS 1961035 1962369 . + 0 ID=cds-WP_027703339.1;Parent=gene-IXO1104_RS08970;Dbxref=Genbank:WP_027703339.1;Name=WP_027703339.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380519.1;locus_tag=IXO1104_RS08970;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_027703339.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1962544 1963041 . + . ID=gene-IXO1104_RS08975;Name=IXO1104_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08975;old_locus_tag=IXO1104_08920 NZ_CP047492.1 Protein Homology CDS 1962544 1963041 . + 0 ID=cds-WP_011258607.1;Parent=gene-IXO1104_RS08975;Dbxref=Genbank:WP_011258607.1;Name=WP_011258607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303536.1;locus_tag=IXO1104_RS08975;product=CYTH domain-containing protein;protein_id=WP_011258607.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1963137 1964372 . - . ID=gene-IXO1104_RS08980;Name=IXO1104_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08980;old_locus_tag=IXO1104_08925 NZ_CP047492.1 Protein Homology CDS 1963137 1964372 . - 0 ID=cds-WP_011257310.1;Parent=gene-IXO1104_RS08980;Dbxref=Genbank:WP_011257310.1;Name=WP_011257310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS08980;product=ISL3 family transposase;protein_id=WP_011257310.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1964601 1965977 . + . ID=gene-IXO1104_RS08985;Name=IXO1104_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08985;old_locus_tag=IXO1104_08930 NZ_CP047492.1 Protein Homology CDS 1964601 1965977 . + 0 ID=cds-WP_263117931.1;Parent=gene-IXO1104_RS08985;Dbxref=Genbank:WP_263117931.1;Name=WP_263117931.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1104_RS08985;product=IS5 family transposase;protein_id=WP_263117931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1966097 1966780 . + . ID=gene-IXO1104_RS08990;Name=IXO1104_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08990;old_locus_tag=IXO1104_08935 NZ_CP047492.1 Protein Homology CDS 1966097 1966780 . + 0 ID=cds-WP_041182416.1;Parent=gene-IXO1104_RS08990;Dbxref=Genbank:WP_041182416.1;Name=WP_041182416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155610.1;locus_tag=IXO1104_RS08990;product=DsbA family oxidoreductase;protein_id=WP_041182416.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1966797 1967831 . + . ID=gene-IXO1104_RS08995;Name=IXO1104_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS08995;old_locus_tag=IXO1104_08940 NZ_CP047492.1 Protein Homology CDS 1966797 1967831 . + 0 ID=cds-WP_012445246.1;Parent=gene-IXO1104_RS08995;Dbxref=Genbank:WP_012445246.1;Name=WP_012445246.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155611.1;locus_tag=IXO1104_RS08995;product=FAD-dependent oxidoreductase;protein_id=WP_012445246.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1968012 1969589 . + . ID=gene-IXO1104_RS09000;Name=IXO1104_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09000;old_locus_tag=IXO1104_08945 NZ_CP047492.1 Protein Homology CDS 1968012 1969589 . + 0 ID=cds-WP_012445245.1;Parent=gene-IXO1104_RS09000;Dbxref=Genbank:WP_012445245.1;Name=WP_012445245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174064.1;locus_tag=IXO1104_RS09000;product=cryptochrome/photolyase family protein;protein_id=WP_012445245.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1969706 1970710 . + . ID=gene-IXO1104_RS09005;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS09005;old_locus_tag=IXO1104_08950 NZ_CP047492.1 Protein Homology CDS 1969706 1970710 . + 0 ID=cds-WP_075239886.1;Parent=gene-IXO1104_RS09005;Dbxref=Genbank:WP_075239886.1;Name=WP_075239886.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303533.1;locus_tag=IXO1104_RS09005;product=beta-N-acetylhexosaminidase;protein_id=WP_075239886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1970710 1971264 . + . ID=gene-IXO1104_RS09010;Name=IXO1104_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09010;old_locus_tag=IXO1104_08955 NZ_CP047492.1 Protein Homology CDS 1970710 1971264 . + 0 ID=cds-WP_011408257.1;Parent=gene-IXO1104_RS09010;Dbxref=Genbank:WP_011408257.1;Name=WP_011408257.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449878.1;locus_tag=IXO1104_RS09010;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_011408257.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1971350 1972102 . + . ID=gene-IXO1104_RS09015;Name=IXO1104_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09015;old_locus_tag=IXO1104_08960 NZ_CP047492.1 Protein Homology CDS 1971350 1972102 . + 0 ID=cds-WP_041182080.1;Parent=gene-IXO1104_RS09015;Dbxref=Genbank:WP_041182080.1;Name=WP_041182080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408258.1;locus_tag=IXO1104_RS09015;product=S-methyl-5'-thioinosine phosphorylase;protein_id=WP_041182080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1972189 1972395 . + . ID=gene-IXO1104_RS09020;Name=IXO1104_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09020;old_locus_tag=IXO1104_08965 NZ_CP047492.1 Protein Homology CDS 1972189 1972395 . + 0 ID=cds-WP_003488188.1;Parent=gene-IXO1104_RS09020;Dbxref=Genbank:WP_003488188.1;Name=WP_003488188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488188.1;locus_tag=IXO1104_RS09020;product=cold-shock protein;protein_id=WP_003488188.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1972491 1973102 . + . ID=gene-IXO1104_RS09025;Name=IXO1104_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09025 NZ_CP047492.1 Protein Homology CDS 1972491 1973102 . + 0 ID=cds-WP_233282876.1;Parent=gene-IXO1104_RS09025;Dbxref=Genbank:WP_233282876.1;Name=WP_233282876.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: protein motif:HMM:NF013646.2;locus_tag=IXO1104_RS09025;product=FAD-dependent monooxygenase;protein_id=WP_233282876.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1973237 1973755 . + . ID=gene-IXO1104_RS09030;Name=IXO1104_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09030 NZ_CP047492.1 Protein Homology CDS 1973237 1973755 . + 0 ID=cds-WP_233282883.1;Parent=gene-IXO1104_RS09030;Dbxref=Genbank:WP_233282883.1;Name=WP_233282883.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: protein motif:HMM:NF013646.2;locus_tag=IXO1104_RS09030;product=FAD-dependent monooxygenase;protein_id=WP_233282883.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1973815 1973888 . + . ID=gene-IXO1104_RS09035;Name=IXO1104_RS09035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09035;old_locus_tag=IXO1104_08975 NZ_CP047492.1 cmsearch ncRNA 1973815 1973888 . + . ID=rna-IXO1104_RS09035;Parent=gene-IXO1104_RS09035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09035;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1973815 1973888 . + . ID=exon-IXO1104_RS09035-1;Parent=rna-IXO1104_RS09035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09035;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1973930 1974574 . - . ID=gene-IXO1104_RS09040;Name=pdeM;gbkey=Gene;gene=pdeM;gene_biotype=protein_coding;locus_tag=IXO1104_RS09040;old_locus_tag=IXO1104_08980 NZ_CP047492.1 Protein Homology CDS 1973930 1974574 . - 0 ID=cds-WP_011258616.1;Parent=gene-IXO1104_RS09040;Dbxref=Genbank:WP_011258616.1;Name=WP_011258616.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pdeM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924783.1;locus_tag=IXO1104_RS09040;product=ligase-associated DNA damage response endonuclease PdeM;protein_id=WP_011258616.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1974564 1977065 . - . ID=gene-IXO1104_RS09045;Name=IXO1104_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09045;old_locus_tag=IXO1104_08985 NZ_CP047492.1 Protein Homology CDS 1974564 1977065 . - 0 ID=cds-WP_011258617.1;Parent=gene-IXO1104_RS09045;Dbxref=Genbank:WP_011258617.1;Name=WP_011258617.1;Ontology_term=GO:0003676,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155617.1;locus_tag=IXO1104_RS09045;product=ligase-associated DNA damage response DEXH box helicase;protein_id=WP_011258617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1977062 1978666 . - . ID=gene-IXO1104_RS09050;Name=IXO1104_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09050;old_locus_tag=IXO1104_08990 NZ_CP047492.1 Protein Homology CDS 1977062 1978666 . - 0 ID=cds-WP_011258618.1;Parent=gene-IXO1104_RS09050;Dbxref=Genbank:WP_011258618.1;Name=WP_011258618.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300442.1;locus_tag=IXO1104_RS09050;product=ATP-dependent DNA ligase;protein_id=WP_011258618.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1978663 1978896 . - . ID=gene-IXO1104_RS09055;Name=IXO1104_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09055;old_locus_tag=IXO1104_08995 NZ_CP047492.1 Protein Homology CDS 1978663 1978896 . - 0 ID=cds-WP_011258619.1;Parent=gene-IXO1104_RS09055;Dbxref=Genbank:WP_011258619.1;Name=WP_011258619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366000.1;locus_tag=IXO1104_RS09055;product=hypothetical protein;protein_id=WP_011258619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1978893 1979915 . - . ID=gene-IXO1104_RS09060;Name=IXO1104_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09060;old_locus_tag=IXO1104_09000 NZ_CP047492.1 Protein Homology CDS 1978893 1979915 . - 0 ID=cds-WP_012445237.1;Parent=gene-IXO1104_RS09060;Dbxref=Genbank:WP_012445237.1;Name=WP_012445237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089699.1;locus_tag=IXO1104_RS09060;product=ligase-associated DNA damage response exonuclease;protein_id=WP_012445237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1980252 1980617 . - . ID=gene-IXO1104_RS09065;Name=IXO1104_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09065;old_locus_tag=IXO1104_09005 NZ_CP047492.1 Protein Homology CDS 1980252 1980617 . - 0 ID=cds-WP_011258621.1;Parent=gene-IXO1104_RS09065;Dbxref=Genbank:WP_011258621.1;Name=WP_011258621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302272.1;locus_tag=IXO1104_RS09065;product=hypothetical protein;protein_id=WP_011258621.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1980614 1981204 . - . ID=gene-IXO1104_RS09070;Name=IXO1104_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09070;old_locus_tag=IXO1104_09010 NZ_CP047492.1 Protein Homology CDS 1980614 1981204 . - 0 ID=cds-WP_011408267.1;Parent=gene-IXO1104_RS09070;Dbxref=Genbank:WP_011408267.1;Name=WP_011408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504002.1;locus_tag=IXO1104_RS09070;product=polymer-forming cytoskeletal protein;protein_id=WP_011408267.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1981302 1983011 . - . ID=gene-IXO1104_RS09075;Name=IXO1104_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09075;old_locus_tag=IXO1104_09015 NZ_CP047492.1 Protein Homology CDS 1981302 1983011 . - 0 ID=cds-WP_011408268.1;Parent=gene-IXO1104_RS09075;Dbxref=Genbank:WP_011408268.1;Name=WP_011408268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408268.1;locus_tag=IXO1104_RS09075;product=GGDEF domain-containing protein;protein_id=WP_011408268.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1983120 1983446 . - . ID=gene-IXO1104_RS09080;Name=IXO1104_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09080;old_locus_tag=IXO1104_09020 NZ_CP047492.1 Protein Homology CDS 1983120 1983446 . - 0 ID=cds-WP_011258624.1;Parent=gene-IXO1104_RS09080;Dbxref=Genbank:WP_011258624.1;Name=WP_011258624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921547.1;locus_tag=IXO1104_RS09080;product=hypothetical protein;protein_id=WP_011258624.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1983676 1984020 . - . ID=gene-IXO1104_RS09085;Name=IXO1104_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09085;old_locus_tag=IXO1104_09025 NZ_CP047492.1 Protein Homology CDS 1983676 1984020 . - 0 ID=cds-WP_011408269.1;Parent=gene-IXO1104_RS09085;Dbxref=Genbank:WP_011408269.1;Name=WP_011408269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269920.1;locus_tag=IXO1104_RS09085;product=hypothetical protein;protein_id=WP_011408269.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1984143 1985318 . - . ID=gene-IXO1104_RS09090;Name=IXO1104_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09090;old_locus_tag=IXO1104_09030 NZ_CP047492.1 Protein Homology CDS 1984143 1985318 . - 0 ID=cds-WP_011258625.1;Parent=gene-IXO1104_RS09090;Dbxref=Genbank:WP_011258625.1;Name=WP_011258625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911622.1;locus_tag=IXO1104_RS09090;product=thiolase family protein;protein_id=WP_011258625.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1985474 1988302 . + . ID=gene-IXO1104_RS09095;Name=IXO1104_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09095;old_locus_tag=IXO1104_09035 NZ_CP047492.1 Protein Homology CDS 1985474 1988302 . + 0 ID=cds-WP_011258626.1;Parent=gene-IXO1104_RS09095;Dbxref=Genbank:WP_011258626.1;Name=WP_011258626.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911624.1;locus_tag=IXO1104_RS09095;product=autotransporter serine protease;protein_id=WP_011258626.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1988363 1989463 . - . ID=gene-IXO1104_RS09100;Name=IXO1104_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09100;old_locus_tag=IXO1104_09040 NZ_CP047492.1 Protein Homology CDS 1988363 1989463 . - 0 ID=cds-WP_011258627.1;Parent=gene-IXO1104_RS09100;Dbxref=Genbank:WP_011258627.1;Name=WP_011258627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155625.1;locus_tag=IXO1104_RS09100;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_011258627.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1989696 1989772 . - . ID=gene-IXO1104_RS09105;Name=IXO1104_RS09105;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09105;old_locus_tag=IXO1104_09045 NZ_CP047492.1 cmsearch ncRNA 1989696 1989772 . - . ID=rna-IXO1104_RS09105;Parent=gene-IXO1104_RS09105;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09105;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1989696 1989772 . - . ID=exon-IXO1104_RS09105-1;Parent=rna-IXO1104_RS09105;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09105;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 1989931 1990539 . - . ID=gene-IXO1104_RS09110;Name=IXO1104_RS09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09110;old_locus_tag=IXO1104_09050;pseudo=true NZ_CP047492.1 Protein Homology CDS 1989931 1990539 . - 0 ID=cds-IXO1104_RS09110;Parent=gene-IXO1104_RS09110;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967352.1;locus_tag=IXO1104_RS09110;product=DUF45 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1990860 1991033 . + . ID=gene-IXO1104_RS09115;Name=IXO1104_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09115;old_locus_tag=IXO1104_09055 NZ_CP047492.1 Protein Homology CDS 1990860 1991033 . + 0 ID=cds-WP_011258629.1;Parent=gene-IXO1104_RS09115;Dbxref=Genbank:WP_011258629.1;Name=WP_011258629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258629.1;locus_tag=IXO1104_RS09115;product=DUF1328 domain-containing protein;protein_id=WP_011258629.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1991194 1991448 . - . ID=gene-IXO1104_RS09120;Name=IXO1104_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09120;old_locus_tag=IXO1104_09060 NZ_CP047492.1 Protein Homology CDS 1991194 1991448 . - 0 ID=cds-WP_011258630.1;Parent=gene-IXO1104_RS09120;Dbxref=Genbank:WP_011258630.1;Name=WP_011258630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990927.1;locus_tag=IXO1104_RS09120;product=DUF2789 domain-containing protein;protein_id=WP_011258630.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1991470 1992268 . - . ID=gene-IXO1104_RS09125;Name=IXO1104_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09125;old_locus_tag=IXO1104_09065 NZ_CP047492.1 Protein Homology CDS 1991997 1992268 . - 0 ID=cds-WP_094187763.1-2;Parent=gene-IXO1104_RS09125;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09125;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1991470 1991998 . - 1 ID=cds-WP_094187763.1-2;Parent=gene-IXO1104_RS09125;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09125;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1992508 1993476 . - . ID=gene-IXO1104_RS09130;Name=IXO1104_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09130;old_locus_tag=IXO1104_09070 NZ_CP047492.1 Protein Homology CDS 1992508 1993476 . - 0 ID=cds-WP_011258529.1;Parent=gene-IXO1104_RS09130;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS09130;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 1993635 1993901 . + . ID=gene-IXO1104_RS09135;Name=IXO1104_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09135;old_locus_tag=IXO1104_09075 NZ_CP047492.1 Protein Homology CDS 1993635 1993901 . + 0 ID=cds-WP_011258631.1;Parent=gene-IXO1104_RS09135;Dbxref=Genbank:WP_011258631.1;Name=WP_011258631.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452846.1;locus_tag=IXO1104_RS09135;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_011258631.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1994158 1994682 . + . ID=gene-IXO1104_RS09140;Name=IXO1104_RS09140;end_range=1994682,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09140;old_locus_tag=IXO1104_09080;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1994158 1994682 . + 0 ID=cds-IXO1104_RS09140;Parent=gene-IXO1104_RS09140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1994682,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS09140;partial=true;product=IS5-like element ISXo1 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1994775 1995731 . + . ID=gene-IXO1104_RS09145;Name=IXO1104_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09145;old_locus_tag=IXO1104_09085 NZ_CP047492.1 Protein Homology CDS 1994775 1995731 . + 0 ID=cds-WP_011407237.1-5;Parent=gene-IXO1104_RS09145;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS09145;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1995885 1996460 . - . ID=gene-IXO1104_RS09150;Name=IXO1104_RS09150;end_range=1996460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09150;old_locus_tag=IXO1104_09090;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 1995885 1996460 . - 0 ID=cds-IXO1104_RS09150;Parent=gene-IXO1104_RS09150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1996460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS09150;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 1996504 1997302 . + . ID=gene-IXO1104_RS09155;Name=IXO1104_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09155;old_locus_tag=IXO1104_09095 NZ_CP047492.1 Protein Homology CDS 1996504 1996775 . + 0 ID=cds-WP_094187763.1-3;Parent=gene-IXO1104_RS09155;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09155;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1996774 1997302 . + 1 ID=cds-WP_094187763.1-3;Parent=gene-IXO1104_RS09155;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09155;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1997310 1997960 . - . ID=gene-IXO1104_RS09160;Name=IXO1104_RS09160;end_range=1997960,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09160;old_locus_tag=IXO1104_09100;partial=true;pseudo=true;start_range=.,1997310 NZ_CP047492.1 Protein Homology CDS 1997310 1997960 . - 0 ID=cds-IXO1104_RS09160;Parent=gene-IXO1104_RS09160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1997960,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS09160;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,1997310;transl_table=11 NZ_CP047492.1 RefSeq gene 1998007 1998805 . + . ID=gene-IXO1104_RS09165;Name=IXO1104_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09165;old_locus_tag=IXO1104_09105 NZ_CP047492.1 Protein Homology CDS 1998007 1998278 . + 0 ID=cds-WP_099051302.1-2;Parent=gene-IXO1104_RS09165;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09165;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 1998277 1998805 . + 1 ID=cds-WP_099051302.1-2;Parent=gene-IXO1104_RS09165;Dbxref=Genbank:WP_099051302.1;Name=WP_099051302.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09165;product=IS5 family transposase;protein_id=WP_099051302.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 1998815 1999390 . + . ID=gene-IXO1104_RS09170;Name=IXO1104_RS09170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09170;old_locus_tag=IXO1104_09110;partial=true;pseudo=true;start_range=.,1998815 NZ_CP047492.1 Protein Homology CDS 1998815 1999390 . + 0 ID=cds-IXO1104_RS09170;Parent=gene-IXO1104_RS09170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS09170;partial=true;product=transposase;pseudo=true;start_range=.,1998815;transl_table=11 NZ_CP047492.1 RefSeq gene 1999530 1999606 . + . ID=gene-IXO1104_RS09175;Name=IXO1104_RS09175;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09175;old_locus_tag=IXO1104_09115 NZ_CP047492.1 cmsearch ncRNA 1999530 1999606 . + . ID=rna-IXO1104_RS09175;Parent=gene-IXO1104_RS09175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09175;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 1999530 1999606 . + . ID=exon-IXO1104_RS09175-1;Parent=rna-IXO1104_RS09175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09175;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 1999783 1999968 . - . ID=gene-IXO1104_RS09180;Name=IXO1104_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09180;old_locus_tag=IXO1104_09120 NZ_CP047492.1 Protein Homology CDS 1999783 1999968 . - 0 ID=cds-WP_011258635.1;Parent=gene-IXO1104_RS09180;Dbxref=Genbank:WP_011258635.1;Name=WP_011258635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155632.1;locus_tag=IXO1104_RS09180;product=hypothetical protein;protein_id=WP_011258635.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2000158 2001534 . - . ID=gene-IXO1104_RS09185;Name=IXO1104_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09185;old_locus_tag=IXO1104_09125 NZ_CP047492.1 Protein Homology CDS 2000158 2001534 . - 0 ID=cds-WP_012445232.1;Parent=gene-IXO1104_RS09185;Dbxref=Genbank:WP_012445232.1;Name=WP_012445232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503984.1;locus_tag=IXO1104_RS09185;product=Hsp70 family protein;protein_id=WP_012445232.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2001674 2002147 . - . ID=gene-IXO1104_RS09190;Name=IXO1104_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09190;old_locus_tag=IXO1104_09130 NZ_CP047492.1 Protein Homology CDS 2001674 2002147 . - 0 ID=cds-WP_069964916.1;Parent=gene-IXO1104_RS09190;Dbxref=Genbank:WP_069964916.1;Name=WP_069964916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578221.1;locus_tag=IXO1104_RS09190;product=peptidylprolyl isomerase;protein_id=WP_069964916.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2002323 2003558 . - . ID=gene-IXO1104_RS09195;Name=IXO1104_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09195;old_locus_tag=IXO1104_09135 NZ_CP047492.1 Protein Homology CDS 2002323 2003558 . - 0 ID=cds-WP_012443979.1;Parent=gene-IXO1104_RS09195;Dbxref=Genbank:WP_012443979.1;Name=WP_012443979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS09195;product=ISL3 family transposase;protein_id=WP_012443979.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2003806 2004855 . - . ID=gene-IXO1104_RS09200;Name=IXO1104_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09200;old_locus_tag=IXO1104_09140 NZ_CP047492.1 Protein Homology CDS 2003806 2004855 . - 0 ID=cds-WP_011408279.1;Parent=gene-IXO1104_RS09200;Dbxref=Genbank:WP_011408279.1;Name=WP_011408279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113013.1;locus_tag=IXO1104_RS09200;product=cation diffusion facilitator family transporter;protein_id=WP_011408279.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2004970 2005305 . + . ID=gene-IXO1104_RS09205;Name=IXO1104_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09205;old_locus_tag=IXO1104_09145 NZ_CP047492.1 Protein Homology CDS 2004970 2005305 . + 0 ID=cds-WP_011408280.1;Parent=gene-IXO1104_RS09205;Dbxref=Genbank:WP_011408280.1;Name=WP_011408280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489493.1;locus_tag=IXO1104_RS09205;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_011408280.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2005594 2006367 . - . ID=gene-IXO1104_RS09210;Name=IXO1104_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09210 NZ_CP047492.1 Protein Homology CDS 2005594 2006367 . - 0 ID=cds-WP_228329745.1;Parent=gene-IXO1104_RS09210;Dbxref=Genbank:WP_228329745.1;Name=WP_228329745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997089.1;locus_tag=IXO1104_RS09210;product=hypothetical protein;protein_id=WP_228329745.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2006775 2007893 . - . ID=gene-IXO1104_RS09215;Name=IXO1104_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09215;old_locus_tag=IXO1104_09155 NZ_CP047492.1 Protein Homology CDS 2006775 2007893 . - 0 ID=cds-WP_075239735.1;Parent=gene-IXO1104_RS09215;Dbxref=Genbank:WP_075239735.1;Name=WP_075239735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155638.1;locus_tag=IXO1104_RS09215;product=alkene reductase;protein_id=WP_075239735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2008114 2009325 . + . ID=gene-IXO1104_RS09220;Name=IXO1104_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09220;old_locus_tag=IXO1104_09160 NZ_CP047492.1 Protein Homology CDS 2008114 2009325 . + 0 ID=cds-WP_011258642.1;Parent=gene-IXO1104_RS09220;Dbxref=Genbank:WP_011258642.1;Name=WP_011258642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159530.1;locus_tag=IXO1104_RS09220;product=MFS transporter;protein_id=WP_011258642.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2009888 2010343 . + . ID=gene-IXO1104_RS09225;Name=IXO1104_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09225;old_locus_tag=IXO1104_09170 NZ_CP047492.1 Protein Homology CDS 2009888 2010343 . + 0 ID=cds-WP_011258643.1;Parent=gene-IXO1104_RS09225;Dbxref=Genbank:WP_011258643.1;Name=WP_011258643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303138.1;locus_tag=IXO1104_RS09225;product=PA2169 family four-helix-bundle protein;protein_id=WP_011258643.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2010617 2011219 . + . ID=gene-IXO1104_RS09230;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=IXO1104_RS09230;old_locus_tag=IXO1104_09175 NZ_CP047492.1 Protein Homology CDS 2010617 2011219 . + 0 ID=cds-WP_011408284.1;Parent=gene-IXO1104_RS09230;Dbxref=Genbank:WP_011408284.1;Name=WP_011408284.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408284.1;locus_tag=IXO1104_RS09230;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_011408284.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2011255 2011863 . + . ID=gene-IXO1104_RS09235;Name=IXO1104_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09235;old_locus_tag=IXO1104_09180 NZ_CP047492.1 Protein Homology CDS 2011255 2011863 . + 0 ID=cds-WP_011258645.1;Parent=gene-IXO1104_RS09235;Dbxref=Genbank:WP_011258645.1;Name=WP_011258645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503972.1;locus_tag=IXO1104_RS09235;product=hypothetical protein;protein_id=WP_011258645.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2011923 2012117 . + . ID=gene-IXO1104_RS09240;Name=IXO1104_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09240;old_locus_tag=IXO1104_09185 NZ_CP047492.1 Protein Homology CDS 2011923 2012117 . + 0 ID=cds-WP_011258646.1;Parent=gene-IXO1104_RS09240;Dbxref=Genbank:WP_011258646.1;Name=WP_011258646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155644.1;locus_tag=IXO1104_RS09240;product=hypothetical protein;protein_id=WP_011258646.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2012187 2013557 . + . ID=gene-IXO1104_RS09245;Name=IXO1104_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09245;old_locus_tag=IXO1104_09190 NZ_CP047492.1 Protein Homology CDS 2012187 2013557 . + 0 ID=cds-WP_011258647.1;Parent=gene-IXO1104_RS09245;Dbxref=Genbank:WP_011258647.1;Name=WP_011258647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258647.1;locus_tag=IXO1104_RS09245;product=virulence factor family protein;protein_id=WP_011258647.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2013751 2013827 . + . ID=gene-IXO1104_RS09250;Name=IXO1104_RS09250;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09250;old_locus_tag=IXO1104_09195 NZ_CP047492.1 cmsearch ncRNA 2013751 2013827 . + . ID=rna-IXO1104_RS09250;Parent=gene-IXO1104_RS09250;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09250;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2013751 2013827 . + . ID=exon-IXO1104_RS09250-1;Parent=rna-IXO1104_RS09250;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09250;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2014181 2016745 . - . ID=gene-IXO1104_RS09255;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=IXO1104_RS09255;old_locus_tag=IXO1104_09200 NZ_CP047492.1 Protein Homology CDS 2014181 2016745 . - 0 ID=cds-WP_012445224.1;Parent=gene-IXO1104_RS09255;Dbxref=Genbank:WP_012445224.1;Name=WP_012445224.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485461.1;locus_tag=IXO1104_RS09255;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_012445224.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2016814 2017715 . + . ID=gene-IXO1104_RS09260;Name=IXO1104_RS09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09260;old_locus_tag=IXO1104_09205;pseudo=true NZ_CP047492.1 Protein Homology CDS 2016814 2017715 . + 0 ID=cds-IXO1104_RS09260;Parent=gene-IXO1104_RS09260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850265.1;locus_tag=IXO1104_RS09260;product=DUF998 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2017726 2018073 . + . ID=gene-IXO1104_RS09265;Name=IXO1104_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09265;old_locus_tag=IXO1104_09210 NZ_CP047492.1 Protein Homology CDS 2017726 2018073 . + 0 ID=cds-WP_011408290.1;Parent=gene-IXO1104_RS09265;Dbxref=Genbank:WP_011408290.1;Name=WP_011408290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578235.1;locus_tag=IXO1104_RS09265;product=RidA family protein;protein_id=WP_011408290.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2018236 2019306 . - . ID=gene-IXO1104_RS09270;Name=IXO1104_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09270;old_locus_tag=IXO1104_09215 NZ_CP047492.1 Protein Homology CDS 2018236 2019306 . - 0 ID=cds-WP_012445221.1;Parent=gene-IXO1104_RS09270;Dbxref=Genbank:WP_012445221.1;Name=WP_012445221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924864.1;locus_tag=IXO1104_RS09270;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_012445221.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2019324 2020106 . - . ID=gene-IXO1104_RS09275;Name=IXO1104_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09275;old_locus_tag=IXO1104_09220 NZ_CP047492.1 Protein Homology CDS 2019324 2020106 . - 0 ID=cds-WP_011258653.1;Parent=gene-IXO1104_RS09275;Dbxref=Genbank:WP_011258653.1;Name=WP_011258653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967316.1;locus_tag=IXO1104_RS09275;product=DUF1295 domain-containing protein;protein_id=WP_011258653.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2020103 2020648 . - . ID=gene-IXO1104_RS09280;Name=IXO1104_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09280;old_locus_tag=IXO1104_09225 NZ_CP047492.1 Protein Homology CDS 2020103 2020648 . - 0 ID=cds-WP_011258654.1;Parent=gene-IXO1104_RS09280;Dbxref=Genbank:WP_011258654.1;Name=WP_011258654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451779.1;locus_tag=IXO1104_RS09280;product=DUF2878 domain-containing protein;protein_id=WP_011258654.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2020645 2021940 . - . ID=gene-IXO1104_RS09285;Name=IXO1104_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09285;old_locus_tag=IXO1104_09230 NZ_CP047492.1 Protein Homology CDS 2020645 2021940 . - 0 ID=cds-WP_011258655.1;Parent=gene-IXO1104_RS09285;Dbxref=Genbank:WP_011258655.1;Name=WP_011258655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380444.1;locus_tag=IXO1104_RS09285;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_011258655.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2021937 2022821 . - . ID=gene-IXO1104_RS09290;Name=IXO1104_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09290;old_locus_tag=IXO1104_09235 NZ_CP047492.1 Protein Homology CDS 2021937 2022821 . - 0 ID=cds-WP_011408295.1;Parent=gene-IXO1104_RS09290;Dbxref=Genbank:WP_011408295.1;Name=WP_011408295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485446.1;locus_tag=IXO1104_RS09290;product=DUF1365 domain-containing protein;protein_id=WP_011408295.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2022821 2024071 . - . ID=gene-IXO1104_RS09295;Name=IXO1104_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09295;old_locus_tag=IXO1104_09240 NZ_CP047492.1 Protein Homology CDS 2022821 2024071 . - 0 ID=cds-WP_027704227.1;Parent=gene-IXO1104_RS09295;Dbxref=Genbank:WP_027704227.1;Name=WP_027704227.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155653.1;locus_tag=IXO1104_RS09295;product=FAD-dependent oxidoreductase;protein_id=WP_027704227.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2024068 2025066 . - . ID=gene-IXO1104_RS09300;Name=IXO1104_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09300;old_locus_tag=IXO1104_09245 NZ_CP047492.1 Protein Homology CDS 2024068 2025066 . - 0 ID=cds-WP_011408297.1;Parent=gene-IXO1104_RS09300;Dbxref=Genbank:WP_011408297.1;Name=WP_011408297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166055.1;locus_tag=IXO1104_RS09300;product=acyl-CoA desaturase;protein_id=WP_011408297.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2025292 2026125 . - . ID=gene-IXO1104_RS09305;Name=IXO1104_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09305;old_locus_tag=IXO1104_09250 NZ_CP047492.1 Protein Homology CDS 2025292 2026125 . - 0 ID=cds-WP_012445217.1;Parent=gene-IXO1104_RS09305;Dbxref=Genbank:WP_012445217.1;Name=WP_012445217.1;Ontology_term=GO:0005886,GO:0016021;gbkey=CDS;go_component=plasma membrane|0005886||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485441.1;locus_tag=IXO1104_RS09305;product=anti-sigma factor;protein_id=WP_012445217.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2026122 2026685 . - . ID=gene-IXO1104_RS09310;Name=IXO1104_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09310;old_locus_tag=IXO1104_09255 NZ_CP047492.1 Protein Homology CDS 2026122 2026685 . - 0 ID=cds-WP_011258659.1;Parent=gene-IXO1104_RS09310;Dbxref=Genbank:WP_011258659.1;Name=WP_011258659.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993590.1;locus_tag=IXO1104_RS09310;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011258659.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2026744 2027112 . - . ID=gene-IXO1104_RS09315;Name=IXO1104_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09315;old_locus_tag=IXO1104_09260 NZ_CP047492.1 Protein Homology CDS 2026744 2027112 . - 0 ID=cds-WP_012445216.1;Parent=gene-IXO1104_RS09315;Dbxref=Genbank:WP_012445216.1;Name=WP_012445216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366091.1;locus_tag=IXO1104_RS09315;product=hypothetical protein;protein_id=WP_012445216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2027198 2027980 . - . ID=gene-IXO1104_RS09320;Name=IXO1104_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09320;old_locus_tag=IXO1104_09265 NZ_CP047492.1 Protein Homology CDS 2027198 2027980 . - 0 ID=cds-WP_011258660.1;Parent=gene-IXO1104_RS09320;Dbxref=Genbank:WP_011258660.1;Name=WP_011258660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167495.1;locus_tag=IXO1104_RS09320;product=hypothetical protein;protein_id=WP_011258660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2028599 2029027 . - . ID=gene-IXO1104_RS09325;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09325;old_locus_tag=IXO1104_09270 NZ_CP047492.1 Protein Homology CDS 2028599 2029027 . - 0 ID=cds-WP_012445213.1;Parent=gene-IXO1104_RS09325;Dbxref=Genbank:WP_012445213.1;Name=WP_012445213.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113004.1;locus_tag=IXO1104_RS09325;product=Rnf electron transport complex subunit RnfB;protein_id=WP_012445213.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2029029 2029625 . - . ID=gene-IXO1104_RS09330;Name=IXO1104_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09330;old_locus_tag=IXO1104_09275 NZ_CP047492.1 Protein Homology CDS 2029029 2029625 . - 0 ID=cds-WP_012445212.1;Parent=gene-IXO1104_RS09330;Dbxref=Genbank:WP_012445212.1;Name=WP_012445212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462990.1;locus_tag=IXO1104_RS09330;product=HAD-IB family hydrolase;protein_id=WP_012445212.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2029829 2031913 . - . ID=gene-IXO1104_RS09335;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=IXO1104_RS09335;old_locus_tag=IXO1104_09280 NZ_CP047492.1 Protein Homology CDS 2029829 2031913 . - 0 ID=cds-WP_011258663.1;Parent=gene-IXO1104_RS09335;Dbxref=Genbank:WP_011258663.1;Name=WP_011258663.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304414.1;locus_tag=IXO1104_RS09335;product=methionine--tRNA ligase;protein_id=WP_011258663.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2032138 2032587 . - . ID=gene-IXO1104_RS09340;Name=IXO1104_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09340;old_locus_tag=IXO1104_09285 NZ_CP047492.1 Protein Homology CDS 2032138 2032587 . - 0 ID=cds-WP_012445211.1;Parent=gene-IXO1104_RS09340;Dbxref=Genbank:WP_012445211.1;Name=WP_012445211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237831.1;locus_tag=IXO1104_RS09340;product=DUF2147 domain-containing protein;protein_id=WP_012445211.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2032841 2033229 . - . ID=gene-IXO1104_RS09345;Name=IXO1104_RS09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09345;old_locus_tag=IXO1104_09290;pseudo=true NZ_CP047492.1 Protein Homology CDS 2032841 2033229 . - 0 ID=cds-IXO1104_RS09345;Parent=gene-IXO1104_RS09345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159538.1;locus_tag=IXO1104_RS09345;product=VOC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2033351 2034411 . + . ID=gene-IXO1104_RS09350;Name=IXO1104_RS09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09350;old_locus_tag=IXO1104_09295;pseudo=true NZ_CP047492.1 Protein Homology CDS 2033351 2034411 . + 0 ID=cds-IXO1104_RS09350;Parent=gene-IXO1104_RS09350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=IXO1104_RS09350;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2034682 2036079 . + . ID=gene-IXO1104_RS09355;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=IXO1104_RS09355;old_locus_tag=IXO1104_09300 NZ_CP047492.1 Protein Homology CDS 2034682 2036079 . + 0 ID=cds-WP_012445208.1;Parent=gene-IXO1104_RS09355;Dbxref=Genbank:WP_012445208.1;Name=WP_012445208.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965585.1;locus_tag=IXO1104_RS09355;product=S-methylmethionine permease;protein_id=WP_012445208.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2036076 2037053 . + . ID=gene-IXO1104_RS09360;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=IXO1104_RS09360;old_locus_tag=IXO1104_09305 NZ_CP047492.1 Protein Homology CDS 2036076 2037053 . + 0 ID=cds-WP_011258667.1;Parent=gene-IXO1104_RS09360;Dbxref=Genbank:WP_011258667.1;Name=WP_011258667.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258667.1;locus_tag=IXO1104_RS09360;product=homocysteine S-methyltransferase;protein_id=WP_011258667.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2037235 2039172 . - . ID=gene-IXO1104_RS09365;Name=IXO1104_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09365;old_locus_tag=IXO1104_09310 NZ_CP047492.1 Protein Homology CDS 2037235 2039172 . - 0 ID=cds-WP_011258668.1;Parent=gene-IXO1104_RS09365;Dbxref=Genbank:WP_011258668.1;Name=WP_011258668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346878.1;locus_tag=IXO1104_RS09365;product=DUF885 family protein;protein_id=WP_011258668.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2039454 2039530 . - . ID=gene-IXO1104_RS09370;Name=IXO1104_RS09370;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09370;old_locus_tag=IXO1104_09315 NZ_CP047492.1 cmsearch ncRNA 2039454 2039530 . - . ID=rna-IXO1104_RS09370;Parent=gene-IXO1104_RS09370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09370;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2039454 2039530 . - . ID=exon-IXO1104_RS09370-1;Parent=rna-IXO1104_RS09370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09370;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2039593 2040369 . - . ID=gene-IXO1104_RS09375;Name=IXO1104_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09375;old_locus_tag=IXO1104_09320 NZ_CP047492.1 Protein Homology CDS 2039593 2040369 . - 0 ID=cds-WP_011258669.1;Parent=gene-IXO1104_RS09375;Dbxref=Genbank:WP_011258669.1;Name=WP_011258669.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155671.1;locus_tag=IXO1104_RS09375;product=queuosine precursor transporter;protein_id=WP_011258669.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2040374 2041048 . - . ID=gene-IXO1104_RS09380;Name=IXO1104_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09380;old_locus_tag=IXO1104_09325 NZ_CP047492.1 Protein Homology CDS 2040374 2041048 . - 0 ID=cds-WP_011258670.1;Parent=gene-IXO1104_RS09380;Dbxref=Genbank:WP_011258670.1;Name=WP_011258670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380413.1;locus_tag=IXO1104_RS09380;product=DUF502 domain-containing protein;protein_id=WP_011258670.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2041282 2042514 . + . ID=gene-IXO1104_RS09385;Name=IXO1104_RS09385;end_range=2042514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09385;old_locus_tag=IXO1104_09330;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2041282 2042514 . + 0 ID=cds-IXO1104_RS09385;Parent=gene-IXO1104_RS09385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2042514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911690.1;locus_tag=IXO1104_RS09385;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2042672 2044048 . + . ID=gene-IXO1104_RS09390;Name=IXO1104_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09390;old_locus_tag=IXO1104_09335 NZ_CP047492.1 Protein Homology CDS 2042672 2044048 . + 0 ID=cds-WP_117231565.1;Parent=gene-IXO1104_RS09390;Dbxref=Genbank:WP_117231565.1;Name=WP_117231565.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS09390;product=IS5 family transposase;protein_id=WP_117231565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2044088 2044483 . - . ID=gene-IXO1104_RS09395;Name=IXO1104_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09395;old_locus_tag=IXO1104_09340 NZ_CP047492.1 Protein Homology CDS 2044088 2044483 . - 0 ID=cds-WP_011408311.1;Parent=gene-IXO1104_RS09395;Dbxref=Genbank:WP_011408311.1;Name=WP_011408311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408311.1;locus_tag=IXO1104_RS09395;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_011408311.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2044526 2046001 . - . ID=gene-IXO1104_RS09400;Name=IXO1104_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09400;old_locus_tag=IXO1104_09345 NZ_CP047492.1 Protein Homology CDS 2044526 2046001 . - 0 ID=cds-WP_164993844.1;Parent=gene-IXO1104_RS09400;Dbxref=Genbank:WP_164993844.1;Name=WP_164993844.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS09400;product=IS5 family transposase;protein_id=WP_164993844.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2046799 2047215 . + . ID=gene-IXO1104_RS09405;Name=IXO1104_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09405;old_locus_tag=IXO1104_09350 NZ_CP047492.1 GeneMarkS-2+ CDS 2046799 2047215 . + 0 ID=cds-WP_011408313.1;Parent=gene-IXO1104_RS09405;Dbxref=Genbank:WP_011408313.1;Name=WP_011408313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS09405;product=hypothetical protein;protein_id=WP_011408313.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2047229 2047342 . - . ID=gene-IXO1104_RS09410;Name=IXO1104_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09410;old_locus_tag=IXO1104_09355 NZ_CP047492.1 Protein Homology CDS 2047229 2047342 . - 0 ID=cds-WP_229001950.1;Parent=gene-IXO1104_RS09410;Dbxref=Genbank:WP_229001950.1;Name=WP_229001950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013730.2;locus_tag=IXO1104_RS09410;product=hypothetical protein;protein_id=WP_229001950.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2047534 2048514 . - . ID=gene-IXO1104_RS09415;Name=cysC;end_range=2048514,.;gbkey=Gene;gene=cysC;gene_biotype=pseudogene;locus_tag=IXO1104_RS09415;old_locus_tag=IXO1104_09360;partial=true;pseudo=true;start_range=.,2047534 NZ_CP047492.1 Protein Homology CDS 2047534 2048514 . - 0 ID=cds-IXO1104_RS09415;Parent=gene-IXO1104_RS09415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006790,GO:0004020;end_range=2048514,.;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167870.1;locus_tag=IXO1104_RS09415;partial=true;product=adenylyl-sulfate kinase;pseudo=true;start_range=.,2047534;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2048527 2049568 . - . ID=gene-IXO1104_RS09420;Name=IXO1104_RS09420;end_range=2049568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09420;old_locus_tag=IXO1104_09365;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2048527 2049568 . - 0 ID=cds-IXO1104_RS09420;Parent=gene-IXO1104_RS09420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2049568,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS09420;partial=true;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2049657 2050622 . + . ID=gene-IXO1104_RS09425;Name=IXO1104_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09425;old_locus_tag=IXO1104_09370 NZ_CP047492.1 Protein Homology CDS 2049657 2050622 . + 0 ID=cds-WP_109181970.1;Parent=gene-IXO1104_RS09425;Dbxref=Genbank:WP_109181970.1;Name=WP_109181970.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS09425;product=IS1595 family transposase;protein_id=WP_109181970.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2050629 2051077 . - . ID=gene-IXO1104_RS09430;Name=IXO1104_RS09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09430;old_locus_tag=IXO1104_09375;partial=true;pseudo=true;start_range=.,2050629 NZ_CP047492.1 Protein Homology CDS 2050629 2051077 . - 0 ID=cds-IXO1104_RS09430;Parent=gene-IXO1104_RS09430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS09430;partial=true;product=transposase;pseudo=true;start_range=.,2050629;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2051189 2051665 . - . ID=gene-IXO1104_RS09435;Name=IXO1104_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09435;old_locus_tag=IXO1104_09380;partial=true;pseudo=true;start_range=.,2051189 NZ_CP047492.1 Protein Homology CDS 2051189 2051665 . - 0 ID=cds-IXO1104_RS09435;Parent=gene-IXO1104_RS09435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904273.1;locus_tag=IXO1104_RS09435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2051189;transl_table=11 NZ_CP047492.1 RefSeq gene 2051988 2052064 . - . ID=gene-IXO1104_RS09440;Name=IXO1104_RS09440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09440;old_locus_tag=IXO1104_09385 NZ_CP047492.1 cmsearch ncRNA 2051988 2052064 . - . ID=rna-IXO1104_RS09440;Parent=gene-IXO1104_RS09440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09440;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2051988 2052064 . - . ID=exon-IXO1104_RS09440-1;Parent=rna-IXO1104_RS09440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09440;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2052132 2053475 . - . ID=gene-IXO1104_RS09445;Name=IXO1104_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09445;old_locus_tag=IXO1104_09390 NZ_CP047492.1 Protein Homology CDS 2052132 2053475 . - 0 ID=cds-WP_012445197.1;Parent=gene-IXO1104_RS09445;Dbxref=Genbank:WP_012445197.1;Name=WP_012445197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472356.1;locus_tag=IXO1104_RS09445;product=polyhydroxyalkanoate depolymerase;protein_id=WP_012445197.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2053616 2054218 . - . ID=gene-IXO1104_RS09450;Name=IXO1104_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09450;old_locus_tag=IXO1104_09395 NZ_CP047492.1 Protein Homology CDS 2053616 2054218 . - 0 ID=cds-WP_011408316.1;Parent=gene-IXO1104_RS09450;Dbxref=Genbank:WP_011408316.1;Name=WP_011408316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258678.1;locus_tag=IXO1104_RS09450;product=class I SAM-dependent methyltransferase;protein_id=WP_011408316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2054292 2054738 . + . ID=gene-IXO1104_RS09455;Name=IXO1104_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09455;old_locus_tag=IXO1104_09400 NZ_CP047492.1 Protein Homology CDS 2054292 2054738 . + 0 ID=cds-WP_011408317.1;Parent=gene-IXO1104_RS09455;Dbxref=Genbank:WP_011408317.1;Name=WP_011408317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902407.1;locus_tag=IXO1104_RS09455;product=CopD family protein;protein_id=WP_011408317.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2054816 2055082 . - . ID=gene-IXO1104_RS09460;Name=IXO1104_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09460;old_locus_tag=IXO1104_09405 NZ_CP047492.1 GeneMarkS-2+ CDS 2054816 2055082 . - 0 ID=cds-WP_012445196.1;Parent=gene-IXO1104_RS09460;Dbxref=Genbank:WP_012445196.1;Name=WP_012445196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS09460;product=hypothetical protein;protein_id=WP_012445196.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2055418 2055915 . - . ID=gene-IXO1104_RS09465;Name=IXO1104_RS09465;end_range=2055915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09465;old_locus_tag=IXO1104_09410;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2055418 2055915 . - 0 ID=cds-IXO1104_RS09465;Parent=gene-IXO1104_RS09465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2055915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558342.1;locus_tag=IXO1104_RS09465;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2055976 2057121 . - . ID=gene-IXO1104_RS09470;Name=IXO1104_RS09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09470;old_locus_tag=IXO1104_09415;partial=true;pseudo=true;start_range=.,2055976 NZ_CP047492.1 Protein Homology CDS 2055976 2057121 . - 0 ID=cds-IXO1104_RS09470;Parent=gene-IXO1104_RS09470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024091.2;locus_tag=IXO1104_RS09470;partial=true;product=DUF3526 domain-containing protein;pseudo=true;start_range=.,2055976;transl_table=11 NZ_CP047492.1 RefSeq gene 2057184 2058596 . - . ID=gene-IXO1104_RS09475;Name=IXO1104_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09475;old_locus_tag=IXO1104_09420 NZ_CP047492.1 Protein Homology CDS 2057184 2058596 . - 0 ID=cds-WP_075240396.1;Parent=gene-IXO1104_RS09475;Dbxref=Genbank:WP_075240396.1;Name=WP_075240396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258681.1;locus_tag=IXO1104_RS09475;product=DUF3526 domain-containing protein;protein_id=WP_075240396.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2058593 2059330 . - . ID=gene-IXO1104_RS09480;Name=IXO1104_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09480;old_locus_tag=IXO1104_09425 NZ_CP047492.1 Protein Homology CDS 2058593 2059330 . - 0 ID=cds-WP_075240395.1;Parent=gene-IXO1104_RS09480;Dbxref=Genbank:WP_075240395.1;Name=WP_075240395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258682.1;locus_tag=IXO1104_RS09480;product=ABC transporter ATP-binding protein;protein_id=WP_075240395.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2059330 2061480 . - . ID=gene-IXO1104_RS09485;Name=IXO1104_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09485;old_locus_tag=IXO1104_09430 NZ_CP047492.1 Protein Homology CDS 2059330 2061480 . - 0 ID=cds-WP_012445192.1;Parent=gene-IXO1104_RS09485;Dbxref=Genbank:WP_012445192.1;Name=WP_012445192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258683.1;locus_tag=IXO1104_RS09485;product=TonB-dependent receptor;protein_id=WP_012445192.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2061789 2062239 . + . ID=gene-IXO1104_RS09490;Name=IXO1104_RS09490;end_range=2062239,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09490;old_locus_tag=IXO1104_09435;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2061789 2062239 . + 0 ID=cds-IXO1104_RS09490;Parent=gene-IXO1104_RS09490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2062239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS09490;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2062350 2063309 . - . ID=gene-IXO1104_RS09495;Name=IXO1104_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09495;old_locus_tag=IXO1104_09440 NZ_CP047492.1 Protein Homology CDS 2062350 2063309 . - 0 ID=cds-WP_011258685.1;Parent=gene-IXO1104_RS09495;Dbxref=Genbank:WP_011258685.1;Name=WP_011258685.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258685.1;locus_tag=IXO1104_RS09495;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_011258685.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2063485 2067075 . - . ID=gene-IXO1104_RS09500;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=IXO1104_RS09500;old_locus_tag=IXO1104_09445 NZ_CP047492.1 Protein Homology CDS 2063485 2067075 . - 0 ID=cds-WP_011258686.1;Parent=gene-IXO1104_RS09500;Dbxref=Genbank:WP_011258686.1;Name=WP_011258686.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902404.1;locus_tag=IXO1104_RS09500;product=DNA polymerase III subunit alpha;protein_id=WP_011258686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2067533 2068273 . - . ID=gene-IXO1104_RS09505;Name=IXO1104_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09505;old_locus_tag=IXO1104_09450 NZ_CP047492.1 Protein Homology CDS 2067533 2068273 . - 0 ID=cds-WP_041182085.1;Parent=gene-IXO1104_RS09505;Dbxref=Genbank:WP_041182085.1;Name=WP_041182085.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408322.1;locus_tag=IXO1104_RS09505;product=ribonuclease HII;protein_id=WP_041182085.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2068270 2069568 . - . ID=gene-IXO1104_RS09510;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09510;old_locus_tag=IXO1104_09455 NZ_CP047492.1 Protein Homology CDS 2068270 2069568 . - 0 ID=cds-WP_011258688.1;Parent=gene-IXO1104_RS09510;Dbxref=Genbank:WP_011258688.1;Name=WP_011258688.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258688.1;locus_tag=IXO1104_RS09510;product=lipid-A-disaccharide synthase;protein_id=WP_011258688.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2069565 2070356 . - . ID=gene-IXO1104_RS09515;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=IXO1104_RS09515;old_locus_tag=IXO1104_09460 NZ_CP047492.1 Protein Homology CDS 2069565 2070356 . - 0 ID=cds-WP_011258689.1;Parent=gene-IXO1104_RS09515;Dbxref=Genbank:WP_011258689.1;Name=WP_011258689.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507232.1;locus_tag=IXO1104_RS09515;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_011258689.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2070380 2070841 . - . ID=gene-IXO1104_RS09520;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS09520;old_locus_tag=IXO1104_09465 NZ_CP047492.1 Protein Homology CDS 2070380 2070841 . - 0 ID=cds-WP_011258690.1;Parent=gene-IXO1104_RS09520;Dbxref=Genbank:WP_011258690.1;Name=WP_011258690.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036554.1;locus_tag=IXO1104_RS09520;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_011258690.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2070838 2071851 . - . ID=gene-IXO1104_RS09525;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=IXO1104_RS09525;old_locus_tag=IXO1104_09470 NZ_CP047492.1 Protein Homology CDS 2070838 2071851 . - 0 ID=cds-WP_011258691.1;Parent=gene-IXO1104_RS09525;Dbxref=Genbank:WP_011258691.1;Name=WP_011258691.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965614.1;locus_tag=IXO1104_RS09525;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_011258691.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2071979 2072173 . + . ID=gene-IXO1104_RS09530;Name=IXO1104_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09530;old_locus_tag=IXO1104_09475;pseudo=true NZ_CP047492.1 Protein Homology CDS 2071979 2072173 . + 0 ID=cds-IXO1104_RS09530;Parent=gene-IXO1104_RS09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159402.1;locus_tag=IXO1104_RS09530;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2072182 2072980 . - . ID=gene-IXO1104_RS09535;Name=IXO1104_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09535;old_locus_tag=IXO1104_09480 NZ_CP047492.1 Protein Homology CDS 2072709 2072980 . - 0 ID=cds-WP_094187763.1-4;Parent=gene-IXO1104_RS09535;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09535;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2072182 2072710 . - 1 ID=cds-WP_094187763.1-4;Parent=gene-IXO1104_RS09535;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS09535;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2073103 2075469 . - . ID=gene-IXO1104_RS09540;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=IXO1104_RS09540;old_locus_tag=IXO1104_09485 NZ_CP047492.1 Protein Homology CDS 2073103 2075469 . - 0 ID=cds-WP_012445188.1;Parent=gene-IXO1104_RS09540;Dbxref=Genbank:WP_012445188.1;Name=WP_012445188.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117511.1;locus_tag=IXO1104_RS09540;product=outer membrane protein assembly factor BamA;protein_id=WP_012445188.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2075553 2076899 . - . ID=gene-IXO1104_RS09545;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=IXO1104_RS09545;old_locus_tag=IXO1104_09490 NZ_CP047492.1 Protein Homology CDS 2075553 2076899 . - 0 ID=cds-WP_012445187.1;Parent=gene-IXO1104_RS09545;Dbxref=Genbank:WP_012445187.1;Name=WP_012445187.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304858.1;locus_tag=IXO1104_RS09545;product=RIP metalloprotease RseP;protein_id=WP_012445187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2076926 2078116 . - . ID=gene-IXO1104_RS09550;Name=IXO1104_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09550;old_locus_tag=IXO1104_09495 NZ_CP047492.1 Protein Homology CDS 2076926 2078116 . - 0 ID=cds-WP_011258694.1;Parent=gene-IXO1104_RS09550;Dbxref=Genbank:WP_011258694.1;Name=WP_011258694.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485371.1;locus_tag=IXO1104_RS09550;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_011258694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2078119 2078946 . - . ID=gene-IXO1104_RS09555;Name=IXO1104_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09555;old_locus_tag=IXO1104_09500 NZ_CP047492.1 Protein Homology CDS 2078119 2078946 . - 0 ID=cds-WP_011258695.1;Parent=gene-IXO1104_RS09555;Dbxref=Genbank:WP_011258695.1;Name=WP_011258695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258695.1;locus_tag=IXO1104_RS09555;product=phosphatidate cytidylyltransferase;protein_id=WP_011258695.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2078943 2079704 . - . ID=gene-IXO1104_RS09560;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=IXO1104_RS09560;old_locus_tag=IXO1104_09505 NZ_CP047492.1 Protein Homology CDS 2078943 2079704 . - 0 ID=cds-WP_027703358.1;Parent=gene-IXO1104_RS09560;Dbxref=Genbank:WP_027703358.1;Name=WP_027703358.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=IXO1104_RS09560;product=polyprenyl diphosphate synthase;protein_id=WP_027703358.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2079722 2080279 . - . ID=gene-IXO1104_RS09565;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=IXO1104_RS09565;old_locus_tag=IXO1104_09510 NZ_CP047492.1 Protein Homology CDS 2079722 2080279 . - 0 ID=cds-WP_011258697.1;Parent=gene-IXO1104_RS09565;Dbxref=Genbank:WP_011258697.1;Name=WP_011258697.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036562.1;locus_tag=IXO1104_RS09565;product=ribosome recycling factor;protein_id=WP_011258697.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2080460 2081182 . - . ID=gene-IXO1104_RS09570;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=IXO1104_RS09570;old_locus_tag=IXO1104_09515 NZ_CP047492.1 Protein Homology CDS 2080460 2081182 . - 0 ID=cds-WP_011258698.1;Parent=gene-IXO1104_RS09570;Dbxref=Genbank:WP_011258698.1;Name=WP_011258698.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366166.1;locus_tag=IXO1104_RS09570;product=UMP kinase;protein_id=WP_011258698.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2081296 2081451 . - . ID=gene-IXO1104_RS09575;Name=IXO1104_RS09575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09575;partial=true;pseudo=true;start_range=.,2081296 NZ_CP047492.1 Protein Homology CDS 2081296 2081451 . - 0 ID=cds-IXO1104_RS09575;Parent=gene-IXO1104_RS09575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438815.1;locus_tag=IXO1104_RS09575;partial=true;product=HDOD domain-containing protein;pseudo=true;start_range=.,2081296;transl_table=11 NZ_CP047492.1 RefSeq gene 2081744 2082622 . - . ID=gene-IXO1104_RS09580;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=IXO1104_RS09580;old_locus_tag=IXO1104_09525 NZ_CP047492.1 Protein Homology CDS 2081744 2082622 . - 0 ID=cds-WP_011258700.1;Parent=gene-IXO1104_RS09580;Dbxref=Genbank:WP_011258700.1;Name=WP_011258700.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962895.1;locus_tag=IXO1104_RS09580;product=translation elongation factor Ts;protein_id=WP_011258700.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2082792 2083595 . - . ID=gene-IXO1104_RS09585;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09585;old_locus_tag=IXO1104_09530 NZ_CP047492.1 Protein Homology CDS 2082792 2083595 . - 0 ID=cds-WP_011258701.1;Parent=gene-IXO1104_RS09585;Dbxref=Genbank:WP_011258701.1;Name=WP_011258701.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258701.1;locus_tag=IXO1104_RS09585;product=30S ribosomal protein S2;protein_id=WP_011258701.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2083971 2084696 . - . ID=gene-IXO1104_RS09590;Name=IXO1104_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09590;old_locus_tag=IXO1104_09535 NZ_CP047492.1 Protein Homology CDS 2083971 2084696 . - 0 ID=cds-WP_011408326.1;Parent=gene-IXO1104_RS09590;Dbxref=Genbank:WP_011408326.1;Name=WP_011408326.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921629.1;locus_tag=IXO1104_RS09590;product=fimbria/pilus periplasmic chaperone;protein_id=WP_011408326.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2084699 2085031 . - . ID=gene-IXO1104_RS09595;Name=IXO1104_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09595;old_locus_tag=IXO1104_09540 NZ_CP047492.1 Protein Homology CDS 2084699 2085031 . - 0 ID=cds-WP_041182086.1;Parent=gene-IXO1104_RS09595;Dbxref=Genbank:WP_041182086.1;Name=WP_041182086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849735.1;locus_tag=IXO1104_RS09595;product=hypothetical protein;protein_id=WP_041182086.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2085078 2086112 . - . ID=gene-IXO1104_RS09600;Name=IXO1104_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09600;old_locus_tag=IXO1104_09545 NZ_CP047492.1 Protein Homology CDS 2085078 2086112 . - 0 ID=cds-WP_011258703.1;Parent=gene-IXO1104_RS09600;Dbxref=Genbank:WP_011258703.1;Name=WP_011258703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155696.1;locus_tag=IXO1104_RS09600;product=spore coat U domain-containing protein;protein_id=WP_011258703.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2086109 2088460 . - . ID=gene-IXO1104_RS09605;Name=IXO1104_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09605;old_locus_tag=IXO1104_09550 NZ_CP047492.1 Protein Homology CDS 2086109 2088460 . - 0 ID=cds-WP_012445179.1;Parent=gene-IXO1104_RS09605;Dbxref=Genbank:WP_012445179.1;Name=WP_012445179.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169461.1;locus_tag=IXO1104_RS09605;product=fimbria/pilus outer membrane usher protein;protein_id=WP_012445179.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2088477 2089247 . - . ID=gene-IXO1104_RS09610;Name=IXO1104_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09610;old_locus_tag=IXO1104_09555 NZ_CP047492.1 Protein Homology CDS 2088477 2089247 . - 0 ID=cds-WP_075240497.1;Parent=gene-IXO1104_RS09610;Dbxref=Genbank:WP_075240497.1;Name=WP_075240497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089755.1;locus_tag=IXO1104_RS09610;product=molecular chaperone;protein_id=WP_075240497.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2089256 2089807 . - . ID=gene-IXO1104_RS09615;Name=IXO1104_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09615;old_locus_tag=IXO1104_09560 NZ_CP047492.1 Protein Homology CDS 2089256 2089807 . - 0 ID=cds-WP_099051284.1;Parent=gene-IXO1104_RS09615;Dbxref=Genbank:WP_099051284.1;Name=WP_099051284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576696.1;locus_tag=IXO1104_RS09615;product=spore coat U domain-containing protein;protein_id=WP_099051284.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2090100 2090876 . + . ID=gene-IXO1104_RS09620;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=IXO1104_RS09620;old_locus_tag=IXO1104_09565 NZ_CP047492.1 Protein Homology CDS 2090100 2090876 . + 0 ID=cds-WP_011258707.1;Parent=gene-IXO1104_RS09620;Dbxref=Genbank:WP_011258707.1;Name=WP_011258707.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366184.1;locus_tag=IXO1104_RS09620;product=type I methionyl aminopeptidase;protein_id=WP_011258707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2090873 2093482 . + . ID=gene-IXO1104_RS09625;Name=IXO1104_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09625;old_locus_tag=IXO1104_09570 NZ_CP047492.1 Protein Homology CDS 2090873 2093482 . + 0 ID=cds-WP_011408332.1;Parent=gene-IXO1104_RS09625;Dbxref=Genbank:WP_011408332.1;Name=WP_011408332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576698.1;locus_tag=IXO1104_RS09625;product=[protein-PII] uridylyltransferase;protein_id=WP_011408332.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2093499 2094695 . + . ID=gene-IXO1104_RS09630;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=IXO1104_RS09630;old_locus_tag=IXO1104_09575 NZ_CP047492.1 Protein Homology CDS 2093499 2094695 . + 0 ID=cds-WP_012445174.1;Parent=gene-IXO1104_RS09630;Dbxref=Genbank:WP_012445174.1;Name=WP_012445174.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576699.1;locus_tag=IXO1104_RS09630;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_012445174.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2094778 2095098 . + . ID=gene-IXO1104_RS09635;Name=IXO1104_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09635;old_locus_tag=IXO1104_09580 NZ_CP047492.1 Protein Homology CDS 2094778 2095098 . + 0 ID=cds-WP_011408333.1;Parent=gene-IXO1104_RS09635;Dbxref=Genbank:WP_011408333.1;Name=WP_011408333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408333.1;locus_tag=IXO1104_RS09635;product=hypothetical protein;protein_id=WP_011408333.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2095158 2095514 . + . ID=gene-IXO1104_RS09640;Name=IXO1104_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09640;old_locus_tag=IXO1104_09585 NZ_CP047492.1 Protein Homology CDS 2095158 2095514 . + 0 ID=cds-WP_011408334.1;Parent=gene-IXO1104_RS09640;Dbxref=Genbank:WP_011408334.1;Name=WP_011408334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115327.1;locus_tag=IXO1104_RS09640;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_011408334.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2095511 2096011 . + . ID=gene-IXO1104_RS09645;Name=IXO1104_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09645;old_locus_tag=IXO1104_09590 NZ_CP047492.1 Protein Homology CDS 2095511 2096011 . + 0 ID=cds-WP_011408335.1;Parent=gene-IXO1104_RS09645;Dbxref=Genbank:WP_011408335.1;Name=WP_011408335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301347.1;locus_tag=IXO1104_RS09645;product=GNAT family N-acetyltransferase;protein_id=WP_011408335.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2096016 2097146 . + . ID=gene-IXO1104_RS09650;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=IXO1104_RS09650;old_locus_tag=IXO1104_09595 NZ_CP047492.1 Protein Homology CDS 2096016 2097146 . + 0 ID=cds-WP_011408336.1;Parent=gene-IXO1104_RS09650;Dbxref=Genbank:WP_011408336.1;Name=WP_011408336.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346903.1;locus_tag=IXO1104_RS09650;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_011408336.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2097441 2099135 . + . ID=gene-IXO1104_RS09655;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09655;old_locus_tag=IXO1104_09600 NZ_CP047492.1 Protein Homology CDS 2097441 2099135 . + 0 ID=cds-WP_011258712.1;Parent=gene-IXO1104_RS09655;Dbxref=Genbank:WP_011258712.1;Name=WP_011258712.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988264.1;locus_tag=IXO1104_RS09655;product=asparagine synthase B;protein_id=WP_011258712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2099204 2100256 . - . ID=gene-IXO1104_RS09660;Name=IXO1104_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09660;old_locus_tag=IXO1104_09605 NZ_CP047492.1 Protein Homology CDS 2099204 2100256 . - 0 ID=cds-WP_027703366.1;Parent=gene-IXO1104_RS09660;Dbxref=Genbank:WP_027703366.1;Name=WP_027703366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366196.1;locus_tag=IXO1104_RS09660;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_027703366.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2100687 2102813 . - . ID=gene-IXO1104_RS09665;Name=IXO1104_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09665;old_locus_tag=IXO1104_09610 NZ_CP047492.1 Protein Homology CDS 2100687 2102813 . - 0 ID=cds-WP_075240052.1;Parent=gene-IXO1104_RS09665;Dbxref=Genbank:WP_075240052.1;Name=WP_075240052.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925026.1;locus_tag=IXO1104_RS09665;product=TonB-dependent siderophore receptor;protein_id=WP_075240052.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2103393 2104158 . - . ID=gene-IXO1104_RS09670;Name=IXO1104_RS09670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09670;old_locus_tag=IXO1104_09615;pseudo=true NZ_CP047492.1 Protein Homology CDS 2103393 2104158 . - 0 ID=cds-IXO1104_RS09670;Parent=gene-IXO1104_RS09670;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS09670;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2104211 2106628 . - . ID=gene-IXO1104_RS09675;Name=IXO1104_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09675;old_locus_tag=IXO1104_09620 NZ_CP047492.1 Protein Homology CDS 2104211 2106628 . - 0 ID=cds-WP_012445169.1;Parent=gene-IXO1104_RS09675;Dbxref=Genbank:WP_012445169.1;Name=WP_012445169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300242.1;locus_tag=IXO1104_RS09675;product=penicillin acylase family protein;protein_id=WP_012445169.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2106775 2107260 . + . ID=gene-IXO1104_RS09680;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=IXO1104_RS09680;old_locus_tag=IXO1104_09625 NZ_CP047492.1 Protein Homology CDS 2106775 2107260 . + 0 ID=cds-WP_011408338.1;Parent=gene-IXO1104_RS09680;Dbxref=Genbank:WP_011408338.1;Name=WP_011408338.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911751.1;locus_tag=IXO1104_RS09680;product=bacterioferritin;protein_id=WP_011408338.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2107716 2109959 . - . ID=gene-IXO1104_RS09685;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=IXO1104_RS09685;old_locus_tag=IXO1104_09630 NZ_CP047492.1 Protein Homology CDS 2107716 2109959 . - 0 ID=cds-WP_011258717.1;Parent=gene-IXO1104_RS09685;Dbxref=Genbank:WP_011258717.1;Name=WP_011258717.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483492.1;locus_tag=IXO1104_RS09685;product=DNA topoisomerase IV subunit A;protein_id=WP_011258717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2110020 2110871 . - . ID=gene-IXO1104_RS09690;Name=IXO1104_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09690;old_locus_tag=IXO1104_09635 NZ_CP047492.1 Protein Homology CDS 2110020 2110871 . - 0 ID=cds-WP_011258718.1;Parent=gene-IXO1104_RS09690;Dbxref=Genbank:WP_011258718.1;Name=WP_011258718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463002.1;locus_tag=IXO1104_RS09690;product=helix-turn-helix transcriptional regulator;protein_id=WP_011258718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2110993 2111433 . + . ID=gene-IXO1104_RS09695;Name=IXO1104_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09695;old_locus_tag=IXO1104_09640 NZ_CP047492.1 Protein Homology CDS 2110993 2111433 . + 0 ID=cds-WP_012445167.1;Parent=gene-IXO1104_RS09695;Dbxref=Genbank:WP_012445167.1;Name=WP_012445167.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089765.1;locus_tag=IXO1104_RS09695;product=MarR family transcriptional regulator;protein_id=WP_012445167.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2111475 2112947 . + . ID=gene-IXO1104_RS09700;Name=IXO1104_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09700;old_locus_tag=IXO1104_09645 NZ_CP047492.1 Protein Homology CDS 2111475 2112947 . + 0 ID=cds-WP_171970799.1;Parent=gene-IXO1104_RS09700;Dbxref=Genbank:WP_171970799.1;Name=WP_171970799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117698.1;locus_tag=IXO1104_RS09700;product=AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor;protein_id=WP_171970799.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2112958 2114151 . + . ID=gene-IXO1104_RS09705;Name=IXO1104_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09705;old_locus_tag=IXO1104_09650 NZ_CP047492.1 Protein Homology CDS 2112958 2114151 . + 0 ID=cds-WP_027703877.1;Parent=gene-IXO1104_RS09705;Dbxref=Genbank:WP_027703877.1;Name=WP_027703877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168701.1;locus_tag=IXO1104_RS09705;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_027703877.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2114158 2115738 . + . ID=gene-IXO1104_RS09710;Name=IXO1104_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09710;old_locus_tag=IXO1104_09655 NZ_CP047492.1 Protein Homology CDS 2114158 2115738 . + 0 ID=cds-WP_011258722.1;Parent=gene-IXO1104_RS09710;Dbxref=Genbank:WP_011258722.1;Name=WP_011258722.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919973.1;locus_tag=IXO1104_RS09710;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_011258722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2115789 2116523 . + . ID=gene-IXO1104_RS09715;Name=IXO1104_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09715;old_locus_tag=IXO1104_09660 NZ_CP047492.1 Protein Homology CDS 2115789 2116523 . + 0 ID=cds-WP_027703878.1;Parent=gene-IXO1104_RS09715;Dbxref=Genbank:WP_027703878.1;Name=WP_027703878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258723.1;locus_tag=IXO1104_RS09715;product=serine hydrolase;protein_id=WP_027703878.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2116520 2117283 . - . ID=gene-IXO1104_RS09720;Name=IXO1104_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09720;old_locus_tag=IXO1104_09665 NZ_CP047492.1 Protein Homology CDS 2116968 2117283 . - 0 ID=cds-WP_099051283.1;Parent=gene-IXO1104_RS09720;Dbxref=Genbank:WP_099051283.1;Name=WP_099051283.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS09720;product=IS5 family transposase;protein_id=WP_099051283.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2116520 2116968 . - 2 ID=cds-WP_099051283.1;Parent=gene-IXO1104_RS09720;Dbxref=Genbank:WP_099051283.1;Name=WP_099051283.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS09720;product=IS5 family transposase;protein_id=WP_099051283.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2117478 2117726 . + . ID=gene-IXO1104_RS09725;Name=IXO1104_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09725;old_locus_tag=IXO1104_09670 NZ_CP047492.1 Protein Homology CDS 2117478 2117726 . + 0 ID=cds-WP_011258724.1;Parent=gene-IXO1104_RS09725;Dbxref=Genbank:WP_011258724.1;Name=WP_011258724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155755.1;locus_tag=IXO1104_RS09725;product=hypothetical protein;protein_id=WP_011258724.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2118082 2119089 . - . ID=gene-IXO1104_RS09730;Name=IXO1104_RS09730;end_range=2119089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09730;old_locus_tag=IXO1104_09675;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2118082 2119089 . - 0 ID=cds-IXO1104_RS09730;Parent=gene-IXO1104_RS09730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2119089,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1104_RS09730;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2119172 2120137 . - . ID=gene-IXO1104_RS09735;Name=IXO1104_RS09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09735;old_locus_tag=IXO1104_09680;pseudo=true NZ_CP047492.1 Protein Homology CDS 2119172 2120137 . - 0 ID=cds-IXO1104_RS09735;Parent=gene-IXO1104_RS09735;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS09735;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2120216 2121181 . - . ID=gene-IXO1104_RS09740;Name=IXO1104_RS09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09740;old_locus_tag=IXO1104_09685;pseudo=true NZ_CP047492.1 Protein Homology CDS 2120216 2121181 . - 0 ID=cds-IXO1104_RS09740;Parent=gene-IXO1104_RS09740;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1104_RS09740;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2121235 2121501 . + . ID=gene-IXO1104_RS09745;Name=IXO1104_RS09745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09745;old_locus_tag=IXO1104_09690;partial=true;pseudo=true;start_range=.,2121235 NZ_CP047492.1 Protein Homology CDS 2121235 2121501 . + 0 ID=cds-IXO1104_RS09745;Parent=gene-IXO1104_RS09745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363506.1;locus_tag=IXO1104_RS09745;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2121235;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2121491 2122736 . + . ID=gene-IXO1104_RS09750;Name=IXO1104_RS09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09750;old_locus_tag=IXO1104_09695;pseudo=true NZ_CP047492.1 Protein Homology CDS 2121491 2122736 . + 0 ID=cds-IXO1104_RS09750;Parent=gene-IXO1104_RS09750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848791.1;locus_tag=IXO1104_RS09750;product=glycosyl transferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2122773 2124689 . - . ID=gene-IXO1104_RS09755;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=IXO1104_RS09755;old_locus_tag=IXO1104_09700 NZ_CP047492.1 Protein Homology CDS 2122773 2124689 . - 0 ID=cds-WP_011258730.1;Parent=gene-IXO1104_RS09755;Dbxref=Genbank:WP_011258730.1;Name=WP_011258730.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037575.1;locus_tag=IXO1104_RS09755;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_011258730.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2125087 2125776 . - . ID=gene-IXO1104_RS09760;Name=IXO1104_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09760;old_locus_tag=IXO1104_09705 NZ_CP047492.1 Protein Homology CDS 2125087 2125776 . - 0 ID=cds-WP_075239812.1;Parent=gene-IXO1104_RS09760;Dbxref=Genbank:WP_075239812.1;Name=WP_075239812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258731.1;locus_tag=IXO1104_RS09760;product=HNH endonuclease;protein_id=WP_075239812.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2126049 2127842 . - . ID=gene-IXO1104_RS09765;Name=IXO1104_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09765;old_locus_tag=IXO1104_09710 NZ_CP047492.1 Protein Homology CDS 2126049 2127842 . - 0 ID=cds-WP_075239811.1;Parent=gene-IXO1104_RS09765;Dbxref=Genbank:WP_075239811.1;Name=WP_075239811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258732.1;locus_tag=IXO1104_RS09765;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_075239811.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2127880 2128356 . - . ID=gene-IXO1104_RS09770;Name=IXO1104_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09770;old_locus_tag=IXO1104_09715 NZ_CP047492.1 Protein Homology CDS 2127880 2128356 . - 0 ID=cds-WP_011258733.1;Parent=gene-IXO1104_RS09770;Dbxref=Genbank:WP_011258733.1;Name=WP_011258733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448491.1;locus_tag=IXO1104_RS09770;product=LEA type 2 family protein;protein_id=WP_011258733.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2128401 2128925 . + . ID=gene-IXO1104_RS09775;Name=IXO1104_RS09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09775;old_locus_tag=IXO1104_09720;partial=true;pseudo=true;start_range=.,2128401 NZ_CP047492.1 Protein Homology CDS 2128401 2128925 . + 0 ID=cds-IXO1104_RS09775;Parent=gene-IXO1104_RS09775;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163234.1;locus_tag=IXO1104_RS09775;partial=true;product=S8 family serine peptidase;pseudo=true;start_range=.,2128401;transl_table=11 NZ_CP047492.1 RefSeq gene 2129069 2129572 . - . ID=gene-IXO1104_RS09780;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09780;old_locus_tag=IXO1104_09725 NZ_CP047492.1 Protein Homology CDS 2129069 2129572 . - 0 ID=cds-WP_011258734.1;Parent=gene-IXO1104_RS09780;Dbxref=Genbank:WP_011258734.1;Name=WP_011258734.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050971.1;locus_tag=IXO1104_RS09780;product=SsrA-binding protein SmpB;protein_id=WP_011258734.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2129633 2130064 . + . ID=gene-IXO1104_RS09785;Name=IXO1104_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09785;old_locus_tag=IXO1104_09730 NZ_CP047492.1 Protein Homology CDS 2129633 2130064 . + 0 ID=cds-WP_011258735.1;Parent=gene-IXO1104_RS09785;Dbxref=Genbank:WP_011258735.1;Name=WP_011258735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901567.1;locus_tag=IXO1104_RS09785;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_011258735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2130078 2130353 . + . ID=gene-IXO1104_RS09790;Name=IXO1104_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09790;old_locus_tag=IXO1104_09735 NZ_CP047492.1 Protein Homology CDS 2130078 2130353 . + 0 ID=cds-WP_011408349.1;Parent=gene-IXO1104_RS09790;Dbxref=Genbank:WP_011408349.1;Name=WP_011408349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258736.1;locus_tag=IXO1104_RS09790;product=RnfH family protein;protein_id=WP_011408349.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2130700 2131095 . - . ID=gene-IXO1104_RS09795;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=IXO1104_RS09795;old_locus_tag=IXO1104_09740 NZ_CP047492.1 Protein Homology CDS 2130700 2131095 . - 0 ID=cds-WP_011258737.1;Parent=gene-IXO1104_RS09795;Dbxref=Genbank:WP_011258737.1;Name=WP_011258737.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449455.1;locus_tag=IXO1104_RS09795;product=outer membrane protein assembly factor BamE;protein_id=WP_011258737.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2131200 2131610 . + . ID=gene-IXO1104_RS09800;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=IXO1104_RS09800;old_locus_tag=IXO1104_09745 NZ_CP047492.1 Protein Homology CDS 2131200 2131610 . + 0 ID=cds-WP_011408351.1;Parent=gene-IXO1104_RS09800;Dbxref=Genbank:WP_011408351.1;Name=WP_011408351.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=IXO1104_RS09800;product=ferric iron uptake transcriptional regulator;protein_id=WP_011408351.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2132053 2133717 . - . ID=gene-IXO1104_RS09805;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=IXO1104_RS09805;old_locus_tag=IXO1104_09750 NZ_CP047492.1 Protein Homology CDS 2132053 2133717 . - 0 ID=cds-WP_012445154.1;Parent=gene-IXO1104_RS09805;Dbxref=Genbank:WP_012445154.1;Name=WP_012445154.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408352.1;locus_tag=IXO1104_RS09805;product=DNA repair protein RecN;protein_id=WP_012445154.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2133855 2134886 . + . ID=gene-IXO1104_RS09810;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=IXO1104_RS09810;old_locus_tag=IXO1104_09755 NZ_CP047492.1 Protein Homology CDS 2133855 2134886 . + 0 ID=cds-WP_012445153.1;Parent=gene-IXO1104_RS09810;Dbxref=Genbank:WP_012445153.1;Name=WP_012445153.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483631.1;locus_tag=IXO1104_RS09810;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_012445153.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2134987 2135505 . + . ID=gene-IXO1104_RS09815;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=IXO1104_RS09815;old_locus_tag=IXO1104_09760 NZ_CP047492.1 Protein Homology CDS 2134987 2135505 . + 0 ID=cds-WP_011258741.1;Parent=gene-IXO1104_RS09815;Dbxref=Genbank:WP_011258741.1;Name=WP_011258741.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=IXO1104_RS09815;product=nucleotide exchange factor GrpE;protein_id=WP_011258741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2135647 2137572 . + . ID=gene-IXO1104_RS09820;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=IXO1104_RS09820;old_locus_tag=IXO1104_09765 NZ_CP047492.1 Protein Homology CDS 2135647 2137572 . + 0 ID=cds-WP_075240558.1;Parent=gene-IXO1104_RS09820;Dbxref=Genbank:WP_075240558.1;Name=WP_075240558.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380232.1;locus_tag=IXO1104_RS09820;product=molecular chaperone DnaK;protein_id=WP_075240558.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2137732 2138862 . + . ID=gene-IXO1104_RS09825;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS09825;old_locus_tag=IXO1104_09770 NZ_CP047492.1 Protein Homology CDS 2137732 2138862 . + 0 ID=cds-WP_011258743.1;Parent=gene-IXO1104_RS09825;Dbxref=Genbank:WP_011258743.1;Name=WP_011258743.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438731.1;locus_tag=IXO1104_RS09825;product=molecular chaperone DnaJ;protein_id=WP_011258743.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2139393 2140301 . + . ID=gene-IXO1104_RS09830;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=IXO1104_RS09830;old_locus_tag=IXO1104_09775 NZ_CP047492.1 Protein Homology CDS 2139393 2140301 . + 0 ID=cds-WP_075240559.1;Parent=gene-IXO1104_RS09830;Dbxref=Genbank:WP_075240559.1;Name=WP_075240559.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804365.1;locus_tag=IXO1104_RS09830;product=pyridoxal kinase;protein_id=WP_075240559.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2140298 2141419 . + . ID=gene-IXO1104_RS09835;Name=IXO1104_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09835;old_locus_tag=IXO1104_09780 NZ_CP047492.1 Protein Homology CDS 2140298 2141419 . + 0 ID=cds-WP_053503592.1;Parent=gene-IXO1104_RS09835;Dbxref=Genbank:WP_053503592.1;Name=WP_053503592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502753.1;locus_tag=IXO1104_RS09835;product=prephenate dehydrogenase;protein_id=WP_053503592.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2141789 2143108 . - . ID=gene-IXO1104_RS09840;Name=IXO1104_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09840;old_locus_tag=IXO1104_09785 NZ_CP047492.1 Protein Homology CDS 2141789 2143108 . - 0 ID=cds-WP_109182117.1;Parent=gene-IXO1104_RS09840;Dbxref=Genbank:WP_109182117.1;Name=WP_109182117.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS09840;product=IS701 family transposase;protein_id=WP_109182117.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2143443 2144555 . - . ID=gene-IXO1104_RS09845;Name=IXO1104_RS09845;end_range=2144555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09845;old_locus_tag=IXO1104_09790;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2143443 2144555 . - 0 ID=cds-IXO1104_RS09845;Parent=gene-IXO1104_RS09845;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0015562;end_range=2144555,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380228.1;locus_tag=IXO1104_RS09845;partial=true;product=TolC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2144553 2145201 . - . ID=gene-IXO1104_RS09850;Name=IXO1104_RS09850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09850;old_locus_tag=IXO1104_09795;partial=true;pseudo=true;start_range=.,2144553 NZ_CP047492.1 Protein Homology CDS 2144553 2145201 . - 0 ID=cds-IXO1104_RS09850;Parent=gene-IXO1104_RS09850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964693.1;locus_tag=IXO1104_RS09850;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,2144553;transl_table=11 NZ_CP047492.1 RefSeq gene 2145268 2145342 . - . ID=gene-IXO1104_RS09855;Name=IXO1104_RS09855;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09855;old_locus_tag=IXO1104_09805 NZ_CP047492.1 cmsearch ncRNA 2145268 2145342 . - . ID=rna-IXO1104_RS09855;Parent=gene-IXO1104_RS09855;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09855;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2145268 2145342 . - . ID=exon-IXO1104_RS09855-1;Parent=rna-IXO1104_RS09855;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09855;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2145443 2147212 . - . ID=gene-IXO1104_RS09860;Name=IXO1104_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09860;old_locus_tag=IXO1104_09810 NZ_CP047492.1 Protein Homology CDS 2145443 2147212 . - 0 ID=cds-WP_011408359.1;Parent=gene-IXO1104_RS09860;Dbxref=Genbank:WP_011408359.1;Name=WP_011408359.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156786.1;locus_tag=IXO1104_RS09860;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_011408359.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2147209 2147811 . - . ID=gene-IXO1104_RS09865;Name=IXO1104_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09865;old_locus_tag=IXO1104_09815 NZ_CP047492.1 Protein Homology CDS 2147209 2147811 . - 0 ID=cds-WP_041183174.1;Parent=gene-IXO1104_RS09865;Dbxref=Genbank:WP_041183174.1;Name=WP_041183174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156787.1;locus_tag=IXO1104_RS09865;product=IMPACT family protein;protein_id=WP_041183174.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2148070 2148663 . - . ID=gene-IXO1104_RS09870;Name=IXO1104_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09870;old_locus_tag=IXO1104_09820 NZ_CP047492.1 Protein Homology CDS 2148070 2148663 . - 0 ID=cds-WP_044756895.1;Parent=gene-IXO1104_RS09870;Dbxref=Genbank:WP_044756895.1;Name=WP_044756895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366391.1;locus_tag=IXO1104_RS09870;product=TIGR00730 family Rossman fold protein;protein_id=WP_044756895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2148862 2150298 . - . ID=gene-IXO1104_RS09875;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=IXO1104_RS09875;old_locus_tag=IXO1104_09825 NZ_CP047492.1 Protein Homology CDS 2148862 2150298 . - 0 ID=cds-WP_027703750.1;Parent=gene-IXO1104_RS09875;Dbxref=Genbank:WP_027703750.1;Name=WP_027703750.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988423.1;locus_tag=IXO1104_RS09875;product=dihydrolipoyl dehydrogenase;protein_id=WP_027703750.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2150540 2151742 . - . ID=gene-IXO1104_RS09880;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09880;old_locus_tag=IXO1104_09830 NZ_CP047492.1 Protein Homology CDS 2150540 2151742 . - 0 ID=cds-WP_027703749.1;Parent=gene-IXO1104_RS09880;Dbxref=Genbank:WP_027703749.1;Name=WP_027703749.1;Ontology_term=GO:0006099,GO:0006554,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572000.1;locus_tag=IXO1104_RS09880;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_027703749.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2151785 2154613 . - . ID=gene-IXO1104_RS09885;Name=IXO1104_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09885;old_locus_tag=IXO1104_09835 NZ_CP047492.1 Protein Homology CDS 2151785 2154613 . - 0 ID=cds-WP_027703748.1;Parent=gene-IXO1104_RS09885;Dbxref=Genbank:WP_027703748.1;Name=WP_027703748.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507330.1;locus_tag=IXO1104_RS09885;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_027703748.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2154794 2155726 . - . ID=gene-IXO1104_RS09890;Name=IXO1104_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09890;old_locus_tag=IXO1104_09840 NZ_CP047492.1 Protein Homology CDS 2154794 2155726 . - 0 ID=cds-WP_075239930.1;Parent=gene-IXO1104_RS09890;Dbxref=Genbank:WP_075239930.1;Name=WP_075239930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571998.1;locus_tag=IXO1104_RS09890;product=GNAT family N-acetyltransferase;protein_id=WP_075239930.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2155723 2157219 . - . ID=gene-IXO1104_RS09895;Name=IXO1104_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09895;old_locus_tag=IXO1104_09845 NZ_CP047492.1 Protein Homology CDS 2155723 2157219 . - 0 ID=cds-WP_012445147.1;Parent=gene-IXO1104_RS09895;Dbxref=Genbank:WP_012445147.1;Name=WP_012445147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118789.1;locus_tag=IXO1104_RS09895;product=cupin domain-containing protein;protein_id=WP_012445147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2157557 2157820 . + . ID=gene-IXO1104_RS09900;Name=IXO1104_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09900;old_locus_tag=IXO1104_09850 NZ_CP047492.1 Protein Homology CDS 2157557 2157820 . + 0 ID=cds-WP_027703747.1;Parent=gene-IXO1104_RS09900;Dbxref=Genbank:WP_027703747.1;Name=WP_027703747.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156794.1;locus_tag=IXO1104_RS09900;product=PDZ domain-containing protein;protein_id=WP_027703747.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2157837 2157912 . - . ID=gene-IXO1104_RS09905;Name=IXO1104_RS09905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS09905;old_locus_tag=IXO1104_09855 NZ_CP047492.1 cmsearch ncRNA 2157837 2157912 . - . ID=rna-IXO1104_RS09905;Parent=gene-IXO1104_RS09905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09905;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2157837 2157912 . - . ID=exon-IXO1104_RS09905-1;Parent=rna-IXO1104_RS09905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS09905;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2158100 2158600 . - . ID=gene-IXO1104_RS09910;Name=IXO1104_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09910;old_locus_tag=IXO1104_09860 NZ_CP047492.1 Protein Homology CDS 2158100 2158600 . - 0 ID=cds-WP_011258758.1;Parent=gene-IXO1104_RS09910;Dbxref=Genbank:WP_011258758.1;Name=WP_011258758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346970.1;locus_tag=IXO1104_RS09910;product=DUF3060 domain-containing protein;protein_id=WP_011258758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2158852 2160219 . - . ID=gene-IXO1104_RS09915;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=IXO1104_RS09915;old_locus_tag=IXO1104_09865 NZ_CP047492.1 Protein Homology CDS 2158852 2160219 . - 0 ID=cds-WP_011258759.1;Parent=gene-IXO1104_RS09915;Dbxref=Genbank:WP_011258759.1;Name=WP_011258759.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156796.1;locus_tag=IXO1104_RS09915;product=adenylosuccinate lyase;protein_id=WP_011258759.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2160417 2161270 . + . ID=gene-IXO1104_RS09920;Name=IXO1104_RS09920;end_range=2161270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09920;old_locus_tag=IXO1104_09870;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2160417 2161270 . + 0 ID=cds-IXO1104_RS09920;Parent=gene-IXO1104_RS09920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2161270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118792.1;locus_tag=IXO1104_RS09920;partial=true;product=CAP domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2161272 2162112 . - . ID=gene-IXO1104_RS09925;Name=IXO1104_RS09925;end_range=2162112,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09925;old_locus_tag=IXO1104_09875;partial=true;pseudo=true;start_range=.,2161272 NZ_CP047492.1 Protein Homology CDS 2161272 2162112 . - 0 ID=cds-IXO1104_RS09925;Parent=gene-IXO1104_RS09925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2162112,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156798.1;locus_tag=IXO1104_RS09925;partial=true;product=hemolysin family protein;pseudo=true;start_range=.,2161272;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2162168 2163227 . + . ID=gene-IXO1104_RS09930;Name=IXO1104_RS09930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09930;old_locus_tag=IXO1104_09880;pseudo=true NZ_CP047492.1 Protein Homology CDS 2162168 2163227 . + 0 ID=cds-IXO1104_RS09930;Parent=gene-IXO1104_RS09930;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=IXO1104_RS09930;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2163242 2164005 . + . ID=gene-IXO1104_RS09935;Name=IXO1104_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09935;old_locus_tag=IXO1104_09885 NZ_CP047492.1 Protein Homology CDS 2163242 2163557 . + 0 ID=cds-WP_094187736.1-3;Parent=gene-IXO1104_RS09935;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS09935;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2163557 2164005 . + 2 ID=cds-WP_094187736.1-3;Parent=gene-IXO1104_RS09935;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS09935;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2164318 2165334 . - . ID=gene-IXO1104_RS09940;Name=IXO1104_RS09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09940;old_locus_tag=IXO1104_09895;pseudo=true NZ_CP047492.1 Protein Homology CDS 2164318 2165334 . - 0 ID=cds-IXO1104_RS09940;Parent=gene-IXO1104_RS09940;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1104_RS09940;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2165457 2166860 . + . ID=gene-IXO1104_RS09945;Name=IXO1104_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09945;old_locus_tag=IXO1104_09900 NZ_CP047492.1 Protein Homology CDS 2165457 2166860 . + 0 ID=cds-WP_011408367.1;Parent=gene-IXO1104_RS09945;Dbxref=Genbank:WP_011408367.1;Name=WP_011408367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346974.1;locus_tag=IXO1104_RS09945;product=class II fumarate hydratase;protein_id=WP_011408367.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2166983 2167405 . - . ID=gene-IXO1104_RS09950;Name=IXO1104_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09950;old_locus_tag=IXO1104_09905 NZ_CP047492.1 Protein Homology CDS 2166983 2167405 . - 0 ID=cds-WP_027703710.1;Parent=gene-IXO1104_RS09950;Dbxref=Genbank:WP_027703710.1;Name=WP_027703710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159043.1;locus_tag=IXO1104_RS09950;product=hypothetical protein;protein_id=WP_027703710.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2167791 2167982 . - . ID=gene-IXO1104_RS09955;Name=IXO1104_RS09955;end_range=2167982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS09955;old_locus_tag=IXO1104_09910;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2167791 2167982 . - 0 ID=cds-IXO1104_RS09955;Parent=gene-IXO1104_RS09955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2167982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578096.1;locus_tag=IXO1104_RS09955;partial=true;product=YggN family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2168038 2168874 . - . ID=gene-IXO1104_RS09960;Name=IXO1104_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09960;old_locus_tag=IXO1104_09915 NZ_CP047492.1 Protein Homology CDS 2168038 2168874 . - 0 ID=cds-WP_027703709.1;Parent=gene-IXO1104_RS09960;Dbxref=Genbank:WP_027703709.1;Name=WP_027703709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849098.1;locus_tag=IXO1104_RS09960;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_027703709.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2168884 2169870 . - . ID=gene-IXO1104_RS09965;Name=IXO1104_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09965;old_locus_tag=IXO1104_09920 NZ_CP047492.1 Protein Homology CDS 2168884 2169870 . - 0 ID=cds-WP_044756884.1;Parent=gene-IXO1104_RS09965;Dbxref=Genbank:WP_044756884.1;Name=WP_044756884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036684.1;locus_tag=IXO1104_RS09965;product=hypothetical protein;protein_id=WP_044756884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2169867 2170742 . - . ID=gene-IXO1104_RS09970;Name=IXO1104_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09970;old_locus_tag=IXO1104_09925 NZ_CP047492.1 Protein Homology CDS 2169867 2170742 . - 0 ID=cds-WP_012445132.1;Parent=gene-IXO1104_RS09970;Dbxref=Genbank:WP_012445132.1;Name=WP_012445132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913764.1;locus_tag=IXO1104_RS09970;product=ABC transporter ATP-binding protein;protein_id=WP_012445132.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2170739 2171101 . - . ID=gene-IXO1104_RS09975;Name=IXO1104_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09975;old_locus_tag=IXO1104_09930 NZ_CP047492.1 Protein Homology CDS 2170739 2171101 . - 0 ID=cds-WP_014502778.1;Parent=gene-IXO1104_RS09975;Dbxref=Genbank:WP_014502778.1;Name=WP_014502778.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988451.1;locus_tag=IXO1104_RS09975;product=GntR family transcriptional regulator;protein_id=WP_014502778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2171104 2171352 . - . ID=gene-IXO1104_RS09980;Name=IXO1104_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09980;old_locus_tag=IXO1104_09935 NZ_CP047492.1 Protein Homology CDS 2171104 2171352 . - 0 ID=cds-WP_042464800.1;Parent=gene-IXO1104_RS09980;Dbxref=Genbank:WP_042464800.1;Name=WP_042464800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366438.1;locus_tag=IXO1104_RS09980;product=hypothetical protein;protein_id=WP_042464800.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2171488 2172045 . + . ID=gene-IXO1104_RS09985;Name=IXO1104_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09985;old_locus_tag=IXO1104_09940 NZ_CP047492.1 Protein Homology CDS 2171488 2172045 . + 0 ID=cds-WP_011408372.1;Parent=gene-IXO1104_RS09985;Dbxref=Genbank:WP_011408372.1;Name=WP_011408372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963377.1;locus_tag=IXO1104_RS09985;product=glutathione peroxidase;protein_id=WP_011408372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2172046 2172267 . + . ID=gene-IXO1104_RS09990;Name=IXO1104_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09990 NZ_CP047492.1 GeneMarkS-2+ CDS 2172046 2172267 . + 0 ID=cds-WP_228329768.1;Parent=gene-IXO1104_RS09990;Dbxref=Genbank:WP_228329768.1;Name=WP_228329768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS09990;product=hypothetical protein;protein_id=WP_228329768.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2172176 2173102 . + . ID=gene-IXO1104_RS09995;Name=IXO1104_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS09995;old_locus_tag=IXO1104_09945 NZ_CP047492.1 Protein Homology CDS 2172176 2173102 . + 0 ID=cds-WP_228329759.1;Parent=gene-IXO1104_RS09995;Dbxref=Genbank:WP_228329759.1;Name=WP_228329759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380182.1;locus_tag=IXO1104_RS09995;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_228329759.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2173128 2174477 . + . ID=gene-IXO1104_RS10000;Name=IXO1104_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10000;old_locus_tag=IXO1104_09950 NZ_CP047492.1 Protein Homology CDS 2173128 2174477 . + 0 ID=cds-WP_011258776.1;Parent=gene-IXO1104_RS10000;Dbxref=Genbank:WP_011258776.1;Name=WP_011258776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804407.1;locus_tag=IXO1104_RS10000;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_011258776.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2174470 2174706 . + . ID=gene-IXO1104_RS10005;Name=IXO1104_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10005;old_locus_tag=IXO1104_09955 NZ_CP047492.1 Protein Homology CDS 2174470 2174706 . + 0 ID=cds-WP_011258777.1;Parent=gene-IXO1104_RS10005;Dbxref=Genbank:WP_011258777.1;Name=WP_011258777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036690.1;locus_tag=IXO1104_RS10005;product=SlyX family protein;protein_id=WP_011258777.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2174707 2175459 . + . ID=gene-IXO1104_RS10010;Name=IXO1104_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10010;old_locus_tag=IXO1104_09960 NZ_CP047492.1 Protein Homology CDS 2174707 2175459 . + 0 ID=cds-WP_011258778.1;Parent=gene-IXO1104_RS10010;Dbxref=Genbank:WP_011258778.1;Name=WP_011258778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463037.1;locus_tag=IXO1104_RS10010;product=DUF2058 family protein;protein_id=WP_011258778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2175793 2176638 . + . ID=gene-IXO1104_RS10015;Name=IXO1104_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10015;old_locus_tag=IXO1104_09965 NZ_CP047492.1 Protein Homology CDS 2175793 2176638 . + 0 ID=cds-WP_027703705.1;Parent=gene-IXO1104_RS10015;Dbxref=Genbank:WP_027703705.1;Name=WP_027703705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156809.1;locus_tag=IXO1104_RS10015;product=transporter;protein_id=WP_027703705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2176779 2177954 . + . ID=gene-IXO1104_RS10020;Name=IXO1104_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10020;old_locus_tag=IXO1104_09970 NZ_CP047492.1 Protein Homology CDS 2176779 2177954 . + 0 ID=cds-WP_027703704.1;Parent=gene-IXO1104_RS10020;Dbxref=Genbank:WP_027703704.1;Name=WP_027703704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156810.1;locus_tag=IXO1104_RS10020;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_027703704.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2177968 2179278 . + . ID=gene-IXO1104_RS10025;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IXO1104_RS10025;old_locus_tag=IXO1104_09975 NZ_CP047492.1 Protein Homology CDS 2177968 2179278 . + 0 ID=cds-WP_011258781.1;Parent=gene-IXO1104_RS10025;Dbxref=Genbank:WP_011258781.1;Name=WP_011258781.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408378.1;locus_tag=IXO1104_RS10025;product=L-fucose:H+ symporter permease;protein_id=WP_011258781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2179275 2180261 . + . ID=gene-IXO1104_RS10030;Name=IXO1104_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10030;old_locus_tag=IXO1104_09980 NZ_CP047492.1 Protein Homology CDS 2179275 2180261 . + 0 ID=cds-WP_012445125.1;Parent=gene-IXO1104_RS10030;Dbxref=Genbank:WP_012445125.1;Name=WP_012445125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483712.1;locus_tag=IXO1104_RS10030;product=carbohydrate kinase;protein_id=WP_012445125.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2180258 2181463 . + . ID=gene-IXO1104_RS10035;Name=IXO1104_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10035;old_locus_tag=IXO1104_09985 NZ_CP047492.1 Protein Homology CDS 2180258 2181463 . + 0 ID=cds-WP_011258783.1;Parent=gene-IXO1104_RS10035;Dbxref=Genbank:WP_011258783.1;Name=WP_011258783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258783.1;locus_tag=IXO1104_RS10035;product=AGE family epimerase/isomerase;protein_id=WP_011258783.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2181560 2182516 . + . ID=gene-IXO1104_RS10040;Name=IXO1104_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10040;old_locus_tag=IXO1104_09990 NZ_CP047492.1 Protein Homology CDS 2181560 2182516 . + 0 ID=cds-WP_154741193.1;Parent=gene-IXO1104_RS10040;Dbxref=Genbank:WP_154741193.1;Name=WP_154741193.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS10040;product=IS30 family transposase;protein_id=WP_154741193.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2182908 2185661 . - . ID=gene-IXO1104_RS10045;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=IXO1104_RS10045;old_locus_tag=IXO1104_09995 NZ_CP047492.1 Protein Homology CDS 2182908 2185661 . - 0 ID=cds-WP_012445124.1;Parent=gene-IXO1104_RS10045;Dbxref=Genbank:WP_012445124.1;Name=WP_012445124.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160303.1;locus_tag=IXO1104_RS10045;product=methionine synthase;protein_id=WP_012445124.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2185804 2186943 . - . ID=gene-IXO1104_RS10050;Name=IXO1104_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10050;old_locus_tag=IXO1104_10000 NZ_CP047492.1 Protein Homology CDS 2185804 2186943 . - 0 ID=cds-WP_011258785.1;Parent=gene-IXO1104_RS10050;Dbxref=Genbank:WP_011258785.1;Name=WP_011258785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380164.1;locus_tag=IXO1104_RS10050;product=homocysteine S-methyltransferase family protein;protein_id=WP_011258785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2186940 2187935 . - . ID=gene-IXO1104_RS10055;Name=IXO1104_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10055;old_locus_tag=IXO1104_10005 NZ_CP047492.1 Protein Homology CDS 2186940 2187935 . - 0 ID=cds-WP_011258786.1;Parent=gene-IXO1104_RS10055;Dbxref=Genbank:WP_011258786.1;Name=WP_011258786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164067.1;locus_tag=IXO1104_RS10055;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_011258786.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2188024 2189205 . + . ID=gene-IXO1104_RS10060;Name=IXO1104_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10060;old_locus_tag=IXO1104_10010 NZ_CP047492.1 Protein Homology CDS 2188024 2189205 . + 0 ID=cds-WP_027703703.1;Parent=gene-IXO1104_RS10060;Dbxref=Genbank:WP_027703703.1;Name=WP_027703703.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156817.1;locus_tag=IXO1104_RS10060;product=acyl-CoA dehydrogenase family protein;protein_id=WP_027703703.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2189205 2189345 . + . ID=gene-IXO1104_RS10065;Name=IXO1104_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10065;old_locus_tag=IXO1104_10015 NZ_CP047492.1 Protein Homology CDS 2189205 2189345 . + 0 ID=cds-WP_011258788.1;Parent=gene-IXO1104_RS10065;Dbxref=Genbank:WP_011258788.1;Name=WP_011258788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301939.1;locus_tag=IXO1104_RS10065;product=acyl-CoA dehydrogenase;protein_id=WP_011258788.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2189408 2189484 . + . ID=gene-IXO1104_RS10070;Name=IXO1104_RS10070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10070;old_locus_tag=IXO1104_10020 NZ_CP047492.1 cmsearch ncRNA 2189408 2189484 . + . ID=rna-IXO1104_RS10070;Parent=gene-IXO1104_RS10070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10070;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2189408 2189484 . + . ID=exon-IXO1104_RS10070-1;Parent=rna-IXO1104_RS10070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10070;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2189639 2191162 . + . ID=gene-IXO1104_RS10075;Name=IXO1104_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10075;old_locus_tag=IXO1104_10025 NZ_CP047492.1 Protein Homology CDS 2189639 2191162 . + 0 ID=cds-WP_173425341.1;Parent=gene-IXO1104_RS10075;Dbxref=Genbank:WP_173425341.1;Name=WP_173425341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438702.1;locus_tag=IXO1104_RS10075;product=platelet-activating factor acetylhydrolase IB subunit;protein_id=WP_173425341.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2191521 2191607 . - . ID=gene-IXO1104_RS10080;Name=IXO1104_RS10080;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS10080;old_locus_tag=IXO1104_10030 NZ_CP047492.1 tRNAscan-SE tRNA 2191521 2191607 . - . ID=rna-IXO1104_RS10080;Parent=gene-IXO1104_RS10080;anticodon=(pos:complement(2191571..2191573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS10080;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 2191521 2191607 . - . ID=exon-IXO1104_RS10080-1;Parent=rna-IXO1104_RS10080;anticodon=(pos:complement(2191571..2191573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS10080;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 2191729 2194257 . + . ID=gene-IXO1104_RS10085;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=IXO1104_RS10085;old_locus_tag=IXO1104_10035 NZ_CP047492.1 Protein Homology CDS 2191729 2194257 . + 0 ID=cds-WP_012445121.1;Parent=gene-IXO1104_RS10085;Dbxref=Genbank:WP_012445121.1;Name=WP_012445121.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445121.1;locus_tag=IXO1104_RS10085;product=ribonuclease R;protein_id=WP_012445121.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2194521 2194597 . + . ID=gene-IXO1104_RS10090;Name=IXO1104_RS10090;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10090;old_locus_tag=IXO1104_10040 NZ_CP047492.1 cmsearch ncRNA 2194521 2194597 . + . ID=rna-IXO1104_RS10090;Parent=gene-IXO1104_RS10090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10090;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2194521 2194597 . + . ID=exon-IXO1104_RS10090-1;Parent=rna-IXO1104_RS10090;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10090;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 2194777 2195152 . + . ID=gene-IXO1104_RS10095;Name=IXO1104_RS10095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10095;old_locus_tag=IXO1104_10045;pseudo=true NZ_CP047492.1 Protein Homology CDS 2194777 2195152 . + 0 ID=cds-IXO1104_RS10095;Parent=gene-IXO1104_RS10095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572181.1;locus_tag=IXO1104_RS10095;product=GFA family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2195485 2196252 . + . ID=gene-IXO1104_RS10100;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS10100;old_locus_tag=IXO1104_10050 NZ_CP047492.1 Protein Homology CDS 2195485 2196252 . + 0 ID=cds-WP_012445119.1;Parent=gene-IXO1104_RS10100;Dbxref=Genbank:WP_012445119.1;Name=WP_012445119.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445119.1;locus_tag=IXO1104_RS10100;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_012445119.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2196305 2197540 . - . ID=gene-IXO1104_RS10105;Name=IXO1104_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10105;old_locus_tag=IXO1104_10055 NZ_CP047492.1 Protein Homology CDS 2196305 2197540 . - 0 ID=cds-WP_044756360.1-3;Parent=gene-IXO1104_RS10105;Dbxref=Genbank:WP_044756360.1;Name=WP_044756360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS10105;product=ISL3 family transposase;protein_id=WP_044756360.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2197725 2198693 . + . ID=gene-IXO1104_RS10110;Name=IXO1104_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10110;old_locus_tag=IXO1104_10060 NZ_CP047492.1 Protein Homology CDS 2197725 2198693 . + 0 ID=cds-WP_012445118.1;Parent=gene-IXO1104_RS10110;Dbxref=Genbank:WP_012445118.1;Name=WP_012445118.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS10110;product=IS5 family transposase;protein_id=WP_012445118.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2198906 2199480 . - . ID=gene-IXO1104_RS10115;Name=IXO1104_RS10115;end_range=2199480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10115;old_locus_tag=IXO1104_10065;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2198906 2199480 . - 0 ID=cds-IXO1104_RS10115;Parent=gene-IXO1104_RS10115;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2199480,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10115;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2199524 2200169 . + . ID=gene-IXO1104_RS10120;Name=IXO1104_RS10120;end_range=2200169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10120;old_locus_tag=IXO1104_10070;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2199524 2200169 . + 0 ID=cds-IXO1104_RS10120;Parent=gene-IXO1104_RS10120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2200169,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS10120;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2200260 2200656 . + . ID=gene-IXO1104_RS10125;Name=IXO1104_RS10125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10125;old_locus_tag=IXO1104_10075;pseudo=true NZ_CP047492.1 Protein Homology CDS 2200260 2200656 . + 0 ID=cds-IXO1104_RS10125;Parent=gene-IXO1104_RS10125;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS10125;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2200658 2200810 . + . ID=gene-IXO1104_RS10130;Name=IXO1104_RS10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10130;old_locus_tag=IXO1104_10080;partial=true;pseudo=true;start_range=.,2200658 NZ_CP047492.1 Protein Homology CDS 2200658 2200810 . + 0 ID=cds-IXO1104_RS10130;Parent=gene-IXO1104_RS10130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS10130;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2200658;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2200865 2202339 . - . ID=gene-IXO1104_RS10135;Name=IXO1104_RS10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10135;old_locus_tag=IXO1104_10085;pseudo=true NZ_CP047492.1 Protein Homology CDS 2200865 2202339 . - 0 ID=cds-IXO1104_RS10135;Parent=gene-IXO1104_RS10135;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS10135;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2202668 2202844 . - . ID=gene-IXO1104_RS10140;Name=IXO1104_RS10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10140;old_locus_tag=IXO1104_10090;partial=true;pseudo=true;start_range=.,2202668 NZ_CP047492.1 Protein Homology CDS 2202668 2202844 . - 0 ID=cds-IXO1104_RS10140;Parent=gene-IXO1104_RS10140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090331.1;locus_tag=IXO1104_RS10140;partial=true;product=cold shock domain-containing protein;pseudo=true;start_range=.,2202668;transl_table=11 NZ_CP047492.1 RefSeq gene 2202993 2204192 . - . ID=gene-IXO1104_RS10145;Name=IXO1104_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10145;old_locus_tag=IXO1104_10095 NZ_CP047492.1 Protein Homology CDS 2202993 2204192 . - 0 ID=cds-WP_011258800.1;Parent=gene-IXO1104_RS10145;Dbxref=Genbank:WP_011258800.1;Name=WP_011258800.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503612.1;locus_tag=IXO1104_RS10145;product=homoserine O-acetyltransferase;protein_id=WP_011258800.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2204387 2205704 . + . ID=gene-IXO1104_RS10150;Name=IXO1104_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10150;old_locus_tag=IXO1104_10100;pseudo=true NZ_CP047492.1 Protein Homology CDS 2204387 2205704 . + 0 ID=cds-IXO1104_RS10150;Parent=gene-IXO1104_RS10150;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10150;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2206014 2207228 . + . ID=gene-IXO1104_RS10155;Name=IXO1104_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10155;old_locus_tag=IXO1104_10105 NZ_CP047492.1 Protein Homology CDS 2206014 2207228 . + 0 ID=cds-WP_133264696.1;Parent=gene-IXO1104_RS10155;Dbxref=Genbank:WP_133264696.1;Name=WP_133264696.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS10155;product=IS4 family transposase;protein_id=WP_133264696.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2207329 2207904 . - . ID=gene-IXO1104_RS10160;Name=IXO1104_RS10160;end_range=2207904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10160;old_locus_tag=IXO1104_10110;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2207329 2207904 . - 0 ID=cds-IXO1104_RS10160;Parent=gene-IXO1104_RS10160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2207904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10160;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2208032 2208997 . - . ID=gene-IXO1104_RS10165;Name=IXO1104_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10165;old_locus_tag=IXO1104_10115 NZ_CP047492.1 Protein Homology CDS 2208032 2208997 . - 0 ID=cds-WP_109181957.1;Parent=gene-IXO1104_RS10165;Dbxref=Genbank:WP_109181957.1;Name=WP_109181957.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS10165;product=IS1595 family transposase;protein_id=WP_109181957.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2209086 2209824 . + . ID=gene-IXO1104_RS10170;Name=IXO1104_RS10170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10170;old_locus_tag=IXO1104_10120;partial=true;pseudo=true;start_range=.,2209086 NZ_CP047492.1 Protein Homology CDS 2209086 2209824 . + 0 ID=cds-IXO1104_RS10170;Parent=gene-IXO1104_RS10170;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611838.1;locus_tag=IXO1104_RS10170;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2209086;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2209820 2210566 . - . ID=gene-IXO1104_RS10175;Name=IXO1104_RS10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10175;old_locus_tag=IXO1104_10125;partial=true;pseudo=true;start_range=.,2209820 NZ_CP047492.1 Protein Homology CDS 2209820 2210566 . - 0 ID=cds-IXO1104_RS10175;Parent=gene-IXO1104_RS10175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10175;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,2209820;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2210661 2210981 . + . ID=gene-IXO1104_RS10180;Name=IXO1104_RS10180;end_range=2210981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10180;old_locus_tag=IXO1104_10130;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2210661 2210981 . + 0 ID=cds-IXO1104_RS10180;Parent=gene-IXO1104_RS10180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2210981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1104_RS10180;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2211014 2212056 . - . ID=gene-IXO1104_RS10185;Name=IXO1104_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10185;old_locus_tag=IXO1104_10135 NZ_CP047492.1 Protein Homology CDS 2211861 2212056 . - 0 ID=cds-WP_263117933.1;Parent=gene-IXO1104_RS10185;Dbxref=Genbank:WP_263117933.1;Name=WP_263117933.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS10185;product=IS3 family transposase;protein_id=WP_263117933.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2211014 2211861 . - 2 ID=cds-WP_263117933.1;Parent=gene-IXO1104_RS10185;Dbxref=Genbank:WP_263117933.1;Name=WP_263117933.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS10185;product=IS3 family transposase;protein_id=WP_263117933.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2212303 2212770 . - . ID=gene-IXO1104_RS10190;Name=IXO1104_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10190;old_locus_tag=IXO1104_10140 NZ_CP047492.1 Protein Homology CDS 2212303 2212770 . - 0 ID=cds-WP_027704061.1;Parent=gene-IXO1104_RS10190;Dbxref=Genbank:WP_027704061.1;Name=WP_027704061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158182.1;locus_tag=IXO1104_RS10190;product=energy transducer TonB;protein_id=WP_027704061.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2213131 2213790 . - . ID=gene-IXO1104_RS10195;Name=IXO1104_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10195;old_locus_tag=IXO1104_10145 NZ_CP047492.1 Protein Homology CDS 2213131 2213790 . - 0 ID=cds-WP_012445101.1;Parent=gene-IXO1104_RS10195;Dbxref=Genbank:WP_012445101.1;Name=WP_012445101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089877.1;locus_tag=IXO1104_RS10195;product=energy transducer TonB;protein_id=WP_012445101.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2213902 2215251 . + . ID=gene-IXO1104_RS10200;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=IXO1104_RS10200;old_locus_tag=IXO1104_10150 NZ_CP047492.1 Protein Homology CDS 2213902 2215251 . + 0 ID=cds-WP_011258822.1;Parent=gene-IXO1104_RS10200;Dbxref=Genbank:WP_011258822.1;Name=WP_011258822.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991172.1;locus_tag=IXO1104_RS10200;product=serine--tRNA ligase;protein_id=WP_011258822.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2215311 2215385 . + . ID=gene-IXO1104_RS10205;Name=IXO1104_RS10205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10205;old_locus_tag=IXO1104_10155 NZ_CP047492.1 cmsearch ncRNA 2215311 2215385 . + . ID=rna-IXO1104_RS10205;Parent=gene-IXO1104_RS10205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10205;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2215311 2215385 . + . ID=exon-IXO1104_RS10205-1;Parent=rna-IXO1104_RS10205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10205;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2215401 2216199 . - . ID=gene-IXO1104_RS10210;Name=IXO1104_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10210;old_locus_tag=IXO1104_10160 NZ_CP047492.1 Protein Homology CDS 2215928 2216199 . - 0 ID=cds-WP_094187728.1-5;Parent=gene-IXO1104_RS10210;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS10210;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2215401 2215929 . - 1 ID=cds-WP_094187728.1-5;Parent=gene-IXO1104_RS10210;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS10210;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2216639 2217958 . + . ID=gene-IXO1104_RS10215;Name=IXO1104_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10215;old_locus_tag=IXO1104_10165 NZ_CP047492.1 Protein Homology CDS 2216639 2217958 . + 0 ID=cds-WP_133264694.1;Parent=gene-IXO1104_RS10215;Dbxref=Genbank:WP_133264694.1;Name=WP_133264694.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10215;product=IS701 family transposase;protein_id=WP_133264694.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2218171 2219139 . - . ID=gene-IXO1104_RS10220;Name=IXO1104_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10220;old_locus_tag=IXO1104_10170 NZ_CP047492.1 Protein Homology CDS 2218171 2219139 . - 0 ID=cds-WP_011258529.1-2;Parent=gene-IXO1104_RS10220;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS10220;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2219203 2219787 . - . ID=gene-IXO1104_RS10225;Name=IXO1104_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10225;old_locus_tag=IXO1104_10175 NZ_CP047492.1 Protein Homology CDS 2219203 2219787 . - 0 ID=cds-WP_011258824.1;Parent=gene-IXO1104_RS10225;Dbxref=Genbank:WP_011258824.1;Name=WP_011258824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158185.1;locus_tag=IXO1104_RS10225;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_011258824.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2219887 2220900 . + . ID=gene-IXO1104_RS10230;Name=IXO1104_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10230;old_locus_tag=IXO1104_10180 NZ_CP047492.1 Protein Homology CDS 2219887 2220900 . + 0 ID=cds-WP_011258825.1;Parent=gene-IXO1104_RS10230;Dbxref=Genbank:WP_011258825.1;Name=WP_011258825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964080.1;locus_tag=IXO1104_RS10230;product=LysR family transcriptional regulator;protein_id=WP_011258825.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2221277 2221366 . + . ID=gene-IXO1104_RS10235;Name=IXO1104_RS10235;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS10235;old_locus_tag=IXO1104_10185 NZ_CP047492.1 tRNAscan-SE tRNA 2221277 2221366 . + . ID=rna-IXO1104_RS10235;Parent=gene-IXO1104_RS10235;anticodon=(pos:2221311..2221313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS10235;product=tRNA-Ser NZ_CP047492.1 tRNAscan-SE exon 2221277 2221366 . + . ID=exon-IXO1104_RS10235-1;Parent=rna-IXO1104_RS10235;anticodon=(pos:2221311..2221313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS10235;product=tRNA-Ser NZ_CP047492.1 RefSeq gene 2221591 2221863 . - . ID=gene-IXO1104_RS10240;Name=IXO1104_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10240;old_locus_tag=IXO1104_10190 NZ_CP047492.1 GeneMarkS-2+ CDS 2221591 2221863 . - 0 ID=cds-WP_153296745.1;Parent=gene-IXO1104_RS10240;Dbxref=Genbank:WP_153296745.1;Name=WP_153296745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS10240;product=hypothetical protein;protein_id=WP_153296745.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2222101 2222253 . - . ID=gene-IXO1104_RS10245;Name=IXO1104_RS10245;end_range=2222253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10245;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2222101 2222253 . - 0 ID=cds-IXO1104_RS10245;Parent=gene-IXO1104_RS10245;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=2222253,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=IXO1104_RS10245;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2222270 2225788 . - . ID=gene-IXO1104_RS10250;Name=IXO1104_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10250;old_locus_tag=IXO1104_10195 NZ_CP047492.1 Protein Homology CDS 2222270 2225788 . - 0 ID=cds-WP_206737948.1;Parent=gene-IXO1104_RS10250;Dbxref=Genbank:WP_206737948.1;Name=WP_206737948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS10250;product=Avirulence protein AvrBs3;protein_id=WP_206737948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2226012 2226311 . - . ID=gene-IXO1104_RS10255;Name=IXO1104_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10255;old_locus_tag=IXO1104_10200 NZ_CP047492.1 Protein Homology CDS 2226012 2226311 . - 0 ID=cds-WP_044756872.1;Parent=gene-IXO1104_RS10255;Dbxref=Genbank:WP_044756872.1;Name=WP_044756872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS10255;product=hypothetical protein;protein_id=WP_044756872.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2226315 2226509 . - . ID=gene-IXO1104_RS10260;Name=IXO1104_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10260;old_locus_tag=IXO1104_10205 NZ_CP047492.1 GeneMarkS-2+ CDS 2226315 2226509 . - 0 ID=cds-WP_041182100.1-2;Parent=gene-IXO1104_RS10260;Dbxref=Genbank:WP_041182100.1;Name=WP_041182100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS10260;product=hypothetical protein;protein_id=WP_041182100.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2226778 2230296 . - . ID=gene-IXO1104_RS10265;Name=IXO1104_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10265;old_locus_tag=IXO1104_10210 NZ_CP047492.1 Protein Homology CDS 2226778 2230296 . - 0 ID=cds-WP_069959829.1;Parent=gene-IXO1104_RS10265;Dbxref=Genbank:WP_069959829.1;Name=WP_069959829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS10265;product=TAL effector repeat-containing protein;protein_id=WP_069959829.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2230631 2231782 . + . ID=gene-IXO1104_RS10270;Name=IXO1104_RS10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10270;old_locus_tag=IXO1104_10215;pseudo=true NZ_CP047492.1 Protein Homology CDS 2230631 2231782 . + 0 ID=cds-IXO1104_RS10270;Parent=gene-IXO1104_RS10270;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=IXO1104_RS10270;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2231932 2233423 . - . ID=gene-IXO1104_RS10275;Name=IXO1104_RS10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10275;old_locus_tag=IXO1104_10220;pseudo=true NZ_CP047492.1 Protein Homology CDS 2231932 2233423 . - 0 ID=cds-IXO1104_RS10275;Parent=gene-IXO1104_RS10275;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS10275;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2233564 2236877 . - . ID=gene-IXO1104_RS10280;Name=IXO1104_RS10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10280;old_locus_tag=IXO1104_10225;pseudo=true NZ_CP047492.1 Protein Homology CDS 2233564 2236877 . - 0 ID=cds-IXO1104_RS10280;Parent=gene-IXO1104_RS10280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS10280;product=avirulence protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2237166 2238484 . - . ID=gene-IXO1104_RS10285;Name=IXO1104_RS10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10285;old_locus_tag=IXO1104_10230;pseudo=true NZ_CP047492.1 Protein Homology CDS 2237166 2238484 . - 0 ID=cds-IXO1104_RS10285;Parent=gene-IXO1104_RS10285;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10285;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2238582 2239639 . + . ID=gene-IXO1104_RS10290;Name=IXO1104_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10290;old_locus_tag=IXO1104_10235 NZ_CP047492.1 Protein Homology CDS 2238582 2239158 . + 0 ID=cds-WP_206737950.1;Parent=gene-IXO1104_RS10290;Dbxref=Genbank:WP_206737950.1;Name=WP_206737950.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1104_RS10290;product=IS630 family transposase;protein_id=WP_206737950.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2239158 2239639 . + 2 ID=cds-WP_206737950.1;Parent=gene-IXO1104_RS10290;Dbxref=Genbank:WP_206737950.1;Name=WP_206737950.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1104_RS10290;product=IS630 family transposase;protein_id=WP_206737950.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2239727 2241631 . - . ID=gene-IXO1104_RS10295;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=IXO1104_RS10295;old_locus_tag=IXO1104_10240 NZ_CP047492.1 Protein Homology CDS 2239727 2241631 . - 0 ID=cds-WP_011408651.1;Parent=gene-IXO1104_RS10295;Dbxref=Genbank:WP_011408651.1;Name=WP_011408651.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303855.1;locus_tag=IXO1104_RS10295;product=molecular chaperone HtpG;protein_id=WP_011408651.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2241806 2242492 . + . ID=gene-IXO1104_RS10300;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=IXO1104_RS10300;old_locus_tag=IXO1104_10245 NZ_CP047492.1 Protein Homology CDS 2241806 2242492 . + 0 ID=cds-WP_171970813.1;Parent=gene-IXO1104_RS10300;Dbxref=Genbank:WP_171970813.1;Name=WP_171970813.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157278.1;locus_tag=IXO1104_RS10300;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_171970813.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2242489 2242995 . + . ID=gene-IXO1104_RS10305;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS10305;old_locus_tag=IXO1104_10250 NZ_CP047492.1 Protein Homology CDS 2242489 2242995 . + 0 ID=cds-WP_011259147.1;Parent=gene-IXO1104_RS10305;Dbxref=Genbank:WP_011259147.1;Name=WP_011259147.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372369.1;locus_tag=IXO1104_RS10305;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_011259147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2243042 2243539 . + . ID=gene-IXO1104_RS10310;Name=IXO1104_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10310;old_locus_tag=IXO1104_10255 NZ_CP047492.1 Protein Homology CDS 2243042 2243539 . + 0 ID=cds-WP_024743916.1;Parent=gene-IXO1104_RS10310;Dbxref=Genbank:WP_024743916.1;Name=WP_024743916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157277.1;locus_tag=IXO1104_RS10310;product=hypothetical protein;protein_id=WP_024743916.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2243598 2243780 . + . ID=gene-IXO1104_RS10315;Name=IXO1104_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10315;old_locus_tag=IXO1104_10260 NZ_CP047492.1 Protein Homology CDS 2243598 2243780 . + 0 ID=cds-WP_075240711.1;Parent=gene-IXO1104_RS10315;Dbxref=Genbank:WP_075240711.1;Name=WP_075240711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920364.1;locus_tag=IXO1104_RS10315;product=hypothetical protein;protein_id=WP_075240711.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2243771 2244055 . + . ID=gene-IXO1104_RS10320;Name=IXO1104_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10320;old_locus_tag=IXO1104_10265 NZ_CP047492.1 Protein Homology CDS 2243771 2244055 . + 0 ID=cds-WP_014502923.1;Parent=gene-IXO1104_RS10320;Dbxref=Genbank:WP_014502923.1;Name=WP_014502923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502923.1;locus_tag=IXO1104_RS10320;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_014502923.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2244052 2245845 . + . ID=gene-IXO1104_RS10325;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=IXO1104_RS10325;old_locus_tag=IXO1104_10270 NZ_CP047492.1 Protein Homology CDS 2244052 2245845 . + 0 ID=cds-WP_075240710.1;Parent=gene-IXO1104_RS10325;Dbxref=Genbank:WP_075240710.1;Name=WP_075240710.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408648.1;locus_tag=IXO1104_RS10325;product=gamma-glutamyltransferase;protein_id=WP_075240710.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2245852 2246883 . - . ID=gene-IXO1104_RS10330;Name=IXO1104_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10330;old_locus_tag=IXO1104_10275 NZ_CP047492.1 Protein Homology CDS 2245852 2246883 . - 0 ID=cds-WP_164994125.1;Parent=gene-IXO1104_RS10330;Dbxref=Genbank:WP_164994125.1;Name=WP_164994125.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1104_RS10330;product=IS630 family transposase;protein_id=WP_164994125.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2247163 2247926 . - . ID=gene-IXO1104_RS10335;Name=IXO1104_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10335;old_locus_tag=IXO1104_10280 NZ_CP047492.1 Protein Homology CDS 2247611 2247926 . - 0 ID=cds-WP_094187715.1-8;Parent=gene-IXO1104_RS10335;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS10335;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2247163 2247611 . - 2 ID=cds-WP_094187715.1-8;Parent=gene-IXO1104_RS10335;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS10335;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2248230 2248305 . + . ID=gene-IXO1104_RS10340;Name=IXO1104_RS10340;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10340;old_locus_tag=IXO1104_10285 NZ_CP047492.1 cmsearch ncRNA 2248230 2248305 . + . ID=rna-IXO1104_RS10340;Parent=gene-IXO1104_RS10340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10340;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2248230 2248305 . + . ID=exon-IXO1104_RS10340-1;Parent=rna-IXO1104_RS10340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10340;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2248323 2248955 . - . ID=gene-IXO1104_RS10345;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=IXO1104_RS10345;old_locus_tag=IXO1104_10290 NZ_CP047492.1 Protein Homology CDS 2248323 2248955 . - 0 ID=cds-WP_011259142.1;Parent=gene-IXO1104_RS10345;Dbxref=Genbank:WP_011259142.1;Name=WP_011259142.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116260.1;locus_tag=IXO1104_RS10345;product=uracil phosphoribosyltransferase;protein_id=WP_011259142.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2249106 2249456 . + . ID=gene-IXO1104_RS10350;Name=IXO1104_RS10350;end_range=2249456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10350;old_locus_tag=IXO1104_10295;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2249106 2249456 . + 0 ID=cds-IXO1104_RS10350;Parent=gene-IXO1104_RS10350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2249456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502926.1;locus_tag=IXO1104_RS10350;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2249618 2251843 . + . ID=gene-IXO1104_RS10355;Name=IXO1104_RS10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10355;old_locus_tag=IXO1104_10300;partial=true;pseudo=true;start_range=.,2249618 NZ_CP047492.1 Protein Homology CDS 2249618 2251843 . + 0 ID=cds-IXO1104_RS10355;Parent=gene-IXO1104_RS10355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502926.1;locus_tag=IXO1104_RS10355;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,2249618;transl_table=11 NZ_CP047492.1 RefSeq gene 2251840 2252961 . + . ID=gene-IXO1104_RS10360;Name=IXO1104_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10360;old_locus_tag=IXO1104_10305 NZ_CP047492.1 Protein Homology CDS 2251840 2252961 . + 0 ID=cds-WP_011259140.1;Parent=gene-IXO1104_RS10360;Dbxref=Genbank:WP_011259140.1;Name=WP_011259140.1;Ontology_term=GO:0016158;gbkey=CDS;go_function=3-phytase activity|0016158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851231.1;locus_tag=IXO1104_RS10360;product=phytase;protein_id=WP_011259140.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2252958 2253607 . + . ID=gene-IXO1104_RS10365;Name=IXO1104_RS10365;end_range=2253607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10365;old_locus_tag=IXO1104_10310;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2252958 2253607 . + 0 ID=cds-IXO1104_RS10365;Parent=gene-IXO1104_RS10365;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2253607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=IXO1104_RS10365;partial=true;product=fibronectin type III domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2253627 2254187 . - . ID=gene-IXO1104_RS10370;Name=IXO1104_RS10370;end_range=2254187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10370;old_locus_tag=IXO1104_10315;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2253627 2254187 . - 0 ID=cds-IXO1104_RS10370;Parent=gene-IXO1104_RS10370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2254187,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1104_RS10370;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2254410 2255366 . - . ID=gene-IXO1104_RS10375;Name=IXO1104_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10375;old_locus_tag=IXO1104_10320 NZ_CP047492.1 Protein Homology CDS 2254410 2255366 . - 0 ID=cds-WP_041182545.1-5;Parent=gene-IXO1104_RS10375;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS10375;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2255460 2256653 . - . ID=gene-IXO1104_RS10380;Name=IXO1104_RS10380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10380;old_locus_tag=IXO1104_10325;partial=true;pseudo=true;start_range=.,2255460 NZ_CP047492.1 Protein Homology CDS 2255460 2256653 . - 0 ID=cds-IXO1104_RS10380;Parent=gene-IXO1104_RS10380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10380;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,2255460;transl_table=11 NZ_CP047492.1 RefSeq gene 2256881 2257195 . - . ID=gene-IXO1104_RS10385;Name=IXO1104_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10385;old_locus_tag=IXO1104_10330 NZ_CP047492.1 Protein Homology CDS 2256881 2257195 . - 0 ID=cds-WP_011408814.1;Parent=gene-IXO1104_RS10385;Dbxref=Genbank:WP_011408814.1;Name=WP_011408814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403016.1;locus_tag=IXO1104_RS10385;product=DUF1153 domain-containing protein;protein_id=WP_011408814.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2257251 2258081 . - . ID=gene-IXO1104_RS10390;Name=IXO1104_RS10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10390;old_locus_tag=IXO1104_10335;partial=true;pseudo=true;start_range=.,2257251 NZ_CP047492.1 Protein Homology CDS 2257251 2258081 . - 0 ID=cds-IXO1104_RS10390;Parent=gene-IXO1104_RS10390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012701750.1;locus_tag=IXO1104_RS10390;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,2257251;transl_table=11 NZ_CP047492.1 RefSeq gene 2258350 2258631 . + . ID=gene-IXO1104_RS10395;Name=IXO1104_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10395;old_locus_tag=IXO1104_10340 NZ_CP047492.1 Protein Homology CDS 2258350 2258631 . + 0 ID=cds-WP_256724398.1;Parent=gene-IXO1104_RS10395;Dbxref=Genbank:WP_256724398.1;Name=WP_256724398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444628.1;locus_tag=IXO1104_RS10395;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_256724398.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2258671 2261970 . + . ID=gene-IXO1104_RS10400;Name=IXO1104_RS10400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10400;old_locus_tag=IXO1104_10345;pseudo=true NZ_CP047492.1 Protein Homology CDS 2258671 2261970 . + 0 ID=cds-IXO1104_RS10400;Parent=gene-IXO1104_RS10400;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505114.1;locus_tag=IXO1104_RS10400;product=TAL effector repeat-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2262027 2262146 . - . ID=gene-IXO1104_RS10405;Name=IXO1104_RS10405;end_range=2262146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10405;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2262027 2262146 . - 0 ID=cds-IXO1104_RS10405;Parent=gene-IXO1104_RS10405;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2262146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=IXO1104_RS10405;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2262169 2263262 . - . ID=gene-IXO1104_RS10410;Name=IXO1104_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10410;old_locus_tag=IXO1104_10350 NZ_CP047492.1 Protein Homology CDS 2263076 2263262 . - 0 ID=cds-WP_256723596.1;Parent=gene-IXO1104_RS10410;Dbxref=Genbank:WP_256723596.1;Name=WP_256723596.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS10410;product=IS3 family transposase;protein_id=WP_256723596.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2262169 2263076 . - 2 ID=cds-WP_256723596.1;Parent=gene-IXO1104_RS10410;Dbxref=Genbank:WP_256723596.1;Name=WP_256723596.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS10410;product=IS3 family transposase;protein_id=WP_256723596.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2263516 2266278 . + . ID=gene-IXO1104_RS10415;Name=IXO1104_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10415;old_locus_tag=IXO1104_10355 NZ_CP047492.1 Protein Homology CDS 2263516 2266278 . + 0 ID=cds-WP_263117919.1;Parent=gene-IXO1104_RS10415;Dbxref=Genbank:WP_263117919.1;Name=WP_263117919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444636.1;locus_tag=IXO1104_RS10415;product=type VI secretion system tip protein VgrG;protein_id=WP_263117919.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2266287 2267216 . + . ID=gene-IXO1104_RS10420;Name=IXO1104_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10420;old_locus_tag=IXO1104_10360 NZ_CP047492.1 Protein Homology CDS 2266287 2267216 . + 0 ID=cds-WP_012444637.1;Parent=gene-IXO1104_RS10420;Dbxref=Genbank:WP_012444637.1;Name=WP_012444637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1104_RS10420;product=DUF4123 domain-containing protein;protein_id=WP_012444637.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2267213 2269555 . + . ID=gene-IXO1104_RS10425;Name=IXO1104_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10425;old_locus_tag=IXO1104_10365 NZ_CP047492.1 Protein Homology CDS 2267213 2269555 . + 0 ID=cds-WP_241846845.1;Parent=gene-IXO1104_RS10425;Dbxref=Genbank:WP_241846845.1;Name=WP_241846845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259612.1;locus_tag=IXO1104_RS10425;product=hypothetical protein;protein_id=WP_241846845.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2269546 2270502 . - . ID=gene-IXO1104_RS10430;Name=IXO1104_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10430;old_locus_tag=IXO1104_10370 NZ_CP047492.1 Protein Homology CDS 2269546 2270502 . - 0 ID=cds-WP_011407237.1-6;Parent=gene-IXO1104_RS10430;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS10430;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2270786 2272105 . + . ID=gene-IXO1104_RS10435;Name=IXO1104_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10435;old_locus_tag=IXO1104_10375 NZ_CP047492.1 Protein Homology CDS 2270786 2272105 . + 0 ID=cds-WP_109182069.1-3;Parent=gene-IXO1104_RS10435;Dbxref=Genbank:WP_109182069.1;Name=WP_109182069.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10435;product=IS701 family transposase;protein_id=WP_109182069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2272318 2273286 . - . ID=gene-IXO1104_RS10440;Name=IXO1104_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10440;old_locus_tag=IXO1104_10380 NZ_CP047492.1 Protein Homology CDS 2272318 2273286 . - 0 ID=cds-WP_011258529.1-3;Parent=gene-IXO1104_RS10440;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS10440;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2273352 2274164 . - . ID=gene-IXO1104_RS10445;Name=IXO1104_RS10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10445;old_locus_tag=IXO1104_10385;partial=true;pseudo=true;start_range=.,2273352 NZ_CP047492.1 Protein Homology CDS 2273352 2274164 . - 0 ID=cds-IXO1104_RS10445;Parent=gene-IXO1104_RS10445;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS10445;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2273352;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2274281 2275063 . + . ID=gene-IXO1104_RS10450;Name=IXO1104_RS10450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10450;old_locus_tag=IXO1104_10390;partial=true;pseudo=true;start_range=.,2274281 NZ_CP047492.1 Protein Homology CDS 2274281 2275063 . + 0 ID=cds-IXO1104_RS10450;Parent=gene-IXO1104_RS10450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=IXO1104_RS10450;partial=true;product=metallophosphoesterase;pseudo=true;start_range=.,2274281;transl_table=11 NZ_CP047492.1 RefSeq gene 2275454 2276161 . + . ID=gene-IXO1104_RS10455;Name=IXO1104_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10455;old_locus_tag=IXO1104_10395 NZ_CP047492.1 Protein Homology CDS 2275454 2276161 . + 0 ID=cds-WP_011259129.1;Parent=gene-IXO1104_RS10455;Dbxref=Genbank:WP_011259129.1;Name=WP_011259129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157269.1;locus_tag=IXO1104_RS10455;product=glycosyltransferase;protein_id=WP_011259129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2276232 2276546 . + . ID=gene-IXO1104_RS10460;Name=IXO1104_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10460;old_locus_tag=IXO1104_10400 NZ_CP047492.1 Protein Homology CDS 2276232 2276546 . + 0 ID=cds-WP_011408639.1;Parent=gene-IXO1104_RS10460;Dbxref=Genbank:WP_011408639.1;Name=WP_011408639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408639.1;locus_tag=IXO1104_RS10460;product=hypothetical protein;protein_id=WP_011408639.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2276506 2278002 . - . ID=gene-IXO1104_RS10465;Name=IXO1104_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10465;old_locus_tag=IXO1104_10405 NZ_CP047492.1 Protein Homology CDS 2276506 2278002 . - 0 ID=cds-WP_011259128.1;Parent=gene-IXO1104_RS10465;Dbxref=Genbank:WP_011259128.1;Name=WP_011259128.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438074.1;locus_tag=IXO1104_RS10465;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_011259128.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2278126 2278557 . + . ID=gene-IXO1104_RS10470;Name=IXO1104_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10470;old_locus_tag=IXO1104_10410 NZ_CP047492.1 Protein Homology CDS 2278126 2278557 . + 0 ID=cds-WP_011259127.1;Parent=gene-IXO1104_RS10470;Dbxref=Genbank:WP_011259127.1;Name=WP_011259127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489775.1;locus_tag=IXO1104_RS10470;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011259127.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2278737 2279807 . + . ID=gene-IXO1104_RS10475;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10475;old_locus_tag=IXO1104_10415 NZ_CP047492.1 Protein Homology CDS 2278737 2279807 . + 0 ID=cds-WP_027703908.1;Parent=gene-IXO1104_RS10475;Dbxref=Genbank:WP_027703908.1;Name=WP_027703908.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037521.1;locus_tag=IXO1104_RS10475;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_027703908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2279877 2281022 . + . ID=gene-IXO1104_RS10480;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=IXO1104_RS10480;old_locus_tag=IXO1104_10420 NZ_CP047492.1 Protein Homology CDS 2279877 2281022 . + 0 ID=cds-WP_011259125.1;Parent=gene-IXO1104_RS10480;Dbxref=Genbank:WP_011259125.1;Name=WP_011259125.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157264.1;locus_tag=IXO1104_RS10480;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_011259125.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2281154 2281507 . + . ID=gene-IXO1104_RS10485;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=IXO1104_RS10485;old_locus_tag=IXO1104_10425 NZ_CP047492.1 Protein Homology CDS 2281154 2281507 . + 0 ID=cds-WP_011259124.1;Parent=gene-IXO1104_RS10485;Dbxref=Genbank:WP_011259124.1;Name=WP_011259124.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157263.1;locus_tag=IXO1104_RS10485;product=preprotein translocase subunit YajC;protein_id=WP_011259124.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2281704 2283548 . + . ID=gene-IXO1104_RS10490;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=IXO1104_RS10490;old_locus_tag=IXO1104_10430 NZ_CP047492.1 Protein Homology CDS 2281704 2283548 . + 0 ID=cds-WP_012444775.1;Parent=gene-IXO1104_RS10490;Dbxref=Genbank:WP_012444775.1;Name=WP_012444775.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=IXO1104_RS10490;product=protein translocase subunit SecD;protein_id=WP_012444775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2283643 2284611 . + . ID=gene-IXO1104_RS10495;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=IXO1104_RS10495;old_locus_tag=IXO1104_10435 NZ_CP047492.1 Protein Homology CDS 2283643 2284611 . + 0 ID=cds-WP_011259122.1;Parent=gene-IXO1104_RS10495;Dbxref=Genbank:WP_011259122.1;Name=WP_011259122.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438079.1;locus_tag=IXO1104_RS10495;product=protein translocase subunit SecF;protein_id=WP_011259122.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2284692 2285054 . - . ID=gene-IXO1104_RS10500;Name=IXO1104_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10500;old_locus_tag=IXO1104_10440 NZ_CP047492.1 Protein Homology CDS 2284692 2285054 . - 0 ID=cds-WP_011408636.1;Parent=gene-IXO1104_RS10500;Dbxref=Genbank:WP_011408636.1;Name=WP_011408636.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408636.1;locus_tag=IXO1104_RS10500;product=phage integrase N-terminal SAM-like domain-containing protein;protein_id=WP_011408636.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2285322 2286245 . + . ID=gene-IXO1104_RS10505;Name=IXO1104_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10505;old_locus_tag=IXO1104_10445 NZ_CP047492.1 Protein Homology CDS 2285322 2286245 . + 0 ID=cds-WP_012444776.1;Parent=gene-IXO1104_RS10505;Dbxref=Genbank:WP_012444776.1;Name=WP_012444776.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270155.1;locus_tag=IXO1104_RS10505;product=IS5 family transposase;protein_id=WP_012444776.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2286494 2287460 . + . ID=gene-IXO1104_RS10510;Name=IXO1104_RS10510;end_range=2287460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10510;old_locus_tag=IXO1104_10450;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2286494 2287460 . + 0 ID=cds-IXO1104_RS10510;Parent=gene-IXO1104_RS10510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2287460,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_029310391.1;locus_tag=IXO1104_RS10510;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2287460 2287642 . + . ID=gene-IXO1104_RS10515;Name=IXO1104_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10515;old_locus_tag=IXO1104_10455;partial=true;pseudo=true;start_range=.,2287460 NZ_CP047492.1 Protein Homology CDS 2287460 2287642 . + 0 ID=cds-IXO1104_RS10515;Parent=gene-IXO1104_RS10515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS10515;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,2287460;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2287743 2289061 . - . ID=gene-IXO1104_RS10520;Name=IXO1104_RS10520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10520;old_locus_tag=IXO1104_10460;pseudo=true NZ_CP047492.1 Protein Homology CDS 2287743 2289061 . - 0 ID=cds-IXO1104_RS10520;Parent=gene-IXO1104_RS10520;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10520;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2289311 2290495 . - . ID=gene-IXO1104_RS10525;Name=IXO1104_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10525;old_locus_tag=IXO1104_10465 NZ_CP047492.1 Protein Homology CDS 2289311 2290495 . - 0 ID=cds-WP_011407609.1;Parent=gene-IXO1104_RS10525;Dbxref=Genbank:WP_011407609.1;Name=WP_011407609.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS10525;product=IS256 family transposase;protein_id=WP_011407609.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2290546 2291696 . + . ID=gene-IXO1104_RS10530;Name=IXO1104_RS10530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10530;old_locus_tag=IXO1104_10470;pseudo=true NZ_CP047492.1 Protein Homology CDS 2290546 2291696 . + 0 ID=cds-IXO1104_RS10530;Parent=gene-IXO1104_RS10530;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1104_RS10530;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2291844 2293163 . - . ID=gene-IXO1104_RS10535;Name=IXO1104_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10535;old_locus_tag=IXO1104_10475 NZ_CP047492.1 Protein Homology CDS 2291844 2293163 . - 0 ID=cds-WP_109181923.1;Parent=gene-IXO1104_RS10535;Dbxref=Genbank:WP_109181923.1;Name=WP_109181923.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS10535;product=IS701 family transposase;protein_id=WP_109181923.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2293234 2293869 . - . ID=gene-IXO1104_RS10540;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=IXO1104_RS10540;old_locus_tag=IXO1104_10480 NZ_CP047492.1 Protein Homology CDS 2293234 2293869 . - 0 ID=cds-WP_011259117.1;Parent=gene-IXO1104_RS10540;Dbxref=Genbank:WP_011259117.1;Name=WP_011259117.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259117.1;locus_tag=IXO1104_RS10540;product=ribonuclease T;protein_id=WP_011259117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2294153 2294548 . - . ID=gene-IXO1104_RS10545;Name=IXO1104_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10545;old_locus_tag=IXO1104_10485 NZ_CP047492.1 Protein Homology CDS 2294153 2294548 . - 0 ID=cds-WP_012444782.1;Parent=gene-IXO1104_RS10545;Dbxref=Genbank:WP_012444782.1;Name=WP_012444782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160317.1;locus_tag=IXO1104_RS10545;product=RcnB family protein;protein_id=WP_012444782.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2294681 2295391 . - . ID=gene-IXO1104_RS10550;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=IXO1104_RS10550;old_locus_tag=IXO1104_10490 NZ_CP047492.1 Protein Homology CDS 2294681 2295391 . - 0 ID=cds-WP_011408630.1;Parent=gene-IXO1104_RS10550;Dbxref=Genbank:WP_011408630.1;Name=WP_011408630.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994733.1;locus_tag=IXO1104_RS10550;product=phosphate signaling complex protein PhoU;protein_id=WP_011408630.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2295520 2296350 . - . ID=gene-IXO1104_RS10555;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=IXO1104_RS10555;old_locus_tag=IXO1104_10495 NZ_CP047492.1 Protein Homology CDS 2295520 2296350 . - 0 ID=cds-WP_011259114.1;Parent=gene-IXO1104_RS10555;Dbxref=Genbank:WP_011259114.1;Name=WP_011259114.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237787.1;locus_tag=IXO1104_RS10555;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_011259114.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2296373 2297242 . - . ID=gene-IXO1104_RS10560;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10560;old_locus_tag=IXO1104_10500 NZ_CP047492.1 Protein Homology CDS 2296373 2297242 . - 0 ID=cds-WP_011259113.1;Parent=gene-IXO1104_RS10560;Dbxref=Genbank:WP_011259113.1;Name=WP_011259113.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155848.1;locus_tag=IXO1104_RS10560;product=phosphate ABC transporter permease PstA;protein_id=WP_011259113.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2297242 2298216 . - . ID=gene-IXO1104_RS10565;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=IXO1104_RS10565;old_locus_tag=IXO1104_10505 NZ_CP047492.1 Protein Homology CDS 2297242 2298216 . - 0 ID=cds-WP_011259112.1;Parent=gene-IXO1104_RS10565;Dbxref=Genbank:WP_011259112.1;Name=WP_011259112.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572163.1;locus_tag=IXO1104_RS10565;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_011259112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2298329 2299420 . - . ID=gene-IXO1104_RS10570;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=IXO1104_RS10570;old_locus_tag=IXO1104_10510 NZ_CP047492.1 Protein Homology CDS 2298329 2299420 . - 0 ID=cds-WP_012444785.1;Parent=gene-IXO1104_RS10570;Dbxref=Genbank:WP_012444785.1;Name=WP_012444785.1;Ontology_term=GO:0015415,GO:0042301,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=pstS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966222.1;locus_tag=IXO1104_RS10570;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_012444785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2299606 2300625 . - . ID=gene-IXO1104_RS10575;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=IXO1104_RS10575;old_locus_tag=IXO1104_10515 NZ_CP047492.1 Protein Homology CDS 2299606 2300625 . - 0 ID=cds-WP_012444786.1;Parent=gene-IXO1104_RS10575;Dbxref=Genbank:WP_012444786.1;Name=WP_012444786.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408625.1;locus_tag=IXO1104_RS10575;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_012444786.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2300814 2302064 . - . ID=gene-IXO1104_RS10580;Name=IXO1104_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10580;old_locus_tag=IXO1104_10520 NZ_CP047492.1 Protein Homology CDS 2300814 2302064 . - 0 ID=cds-WP_012444787.1;Parent=gene-IXO1104_RS10580;Dbxref=Genbank:WP_012444787.1;Name=WP_012444787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036714.1;locus_tag=IXO1104_RS10580;product=OprO/OprP family phosphate-selective porin;protein_id=WP_012444787.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2302404 2302724 . + . ID=gene-IXO1104_RS10585;Name=IXO1104_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10585;old_locus_tag=IXO1104_10525;pseudo=true NZ_CP047492.1 Protein Homology CDS 2302404 2302724 . + 0 ID=cds-IXO1104_RS10585;Parent=gene-IXO1104_RS10585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155852.1;locus_tag=IXO1104_RS10585;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2302898 2303661 . + . ID=gene-IXO1104_RS10590;Name=IXO1104_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10590;old_locus_tag=IXO1104_10530 NZ_CP047492.1 Protein Homology CDS 2302898 2303213 . + 0 ID=cds-WP_094187715.1-9;Parent=gene-IXO1104_RS10590;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS10590;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2303213 2303661 . + 2 ID=cds-WP_094187715.1-9;Parent=gene-IXO1104_RS10590;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS10590;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2303674 2304336 . + . ID=gene-IXO1104_RS10595;Name=IXO1104_RS10595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10595;old_locus_tag=IXO1104_10535;partial=true;pseudo=true;start_range=.,2303674 NZ_CP047492.1 Protein Homology CDS 2303674 2304336 . + 0 ID=cds-IXO1104_RS10595;Parent=gene-IXO1104_RS10595;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366497.1;locus_tag=IXO1104_RS10595;partial=true;product=carbonic anhydrase;pseudo=true;start_range=.,2303674;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2304400 2304954 . + . ID=gene-IXO1104_RS10600;Name=IXO1104_RS10600;end_range=2304954,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10600;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2304400 2304954 . + 0 ID=cds-IXO1104_RS10600;Parent=gene-IXO1104_RS10600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008272,GO:0015116,GO:0016021;end_range=2304954,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: protein motif:HMM:NF013109.2;locus_tag=IXO1104_RS10600;partial=true;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2305208 2305291 . + . ID=gene-IXO1104_RS10605;Name=IXO1104_RS10605;end_range=2305291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10605;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2305208 2305291 . + 0 ID=cds-IXO1104_RS10605;Parent=gene-IXO1104_RS10605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2305291,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024857.2;locus_tag=IXO1104_RS10605;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2305647 2306357 . - . ID=gene-IXO1104_RS10610;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=IXO1104_RS10610;old_locus_tag=IXO1104_10545 NZ_CP047492.1 Protein Homology CDS 2305647 2306357 . - 0 ID=cds-WP_075240422.1;Parent=gene-IXO1104_RS10610;Dbxref=Genbank:WP_075240422.1;Name=WP_075240422.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502811.1;locus_tag=IXO1104_RS10610;product=endonuclease III;protein_id=WP_075240422.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2306354 2306734 . - . ID=gene-IXO1104_RS10615;Name=IXO1104_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10615;old_locus_tag=IXO1104_10550 NZ_CP047492.1 Protein Homology CDS 2306354 2306734 . - 0 ID=cds-WP_011408619.1;Parent=gene-IXO1104_RS10615;Dbxref=Genbank:WP_011408619.1;Name=WP_011408619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502812.1;locus_tag=IXO1104_RS10615;product=hypothetical protein;protein_id=WP_011408619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2306743 2307525 . - . ID=gene-IXO1104_RS10620;Name=IXO1104_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10620;old_locus_tag=IXO1104_10555 NZ_CP047492.1 Protein Homology CDS 2306743 2307525 . - 0 ID=cds-WP_075240421.1;Parent=gene-IXO1104_RS10620;Dbxref=Genbank:WP_075240421.1;Name=WP_075240421.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966234.1;locus_tag=IXO1104_RS10620;product=enoyl-CoA hydratase-related protein;protein_id=WP_075240421.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2307689 2308387 . + . ID=gene-IXO1104_RS10625;Name=IXO1104_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10625;old_locus_tag=IXO1104_10560 NZ_CP047492.1 Protein Homology CDS 2307689 2308387 . + 0 ID=cds-WP_011408617.1;Parent=gene-IXO1104_RS10625;Dbxref=Genbank:WP_011408617.1;Name=WP_011408617.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804447.1;locus_tag=IXO1104_RS10625;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011408617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2308380 2308619 . - . ID=gene-IXO1104_RS10630;Name=IXO1104_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10630 NZ_CP047492.1 GeneMarkS-2+ CDS 2308380 2308619 . - 0 ID=cds-WP_162828804.1;Parent=gene-IXO1104_RS10630;Dbxref=Genbank:WP_162828804.1;Name=WP_162828804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS10630;product=hypothetical protein;protein_id=WP_162828804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2308500 2309339 . + . ID=gene-IXO1104_RS10635;Name=IXO1104_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10635;old_locus_tag=IXO1104_10565 NZ_CP047492.1 Protein Homology CDS 2308500 2309339 . + 0 ID=cds-WP_027703371.1;Parent=gene-IXO1104_RS10635;Dbxref=Genbank:WP_027703371.1;Name=WP_027703371.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155858.1;locus_tag=IXO1104_RS10635;product=CoA pyrophosphatase;protein_id=WP_027703371.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2309336 2310208 . + . ID=gene-IXO1104_RS10640;Name=IXO1104_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10640;old_locus_tag=IXO1104_10570 NZ_CP047492.1 Protein Homology CDS 2309336 2310208 . + 0 ID=cds-WP_012444794.1;Parent=gene-IXO1104_RS10640;Dbxref=Genbank:WP_012444794.1;Name=WP_012444794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926214.1;locus_tag=IXO1104_RS10640;product=sulfurtransferase;protein_id=WP_012444794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2310297 2311250 . + . ID=gene-IXO1104_RS10645;Name=IXO1104_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10645;old_locus_tag=IXO1104_10575 NZ_CP047492.1 Protein Homology CDS 2310297 2311250 . + 0 ID=cds-WP_011259101.1;Parent=gene-IXO1104_RS10645;Dbxref=Genbank:WP_011259101.1;Name=WP_011259101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429239.1;locus_tag=IXO1104_RS10645;product=DUF1684 domain-containing protein;protein_id=WP_011259101.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2311327 2311902 . - . ID=gene-IXO1104_RS10650;Name=IXO1104_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10650;old_locus_tag=IXO1104_10580 NZ_CP047492.1 Protein Homology CDS 2311327 2311902 . - 0 ID=cds-WP_012444795.1;Parent=gene-IXO1104_RS10650;Dbxref=Genbank:WP_012444795.1;Name=WP_012444795.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302791.1;locus_tag=IXO1104_RS10650;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_012444795.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2311926 2312417 . + . ID=gene-IXO1104_RS10655;Name=IXO1104_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10655;old_locus_tag=IXO1104_10585 NZ_CP047492.1 Protein Homology CDS 2311926 2312417 . + 0 ID=cds-WP_011408612.1;Parent=gene-IXO1104_RS10655;Dbxref=Genbank:WP_011408612.1;Name=WP_011408612.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089837.1;locus_tag=IXO1104_RS10655;product=MOSC domain-containing protein;protein_id=WP_011408612.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2312414 2312941 . + . ID=gene-IXO1104_RS10660;Name=IXO1104_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10660;old_locus_tag=IXO1104_10590 NZ_CP047492.1 Protein Homology CDS 2312414 2312941 . + 0 ID=cds-WP_011259099.1;Parent=gene-IXO1104_RS10660;Dbxref=Genbank:WP_011259099.1;Name=WP_011259099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966252.1;locus_tag=IXO1104_RS10660;product=alpha/beta hydrolase;protein_id=WP_011259099.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2312982 2313488 . + . ID=gene-IXO1104_RS10665;Name=IXO1104_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10665;old_locus_tag=IXO1104_10595 NZ_CP047492.1 Protein Homology CDS 2312982 2313488 . + 0 ID=cds-WP_011259098.1;Parent=gene-IXO1104_RS10665;Dbxref=Genbank:WP_011259098.1;Name=WP_011259098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429248.1;locus_tag=IXO1104_RS10665;product=N-acetyltransferase;protein_id=WP_011259098.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2313674 2315283 . + . ID=gene-IXO1104_RS10670;Name=IXO1104_RS10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10670;old_locus_tag=IXO1104_10600;pseudo=true NZ_CP047492.1 Protein Homology CDS 2313674 2315283 . + 0 ID=cds-IXO1104_RS10670;Parent=gene-IXO1104_RS10670;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160314.1;locus_tag=IXO1104_RS10670;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2315262 2315453 . + . ID=gene-IXO1104_RS10675;Name=IXO1104_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10675;old_locus_tag=IXO1104_10605 NZ_CP047492.1 Protein Homology CDS 2315262 2315453 . + 0 ID=cds-WP_027703372.1;Parent=gene-IXO1104_RS10675;Dbxref=Genbank:WP_027703372.1;Name=WP_027703372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155866.1;locus_tag=IXO1104_RS10675;product=hypothetical protein;protein_id=WP_027703372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2315450 2317585 . + . ID=gene-IXO1104_RS10680;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=IXO1104_RS10680;old_locus_tag=IXO1104_10610 NZ_CP047492.1 Protein Homology CDS 2315450 2317585 . + 0 ID=cds-WP_011408610.1;Parent=gene-IXO1104_RS10680;Dbxref=Genbank:WP_011408610.1;Name=WP_011408610.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902459.1;locus_tag=IXO1104_RS10680;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_011408610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2317795 2317871 . + . ID=gene-IXO1104_RS10685;Name=IXO1104_RS10685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10685;old_locus_tag=IXO1104_10615 NZ_CP047492.1 cmsearch ncRNA 2317795 2317871 . + . ID=rna-IXO1104_RS10685;Parent=gene-IXO1104_RS10685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10685;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2317795 2317871 . + . ID=exon-IXO1104_RS10685-1;Parent=rna-IXO1104_RS10685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10685;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2318069 2318845 . + . ID=gene-IXO1104_RS10690;Name=IXO1104_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10690;old_locus_tag=IXO1104_10620 NZ_CP047492.1 Protein Homology CDS 2318069 2318845 . + 0 ID=cds-WP_011408609.1;Parent=gene-IXO1104_RS10690;Dbxref=Genbank:WP_011408609.1;Name=WP_011408609.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919766.1;locus_tag=IXO1104_RS10690;product=NAD kinase;protein_id=WP_011408609.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2319013 2319969 . + . ID=gene-IXO1104_RS10695;Name=IXO1104_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10695;old_locus_tag=IXO1104_10625 NZ_CP047492.1 Protein Homology CDS 2319013 2319969 . + 0 ID=cds-WP_011259093.1;Parent=gene-IXO1104_RS10695;Dbxref=Genbank:WP_011259093.1;Name=WP_011259093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366538.1;locus_tag=IXO1104_RS10695;product=5'-nucleotidase;protein_id=WP_011259093.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2319990 2320550 . - . ID=gene-IXO1104_RS10700;Name=IXO1104_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10700;old_locus_tag=IXO1104_10630 NZ_CP047492.1 Protein Homology CDS 2319990 2320550 . - 0 ID=cds-WP_011259092.1;Parent=gene-IXO1104_RS10700;Dbxref=Genbank:WP_011259092.1;Name=WP_011259092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259092.1;locus_tag=IXO1104_RS10700;product=DUF2939 domain-containing protein;protein_id=WP_011259092.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2320592 2321611 . - . ID=gene-IXO1104_RS10705;Name=IXO1104_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10705;old_locus_tag=IXO1104_10635 NZ_CP047492.1 Protein Homology CDS 2320592 2321611 . - 0 ID=cds-WP_011259091.1;Parent=gene-IXO1104_RS10705;Dbxref=Genbank:WP_011259091.1;Name=WP_011259091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304892.1;locus_tag=IXO1104_RS10705;product=aldo/keto reductase;protein_id=WP_011259091.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2321584 2322270 . - . ID=gene-IXO1104_RS10710;Name=IXO1104_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10710;old_locus_tag=IXO1104_10640 NZ_CP047492.1 Protein Homology CDS 2321584 2322270 . - 0 ID=cds-WP_044756855.1;Parent=gene-IXO1104_RS10710;Dbxref=Genbank:WP_044756855.1;Name=WP_044756855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996685.1;locus_tag=IXO1104_RS10710;product=DUF2461 domain-containing protein;protein_id=WP_044756855.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2322267 2323712 . - . ID=gene-IXO1104_RS10715;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=IXO1104_RS10715;old_locus_tag=IXO1104_10645 NZ_CP047492.1 Protein Homology CDS 2322267 2323712 . - 0 ID=cds-WP_011259089.1;Parent=gene-IXO1104_RS10715;Dbxref=Genbank:WP_011259089.1;Name=WP_011259089.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366550.1;locus_tag=IXO1104_RS10715;product=exodeoxyribonuclease I;protein_id=WP_011259089.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2324016 2325383 . - . ID=gene-IXO1104_RS10720;Name=IXO1104_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10720;old_locus_tag=IXO1104_10650 NZ_CP047492.1 Protein Homology CDS 2324016 2325383 . - 0 ID=cds-WP_011259088.1;Parent=gene-IXO1104_RS10720;Dbxref=Genbank:WP_011259088.1;Name=WP_011259088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576314.1;locus_tag=IXO1104_RS10720;product=FAD-dependent monooxygenase;protein_id=WP_011259088.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2325555 2326826 . - . ID=gene-IXO1104_RS10725;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=IXO1104_RS10725;old_locus_tag=IXO1104_10655 NZ_CP047492.1 Protein Homology CDS 2325555 2326826 . - 0 ID=cds-WP_011259087.1;Parent=gene-IXO1104_RS10725;Dbxref=Genbank:WP_011259087.1;Name=WP_011259087.1;Ontology_term=GO:0019441,GO:0030429;gbkey=CDS;gene=kynU;go_function=kynureninase activity|0030429||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966269.1;locus_tag=IXO1104_RS10725;product=kynureninase;protein_id=WP_011259087.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2326860 2329014 . - . ID=gene-IXO1104_RS10730;Name=IXO1104_RS10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10730;pseudo=true NZ_CP047492.1 Protein Homology CDS 2326860 2329014 . - 0 ID=cds-IXO1104_RS10730;Parent=gene-IXO1104_RS10730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300684.1;locus_tag=IXO1104_RS10730;product=FUSC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2329027 2329557 . - . ID=gene-IXO1104_RS10735;Name=IXO1104_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10735;old_locus_tag=IXO1104_10670 NZ_CP047492.1 Protein Homology CDS 2329027 2329557 . - 0 ID=cds-WP_024744799.1;Parent=gene-IXO1104_RS10735;Dbxref=Genbank:WP_024744799.1;Name=WP_024744799.1;Ontology_term=GO:0000334,GO:0005506;gbkey=CDS;go_function=3-hydroxyanthranilate 3%2C4-dioxygenase activity|0000334||IEA,iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155876.1;locus_tag=IXO1104_RS10735;product=3-hydroxyanthranilate 3%2C4-dioxygenase;protein_id=WP_024744799.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2329646 2330308 . - . ID=gene-IXO1104_RS10740;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=IXO1104_RS10740;old_locus_tag=IXO1104_10675 NZ_CP047492.1 Protein Homology CDS 2329646 2330308 . - 0 ID=cds-WP_011408603.1;Parent=gene-IXO1104_RS10740;Dbxref=Genbank:WP_011408603.1;Name=WP_011408603.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902447.1;locus_tag=IXO1104_RS10740;product=carbonate dehydratase;protein_id=WP_011408603.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2330394 2331032 . - . ID=gene-IXO1104_RS10745;Name=IXO1104_RS10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10745;old_locus_tag=IXO1104_10680;pseudo=true NZ_CP047492.1 Protein Homology CDS 2330394 2331032 . - 0 ID=cds-IXO1104_RS10745;Parent=gene-IXO1104_RS10745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379580.1;locus_tag=IXO1104_RS10745;product=FMN-binding negative transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2331034 2331360 . - . ID=gene-IXO1104_RS10750;Name=IXO1104_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10750;old_locus_tag=IXO1104_10685 NZ_CP047492.1 Protein Homology CDS 2331034 2331360 . - 0 ID=cds-WP_011259081.1;Parent=gene-IXO1104_RS10750;Dbxref=Genbank:WP_011259081.1;Name=WP_011259081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158152.1;locus_tag=IXO1104_RS10750;product=hypothetical protein;protein_id=WP_011259081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2331357 2331662 . - . ID=gene-IXO1104_RS10755;Name=IXO1104_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10755;old_locus_tag=IXO1104_10690 NZ_CP047492.1 Protein Homology CDS 2331357 2331662 . - 0 ID=cds-WP_011408599.1;Parent=gene-IXO1104_RS10755;Dbxref=Genbank:WP_011408599.1;Name=WP_011408599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158153.1;locus_tag=IXO1104_RS10755;product=hypothetical protein;protein_id=WP_011408599.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2331659 2331916 . - . ID=gene-IXO1104_RS10760;Name=IXO1104_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10760;old_locus_tag=IXO1104_10695 NZ_CP047492.1 Protein Homology CDS 2331659 2331916 . - 0 ID=cds-WP_011259080.1;Parent=gene-IXO1104_RS10760;Dbxref=Genbank:WP_011259080.1;Name=WP_011259080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300679.1;locus_tag=IXO1104_RS10760;product=hypothetical protein;protein_id=WP_011259080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2331918 2333312 . - . ID=gene-IXO1104_RS10765;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=IXO1104_RS10765;old_locus_tag=IXO1104_10700 NZ_CP047492.1 Protein Homology CDS 2331918 2333312 . - 0 ID=cds-WP_011259079.1;Parent=gene-IXO1104_RS10765;Dbxref=Genbank:WP_011259079.1;Name=WP_011259079.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237793.1;locus_tag=IXO1104_RS10765;product=asparagine--tRNA ligase;protein_id=WP_011259079.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2333519 2333857 . + . ID=gene-IXO1104_RS10770;Name=IXO1104_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10770;old_locus_tag=IXO1104_10705 NZ_CP047492.1 Protein Homology CDS 2333519 2333857 . + 0 ID=cds-WP_012444809.1;Parent=gene-IXO1104_RS10770;Dbxref=Genbank:WP_012444809.1;Name=WP_012444809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966300.1;locus_tag=IXO1104_RS10770;product=iron-sulfur cluster assembly accessory protein;protein_id=WP_012444809.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2334212 2334643 . + . ID=gene-IXO1104_RS10775;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=IXO1104_RS10775;old_locus_tag=IXO1104_10710 NZ_CP047492.1 Protein Homology CDS 2334212 2334643 . + 0 ID=cds-WP_011259077.1;Parent=gene-IXO1104_RS10775;Dbxref=Genbank:WP_011259077.1;Name=WP_011259077.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991245.1;locus_tag=IXO1104_RS10775;product=30S ribosomal protein S6;protein_id=WP_011259077.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2334655 2334885 . + . ID=gene-IXO1104_RS10780;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=IXO1104_RS10780;old_locus_tag=IXO1104_10715 NZ_CP047492.1 Protein Homology CDS 2334655 2334885 . + 0 ID=cds-WP_005991243.1;Parent=gene-IXO1104_RS10780;Dbxref=Genbank:WP_005991243.1;Name=WP_005991243.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=IXO1104_RS10780;product=30S ribosomal protein S18;protein_id=WP_005991243.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2335152 2335601 . + . ID=gene-IXO1104_RS10785;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=IXO1104_RS10785;old_locus_tag=IXO1104_10720 NZ_CP047492.1 Protein Homology CDS 2335152 2335601 . + 0 ID=cds-WP_011259076.1;Parent=gene-IXO1104_RS10785;Dbxref=Genbank:WP_011259076.1;Name=WP_011259076.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379584.1;locus_tag=IXO1104_RS10785;product=50S ribosomal protein L9;protein_id=WP_011259076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2335811 2339314 . + . ID=gene-IXO1104_RS10790;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=IXO1104_RS10790;old_locus_tag=IXO1104_10725 NZ_CP047492.1 Protein Homology CDS 2335811 2339314 . + 0 ID=cds-WP_012444810.1;Parent=gene-IXO1104_RS10790;Dbxref=Genbank:WP_012444810.1;Name=WP_012444810.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451583.1;locus_tag=IXO1104_RS10790;product=chromosome segregation protein SMC;protein_id=WP_012444810.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2339371 2340102 . + . ID=gene-IXO1104_RS10795;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10795;old_locus_tag=IXO1104_10730 NZ_CP047492.1 Protein Homology CDS 2339371 2340102 . + 0 ID=cds-WP_011259074.1;Parent=gene-IXO1104_RS10795;Dbxref=Genbank:WP_011259074.1;Name=WP_011259074.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903841.1;locus_tag=IXO1104_RS10795;product=cell division protein ZipA;protein_id=WP_011259074.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2340109 2340490 . + . ID=gene-IXO1104_RS10800;Name=IXO1104_RS10800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10800;pseudo=true NZ_CP047492.1 Protein Homology CDS 2340109 2340490 . + 0 ID=cds-IXO1104_RS10800;Parent=gene-IXO1104_RS10800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158159.1;locus_tag=IXO1104_RS10800;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2340661 2340888 . - . ID=gene-IXO1104_RS10805;Name=IXO1104_RS10805;end_range=2340888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10805;old_locus_tag=IXO1104_10735;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2340661 2340888 . - 0 ID=cds-IXO1104_RS10805;Parent=gene-IXO1104_RS10805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2340888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159896.1;locus_tag=IXO1104_RS10805;partial=true;product=aminotransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2340958 2343483 . + . ID=gene-IXO1104_RS10810;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10810;old_locus_tag=IXO1104_10740 NZ_CP047492.1 Protein Homology CDS 2340958 2343483 . + 0 ID=cds-WP_011259072.1;Parent=gene-IXO1104_RS10810;Dbxref=Genbank:WP_011259072.1;Name=WP_011259072.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502845.1;locus_tag=IXO1104_RS10810;product=NAD-dependent DNA ligase LigA;protein_id=WP_011259072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2343480 2344442 . + . ID=gene-IXO1104_RS10815;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10815;old_locus_tag=IXO1104_10745 NZ_CP047492.1 Protein Homology CDS 2343480 2344442 . + 0 ID=cds-WP_011259071.1;Parent=gene-IXO1104_RS10815;Dbxref=Genbank:WP_011259071.1;Name=WP_011259071.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158162.1;locus_tag=IXO1104_RS10815;product=EF-P lysine aminoacylase EpmA;protein_id=WP_011259071.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2344552 2345238 . + . ID=gene-IXO1104_RS10820;Name=IXO1104_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10820;old_locus_tag=IXO1104_10750 NZ_CP047492.1 Protein Homology CDS 2344552 2345238 . + 0 ID=cds-WP_041182140.1;Parent=gene-IXO1104_RS10820;Dbxref=Genbank:WP_041182140.1;Name=WP_041182140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089862.1;locus_tag=IXO1104_RS10820;product=DUF3011 domain-containing protein;protein_id=WP_041182140.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2345301 2345376 . + . ID=gene-IXO1104_RS10825;Name=IXO1104_RS10825;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS10825;old_locus_tag=IXO1104_10755 NZ_CP047492.1 cmsearch ncRNA 2345301 2345376 . + . ID=rna-IXO1104_RS10825;Parent=gene-IXO1104_RS10825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10825;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2345301 2345376 . + . ID=exon-IXO1104_RS10825-1;Parent=rna-IXO1104_RS10825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS10825;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2345439 2346503 . + . ID=gene-IXO1104_RS10830;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10830;old_locus_tag=IXO1104_10760 NZ_CP047492.1 Protein Homology CDS 2345439 2346503 . + 0 ID=cds-WP_011259069.1;Parent=gene-IXO1104_RS10830;Dbxref=Genbank:WP_011259069.1;Name=WP_011259069.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051043.1;locus_tag=IXO1104_RS10830;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_011259069.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2346713 2349409 . + . ID=gene-IXO1104_RS10835;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10835;old_locus_tag=IXO1104_10765 NZ_CP047492.1 Protein Homology CDS 2346713 2349409 . + 0 ID=cds-WP_011259068.1;Parent=gene-IXO1104_RS10835;Dbxref=Genbank:WP_011259068.1;Name=WP_011259068.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158164.1;locus_tag=IXO1104_RS10835;product=DNA gyrase subunit A;protein_id=WP_011259068.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2349542 2350323 . + . ID=gene-IXO1104_RS10840;Name=IXO1104_RS10840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10840;old_locus_tag=IXO1104_10770;pseudo=true NZ_CP047492.1 Protein Homology CDS 2349542 2350323 . + 0 ID=cds-IXO1104_RS10840;Parent=gene-IXO1104_RS10840;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558219.1;locus_tag=IXO1104_RS10840;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2350445 2351197 . - . ID=gene-IXO1104_RS10845;Name=IXO1104_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10845;old_locus_tag=IXO1104_10775 NZ_CP047492.1 Protein Homology CDS 2350445 2351197 . - 0 ID=cds-WP_012444817.1;Parent=gene-IXO1104_RS10845;Dbxref=Genbank:WP_012444817.1;Name=WP_012444817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503761.1;locus_tag=IXO1104_RS10845;product=hypothetical protein;protein_id=WP_012444817.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2351327 2352421 . - . ID=gene-IXO1104_RS10850;Name=IXO1104_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10850;old_locus_tag=IXO1104_10780 NZ_CP047492.1 Protein Homology CDS 2351327 2352421 . - 0 ID=cds-WP_012444818.1;Parent=gene-IXO1104_RS10850;Dbxref=Genbank:WP_012444818.1;Name=WP_012444818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408590.1;locus_tag=IXO1104_RS10850;product=acyltransferase;protein_id=WP_012444818.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2352781 2354448 . - . ID=gene-IXO1104_RS10855;Name=IXO1104_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10855;old_locus_tag=IXO1104_10785 NZ_CP047492.1 Protein Homology CDS 2352781 2354448 . - 0 ID=cds-WP_075239345.1;Parent=gene-IXO1104_RS10855;Dbxref=Genbank:WP_075239345.1;Name=WP_075239345.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165198.1;locus_tag=IXO1104_RS10855;product=urocanate hydratase;protein_id=WP_075239345.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2354465 2355322 . - . ID=gene-IXO1104_RS10860;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=IXO1104_RS10860;old_locus_tag=IXO1104_10790 NZ_CP047492.1 Protein Homology CDS 2354465 2355322 . - 0 ID=cds-WP_011259062.1;Parent=gene-IXO1104_RS10860;Dbxref=Genbank:WP_011259062.1;Name=WP_011259062.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485831.1;locus_tag=IXO1104_RS10860;product=N-formylglutamate deformylase;protein_id=WP_011259062.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2355501 2357042 . - . ID=gene-IXO1104_RS10865;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=IXO1104_RS10865;old_locus_tag=IXO1104_10795 NZ_CP047492.1 Protein Homology CDS 2355501 2357042 . - 0 ID=cds-WP_012444820.1;Parent=gene-IXO1104_RS10865;Dbxref=Genbank:WP_012444820.1;Name=WP_012444820.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158168.1;locus_tag=IXO1104_RS10865;product=histidine ammonia-lyase;protein_id=WP_012444820.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2357056 2358261 . - . ID=gene-IXO1104_RS10870;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=IXO1104_RS10870;old_locus_tag=IXO1104_10800 NZ_CP047492.1 Protein Homology CDS 2357056 2358261 . - 0 ID=cds-WP_011259060.1;Parent=gene-IXO1104_RS10870;Dbxref=Genbank:WP_011259060.1;Name=WP_011259060.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158169.1;locus_tag=IXO1104_RS10870;product=imidazolonepropionase;protein_id=WP_011259060.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2358322 2359692 . + . ID=gene-IXO1104_RS10875;Name=IXO1104_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10875;old_locus_tag=IXO1104_10805 NZ_CP047492.1 Protein Homology CDS 2358322 2359692 . + 0 ID=cds-WP_041182138.1;Parent=gene-IXO1104_RS10875;Dbxref=Genbank:WP_041182138.1;Name=WP_041182138.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444821.1;locus_tag=IXO1104_RS10875;product=formimidoylglutamate deiminase;protein_id=WP_041182138.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2360017 2360754 . + . ID=gene-IXO1104_RS10880;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=IXO1104_RS10880;old_locus_tag=IXO1104_10810 NZ_CP047492.1 Protein Homology CDS 2360017 2360754 . + 0 ID=cds-WP_044756852.1;Parent=gene-IXO1104_RS10880;Dbxref=Genbank:WP_044756852.1;Name=WP_044756852.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158172.1;locus_tag=IXO1104_RS10880;product=histidine utilization repressor;protein_id=WP_044756852.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2360911 2361912 . - . ID=gene-IXO1104_RS10885;Name=IXO1104_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10885;old_locus_tag=IXO1104_10815 NZ_CP047492.1 Protein Homology CDS 2360911 2361912 . - 0 ID=cds-WP_027703736.1;Parent=gene-IXO1104_RS10885;Dbxref=Genbank:WP_027703736.1;Name=WP_027703736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347042.1;locus_tag=IXO1104_RS10885;product=restriction endonuclease;protein_id=WP_027703736.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2362479 2363042 . - . ID=gene-IXO1104_RS10890;Name=IXO1104_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10890;old_locus_tag=IXO1104_10820 NZ_CP047492.1 Protein Homology CDS 2362479 2363042 . - 0 ID=cds-WP_011259056.1;Parent=gene-IXO1104_RS10890;Dbxref=Genbank:WP_011259056.1;Name=WP_011259056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158174.1;locus_tag=IXO1104_RS10890;product=phasin family protein;protein_id=WP_011259056.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2363204 2363479 . - . ID=gene-IXO1104_RS10895;Name=IXO1104_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10895;old_locus_tag=IXO1104_10825 NZ_CP047492.1 Protein Homology CDS 2363204 2363479 . - 0 ID=cds-WP_011259055.1;Parent=gene-IXO1104_RS10895;Dbxref=Genbank:WP_011259055.1;Name=WP_011259055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503751.1;locus_tag=IXO1104_RS10895;product=polyhydroxyalkanoic acid system family protein;protein_id=WP_011259055.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2363720 2364529 . + . ID=gene-IXO1104_RS10900;Name=IXO1104_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10900;old_locus_tag=IXO1104_10830 NZ_CP047492.1 Protein Homology CDS 2363720 2364529 . + 0 ID=cds-WP_012444823.1;Parent=gene-IXO1104_RS10900;Dbxref=Genbank:WP_012444823.1;Name=WP_012444823.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904651.1;locus_tag=IXO1104_RS10900;product=FHA domain-containing protein;protein_id=WP_012444823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2364471 2365127 . - . ID=gene-IXO1104_RS10905;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS10905;old_locus_tag=IXO1104_10835 NZ_CP047492.1 Protein Homology CDS 2364471 2365127 . - 0 ID=cds-WP_011408583.1;Parent=gene-IXO1104_RS10905;Dbxref=Genbank:WP_011408583.1;Name=WP_011408583.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036769.1;locus_tag=IXO1104_RS10905;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_011408583.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2365427 2366395 . - . ID=gene-IXO1104_RS10910;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=IXO1104_RS10910;old_locus_tag=IXO1104_10840 NZ_CP047492.1 Protein Homology CDS 2365427 2366395 . - 0 ID=cds-WP_011408582.1;Parent=gene-IXO1104_RS10910;Dbxref=Genbank:WP_011408582.1;Name=WP_011408582.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914864.1;locus_tag=IXO1104_RS10910;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_011408582.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2366570 2367655 . + . ID=gene-IXO1104_RS10915;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=IXO1104_RS10915;old_locus_tag=IXO1104_10845 NZ_CP047492.1 Protein Homology CDS 2366570 2367655 . + 0 ID=cds-WP_011259052.1;Parent=gene-IXO1104_RS10915;Dbxref=Genbank:WP_011259052.1;Name=WP_011259052.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300927.1;locus_tag=IXO1104_RS10915;product=phosphoserine transaminase;protein_id=WP_011259052.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2367704 2368912 . + . ID=gene-IXO1104_RS10920;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10920;old_locus_tag=IXO1104_10850 NZ_CP047492.1 Protein Homology CDS 2367704 2368912 . + 0 ID=cds-WP_011259051.1;Parent=gene-IXO1104_RS10920;Dbxref=Genbank:WP_011259051.1;Name=WP_011259051.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300926.1;locus_tag=IXO1104_RS10920;product=prephenate dehydratase;protein_id=WP_011259051.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2369034 2370356 . + . ID=gene-IXO1104_RS10925;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=IXO1104_RS10925;old_locus_tag=IXO1104_10855 NZ_CP047492.1 Protein Homology CDS 2369034 2370356 . + 0 ID=cds-WP_011259050.1;Parent=gene-IXO1104_RS10925;Dbxref=Genbank:WP_011259050.1;Name=WP_011259050.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259050.1;locus_tag=IXO1104_RS10925;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011259050.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2370380 2370994 . - . ID=gene-IXO1104_RS10930;Name=IXO1104_RS10930;end_range=2370994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10930;old_locus_tag=IXO1104_10860;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2370380 2370994 . - 0 ID=cds-IXO1104_RS10930;Parent=gene-IXO1104_RS10930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2370994,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS10930;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2370998 2371272 . - . ID=gene-IXO1104_RS10935;Name=IXO1104_RS10935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10935;old_locus_tag=IXO1104_10865;partial=true;pseudo=true;start_range=.,2370998 NZ_CP047492.1 Protein Homology CDS 2370998 2371272 . - 0 ID=cds-IXO1104_RS10935;Parent=gene-IXO1104_RS10935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611270.1%2CRefSeq:WP_076612143.1;locus_tag=IXO1104_RS10935;partial=true;product=transposase;pseudo=true;start_range=.,2370998;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2371402 2371509 . - . ID=gene-IXO1104_RS10940;Name=IXO1104_RS10940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10940;old_locus_tag=IXO1104_10870;partial=true;pseudo=true;start_range=.,2371402 NZ_CP047492.1 Protein Homology CDS 2371402 2371509 . - 0 ID=cds-IXO1104_RS10940;Parent=gene-IXO1104_RS10940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS10940;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,2371402;transl_table=11 NZ_CP047492.1 RefSeq gene 2371621 2372634 . - . ID=gene-IXO1104_RS10945;Name=IXO1104_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10945;old_locus_tag=IXO1104_10875 NZ_CP047492.1 Protein Homology CDS 2371621 2372634 . - 0 ID=cds-WP_011259047.1;Parent=gene-IXO1104_RS10945;Dbxref=Genbank:WP_011259047.1;Name=WP_011259047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038670.1;locus_tag=IXO1104_RS10945;product=hypothetical protein;protein_id=WP_011259047.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2373236 2381371 . + . ID=gene-IXO1104_RS10950;Name=IXO1104_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10950;old_locus_tag=IXO1104_10880 NZ_CP047492.1 Protein Homology CDS 2373236 2381371 . + 0 ID=cds-WP_075240658.1;Parent=gene-IXO1104_RS10950;Dbxref=Genbank:WP_075240658.1;Name=WP_075240658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444829.1;locus_tag=IXO1104_RS10950;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_075240658.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2381648 2382259 . - . ID=gene-IXO1104_RS10955;Name=IXO1104_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10955;old_locus_tag=IXO1104_10885 NZ_CP047492.1 Protein Homology CDS 2381648 2382259 . - 0 ID=cds-WP_011259043.1;Parent=gene-IXO1104_RS10955;Dbxref=Genbank:WP_011259043.1;Name=WP_011259043.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916054.1;locus_tag=IXO1104_RS10955;product=response regulator;protein_id=WP_011259043.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2382256 2383278 . - . ID=gene-IXO1104_RS10960;Name=IXO1104_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10960;old_locus_tag=IXO1104_10890 NZ_CP047492.1 Protein Homology CDS 2382256 2383278 . - 0 ID=cds-WP_027703759.1;Parent=gene-IXO1104_RS10960;Dbxref=Genbank:WP_027703759.1;Name=WP_027703759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159768.1;locus_tag=IXO1104_RS10960;product=HAMP domain-containing histidine kinase;protein_id=WP_027703759.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2383397 2384881 . - . ID=gene-IXO1104_RS10965;Name=IXO1104_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10965;old_locus_tag=IXO1104_10895 NZ_CP047492.1 Protein Homology CDS 2383397 2384881 . - 0 ID=cds-WP_027703760.1;Parent=gene-IXO1104_RS10965;Dbxref=Genbank:WP_027703760.1;Name=WP_027703760.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159769.1;locus_tag=IXO1104_RS10965;product=efflux transporter outer membrane subunit;protein_id=WP_027703760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2384878 2387970 . - . ID=gene-IXO1104_RS10970;Name=IXO1104_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10970;old_locus_tag=IXO1104_10900 NZ_CP047492.1 Protein Homology CDS 2384878 2387970 . - 0 ID=cds-WP_012444833.1;Parent=gene-IXO1104_RS10970;Dbxref=Genbank:WP_012444833.1;Name=WP_012444833.1;Ontology_term=GO:0051139,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571964.1;locus_tag=IXO1104_RS10970;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=WP_012444833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2387963 2389078 . - . ID=gene-IXO1104_RS10975;Name=IXO1104_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10975;old_locus_tag=IXO1104_10905 NZ_CP047492.1 Protein Homology CDS 2387963 2389078 . - 0 ID=cds-WP_012444834.1;Parent=gene-IXO1104_RS10975;Dbxref=Genbank:WP_012444834.1;Name=WP_012444834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373460.1;locus_tag=IXO1104_RS10975;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012444834.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2389577 2392312 . - . ID=gene-IXO1104_RS10980;Name=IXO1104_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10980;old_locus_tag=IXO1104_10910 NZ_CP047492.1 Protein Homology CDS 2389577 2392312 . - 0 ID=cds-WP_012444836.1;Parent=gene-IXO1104_RS10980;Dbxref=Genbank:WP_012444836.1;Name=WP_012444836.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160179.1;locus_tag=IXO1104_RS10980;product=S8 family serine peptidase;protein_id=WP_012444836.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2393144 2394520 . + . ID=gene-IXO1104_RS10985;Name=IXO1104_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS10985;old_locus_tag=IXO1104_10915 NZ_CP047492.1 Protein Homology CDS 2393144 2394520 . + 0 ID=cds-WP_164994127.1;Parent=gene-IXO1104_RS10985;Dbxref=Genbank:WP_164994127.1;Name=WP_164994127.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS10985;product=IS5 family transposase;protein_id=WP_164994127.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2394545 2395038 . - . ID=gene-IXO1104_RS10990;Name=IXO1104_RS10990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10990;old_locus_tag=IXO1104_10920;partial=true;pseudo=true;start_range=.,2394545 NZ_CP047492.1 Protein Homology CDS 2394545 2395038 . - 0 ID=cds-IXO1104_RS10990;Parent=gene-IXO1104_RS10990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=IXO1104_RS10990;partial=true;product=transposase;pseudo=true;start_range=.,2394545;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2395265 2396756 . + . ID=gene-IXO1104_RS10995;Name=IXO1104_RS10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS10995;old_locus_tag=IXO1104_10925;pseudo=true NZ_CP047492.1 Protein Homology CDS 2395265 2396756 . + 0 ID=cds-IXO1104_RS10995;Parent=gene-IXO1104_RS10995;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS10995;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2397081 2398265 . + . ID=gene-IXO1104_RS11000;Name=IXO1104_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11000;old_locus_tag=IXO1104_10930 NZ_CP047492.1 Protein Homology CDS 2397081 2398265 . + 0 ID=cds-WP_075240550.1;Parent=gene-IXO1104_RS11000;Dbxref=Genbank:WP_075240550.1;Name=WP_075240550.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408569.1;locus_tag=IXO1104_RS11000;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_075240550.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2398303 2399223 . + . ID=gene-IXO1104_RS11005;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=IXO1104_RS11005;old_locus_tag=IXO1104_10935 NZ_CP047492.1 Protein Homology CDS 2398303 2399223 . + 0 ID=cds-WP_011408568.1;Parent=gene-IXO1104_RS11005;Dbxref=Genbank:WP_011408568.1;Name=WP_011408568.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408568.1;locus_tag=IXO1104_RS11005;product=GTP cyclohydrolase FolE2;protein_id=WP_011408568.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2399717 2399791 . - . ID=gene-IXO1104_RS11010;Name=IXO1104_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11010;old_locus_tag=IXO1104_10940 NZ_CP047492.1 tRNAscan-SE tRNA 2399717 2399791 . - . ID=rna-IXO1104_RS11010;Parent=gene-IXO1104_RS11010;anticodon=(pos:complement(2399756..2399758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11010;product=tRNA-Glu NZ_CP047492.1 tRNAscan-SE exon 2399717 2399791 . - . ID=exon-IXO1104_RS11010-1;Parent=rna-IXO1104_RS11010;anticodon=(pos:complement(2399756..2399758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11010;product=tRNA-Glu NZ_CP047492.1 RefSeq gene 2399839 2401206 . + . ID=gene-IXO1104_RS11015;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=IXO1104_RS11015;old_locus_tag=IXO1104_10945 NZ_CP047492.1 Protein Homology CDS 2399839 2401206 . + 0 ID=cds-WP_011259034.1;Parent=gene-IXO1104_RS11015;Dbxref=Genbank:WP_011259034.1;Name=WP_011259034.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116093.1;locus_tag=IXO1104_RS11015;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_011259034.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2401210 2401695 . + . ID=gene-IXO1104_RS11020;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=IXO1104_RS11020;old_locus_tag=IXO1104_10950 NZ_CP047492.1 Protein Homology CDS 2401210 2401695 . + 0 ID=cds-WP_011259033.1;Parent=gene-IXO1104_RS11020;Dbxref=Genbank:WP_011259033.1;Name=WP_011259033.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169088.1;locus_tag=IXO1104_RS11020;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_011259033.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2401731 2402546 . + . ID=gene-IXO1104_RS11025;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=IXO1104_RS11025;old_locus_tag=IXO1104_10955 NZ_CP047492.1 Protein Homology CDS 2401731 2402546 . + 0 ID=cds-WP_011259032.1;Parent=gene-IXO1104_RS11025;Dbxref=Genbank:WP_011259032.1;Name=WP_011259032.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408567.1;locus_tag=IXO1104_RS11025;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_011259032.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2402543 2403385 . + . ID=gene-IXO1104_RS11030;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11030;old_locus_tag=IXO1104_10960 NZ_CP047492.1 Protein Homology CDS 2402543 2403385 . + 0 ID=cds-WP_011259031.1;Parent=gene-IXO1104_RS11030;Dbxref=Genbank:WP_011259031.1;Name=WP_011259031.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259031.1;locus_tag=IXO1104_RS11030;product=pantoate--beta-alanine ligase;protein_id=WP_011259031.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2403564 2403944 . + . ID=gene-IXO1104_RS11035;Name=IXO1104_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11035;old_locus_tag=IXO1104_10965 NZ_CP047492.1 Protein Homology CDS 2403564 2403944 . + 0 ID=cds-WP_011259030.1;Parent=gene-IXO1104_RS11035;Dbxref=Genbank:WP_011259030.1;Name=WP_011259030.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036943.1;locus_tag=IXO1104_RS11035;product=aspartate 1-decarboxylase;protein_id=WP_011259030.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2403941 2405455 . + . ID=gene-IXO1104_RS11040;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=IXO1104_RS11040;old_locus_tag=IXO1104_10970 NZ_CP047492.1 Protein Homology CDS 2403941 2405455 . + 0 ID=cds-WP_011259029.1;Parent=gene-IXO1104_RS11040;Dbxref=Genbank:WP_011259029.1;Name=WP_011259029.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300464.1;locus_tag=IXO1104_RS11040;product=glucose-6-phosphate isomerase;protein_id=WP_011259029.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2405614 2405958 . + . ID=gene-IXO1104_RS11045;Name=IXO1104_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11045;old_locus_tag=IXO1104_10975 NZ_CP047492.1 Protein Homology CDS 2405614 2405958 . + 0 ID=cds-WP_011259028.1;Parent=gene-IXO1104_RS11045;Dbxref=Genbank:WP_011259028.1;Name=WP_011259028.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371400.1;locus_tag=IXO1104_RS11045;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_011259028.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2405962 2406584 . + . ID=gene-IXO1104_RS11050;Name=IXO1104_RS11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11050;old_locus_tag=IXO1104_10980;pseudo=true NZ_CP047492.1 Protein Homology CDS 2405962 2406584 . + 0 ID=cds-IXO1104_RS11050;Parent=gene-IXO1104_RS11050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408564.1;locus_tag=IXO1104_RS11050;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2406819 2408774 . - . ID=gene-IXO1104_RS11055;Name=IXO1104_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11055;old_locus_tag=IXO1104_10985 NZ_CP047492.1 Protein Homology CDS 2406819 2408774 . - 0 ID=cds-WP_011408563.1;Parent=gene-IXO1104_RS11055;Dbxref=Genbank:WP_011408563.1;Name=WP_011408563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463094.1;locus_tag=IXO1104_RS11055;product=DUF839 domain-containing protein;protein_id=WP_011408563.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2409208 2411820 . + . ID=gene-IXO1104_RS11060;Name=IXO1104_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11060;old_locus_tag=IXO1104_10990 NZ_CP047492.1 Protein Homology CDS 2409208 2411820 . + 0 ID=cds-WP_069965084.1;Parent=gene-IXO1104_RS11060;Dbxref=Genbank:WP_069965084.1;Name=WP_069965084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300459.1;locus_tag=IXO1104_RS11060;product=exo 1%2C3/1%2C4-beta-D-glucan glucohydrolase;protein_id=WP_069965084.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2412080 2413642 . + . ID=gene-IXO1104_RS11065;Name=IXO1104_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11065;old_locus_tag=IXO1104_11000 NZ_CP047492.1 Protein Homology CDS 2412080 2413642 . + 0 ID=cds-WP_011408561.1;Parent=gene-IXO1104_RS11065;Dbxref=Genbank:WP_011408561.1;Name=WP_011408561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116097.1;locus_tag=IXO1104_RS11065;product=sodium/sugar symporter;protein_id=WP_011408561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2413751 2413825 . - . ID=gene-IXO1104_RS11070;Name=IXO1104_RS11070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11070;old_locus_tag=IXO1104_11005 NZ_CP047492.1 cmsearch ncRNA 2413751 2413825 . - . ID=rna-IXO1104_RS11070;Parent=gene-IXO1104_RS11070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11070;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2413751 2413825 . - . ID=exon-IXO1104_RS11070-1;Parent=rna-IXO1104_RS11070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11070;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2413887 2415743 . - . ID=gene-IXO1104_RS11075;Name=IXO1104_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11075;old_locus_tag=IXO1104_11010 NZ_CP047492.1 Protein Homology CDS 2413887 2415743 . - 0 ID=cds-WP_011259023.1;Parent=gene-IXO1104_RS11075;Dbxref=Genbank:WP_011259023.1;Name=WP_011259023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158049.1;locus_tag=IXO1104_RS11075;product=EAL domain-containing protein;protein_id=WP_011259023.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2416048 2416500 . + . ID=gene-IXO1104_RS11080;Name=IXO1104_RS11080;end_range=2416500,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11080;old_locus_tag=IXO1104_11015;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2416048 2416500 . + 0 ID=cds-IXO1104_RS11080;Parent=gene-IXO1104_RS11080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2416500,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS11080;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2416843 2416929 . - . ID=gene-IXO1104_RS11085;Name=IXO1104_RS11085;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11085;old_locus_tag=IXO1104_11020 NZ_CP047492.1 tRNAscan-SE tRNA 2416843 2416929 . - . ID=rna-IXO1104_RS11085;Parent=gene-IXO1104_RS11085;anticodon=(pos:complement(2416893..2416895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11085;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 2416843 2416929 . - . ID=exon-IXO1104_RS11085-1;Parent=rna-IXO1104_RS11085;anticodon=(pos:complement(2416893..2416895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11085;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 2417070 2419259 . - . ID=gene-IXO1104_RS11090;Name=IXO1104_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11090;old_locus_tag=IXO1104_11025 NZ_CP047492.1 Protein Homology CDS 2417070 2419259 . - 0 ID=cds-WP_041182436.1;Parent=gene-IXO1104_RS11090;Dbxref=Genbank:WP_041182436.1;Name=WP_041182436.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155718.1;locus_tag=IXO1104_RS11090;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_041182436.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2419388 2421166 . - . ID=gene-IXO1104_RS11095;Name=IXO1104_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11095;old_locus_tag=IXO1104_11030 NZ_CP047492.1 Protein Homology CDS 2419388 2421166 . - 0 ID=cds-WP_012444858.1;Parent=gene-IXO1104_RS11095;Dbxref=Genbank:WP_012444858.1;Name=WP_012444858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408559.1;locus_tag=IXO1104_RS11095;product=M14 family metallopeptidase;protein_id=WP_012444858.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2421392 2422359 . + . ID=gene-IXO1104_RS11100;Name=IXO1104_RS11100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11100;old_locus_tag=IXO1104_11035;pseudo=true NZ_CP047492.1 Protein Homology CDS 2421392 2422359 . + 0 ID=cds-IXO1104_RS11100;Parent=gene-IXO1104_RS11100;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160292.1;locus_tag=IXO1104_RS11100;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2422367 2422975 . + . ID=gene-IXO1104_RS11105;Name=IXO1104_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11105;old_locus_tag=IXO1104_11040 NZ_CP047492.1 Protein Homology CDS 2422367 2422975 . + 0 ID=cds-WP_011408557.1;Parent=gene-IXO1104_RS11105;Dbxref=Genbank:WP_011408557.1;Name=WP_011408557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300253.1;locus_tag=IXO1104_RS11105;product=rhomboid family intramembrane serine protease;protein_id=WP_011408557.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2423309 2423497 . - . ID=gene-IXO1104_RS11110;Name=IXO1104_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11110;old_locus_tag=IXO1104_11045 NZ_CP047492.1 Protein Homology CDS 2423309 2423497 . - 0 ID=cds-WP_044756845.1;Parent=gene-IXO1104_RS11110;Dbxref=Genbank:WP_044756845.1;Name=WP_044756845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483521.1;locus_tag=IXO1104_RS11110;product=hypothetical protein;protein_id=WP_044756845.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2423681 2423995 . + . ID=gene-IXO1104_RS11115;Name=IXO1104_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11115;old_locus_tag=IXO1104_11050 NZ_CP047492.1 Protein Homology CDS 2423681 2423995 . + 0 ID=cds-WP_011408556.1;Parent=gene-IXO1104_RS11115;Dbxref=Genbank:WP_011408556.1;Name=WP_011408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366253.1;locus_tag=IXO1104_RS11115;product=N-acetyltransferase;protein_id=WP_011408556.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2424046 2424879 . + . ID=gene-IXO1104_RS11120;Name=IXO1104_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11120;old_locus_tag=IXO1104_11055 NZ_CP047492.1 Protein Homology CDS 2424046 2424879 . + 0 ID=cds-WP_075239902.1;Parent=gene-IXO1104_RS11120;Dbxref=Genbank:WP_075239902.1;Name=WP_075239902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089774.1;locus_tag=IXO1104_RS11120;product=DUF4163 domain-containing protein;protein_id=WP_075239902.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2424946 2425446 . + . ID=gene-IXO1104_RS11125;Name=IXO1104_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11125;old_locus_tag=IXO1104_11060 NZ_CP047492.1 Protein Homology CDS 2424946 2425446 . + 0 ID=cds-WP_012444862.1;Parent=gene-IXO1104_RS11125;Dbxref=Genbank:WP_012444862.1;Name=WP_012444862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366256.1;locus_tag=IXO1104_RS11125;product=MarR family transcriptional regulator;protein_id=WP_012444862.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2425538 2426281 . - . ID=gene-IXO1104_RS11130;Name=IXO1104_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11130;old_locus_tag=IXO1104_11065 NZ_CP047492.1 Protein Homology CDS 2425538 2426281 . - 0 ID=cds-WP_012444863.1;Parent=gene-IXO1104_RS11130;Dbxref=Genbank:WP_012444863.1;Name=WP_012444863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444863.1;locus_tag=IXO1104_RS11130;product=hypothetical protein;protein_id=WP_012444863.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2426278 2426778 . - . ID=gene-IXO1104_RS11135;Name=IXO1104_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11135;old_locus_tag=IXO1104_11070 NZ_CP047492.1 Protein Homology CDS 2426278 2426778 . - 0 ID=cds-WP_011259013.1;Parent=gene-IXO1104_RS11135;Dbxref=Genbank:WP_011259013.1;Name=WP_011259013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259013.1;locus_tag=IXO1104_RS11135;product=RNA polymerase sigma factor;protein_id=WP_011259013.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2427325 2428200 . + . ID=gene-IXO1104_RS11140;Name=IXO1104_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11140;old_locus_tag=IXO1104_11075 NZ_CP047492.1 Protein Homology CDS 2427325 2428200 . + 0 ID=cds-WP_228383594.1;Parent=gene-IXO1104_RS11140;Dbxref=Genbank:WP_228383594.1;Name=WP_228383594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=IXO1104_RS11140;product=S8 family serine peptidase;protein_id=WP_228383594.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2428303 2429016 . + . ID=gene-IXO1104_RS11145;Name=IXO1104_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11145;old_locus_tag=IXO1104_11080 NZ_CP047492.1 Protein Homology CDS 2428303 2429016 . + 0 ID=cds-WP_011259011.1;Parent=gene-IXO1104_RS11145;Dbxref=Genbank:WP_011259011.1;Name=WP_011259011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117317.1;locus_tag=IXO1104_RS11145;product=hypothetical protein;protein_id=WP_011259011.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2429358 2429486 . + . ID=gene-IXO1104_RS11150;Name=IXO1104_RS11150;end_range=2429486,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11150;partial=true;pseudo=true;start_range=.,2429358 NZ_CP047492.1 Protein Homology CDS 2429358 2429486 . + 0 ID=cds-IXO1104_RS11150;Parent=gene-IXO1104_RS11150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2429486,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257360.1;locus_tag=IXO1104_RS11150;partial=true;product=HTH domain-containing protein;pseudo=true;start_range=.,2429358;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2429548 2431722 . - . ID=gene-IXO1104_RS11155;Name=IXO1104_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11155;old_locus_tag=IXO1104_11090;pseudo=true NZ_CP047492.1 Protein Homology CDS 2429548 2431722 . - 0 ID=cds-IXO1104_RS11155;Parent=gene-IXO1104_RS11155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113230.1;locus_tag=IXO1104_RS11155;product=M3 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2431964 2432449 . + . ID=gene-IXO1104_RS11160;Name=IXO1104_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11160;old_locus_tag=IXO1104_11095 NZ_CP047492.1 Protein Homology CDS 2431964 2432449 . + 0 ID=cds-WP_011259009.1;Parent=gene-IXO1104_RS11160;Dbxref=Genbank:WP_011259009.1;Name=WP_011259009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571409.1;locus_tag=IXO1104_RS11160;product=glutathione peroxidase;protein_id=WP_011259009.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2432600 2433379 . - . ID=gene-IXO1104_RS11165;Name=IXO1104_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11165;old_locus_tag=IXO1104_11100 NZ_CP047492.1 Protein Homology CDS 2432600 2433379 . - 0 ID=cds-WP_011408551.1;Parent=gene-IXO1104_RS11165;Dbxref=Genbank:WP_011408551.1;Name=WP_011408551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=IXO1104_RS11165;product=ferredoxin--NADP reductase;protein_id=WP_011408551.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2433568 2435448 . - . ID=gene-IXO1104_RS11170;Name=IXO1104_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11170;old_locus_tag=IXO1104_11105 NZ_CP047492.1 Protein Homology CDS 2433568 2435448 . - 0 ID=cds-WP_012444869.1;Parent=gene-IXO1104_RS11170;Dbxref=Genbank:WP_012444869.1;Name=WP_012444869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911790.1;locus_tag=IXO1104_RS11170;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012444869.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2435782 2437299 . + . ID=gene-IXO1104_RS11175;Name=IXO1104_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11175;old_locus_tag=IXO1104_11110 NZ_CP047492.1 Protein Homology CDS 2435782 2437299 . + 0 ID=cds-WP_011259006.1;Parent=gene-IXO1104_RS11175;Dbxref=Genbank:WP_011259006.1;Name=WP_011259006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=IXO1104_RS11175;product=fumarate hydratase;protein_id=WP_011259006.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2437436 2438070 . + . ID=gene-IXO1104_RS11180;Name=IXO1104_RS11180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11180;old_locus_tag=IXO1104_11120;pseudo=true NZ_CP047492.1 Protein Homology CDS 2437436 2438070 . + 0 ID=cds-IXO1104_RS11180;Parent=gene-IXO1104_RS11180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483541.1;locus_tag=IXO1104_RS11180;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2438361 2438436 . - . ID=gene-IXO1104_RS11185;Name=IXO1104_RS11185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11185;old_locus_tag=IXO1104_11125 NZ_CP047492.1 cmsearch ncRNA 2438361 2438436 . - . ID=rna-IXO1104_RS11185;Parent=gene-IXO1104_RS11185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11185;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2438361 2438436 . - . ID=exon-IXO1104_RS11185-1;Parent=rna-IXO1104_RS11185;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11185;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 2438499 2439550 . - . ID=gene-IXO1104_RS11190;Name=IXO1104_RS11190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11190;old_locus_tag=IXO1104_11130;pseudo=true NZ_CP047492.1 Protein Homology CDS 2438499 2439550 . - 0 ID=cds-IXO1104_RS11190;Parent=gene-IXO1104_RS11190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014324.2;locus_tag=IXO1104_RS11190;product=phospholipase A;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2439993 2440601 . + . ID=gene-IXO1104_RS11195;Name=IXO1104_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11195 NZ_CP047492.1 Protein Homology CDS 2439993 2440601 . + 0 ID=cds-WP_243738046.1;Parent=gene-IXO1104_RS11195;Dbxref=Genbank:WP_243738046.1;Name=WP_243738046.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=IXO1104_RS11195;product=IS630 family transposase;protein_id=WP_243738046.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2440535 2440951 . + . ID=gene-IXO1104_RS11200;Name=IXO1104_RS11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11200;partial=true;pseudo=true;start_range=.,2440535 NZ_CP047492.1 Protein Homology CDS 2440535 2440951 . + 0 ID=cds-IXO1104_RS11200;Parent=gene-IXO1104_RS11200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=IXO1104_RS11200;partial=true;product=transposase;pseudo=true;start_range=.,2440535;transl_table=11 NZ_CP047492.1 RefSeq gene 2441119 2441328 . - . ID=gene-IXO1104_RS11205;Name=IXO1104_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11205 NZ_CP047492.1 Protein Homology CDS 2441119 2441328 . - 0 ID=cds-WP_042464880.1;Parent=gene-IXO1104_RS11205;Dbxref=Genbank:WP_042464880.1;Name=WP_042464880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173638.1;locus_tag=IXO1104_RS11205;product=hypothetical protein;protein_id=WP_042464880.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2441627 2442310 . + . ID=gene-IXO1104_RS11210;Name=IXO1104_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11210 NZ_CP047492.1 GeneMarkS-2+ CDS 2441627 2442310 . + 0 ID=cds-WP_263117925.1;Parent=gene-IXO1104_RS11210;Dbxref=Genbank:WP_263117925.1;Name=WP_263117925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11210;product=hypothetical protein;protein_id=WP_263117925.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2442431 2443018 . + . ID=gene-IXO1104_RS11215;Name=IXO1104_RS11215;end_range=2443018,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11215;old_locus_tag=IXO1104_11150;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2442431 2443018 . + 0 ID=cds-IXO1104_RS11215;Parent=gene-IXO1104_RS11215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2443018,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS11215;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2443074 2444048 . - . ID=gene-IXO1104_RS11220;Name=IXO1104_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11220;old_locus_tag=IXO1104_11155 NZ_CP047492.1 Protein Homology CDS 2443074 2444048 . - 0 ID=cds-WP_011259000.1;Parent=gene-IXO1104_RS11220;Dbxref=Genbank:WP_011259000.1;Name=WP_011259000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503843.1;locus_tag=IXO1104_RS11220;product=GGDEF domain-containing protein;protein_id=WP_011259000.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2444215 2444448 . + . ID=gene-IXO1104_RS11225;Name=IXO1104_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11225;old_locus_tag=IXO1104_11160 NZ_CP047492.1 Protein Homology CDS 2444215 2444448 . + 0 ID=cds-WP_027704049.1;Parent=gene-IXO1104_RS11225;Dbxref=Genbank:WP_027704049.1;Name=WP_027704049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911840.1;locus_tag=IXO1104_RS11225;product=hypothetical protein;protein_id=WP_027704049.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2444645 2446298 . - . ID=gene-IXO1104_RS11230;Name=IXO1104_RS11230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11230;old_locus_tag=IXO1104_11165;pseudo=true NZ_CP047492.1 Protein Homology CDS 2444645 2446298 . - 0 ID=cds-IXO1104_RS11230;Parent=gene-IXO1104_RS11230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380255.1;locus_tag=IXO1104_RS11230;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2446343 2447106 . - . ID=gene-IXO1104_RS11235;Name=IXO1104_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11235;old_locus_tag=IXO1104_11170 NZ_CP047492.1 Protein Homology CDS 2446791 2447106 . - 0 ID=cds-WP_094187715.1-10;Parent=gene-IXO1104_RS11235;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11235;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2446343 2446791 . - 2 ID=cds-WP_094187715.1-10;Parent=gene-IXO1104_RS11235;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11235;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2447191 2448000 . + . ID=gene-IXO1104_RS11240;Name=IXO1104_RS11240;end_range=2448000,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11240;old_locus_tag=IXO1104_11175;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2447191 2448000 . + 0 ID=cds-IXO1104_RS11240;Parent=gene-IXO1104_RS11240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2448000,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444766.1;locus_tag=IXO1104_RS11240;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2448258 2448776 . + . ID=gene-IXO1104_RS11245;Name=IXO1104_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11245;old_locus_tag=IXO1104_11180 NZ_CP047492.1 Protein Homology CDS 2448258 2448776 . + 0 ID=cds-WP_027704112.1;Parent=gene-IXO1104_RS11245;Dbxref=Genbank:WP_027704112.1;Name=WP_027704112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907763.1;locus_tag=IXO1104_RS11245;product=GNAT family N-acetyltransferase;protein_id=WP_027704112.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2448931 2450309 . - . ID=gene-IXO1104_RS11250;Name=IXO1104_RS11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11250;old_locus_tag=IXO1104_11185;pseudo=true NZ_CP047492.1 Protein Homology CDS 2448931 2450309 . - 0 ID=cds-IXO1104_RS11250;Parent=gene-IXO1104_RS11250;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1104_RS11250;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2450512 2451831 . - . ID=gene-IXO1104_RS11255;Name=IXO1104_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11255;old_locus_tag=IXO1104_11190 NZ_CP047492.1 Protein Homology CDS 2450512 2451831 . - 0 ID=cds-WP_263117926.1;Parent=gene-IXO1104_RS11255;Dbxref=Genbank:WP_263117926.1;Name=WP_263117926.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS11255;product=IS701 family transposase;protein_id=WP_263117926.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2451882 2452388 . - . ID=gene-IXO1104_RS11260;Name=IXO1104_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11260;old_locus_tag=IXO1104_11195 NZ_CP047492.1 GeneMarkS-2+ CDS 2451882 2452388 . - 0 ID=cds-WP_128415445.1;Parent=gene-IXO1104_RS11260;Dbxref=Genbank:WP_128415445.1;Name=WP_128415445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11260;product=hypothetical protein;protein_id=WP_128415445.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2452821 2454029 . + . ID=gene-IXO1104_RS11265;Name=IXO1104_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11265;old_locus_tag=IXO1104_11200 NZ_CP047492.1 Protein Homology CDS 2452821 2454029 . + 0 ID=cds-WP_164994128.1;Parent=gene-IXO1104_RS11265;Dbxref=Genbank:WP_164994128.1;Name=WP_164994128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184005.1;locus_tag=IXO1104_RS11265;product=AAA family ATPase;protein_id=WP_164994128.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2454040 2455008 . + . ID=gene-IXO1104_RS11270;Name=IXO1104_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11270;old_locus_tag=IXO1104_11205 NZ_CP047492.1 Protein Homology CDS 2454040 2455008 . + 0 ID=cds-WP_011258529.1-4;Parent=gene-IXO1104_RS11270;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS11270;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2455141 2456301 . + . ID=gene-IXO1104_RS11275;Name=IXO1104_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11275;old_locus_tag=IXO1104_11210 NZ_CP047492.1 GeneMarkS-2+ CDS 2455141 2456301 . + 0 ID=cds-WP_241846847.1;Parent=gene-IXO1104_RS11275;Dbxref=Genbank:WP_241846847.1;Name=WP_241846847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11275;product=hypothetical protein;protein_id=WP_241846847.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2456416 2457384 . - . ID=gene-IXO1104_RS11280;Name=IXO1104_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11280;old_locus_tag=IXO1104_11215 NZ_CP047492.1 Protein Homology CDS 2456416 2457384 . - 0 ID=cds-WP_011258802.1-7;Parent=gene-IXO1104_RS11280;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS11280;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2457453 2458529 . + . ID=gene-IXO1104_RS11285;Name=IXO1104_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11285;old_locus_tag=IXO1104_11220 NZ_CP047492.1 Protein Homology CDS 2457453 2458529 . + 0 ID=cds-WP_241846848.1;Parent=gene-IXO1104_RS11285;Dbxref=Genbank:WP_241846848.1;Name=WP_241846848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=IXO1104_RS11285;product=S8 family serine peptidase;protein_id=WP_241846848.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2458611 2459825 . - . ID=gene-IXO1104_RS11290;Name=IXO1104_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11290;old_locus_tag=IXO1104_11225 NZ_CP047492.1 Protein Homology CDS 2458611 2459825 . - 0 ID=cds-WP_044756833.1;Parent=gene-IXO1104_RS11290;Dbxref=Genbank:WP_044756833.1;Name=WP_044756833.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS11290;product=IS4 family transposase;protein_id=WP_044756833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2460076 2461551 . + . ID=gene-IXO1104_RS11295;Name=IXO1104_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11295;old_locus_tag=IXO1104_11230 NZ_CP047492.1 Protein Homology CDS 2460076 2461551 . + 0 ID=cds-WP_069959772.1-2;Parent=gene-IXO1104_RS11295;Dbxref=Genbank:WP_069959772.1;Name=WP_069959772.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS11295;product=IS5 family transposase;protein_id=WP_069959772.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2461602 2462621 . - . ID=gene-IXO1104_RS11300;Name=IXO1104_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11300;old_locus_tag=IXO1104_11235 NZ_CP047492.1 Protein Homology CDS 2461602 2462621 . - 0 ID=cds-WP_012444885.1;Parent=gene-IXO1104_RS11300;Dbxref=Genbank:WP_012444885.1;Name=WP_012444885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933836.1;locus_tag=IXO1104_RS11300;product=DNA-binding protein;protein_id=WP_012444885.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2462878 2464485 . + . ID=gene-IXO1104_RS11305;Name=IXO1104_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11305;old_locus_tag=IXO1104_11240 NZ_CP047492.1 Protein Homology CDS 2462878 2464485 . + 0 ID=cds-WP_012444886.1;Parent=gene-IXO1104_RS11305;Dbxref=Genbank:WP_012444886.1;Name=WP_012444886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907767.1;locus_tag=IXO1104_RS11305;product=AAA family ATPase;protein_id=WP_012444886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2464463 2464858 . + . ID=gene-IXO1104_RS11310;Name=IXO1104_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11310 NZ_CP047492.1 GeneMarkS-2+ CDS 2464463 2464858 . + 0 ID=cds-WP_229002737.1;Parent=gene-IXO1104_RS11310;Dbxref=Genbank:WP_229002737.1;Name=WP_229002737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11310;product=hypothetical protein;protein_id=WP_229002737.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2464881 2465699 . + . ID=gene-IXO1104_RS11315;Name=IXO1104_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11315 NZ_CP047492.1 Protein Homology CDS 2464881 2465699 . + 0 ID=cds-WP_229002739.1;Parent=gene-IXO1104_RS11315;Dbxref=Genbank:WP_229002739.1;Name=WP_229002739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=IXO1104_RS11315;product=hypothetical protein;protein_id=WP_229002739.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2465696 2466043 . + . ID=gene-IXO1104_RS11320;Name=IXO1104_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11320;old_locus_tag=IXO1104_11250 NZ_CP047492.1 Protein Homology CDS 2465696 2466043 . + 0 ID=cds-WP_027703900.1;Parent=gene-IXO1104_RS11320;Dbxref=Genbank:WP_027703900.1;Name=WP_027703900.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159627.1;locus_tag=IXO1104_RS11320;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_027703900.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2466040 2466570 . + . ID=gene-IXO1104_RS11325;Name=IXO1104_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11325;old_locus_tag=IXO1104_11255 NZ_CP047492.1 Protein Homology CDS 2466040 2466570 . + 0 ID=cds-WP_012444889.1;Parent=gene-IXO1104_RS11325;Dbxref=Genbank:WP_012444889.1;Name=WP_012444889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907770.1;locus_tag=IXO1104_RS11325;product=arsenate reductase ArsC;protein_id=WP_012444889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2466581 2466994 . + . ID=gene-IXO1104_RS11330;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11330;old_locus_tag=IXO1104_11260 NZ_CP047492.1 Protein Homology CDS 2466581 2466994 . + 0 ID=cds-WP_012444890.1;Parent=gene-IXO1104_RS11330;Dbxref=Genbank:WP_012444890.1;Name=WP_012444890.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996623.1;locus_tag=IXO1104_RS11330;product=arsenate reductase (glutaredoxin);protein_id=WP_012444890.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2466991 2467716 . + . ID=gene-IXO1104_RS11335;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=IXO1104_RS11335;old_locus_tag=IXO1104_11265 NZ_CP047492.1 Protein Homology CDS 2466991 2467716 . + 0 ID=cds-WP_012444891.1;Parent=gene-IXO1104_RS11335;Dbxref=Genbank:WP_012444891.1;Name=WP_012444891.1;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444891.1;locus_tag=IXO1104_RS11335;product=arsenical resistance protein ArsH;protein_id=WP_012444891.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2467735 2469039 . + . ID=gene-IXO1104_RS11340;Name=IXO1104_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11340;old_locus_tag=IXO1104_11270 NZ_CP047492.1 Protein Homology CDS 2467735 2469039 . + 0 ID=cds-WP_012444892.1;Parent=gene-IXO1104_RS11340;Dbxref=Genbank:WP_012444892.1;Name=WP_012444892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444892.1;locus_tag=IXO1104_RS11340;product=arsenic transporter;protein_id=WP_012444892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2469303 2469659 . + . ID=gene-IXO1104_RS11345;Name=IXO1104_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11345;old_locus_tag=IXO1104_11275 NZ_CP047492.1 Protein Homology CDS 2469303 2469659 . + 0 ID=cds-WP_026144156.1;Parent=gene-IXO1104_RS11345;Dbxref=Genbank:WP_026144156.1;Name=WP_026144156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012790.2;locus_tag=IXO1104_RS11345;product=rhodanese-like domain-containing protein;protein_id=WP_026144156.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2469677 2470612 . + . ID=gene-IXO1104_RS11350;Name=IXO1104_RS11350;end_range=2470612,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11350;old_locus_tag=IXO1104_11280;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2469677 2470612 . + 0 ID=cds-IXO1104_RS11350;Parent=gene-IXO1104_RS11350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2470612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413373.1;locus_tag=IXO1104_RS11350;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2470655 2473615 . + . ID=gene-IXO1104_RS11355;Name=IXO1104_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11355;old_locus_tag=IXO1104_11285 NZ_CP047492.1 Protein Homology CDS 2470655 2473615 . + 0 ID=cds-WP_012444894.1;Parent=gene-IXO1104_RS11355;Dbxref=Genbank:WP_012444894.1;Name=WP_012444894.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611205.1;locus_tag=IXO1104_RS11355;product=Tn3 family transposase;protein_id=WP_012444894.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2473709 2473936 . + . ID=gene-IXO1104_RS11360;Name=IXO1104_RS11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11360;old_locus_tag=IXO1104_11290;partial=true;pseudo=true;start_range=.,2473709 NZ_CP047492.1 Protein Homology CDS 2473709 2473936 . + 0 ID=cds-IXO1104_RS11360;Parent=gene-IXO1104_RS11360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=IXO1104_RS11360;partial=true;product=transposase;pseudo=true;start_range=.,2473709;transl_table=11 NZ_CP047492.1 RefSeq gene 2474610 2478005 . - . ID=gene-IXO1104_RS11365;Name=IXO1104_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11365;old_locus_tag=IXO1104_11295 NZ_CP047492.1 Protein Homology CDS 2474610 2478005 . - 0 ID=cds-WP_044756830.1;Parent=gene-IXO1104_RS11365;Dbxref=Genbank:WP_044756830.1;Name=WP_044756830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157546.1;locus_tag=IXO1104_RS11365;product=PAS domain S-box protein;protein_id=WP_044756830.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2478220 2478600 . - . ID=gene-IXO1104_RS11370;Name=IXO1104_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11370;old_locus_tag=IXO1104_11300 NZ_CP047492.1 Protein Homology CDS 2478220 2478600 . - 0 ID=cds-WP_011258994.1;Parent=gene-IXO1104_RS11370;Dbxref=Genbank:WP_011258994.1;Name=WP_011258994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258994.1;locus_tag=IXO1104_RS11370;product=response regulator;protein_id=WP_011258994.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2478739 2478825 . + . ID=gene-IXO1104_RS11375;Name=IXO1104_RS11375;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11375;old_locus_tag=IXO1104_11305 NZ_CP047492.1 tRNAscan-SE tRNA 2478739 2478825 . + . ID=rna-IXO1104_RS11375;Parent=gene-IXO1104_RS11375;anticodon=(pos:2478773..2478775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11375;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 2478739 2478825 . + . ID=exon-IXO1104_RS11375-1;Parent=rna-IXO1104_RS11375;anticodon=(pos:2478773..2478775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11375;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 2478868 2479044 . + . ID=gene-IXO1104_RS11380;Name=IXO1104_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11380;old_locus_tag=IXO1104_11310 NZ_CP047492.1 GeneMarkS-2+ CDS 2478868 2479044 . + 0 ID=cds-WP_164994129.1;Parent=gene-IXO1104_RS11380;Dbxref=Genbank:WP_164994129.1;Name=WP_164994129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11380;product=hypothetical protein;protein_id=WP_164994129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2479188 2479619 . + . ID=gene-IXO1104_RS11385;Name=IXO1104_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11385;old_locus_tag=IXO1104_11315 NZ_CP047492.1 Protein Homology CDS 2479188 2479619 . + 0 ID=cds-WP_011408538.1;Parent=gene-IXO1104_RS11385;Dbxref=Genbank:WP_011408538.1;Name=WP_011408538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407513.1;locus_tag=IXO1104_RS11385;product=hypothetical protein;protein_id=WP_011408538.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2479616 2479819 . + . ID=gene-IXO1104_RS11390;Name=IXO1104_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11390;old_locus_tag=IXO1104_11320 NZ_CP047492.1 GeneMarkS-2+ CDS 2479616 2479819 . + 0 ID=cds-WP_027703995.1;Parent=gene-IXO1104_RS11390;Dbxref=Genbank:WP_027703995.1;Name=WP_027703995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11390;product=hypothetical protein;protein_id=WP_027703995.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2479862 2480625 . + . ID=gene-IXO1104_RS11395;Name=IXO1104_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11395;old_locus_tag=IXO1104_11325 NZ_CP047492.1 Protein Homology CDS 2479862 2480177 . + 0 ID=cds-WP_094187736.1-4;Parent=gene-IXO1104_RS11395;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11395;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2480177 2480625 . + 2 ID=cds-WP_094187736.1-4;Parent=gene-IXO1104_RS11395;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11395;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2480659 2482041 . - . ID=gene-IXO1104_RS11400;Name=IXO1104_RS11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11400;old_locus_tag=IXO1104_11330;pseudo=true NZ_CP047492.1 Protein Homology CDS 2480659 2482041 . - 0 ID=cds-IXO1104_RS11400;Parent=gene-IXO1104_RS11400;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS11400;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2482262 2482921 . - . ID=gene-IXO1104_RS11405;Name=IXO1104_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11405;old_locus_tag=IXO1104_11335 NZ_CP047492.1 Protein Homology CDS 2482262 2482921 . - 0 ID=cds-WP_012444902.1;Parent=gene-IXO1104_RS11405;Dbxref=Genbank:WP_012444902.1;Name=WP_012444902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482798.1;locus_tag=IXO1104_RS11405;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_012444902.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2482977 2484893 . - . ID=gene-IXO1104_RS11410;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=IXO1104_RS11410;old_locus_tag=IXO1104_11340 NZ_CP047492.1 Protein Homology CDS 2482977 2484893 . - 0 ID=cds-WP_011258990.1;Parent=gene-IXO1104_RS11410;Dbxref=Genbank:WP_011258990.1;Name=WP_011258990.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472018.1;locus_tag=IXO1104_RS11410;product=phosphogluconate dehydratase;protein_id=WP_011258990.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2484996 2485715 . - . ID=gene-IXO1104_RS11415;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=IXO1104_RS11415;old_locus_tag=IXO1104_11345 NZ_CP047492.1 Protein Homology CDS 2484996 2485715 . - 0 ID=cds-WP_011258989.1;Parent=gene-IXO1104_RS11415;Dbxref=Genbank:WP_011258989.1;Name=WP_011258989.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258989.1;locus_tag=IXO1104_RS11415;product=6-phosphogluconolactonase;protein_id=WP_011258989.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2485712 2486719 . - . ID=gene-IXO1104_RS11420;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=IXO1104_RS11420;old_locus_tag=IXO1104_11350 NZ_CP047492.1 Protein Homology CDS 2485712 2486719 . - 0 ID=cds-WP_011258988.1;Parent=gene-IXO1104_RS11420;Dbxref=Genbank:WP_011258988.1;Name=WP_011258988.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802227.1;locus_tag=IXO1104_RS11420;product=glucokinase;protein_id=WP_011258988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2486716 2488146 . - . ID=gene-IXO1104_RS11425;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=IXO1104_RS11425;old_locus_tag=IXO1104_11355 NZ_CP047492.1 Protein Homology CDS 2486716 2488146 . - 0 ID=cds-WP_011408534.1;Parent=gene-IXO1104_RS11425;Dbxref=Genbank:WP_011408534.1;Name=WP_011408534.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945345.1;locus_tag=IXO1104_RS11425;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011408534.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2488566 2489663 . + . ID=gene-IXO1104_RS11430;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11430;old_locus_tag=IXO1104_11360 NZ_CP047492.1 Protein Homology CDS 2488566 2489663 . + 0 ID=cds-WP_011258986.1;Parent=gene-IXO1104_RS11430;Dbxref=Genbank:WP_011258986.1;Name=WP_011258986.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503506.1;locus_tag=IXO1104_RS11430;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_011258986.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2489713 2489787 . + . ID=gene-IXO1104_RS11435;Name=IXO1104_RS11435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11435;old_locus_tag=IXO1104_11365 NZ_CP047492.1 cmsearch ncRNA 2489713 2489787 . + . ID=rna-IXO1104_RS11435;Parent=gene-IXO1104_RS11435;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11435;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2489713 2489787 . + . ID=exon-IXO1104_RS11435-1;Parent=rna-IXO1104_RS11435;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11435;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2489792 2490664 . - . ID=gene-IXO1104_RS11440;Name=IXO1104_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11440;old_locus_tag=IXO1104_11370 NZ_CP047492.1 Protein Homology CDS 2489792 2490664 . - 0 ID=cds-WP_011408533.1;Parent=gene-IXO1104_RS11440;Dbxref=Genbank:WP_011408533.1;Name=WP_011408533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300222.1;locus_tag=IXO1104_RS11440;product=folate-binding protein YgfZ;protein_id=WP_011408533.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2490566 2490874 . + . ID=gene-IXO1104_RS11445;Name=IXO1104_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11445;old_locus_tag=IXO1104_11375 NZ_CP047492.1 Protein Homology CDS 2490566 2490874 . + 0 ID=cds-WP_228329617.1;Parent=gene-IXO1104_RS11445;Dbxref=Genbank:WP_228329617.1;Name=WP_228329617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090240.1;locus_tag=IXO1104_RS11445;product=DUF1674 domain-containing protein;protein_id=WP_228329617.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2490934 2491329 . + . ID=gene-IXO1104_RS11450;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11450;old_locus_tag=IXO1104_11380 NZ_CP047492.1 Protein Homology CDS 2490934 2491329 . + 0 ID=cds-WP_011258985.1;Parent=gene-IXO1104_RS11450;Dbxref=Genbank:WP_011258985.1;Name=WP_011258985.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090241.1;locus_tag=IXO1104_RS11450;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_011258985.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2491326 2491712 . + . ID=gene-IXO1104_RS11455;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=IXO1104_RS11455;old_locus_tag=IXO1104_11385 NZ_CP047492.1 Protein Homology CDS 2491326 2491712 . + 0 ID=cds-WP_011258984.1;Parent=gene-IXO1104_RS11455;Dbxref=Genbank:WP_011258984.1;Name=WP_011258984.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995651.1;locus_tag=IXO1104_RS11455;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_011258984.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2491747 2493537 . + . ID=gene-IXO1104_RS11460;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=IXO1104_RS11460;old_locus_tag=IXO1104_11390 NZ_CP047492.1 Protein Homology CDS 2491747 2493537 . + 0 ID=cds-WP_012444909.1;Parent=gene-IXO1104_RS11460;Dbxref=Genbank:WP_012444909.1;Name=WP_012444909.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=IXO1104_RS11460;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_012444909.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2493547 2493750 . + . ID=gene-IXO1104_RS11465;Name=IXO1104_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11465;old_locus_tag=IXO1104_11395 NZ_CP047492.1 Protein Homology CDS 2493547 2493750 . + 0 ID=cds-WP_027703324.1;Parent=gene-IXO1104_RS11465;Dbxref=Genbank:WP_027703324.1;Name=WP_027703324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167450.1;locus_tag=IXO1104_RS11465;product=hypothetical protein;protein_id=WP_027703324.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2493767 2494549 . + . ID=gene-IXO1104_RS11470;Name=IXO1104_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11470;old_locus_tag=IXO1104_11400 NZ_CP047492.1 Protein Homology CDS 2493767 2494549 . + 0 ID=cds-WP_011408532.1;Parent=gene-IXO1104_RS11470;Dbxref=Genbank:WP_011408532.1;Name=WP_011408532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037280.1;locus_tag=IXO1104_RS11470;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_011408532.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2494660 2494908 . + . ID=gene-IXO1104_RS11475;Name=IXO1104_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11475;old_locus_tag=IXO1104_11405 NZ_CP047492.1 Protein Homology CDS 2494660 2494908 . + 0 ID=cds-WP_011408531.1;Parent=gene-IXO1104_RS11475;Dbxref=Genbank:WP_011408531.1;Name=WP_011408531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=IXO1104_RS11475;product=succinate dehydrogenase assembly factor 2;protein_id=WP_011408531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2494859 2495311 . + . ID=gene-IXO1104_RS11480;Name=IXO1104_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11480;old_locus_tag=IXO1104_11410 NZ_CP047492.1 Protein Homology CDS 2494859 2495311 . + 0 ID=cds-WP_014503500.1;Parent=gene-IXO1104_RS11480;Dbxref=Genbank:WP_014503500.1;Name=WP_014503500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156610.1;locus_tag=IXO1104_RS11480;product=hypothetical protein;protein_id=WP_014503500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2495335 2496576 . + . ID=gene-IXO1104_RS11485;Name=IXO1104_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11485;old_locus_tag=IXO1104_11415 NZ_CP047492.1 Protein Homology CDS 2495335 2496576 . + 0 ID=cds-WP_010378794.1;Parent=gene-IXO1104_RS11485;Dbxref=Genbank:WP_010378794.1;Name=WP_010378794.1;Ontology_term=GO:0042953,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=IXO1104_RS11485;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_010378794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2496569 2497303 . + . ID=gene-IXO1104_RS11490;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=IXO1104_RS11490;old_locus_tag=IXO1104_11420 NZ_CP047492.1 Protein Homology CDS 2496569 2497303 . + 0 ID=cds-WP_011258980.1;Parent=gene-IXO1104_RS11490;Dbxref=Genbank:WP_011258980.1;Name=WP_011258980.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472015.1;locus_tag=IXO1104_RS11490;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_011258980.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2497476 2498540 . - . ID=gene-IXO1104_RS11495;Name=IXO1104_RS11495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11495;old_locus_tag=IXO1104_11425;pseudo=true NZ_CP047492.1 Protein Homology CDS 2497476 2498540 . - 0 ID=cds-IXO1104_RS11495;Parent=gene-IXO1104_RS11495;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303656.1;locus_tag=IXO1104_RS11495;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2498697 2499662 . - . ID=gene-IXO1104_RS11500;Name=IXO1104_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11500;old_locus_tag=IXO1104_11430 NZ_CP047492.1 Protein Homology CDS 2498697 2499662 . - 0 ID=cds-WP_115862272.1;Parent=gene-IXO1104_RS11500;Dbxref=Genbank:WP_115862272.1;Name=WP_115862272.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS11500;product=IS1595 family transposase;protein_id=WP_115862272.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2499916 2502459 . + . ID=gene-IXO1104_RS11505;Name=IXO1104_RS11505;end_range=2502459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11505;old_locus_tag=IXO1104_11435;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2499916 2502459 . + 0 ID=cds-IXO1104_RS11505;Parent=gene-IXO1104_RS11505;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009290,GO:0005215;end_range=2502459,.;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167829.1;locus_tag=IXO1104_RS11505;partial=true;product=DNA internalization-related competence protein ComEC/Rec2;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2502353 2503015 . + . ID=gene-IXO1104_RS11510;Name=IXO1104_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11510;old_locus_tag=IXO1104_11440 NZ_CP047492.1 Protein Homology CDS 2502353 2503015 . + 0 ID=cds-WP_011408526.1;Parent=gene-IXO1104_RS11510;Dbxref=Genbank:WP_011408526.1;Name=WP_011408526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916730.1;locus_tag=IXO1104_RS11510;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011408526.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2503019 2503483 . + . ID=gene-IXO1104_RS11515;Name=IXO1104_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11515;old_locus_tag=IXO1104_11445 NZ_CP047492.1 Protein Homology CDS 2503019 2503483 . + 0 ID=cds-WP_011258975.1;Parent=gene-IXO1104_RS11515;Dbxref=Genbank:WP_011258975.1;Name=WP_011258975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115686.1;locus_tag=IXO1104_RS11515;product=biopolymer transporter ExbD;protein_id=WP_011258975.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2503480 2505249 . + . ID=gene-IXO1104_RS11520;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=IXO1104_RS11520;old_locus_tag=IXO1104_11450 NZ_CP047492.1 Protein Homology CDS 2503480 2505249 . + 0 ID=cds-WP_011258974.1;Parent=gene-IXO1104_RS11520;Dbxref=Genbank:WP_011258974.1;Name=WP_011258974.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158537.1;locus_tag=IXO1104_RS11520;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_011258974.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2505246 2506286 . + . ID=gene-IXO1104_RS11525;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=IXO1104_RS11525;old_locus_tag=IXO1104_11455 NZ_CP047492.1 Protein Homology CDS 2505246 2506286 . + 0 ID=cds-WP_011258973.1;Parent=gene-IXO1104_RS11525;Dbxref=Genbank:WP_011258973.1;Name=WP_011258973.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449592.1;locus_tag=IXO1104_RS11525;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_011258973.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2506578 2507357 . + . ID=gene-IXO1104_RS11530;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS11530;old_locus_tag=IXO1104_11460 NZ_CP047492.1 Protein Homology CDS 2506578 2507357 . + 0 ID=cds-WP_011258972.1;Parent=gene-IXO1104_RS11530;Dbxref=Genbank:WP_011258972.1;Name=WP_011258972.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373332.1;locus_tag=IXO1104_RS11530;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_011258972.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2507354 2507818 . + . ID=gene-IXO1104_RS11535;Name=IXO1104_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11535;old_locus_tag=IXO1104_11465 NZ_CP047492.1 Protein Homology CDS 2507354 2507818 . + 0 ID=cds-WP_011258971.1;Parent=gene-IXO1104_RS11535;Dbxref=Genbank:WP_011258971.1;Name=WP_011258971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916712.1;locus_tag=IXO1104_RS11535;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_011258971.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2507842 2509260 . + . ID=gene-IXO1104_RS11540;Name=IXO1104_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11540;old_locus_tag=IXO1104_11470 NZ_CP047492.1 Protein Homology CDS 2507842 2509260 . + 0 ID=cds-WP_012444920.1;Parent=gene-IXO1104_RS11540;Dbxref=Genbank:WP_012444920.1;Name=WP_012444920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113177.1;locus_tag=IXO1104_RS11540;product=hypothetical protein;protein_id=WP_012444920.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2509257 2511113 . + . ID=gene-IXO1104_RS11545;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11545;old_locus_tag=IXO1104_11475 NZ_CP047492.1 Protein Homology CDS 2509257 2511113 . + 0 ID=cds-WP_011258969.1;Parent=gene-IXO1104_RS11545;Dbxref=Genbank:WP_011258969.1;Name=WP_011258969.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237626.1;locus_tag=IXO1104_RS11545;product=excinuclease ABC subunit UvrC;protein_id=WP_011258969.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2511113 2511745 . + . ID=gene-IXO1104_RS11550;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS11550;old_locus_tag=IXO1104_11480 NZ_CP047492.1 Protein Homology CDS 2511113 2511745 . + 0 ID=cds-WP_011258968.1;Parent=gene-IXO1104_RS11550;Dbxref=Genbank:WP_011258968.1;Name=WP_011258968.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995682.1;locus_tag=IXO1104_RS11550;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_011258968.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2511782 2511857 . + . ID=gene-IXO1104_RS11555;Name=IXO1104_RS11555;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11555;old_locus_tag=IXO1104_11485 NZ_CP047492.1 tRNAscan-SE tRNA 2511782 2511857 . + . ID=rna-IXO1104_RS11555;Parent=gene-IXO1104_RS11555;anticodon=(pos:2511815..2511817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11555;product=tRNA-Gly NZ_CP047492.1 tRNAscan-SE exon 2511782 2511857 . + . ID=exon-IXO1104_RS11555-1;Parent=rna-IXO1104_RS11555;anticodon=(pos:2511815..2511817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11555;product=tRNA-Gly NZ_CP047492.1 RefSeq gene 2511926 2511999 . + . ID=gene-IXO1104_RS11560;Name=IXO1104_RS11560;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11560;old_locus_tag=IXO1104_11490 NZ_CP047492.1 tRNAscan-SE tRNA 2511926 2511999 . + . ID=rna-IXO1104_RS11560;Parent=gene-IXO1104_RS11560;anticodon=(pos:2511958..2511960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11560;product=tRNA-Cys NZ_CP047492.1 tRNAscan-SE exon 2511926 2511999 . + . ID=exon-IXO1104_RS11560-1;Parent=rna-IXO1104_RS11560;anticodon=(pos:2511958..2511960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11560;product=tRNA-Cys NZ_CP047492.1 RefSeq gene 2512082 2512157 . + . ID=gene-IXO1104_RS11565;Name=IXO1104_RS11565;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11565;old_locus_tag=IXO1104_11495 NZ_CP047492.1 tRNAscan-SE tRNA 2512082 2512157 . + . ID=rna-IXO1104_RS11565;Parent=gene-IXO1104_RS11565;anticodon=(pos:2512115..2512117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11565;product=tRNA-Gly NZ_CP047492.1 tRNAscan-SE exon 2512082 2512157 . + . ID=exon-IXO1104_RS11565-1;Parent=rna-IXO1104_RS11565;anticodon=(pos:2512115..2512117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11565;product=tRNA-Gly NZ_CP047492.1 RefSeq gene 2512220 2512726 . - . ID=gene-IXO1104_RS11570;Name=IXO1104_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11570;old_locus_tag=IXO1104_11500 NZ_CP047492.1 Protein Homology CDS 2512220 2512726 . - 0 ID=cds-WP_012444921.1;Parent=gene-IXO1104_RS11570;Dbxref=Genbank:WP_012444921.1;Name=WP_012444921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444921.1;locus_tag=IXO1104_RS11570;product=VOC family protein;protein_id=WP_012444921.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2512893 2513756 . - . ID=gene-IXO1104_RS11575;Name=IXO1104_RS11575;end_range=2513756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11575;old_locus_tag=IXO1104_11505;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2512893 2513756 . - 0 ID=cds-IXO1104_RS11575;Parent=gene-IXO1104_RS11575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2513756,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS11575;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2513843 2514754 . + . ID=gene-IXO1104_RS11580;Name=IXO1104_RS11580;end_range=2514754,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11580;old_locus_tag=IXO1104_11510;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2513843 2514754 . + 0 ID=cds-IXO1104_RS11580;Parent=gene-IXO1104_RS11580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2514754,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS11580;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2514844 2515800 . + . ID=gene-IXO1104_RS11585;Name=IXO1104_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11585;old_locus_tag=IXO1104_11515 NZ_CP047492.1 Protein Homology CDS 2514844 2515800 . + 0 ID=cds-WP_164994130.1;Parent=gene-IXO1104_RS11585;Dbxref=Genbank:WP_164994130.1;Name=WP_164994130.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS11585;product=IS30 family transposase;protein_id=WP_164994130.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2516246 2516824 . - . ID=gene-IXO1104_RS11590;Name=IXO1104_RS11590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11590;old_locus_tag=IXO1104_11520;partial=true;pseudo=true;start_range=.,2516246 NZ_CP047492.1 Protein Homology CDS 2516246 2516824 . - 0 ID=cds-IXO1104_RS11590;Parent=gene-IXO1104_RS11590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS11590;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,2516246;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2516918 2517825 . - . ID=gene-IXO1104_RS11595;Name=IXO1104_RS11595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11595;partial=true;pseudo=true;start_range=.,2516918 NZ_CP047492.1 Protein Homology CDS 2516918 2517825 . - 0 ID=cds-IXO1104_RS11595;Parent=gene-IXO1104_RS11595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612052.1;locus_tag=IXO1104_RS11595;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2516918;transl_table=11 NZ_CP047492.1 RefSeq gene 2517920 2521942 . - . ID=gene-IXO1104_RS11600;Name=IXO1104_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11600;old_locus_tag=IXO1104_11535 NZ_CP047492.1 Protein Homology CDS 2517920 2521942 . - 0 ID=cds-WP_263117927.1;Parent=gene-IXO1104_RS11600;Dbxref=Genbank:WP_263117927.1;Name=WP_263117927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS11600;product=avirulence protein;protein_id=WP_263117927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2522167 2522466 . - . ID=gene-IXO1104_RS11605;Name=IXO1104_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11605;old_locus_tag=IXO1104_11540 NZ_CP047492.1 Protein Homology CDS 2522167 2522466 . - 0 ID=cds-WP_011408491.1-2;Parent=gene-IXO1104_RS11605;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS11605;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2522470 2522664 . - . ID=gene-IXO1104_RS11610;Name=IXO1104_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11610;old_locus_tag=IXO1104_11545 NZ_CP047492.1 GeneMarkS-2+ CDS 2522470 2522664 . - 0 ID=cds-WP_012444931.1;Parent=gene-IXO1104_RS11610;Dbxref=Genbank:WP_012444931.1;Name=WP_012444931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11610;product=hypothetical protein;protein_id=WP_012444931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2522895 2523657 . - . ID=gene-IXO1104_RS11615;Name=IXO1104_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11615;old_locus_tag=IXO1104_11555 NZ_CP047492.1 Protein Homology CDS 2523338 2523657 . - 0 ID=cds-WP_109181916.1;Parent=gene-IXO1104_RS11615;Dbxref=Genbank:WP_109181916.1;Name=WP_109181916.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11615;product=IS5 family transposase;protein_id=WP_109181916.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2522895 2523339 . - 1 ID=cds-WP_109181916.1;Parent=gene-IXO1104_RS11615;Dbxref=Genbank:WP_109181916.1;Name=WP_109181916.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11615;product=IS5 family transposase;protein_id=WP_109181916.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2523747 2527535 . - . ID=gene-IXO1104_RS11620;Name=IXO1104_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11620;old_locus_tag=IXO1104_11560 NZ_CP047492.1 Protein Homology CDS 2523747 2527535 . - 0 ID=cds-WP_164994131.1;Parent=gene-IXO1104_RS11620;Dbxref=Genbank:WP_164994131.1;Name=WP_164994131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS11620;product=TAL effector repeat-containing protein;protein_id=WP_164994131.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2528065 2528541 . - . ID=gene-IXO1104_RS11625;Name=IXO1104_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11625 NZ_CP047492.1 GeneMarkS-2+ CDS 2528065 2528541 . - 0 ID=cds-WP_230455392.1;Parent=gene-IXO1104_RS11625;Dbxref=Genbank:WP_230455392.1;Name=WP_230455392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11625;product=DUF4990 domain-containing protein;protein_id=WP_230455392.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2529738 2529923 . + . ID=gene-IXO1104_RS11630;Name=IXO1104_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11630;old_locus_tag=IXO1104_11575 NZ_CP047492.1 Protein Homology CDS 2529738 2529923 . + 0 ID=cds-WP_041182117.1;Parent=gene-IXO1104_RS11630;Dbxref=Genbank:WP_041182117.1;Name=WP_041182117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408509.1;locus_tag=IXO1104_RS11630;product=hypothetical protein;protein_id=WP_041182117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2529923 2530126 . + . ID=gene-IXO1104_RS11635;Name=IXO1104_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11635;old_locus_tag=IXO1104_11580 NZ_CP047492.1 Protein Homology CDS 2529923 2530126 . + 0 ID=cds-WP_012444935.1;Parent=gene-IXO1104_RS11635;Dbxref=Genbank:WP_012444935.1;Name=WP_012444935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408508.1;locus_tag=IXO1104_RS11635;product=hypothetical protein;protein_id=WP_012444935.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2530421 2531335 . + . ID=gene-IXO1104_RS11640;Name=IXO1104_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11640;old_locus_tag=IXO1104_11585 NZ_CP047492.1 Protein Homology CDS 2530421 2531335 . + 0 ID=cds-WP_012444936.1;Parent=gene-IXO1104_RS11640;Dbxref=Genbank:WP_012444936.1;Name=WP_012444936.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258952.1;locus_tag=IXO1104_RS11640;product=replication initiation factor domain-containing protein;protein_id=WP_012444936.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2531440 2531739 . + . ID=gene-IXO1104_RS11645;Name=IXO1104_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11645;old_locus_tag=IXO1104_11590 NZ_CP047492.1 Protein Homology CDS 2531440 2531739 . + 0 ID=cds-WP_011408494.1;Parent=gene-IXO1104_RS11645;Dbxref=Genbank:WP_011408494.1;Name=WP_011408494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408494.1;locus_tag=IXO1104_RS11645;product=single-stranded DNA-binding protein;protein_id=WP_011408494.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2532103 2532342 . + . ID=gene-IXO1104_RS11650;Name=IXO1104_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11650;old_locus_tag=IXO1104_11595 NZ_CP047492.1 Protein Homology CDS 2532103 2532342 . + 0 ID=cds-WP_011408495.1;Parent=gene-IXO1104_RS11650;Dbxref=Genbank:WP_011408495.1;Name=WP_011408495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490393.1;locus_tag=IXO1104_RS11650;product=hypothetical protein;protein_id=WP_011408495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2532704 2533933 . + . ID=gene-IXO1104_RS11655;Name=IXO1104_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11655;old_locus_tag=IXO1104_11600 NZ_CP047492.1 Protein Homology CDS 2532704 2533933 . + 0 ID=cds-WP_228329623.1;Parent=gene-IXO1104_RS11655;Dbxref=Genbank:WP_228329623.1;Name=WP_228329623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490395.1;locus_tag=IXO1104_RS11655;product=hypothetical protein;protein_id=WP_228329623.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2534034 2535353 . + . ID=gene-IXO1104_RS11660;Name=IXO1104_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11660;old_locus_tag=IXO1104_11605 NZ_CP047492.1 Protein Homology CDS 2534034 2535353 . + 0 ID=cds-WP_263117928.1;Parent=gene-IXO1104_RS11660;Dbxref=Genbank:WP_263117928.1;Name=WP_263117928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS11660;product=IS701 family transposase;protein_id=WP_263117928.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2535454 2535732 . + . ID=gene-IXO1104_RS11665;Name=IXO1104_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11665;old_locus_tag=IXO1104_11610 NZ_CP047492.1 Protein Homology CDS 2535454 2535732 . + 0 ID=cds-WP_075240566.1;Parent=gene-IXO1104_RS11665;Dbxref=Genbank:WP_075240566.1;Name=WP_075240566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022194.2;locus_tag=IXO1104_RS11665;product=DUF2523 family protein;protein_id=WP_075240566.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2535729 2536913 . + . ID=gene-IXO1104_RS11670;Name=IXO1104_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11670;old_locus_tag=IXO1104_11615 NZ_CP047492.1 Protein Homology CDS 2535729 2536913 . + 0 ID=cds-WP_011258954.1;Parent=gene-IXO1104_RS11670;Dbxref=Genbank:WP_011258954.1;Name=WP_011258954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490399.1;locus_tag=IXO1104_RS11670;product=hypothetical protein;protein_id=WP_011258954.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2536968 2537138 . + . ID=gene-IXO1104_RS11675;Name=IXO1104_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11675;old_locus_tag=IXO1104_11620 NZ_CP047492.1 Protein Homology CDS 2536968 2537138 . + 0 ID=cds-WP_080493496.1;Parent=gene-IXO1104_RS11675;Dbxref=Genbank:WP_080493496.1;Name=WP_080493496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.2;locus_tag=IXO1104_RS11675;product=TraX family protein;protein_id=WP_080493496.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2538247 2538507 . - . ID=gene-IXO1104_RS11680;Name=IXO1104_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11680;old_locus_tag=IXO1104_11625 NZ_CP047492.1 GeneMarkS-2+ CDS 2538247 2538507 . - 0 ID=cds-WP_075240059.1;Parent=gene-IXO1104_RS11680;Dbxref=Genbank:WP_075240059.1;Name=WP_075240059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11680;product=DUF3653 domain-containing protein;protein_id=WP_075240059.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2538987 2539169 . - . ID=gene-IXO1104_RS11685;Name=IXO1104_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11685;old_locus_tag=IXO1104_11630 NZ_CP047492.1 Protein Homology CDS 2538987 2539169 . - 0 ID=cds-WP_011408511.1;Parent=gene-IXO1104_RS11685;Dbxref=Genbank:WP_011408511.1;Name=WP_011408511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408511.1;locus_tag=IXO1104_RS11685;product=hypothetical protein;protein_id=WP_011408511.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2539291 2539602 . - . ID=gene-IXO1104_RS11690;Name=IXO1104_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11690;old_locus_tag=IXO1104_11635 NZ_CP047492.1 GeneMarkS-2+ CDS 2539291 2539602 . - 0 ID=cds-WP_125168751.1;Parent=gene-IXO1104_RS11690;Dbxref=Genbank:WP_125168751.1;Name=WP_125168751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11690;product=hypothetical protein;protein_id=WP_125168751.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2539636 2540381 . - . ID=gene-IXO1104_RS11695;Name=IXO1104_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11695;old_locus_tag=IXO1104_11640 NZ_CP047492.1 Protein Homology CDS 2540084 2540381 . - 0 ID=cds-WP_094187742.1;Parent=gene-IXO1104_RS11695;Dbxref=Genbank:WP_094187742.1;Name=WP_094187742.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11695;product=IS5 family transposase;protein_id=WP_094187742.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2539636 2540084 . - 2 ID=cds-WP_094187742.1;Parent=gene-IXO1104_RS11695;Dbxref=Genbank:WP_094187742.1;Name=WP_094187742.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS11695;product=IS5 family transposase;protein_id=WP_094187742.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2540382 2541338 . - . ID=gene-IXO1104_RS11700;Name=IXO1104_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11700;old_locus_tag=IXO1104_11645 NZ_CP047492.1 Protein Homology CDS 2540382 2541338 . - 0 ID=cds-WP_041182545.1-6;Parent=gene-IXO1104_RS11700;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS11700;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2541723 2542448 . + . ID=gene-IXO1104_RS11705;Name=IXO1104_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11705;old_locus_tag=IXO1104_11650 NZ_CP047492.1 Protein Homology CDS 2541723 2542448 . + 0 ID=cds-WP_012444939.1;Parent=gene-IXO1104_RS11705;Dbxref=Genbank:WP_012444939.1;Name=WP_012444939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238213.1;locus_tag=IXO1104_RS11705;product=hypothetical protein;protein_id=WP_012444939.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2542438 2544303 . + . ID=gene-IXO1104_RS11710;Name=IXO1104_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11710;old_locus_tag=IXO1104_11655 NZ_CP047492.1 Protein Homology CDS 2542438 2544303 . + 0 ID=cds-WP_033013458.1;Parent=gene-IXO1104_RS11710;Dbxref=Genbank:WP_033013458.1;Name=WP_033013458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238212.1;locus_tag=IXO1104_RS11710;product=hypothetical protein;protein_id=WP_033013458.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2544350 2545333 . + . ID=gene-IXO1104_RS11715;Name=IXO1104_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11715;old_locus_tag=IXO1104_11660 NZ_CP047492.1 Protein Homology CDS 2544350 2545333 . + 0 ID=cds-WP_069960343.1;Parent=gene-IXO1104_RS11715;Dbxref=Genbank:WP_069960343.1;Name=WP_069960343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238211.1;locus_tag=IXO1104_RS11715;product=Type II secretory pathway%2C component ExeA;protein_id=WP_069960343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2545870 2546796 . + . ID=gene-IXO1104_RS11720;Name=IXO1104_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11720;old_locus_tag=IXO1104_11665 NZ_CP047492.1 GeneMarkS-2+ CDS 2545870 2546796 . + 0 ID=cds-WP_113022320.1;Parent=gene-IXO1104_RS11720;Dbxref=Genbank:WP_113022320.1;Name=WP_113022320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11720;product=hypothetical protein;protein_id=WP_113022320.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2547003 2547200 . + . ID=gene-IXO1104_RS11725;Name=IXO1104_RS11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11725;old_locus_tag=IXO1104_11670;partial=true;pseudo=true;start_range=.,2547003 NZ_CP047492.1 Protein Homology CDS 2547003 2547200 . + 0 ID=cds-IXO1104_RS11725;Parent=gene-IXO1104_RS11725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS11725;partial=true;product=transposase;pseudo=true;start_range=.,2547003;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2547394 2548280 . - . ID=gene-IXO1104_RS11730;Name=IXO1104_RS11730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11730;old_locus_tag=IXO1104_11675;pseudo=true NZ_CP047492.1 Protein Homology CDS 2547394 2548280 . - 0 ID=cds-IXO1104_RS11730;Parent=gene-IXO1104_RS11730;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS11730;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2548375 2548788 . + . ID=gene-IXO1104_RS11735;Name=IXO1104_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11735;old_locus_tag=IXO1104_11680 NZ_CP047492.1 Protein Homology CDS 2548375 2548788 . + 0 ID=cds-WP_229002750.1;Parent=gene-IXO1104_RS11735;Dbxref=Genbank:WP_229002750.1;Name=WP_229002750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=IXO1104_RS11735;product=site-specific integrase;protein_id=WP_229002750.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2548839 2550165 . + . ID=gene-IXO1104_RS11740;Name=IXO1104_RS11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11740;old_locus_tag=IXO1104_11685;pseudo=true NZ_CP047492.1 Protein Homology CDS 2548839 2550165 . + 0 ID=cds-IXO1104_RS11740;Parent=gene-IXO1104_RS11740;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1104_RS11740;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2550216 2553929 . + . ID=gene-IXO1104_RS11745;Name=IXO1104_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11745;old_locus_tag=IXO1104_11690 NZ_CP047492.1 Protein Homology CDS 2550216 2553929 . + 0 ID=cds-WP_011408518.1;Parent=gene-IXO1104_RS11745;Dbxref=Genbank:WP_011408518.1;Name=WP_011408518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS11745;product=TAL effector repeat-containing protein;protein_id=WP_011408518.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2554198 2554392 . + . ID=gene-IXO1104_RS11750;Name=IXO1104_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11750;old_locus_tag=IXO1104_11695 NZ_CP047492.1 GeneMarkS-2+ CDS 2554198 2554392 . + 0 ID=cds-WP_012444931.1-2;Parent=gene-IXO1104_RS11750;Dbxref=Genbank:WP_012444931.1;Name=WP_012444931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS11750;product=hypothetical protein;protein_id=WP_012444931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2554396 2554695 . + . ID=gene-IXO1104_RS11755;Name=IXO1104_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11755;old_locus_tag=IXO1104_11700 NZ_CP047492.1 Protein Homology CDS 2554396 2554695 . + 0 ID=cds-WP_011408491.1-3;Parent=gene-IXO1104_RS11755;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS11755;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2554919 2558776 . + . ID=gene-IXO1104_RS11760;Name=IXO1104_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11760;old_locus_tag=IXO1104_11705 NZ_CP047492.1 Protein Homology CDS 2554919 2558776 . + 0 ID=cds-WP_263117713.1;Parent=gene-IXO1104_RS11760;Dbxref=Genbank:WP_263117713.1;Name=WP_263117713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS11760;product=avirulence protein;protein_id=WP_263117713.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2558869 2559192 . - . ID=gene-IXO1104_RS11765;Name=IXO1104_RS11765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11765;old_locus_tag=IXO1104_11710;partial=true;pseudo=true;start_range=.,2558869 NZ_CP047492.1 Protein Homology CDS 2558869 2559192 . - 0 ID=cds-IXO1104_RS11765;Parent=gene-IXO1104_RS11765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=IXO1104_RS11765;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2558869;transl_table=11 NZ_CP047492.1 RefSeq gene 2559362 2559982 . - . ID=gene-IXO1104_RS11770;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=IXO1104_RS11770;old_locus_tag=IXO1104_11715 NZ_CP047492.1 Protein Homology CDS 2559362 2559982 . - 0 ID=cds-WP_011258948.1;Parent=gene-IXO1104_RS11770;Dbxref=Genbank:WP_011258948.1;Name=WP_011258948.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507577.1;locus_tag=IXO1104_RS11770;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_011258948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2559972 2560748 . - . ID=gene-IXO1104_RS11775;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=IXO1104_RS11775;old_locus_tag=IXO1104_11720 NZ_CP047492.1 Protein Homology CDS 2559972 2560748 . - 0 ID=cds-WP_011258947.1;Parent=gene-IXO1104_RS11775;Dbxref=Genbank:WP_011258947.1;Name=WP_011258947.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503177.1;locus_tag=IXO1104_RS11775;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_011258947.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2560742 2561476 . - . ID=gene-IXO1104_RS11780;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=IXO1104_RS11780;old_locus_tag=IXO1104_11725 NZ_CP047492.1 Protein Homology CDS 2560742 2561476 . - 0 ID=cds-WP_011258946.1;Parent=gene-IXO1104_RS11780;Dbxref=Genbank:WP_011258946.1;Name=WP_011258946.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155313.1;locus_tag=IXO1104_RS11780;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_011258946.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2561473 2562075 . - . ID=gene-IXO1104_RS11785;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=IXO1104_RS11785;old_locus_tag=IXO1104_11730 NZ_CP047492.1 Protein Homology CDS 2561473 2562075 . - 0 ID=cds-WP_011258945.1;Parent=gene-IXO1104_RS11785;Dbxref=Genbank:WP_011258945.1;Name=WP_011258945.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302508.1;locus_tag=IXO1104_RS11785;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_011258945.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2562072 2563199 . - . ID=gene-IXO1104_RS11790;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=IXO1104_RS11790;old_locus_tag=IXO1104_11735 NZ_CP047492.1 Protein Homology CDS 2562072 2563199 . - 0 ID=cds-WP_011258944.1;Parent=gene-IXO1104_RS11790;Dbxref=Genbank:WP_011258944.1;Name=WP_011258944.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571443.1;locus_tag=IXO1104_RS11790;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_011258944.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2563196 2564287 . - . ID=gene-IXO1104_RS11795;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11795;old_locus_tag=IXO1104_11740 NZ_CP047492.1 Protein Homology CDS 2563196 2564287 . - 0 ID=cds-WP_027703958.1;Parent=gene-IXO1104_RS11795;Dbxref=Genbank:WP_027703958.1;Name=WP_027703958.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090046.1;locus_tag=IXO1104_RS11795;product=histidinol-phosphate transaminase;protein_id=WP_027703958.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2564284 2565579 . - . ID=gene-IXO1104_RS11800;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=IXO1104_RS11800;old_locus_tag=IXO1104_11745 NZ_CP047492.1 Protein Homology CDS 2564284 2565579 . - 0 ID=cds-WP_011258942.1;Parent=gene-IXO1104_RS11800;Dbxref=Genbank:WP_011258942.1;Name=WP_011258942.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347185.1;locus_tag=IXO1104_RS11800;product=histidinol dehydrogenase;protein_id=WP_011258942.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2565576 2566490 . - . ID=gene-IXO1104_RS11805;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=IXO1104_RS11805;old_locus_tag=IXO1104_11750 NZ_CP047492.1 Protein Homology CDS 2565576 2566490 . - 0 ID=cds-WP_011258941.1;Parent=gene-IXO1104_RS11805;Dbxref=Genbank:WP_011258941.1;Name=WP_011258941.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237692.1;locus_tag=IXO1104_RS11805;product=ATP phosphoribosyltransferase;protein_id=WP_011258941.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2566500 2566826 . - . ID=gene-IXO1104_RS11810;Name=IXO1104_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11810;old_locus_tag=IXO1104_11755 NZ_CP047492.1 Protein Homology CDS 2566500 2566826 . - 0 ID=cds-WP_011258940.1;Parent=gene-IXO1104_RS11810;Dbxref=Genbank:WP_011258940.1;Name=WP_011258940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155319.1;locus_tag=IXO1104_RS11810;product=YerC/YecD family TrpR-related protein;protein_id=WP_011258940.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2567140 2567409 . + . ID=gene-IXO1104_RS11815;Name=IXO1104_RS11815;end_range=2567409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11815;old_locus_tag=IXO1104_11760;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2567140 2567409 . + 0 ID=cds-IXO1104_RS11815;Parent=gene-IXO1104_RS11815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2567409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS11815;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2567472 2568707 . + . ID=gene-IXO1104_RS11820;Name=IXO1104_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11820;old_locus_tag=IXO1104_11765 NZ_CP047492.1 Protein Homology CDS 2567472 2568707 . + 0 ID=cds-WP_011257570.1-2;Parent=gene-IXO1104_RS11820;Dbxref=Genbank:WP_011257570.1;Name=WP_011257570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS11820;product=ISL3 family transposase;protein_id=WP_011257570.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2568713 2569258 . + . ID=gene-IXO1104_RS11825;Name=IXO1104_RS11825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11825;old_locus_tag=IXO1104_11770;partial=true;pseudo=true;start_range=.,2568713 NZ_CP047492.1 Protein Homology CDS 2568713 2569258 . + 0 ID=cds-IXO1104_RS11825;Parent=gene-IXO1104_RS11825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS11825;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2568713;transl_table=11 NZ_CP047492.1 RefSeq gene 2569274 2569350 . - . ID=gene-IXO1104_RS11830;Name=IXO1104_RS11830;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11830;old_locus_tag=IXO1104_11775 NZ_CP047492.1 cmsearch ncRNA 2569274 2569350 . - . ID=rna-IXO1104_RS11830;Parent=gene-IXO1104_RS11830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11830;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2569274 2569350 . - . ID=exon-IXO1104_RS11830-1;Parent=rna-IXO1104_RS11830;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11830;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2569764 2571176 . - . ID=gene-IXO1104_RS11835;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=IXO1104_RS11835;old_locus_tag=IXO1104_11780 NZ_CP047492.1 Protein Homology CDS 2569764 2571176 . - 0 ID=cds-WP_012444952.1;Parent=gene-IXO1104_RS11835;Dbxref=Genbank:WP_012444952.1;Name=WP_012444952.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155320.1;locus_tag=IXO1104_RS11835;product=histidine--tRNA ligase;protein_id=WP_012444952.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2571374 2572042 . + . ID=gene-IXO1104_RS11840;Name=IXO1104_RS11840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11840;old_locus_tag=IXO1104_11790;pseudo=true NZ_CP047492.1 Protein Homology CDS 2571374 2572042 . + 0 ID=cds-IXO1104_RS11840;Parent=gene-IXO1104_RS11840;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159460.1;locus_tag=IXO1104_RS11840;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2572441 2573184 . - . ID=gene-IXO1104_RS11845;Name=IXO1104_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11845;old_locus_tag=IXO1104_11795 NZ_CP047492.1 Protein Homology CDS 2572441 2573184 . - 0 ID=cds-WP_027703964.1;Parent=gene-IXO1104_RS11845;Dbxref=Genbank:WP_027703964.1;Name=WP_027703964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155322.1;locus_tag=IXO1104_RS11845;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=WP_027703964.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2573287 2574591 . - . ID=gene-IXO1104_RS11850;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=IXO1104_RS11850;old_locus_tag=IXO1104_11800 NZ_CP047492.1 Protein Homology CDS 2573287 2574591 . - 0 ID=cds-WP_011258935.1;Parent=gene-IXO1104_RS11850;Dbxref=Genbank:WP_011258935.1;Name=WP_011258935.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915357.1;locus_tag=IXO1104_RS11850;product=threonine synthase;protein_id=WP_011258935.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2574753 2575067 . + . ID=gene-IXO1104_RS11855;Name=IXO1104_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11855;old_locus_tag=IXO1104_11805 NZ_CP047492.1 Protein Homology CDS 2574753 2575067 . + 0 ID=cds-WP_024710669.1;Parent=gene-IXO1104_RS11855;Dbxref=Genbank:WP_024710669.1;Name=WP_024710669.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155324.1;locus_tag=IXO1104_RS11855;product=EthD family reductase;protein_id=WP_024710669.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2575791 2577445 . - . ID=gene-IXO1104_RS11860;Name=IXO1104_RS11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11860;old_locus_tag=IXO1104_11810;pseudo=true NZ_CP047492.1 Protein Homology CDS 2575791 2577445 . - 0 ID=cds-IXO1104_RS11860;Parent=gene-IXO1104_RS11860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155325.1;locus_tag=IXO1104_RS11860;product=tannase/feruloyl esterase family alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2578003 2578971 . - . ID=gene-IXO1104_RS11865;Name=IXO1104_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11865;old_locus_tag=IXO1104_11815 NZ_CP047492.1 Protein Homology CDS 2578003 2578971 . - 0 ID=cds-WP_011258933.1;Parent=gene-IXO1104_RS11865;Dbxref=Genbank:WP_011258933.1;Name=WP_011258933.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258933.1;locus_tag=IXO1104_RS11865;product=homoserine kinase;protein_id=WP_011258933.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2578968 2581475 . - . ID=gene-IXO1104_RS11870;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=IXO1104_RS11870;old_locus_tag=IXO1104_11820 NZ_CP047492.1 Protein Homology CDS 2578968 2581475 . - 0 ID=cds-WP_011408482.1;Parent=gene-IXO1104_RS11870;Dbxref=Genbank:WP_011408482.1;Name=WP_011408482.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113111.1;locus_tag=IXO1104_RS11870;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_011408482.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2582068 2582513 . - . ID=gene-IXO1104_RS11875;Name=IXO1104_RS11875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11875;old_locus_tag=IXO1104_11830;pseudo=true NZ_CP047492.1 Protein Homology CDS 2582068 2582513 . - 0 ID=cds-IXO1104_RS11875;Parent=gene-IXO1104_RS11875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115243.1;locus_tag=IXO1104_RS11875;product=tryptophan-rich sensory protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2582567 2582643 . - . ID=gene-IXO1104_RS11880;Name=IXO1104_RS11880;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS11880;old_locus_tag=IXO1104_11835 NZ_CP047492.1 tRNAscan-SE tRNA 2582567 2582643 . - . ID=rna-IXO1104_RS11880;Parent=gene-IXO1104_RS11880;anticodon=(pos:complement(2582607..2582609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11880;product=tRNA-Arg NZ_CP047492.1 tRNAscan-SE exon 2582567 2582643 . - . ID=exon-IXO1104_RS11880-1;Parent=rna-IXO1104_RS11880;anticodon=(pos:complement(2582607..2582609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS11880;product=tRNA-Arg NZ_CP047492.1 RefSeq gene 2582778 2584310 . + . ID=gene-IXO1104_RS11885;Name=IXO1104_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11885;old_locus_tag=IXO1104_11840 NZ_CP047492.1 Protein Homology CDS 2582778 2584310 . + 0 ID=cds-WP_044756815.1;Parent=gene-IXO1104_RS11885;Dbxref=Genbank:WP_044756815.1;Name=WP_044756815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507550.1;locus_tag=IXO1104_RS11885;product=aldehyde dehydrogenase family protein;protein_id=WP_044756815.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2584583 2584663 . + . ID=gene-IXO1104_RS11890;Name=IXO1104_RS11890;end_range=2584663,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11890;partial=true;pseudo=true;start_range=.,2584583 NZ_CP047492.1 Protein Homology CDS 2584583 2584663 . + 0 ID=cds-IXO1104_RS11890;Parent=gene-IXO1104_RS11890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2584663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346878.1;locus_tag=IXO1104_RS11890;partial=true;product=DUF885 domain-containing protein;pseudo=true;start_range=.,2584583;transl_table=11 NZ_CP047492.1 RefSeq gene 2584899 2585183 . + . ID=gene-IXO1104_RS11895;Name=IXO1104_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11895;old_locus_tag=IXO1104_11845 NZ_CP047492.1 Protein Homology CDS 2584899 2585183 . + 0 ID=cds-WP_011408481.1;Parent=gene-IXO1104_RS11895;Dbxref=Genbank:WP_011408481.1;Name=WP_011408481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916283.1;locus_tag=IXO1104_RS11895;product=DUF4190 domain-containing protein;protein_id=WP_011408481.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2585186 2585953 . + . ID=gene-IXO1104_RS11900;Name=IXO1104_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11900;old_locus_tag=IXO1104_11850 NZ_CP047492.1 Protein Homology CDS 2585186 2585953 . + 0 ID=cds-WP_164994133.1;Parent=gene-IXO1104_RS11900;Dbxref=Genbank:WP_164994133.1;Name=WP_164994133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472255.1;locus_tag=IXO1104_RS11900;product=class I SAM-dependent methyltransferase;protein_id=WP_164994133.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2585959 2587014 . + . ID=gene-IXO1104_RS11905;Name=IXO1104_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11905;old_locus_tag=IXO1104_11855 NZ_CP047492.1 Protein Homology CDS 2585959 2587014 . + 0 ID=cds-WP_011258927.1;Parent=gene-IXO1104_RS11905;Dbxref=Genbank:WP_011258927.1;Name=WP_011258927.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090028.1;locus_tag=IXO1104_RS11905;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_011258927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2587011 2588063 . + . ID=gene-IXO1104_RS11910;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=IXO1104_RS11910;old_locus_tag=IXO1104_11860 NZ_CP047492.1 Protein Homology CDS 2587011 2588063 . + 0 ID=cds-WP_011408479.1;Parent=gene-IXO1104_RS11910;Dbxref=Genbank:WP_011408479.1;Name=WP_011408479.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503151.1;locus_tag=IXO1104_RS11910;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_011408479.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2588057 2588968 . + . ID=gene-IXO1104_RS11915;Name=IXO1104_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11915;old_locus_tag=IXO1104_11865 NZ_CP047492.1 Protein Homology CDS 2588057 2588968 . + 0 ID=cds-WP_012444967.1;Parent=gene-IXO1104_RS11915;Dbxref=Genbank:WP_012444967.1;Name=WP_012444967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813681.1;locus_tag=IXO1104_RS11915;product=DMT family transporter;protein_id=WP_012444967.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2589107 2589281 . + . ID=gene-IXO1104_RS11920;Name=IXO1104_RS11920;end_range=2589281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11920;old_locus_tag=IXO1104_11870;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2589107 2589281 . + 0 ID=cds-IXO1104_RS11920;Parent=gene-IXO1104_RS11920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2589281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851273.1;locus_tag=IXO1104_RS11920;partial=true;product=aspartate/glutamate racemase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2589853 2590809 . - . ID=gene-IXO1104_RS11925;Name=IXO1104_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11925;old_locus_tag=IXO1104_11880 NZ_CP047492.1 Protein Homology CDS 2589853 2590809 . - 0 ID=cds-WP_041182545.1-7;Parent=gene-IXO1104_RS11925;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS11925;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2590901 2592070 . + . ID=gene-IXO1104_RS11930;Name=IXO1104_RS11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS11930;old_locus_tag=IXO1104_11885;partial=true;pseudo=true;start_range=.,2590901 NZ_CP047492.1 Protein Homology CDS 2590901 2592070 . + 0 ID=cds-IXO1104_RS11930;Parent=gene-IXO1104_RS11930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300451.1;locus_tag=IXO1104_RS11930;partial=true;product=MFS transporter;pseudo=true;start_range=.,2590901;transl_table=11 NZ_CP047492.1 RefSeq gene 2592074 2592149 . - . ID=gene-IXO1104_RS11935;Name=IXO1104_RS11935;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11935;old_locus_tag=IXO1104_11890 NZ_CP047492.1 cmsearch ncRNA 2592074 2592149 . - . ID=rna-IXO1104_RS11935;Parent=gene-IXO1104_RS11935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11935;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2592074 2592149 . - . ID=exon-IXO1104_RS11935-1;Parent=rna-IXO1104_RS11935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11935;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2592211 2592942 . - . ID=gene-IXO1104_RS11940;Name=IXO1104_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11940;old_locus_tag=IXO1104_11895 NZ_CP047492.1 Protein Homology CDS 2592211 2592942 . - 0 ID=cds-WP_011408475.1;Parent=gene-IXO1104_RS11940;Dbxref=Genbank:WP_011408475.1;Name=WP_011408475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371422.1;locus_tag=IXO1104_RS11940;product=phosphatase PAP2 family protein;protein_id=WP_011408475.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2592923 2594188 . - . ID=gene-IXO1104_RS11945;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=IXO1104_RS11945;old_locus_tag=IXO1104_11900 NZ_CP047492.1 Protein Homology CDS 2592923 2594188 . - 0 ID=cds-WP_011408474.1;Parent=gene-IXO1104_RS11945;Dbxref=Genbank:WP_011408474.1;Name=WP_011408474.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300453.1;locus_tag=IXO1104_RS11945;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_011408474.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2594309 2595535 . + . ID=gene-IXO1104_RS11950;Name=IXO1104_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11950;old_locus_tag=IXO1104_11905 NZ_CP047492.1 Protein Homology CDS 2594309 2595535 . + 0 ID=cds-WP_011408473.1;Parent=gene-IXO1104_RS11950;Dbxref=Genbank:WP_011408473.1;Name=WP_011408473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158053.1;locus_tag=IXO1104_RS11950;product=ATP-binding protein;protein_id=WP_011408473.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2595532 2596098 . + . ID=gene-IXO1104_RS11955;Name=IXO1104_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11955;old_locus_tag=IXO1104_11910 NZ_CP047492.1 Protein Homology CDS 2595532 2596098 . + 0 ID=cds-WP_011258919.1;Parent=gene-IXO1104_RS11955;Dbxref=Genbank:WP_011258919.1;Name=WP_011258919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347151.1;locus_tag=IXO1104_RS11955;product=response regulator transcription factor;protein_id=WP_011258919.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2596150 2597208 . - . ID=gene-IXO1104_RS11960;Name=IXO1104_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11960;old_locus_tag=IXO1104_11915 NZ_CP047492.1 Protein Homology CDS 2596150 2597208 . - 0 ID=cds-WP_011258918.1;Parent=gene-IXO1104_RS11960;Dbxref=Genbank:WP_011258918.1;Name=WP_011258918.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS11960;product=IS630 family transposase;protein_id=WP_011258918.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2597339 2597415 . + . ID=gene-IXO1104_RS11965;Name=IXO1104_RS11965;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS11965;old_locus_tag=IXO1104_11920 NZ_CP047492.1 cmsearch ncRNA 2597339 2597415 . + . ID=rna-IXO1104_RS11965;Parent=gene-IXO1104_RS11965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11965;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2597339 2597415 . + . ID=exon-IXO1104_RS11965-1;Parent=rna-IXO1104_RS11965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS11965;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2597420 2599780 . - . ID=gene-IXO1104_RS11970;Name=IXO1104_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11970;old_locus_tag=IXO1104_11925 NZ_CP047492.1 Protein Homology CDS 2597420 2599780 . - 0 ID=cds-WP_011258917.1;Parent=gene-IXO1104_RS11970;Dbxref=Genbank:WP_011258917.1;Name=WP_011258917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090230.1;locus_tag=IXO1104_RS11970;product=RNA-binding transcriptional accessory protein;protein_id=WP_011258917.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2599883 2600110 . - . ID=gene-IXO1104_RS11975;Name=IXO1104_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11975;old_locus_tag=IXO1104_11930 NZ_CP047492.1 Protein Homology CDS 2599883 2600110 . - 0 ID=cds-WP_011408471.1;Parent=gene-IXO1104_RS11975;Dbxref=Genbank:WP_011408471.1;Name=WP_011408471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157548.1;locus_tag=IXO1104_RS11975;product=hypothetical protein;protein_id=WP_011408471.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2600297 2601508 . + . ID=gene-IXO1104_RS11980;Name=IXO1104_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11980;old_locus_tag=IXO1104_11935 NZ_CP047492.1 Protein Homology CDS 2600297 2601508 . + 0 ID=cds-WP_011258915.1;Parent=gene-IXO1104_RS11980;Dbxref=Genbank:WP_011258915.1;Name=WP_011258915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258915.1;locus_tag=IXO1104_RS11980;product=FAD-binding oxidoreductase;protein_id=WP_011258915.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2601466 2601897 . - . ID=gene-IXO1104_RS11985;Name=IXO1104_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11985;old_locus_tag=IXO1104_11940 NZ_CP047492.1 Protein Homology CDS 2601466 2601897 . - 0 ID=cds-WP_228329757.1;Parent=gene-IXO1104_RS11985;Dbxref=Genbank:WP_228329757.1;Name=WP_228329757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904408.1;locus_tag=IXO1104_RS11985;product=hypothetical protein;protein_id=WP_228329757.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2601951 2602148 . - . ID=gene-IXO1104_RS11990;Name=IXO1104_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11990;old_locus_tag=IXO1104_11945 NZ_CP047492.1 Protein Homology CDS 2601951 2602148 . - 0 ID=cds-WP_011258914.1;Parent=gene-IXO1104_RS11990;Dbxref=Genbank:WP_011258914.1;Name=WP_011258914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482814.1;locus_tag=IXO1104_RS11990;product=PspC domain-containing protein;protein_id=WP_011258914.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2602263 2603339 . - . ID=gene-IXO1104_RS11995;Name=IXO1104_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS11995;old_locus_tag=IXO1104_11950 NZ_CP047492.1 Protein Homology CDS 2602263 2603339 . - 0 ID=cds-WP_011258913.1;Parent=gene-IXO1104_RS11995;Dbxref=Genbank:WP_011258913.1;Name=WP_011258913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301741.1;locus_tag=IXO1104_RS11995;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC;protein_id=WP_011258913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2603336 2604562 . - . ID=gene-IXO1104_RS12000;Name=phaE;gbkey=Gene;gene=phaE;gene_biotype=protein_coding;locus_tag=IXO1104_RS12000;old_locus_tag=IXO1104_11955 NZ_CP047492.1 Protein Homology CDS 2603336 2604562 . - 0 ID=cds-WP_012444981.1;Parent=gene-IXO1104_RS12000;Dbxref=Genbank:WP_012444981.1;Name=WP_012444981.1;gbkey=CDS;gene=phaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463162.1;locus_tag=IXO1104_RS12000;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE;protein_id=WP_012444981.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2604618 2605232 . - . ID=gene-IXO1104_RS12005;Name=IXO1104_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12005;old_locus_tag=IXO1104_11960 NZ_CP047492.1 Protein Homology CDS 2604618 2605232 . - 0 ID=cds-WP_011408468.1;Parent=gene-IXO1104_RS12005;Dbxref=Genbank:WP_011408468.1;Name=WP_011408468.1;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408468.1;locus_tag=IXO1104_RS12005;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_011408468.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2605363 2606121 . + . ID=gene-IXO1104_RS12010;Name=IXO1104_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12010;old_locus_tag=IXO1104_11965 NZ_CP047492.1 Protein Homology CDS 2605363 2606121 . + 0 ID=cds-WP_011408467.1;Parent=gene-IXO1104_RS12010;Dbxref=Genbank:WP_011408467.1;Name=WP_011408467.1;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157555.1;locus_tag=IXO1104_RS12010;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_011408467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2606498 2606986 . - . ID=gene-IXO1104_RS12015;Name=IXO1104_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12015;old_locus_tag=IXO1104_11970 NZ_CP047492.1 Protein Homology CDS 2606498 2606986 . - 0 ID=cds-WP_012444982.1;Parent=gene-IXO1104_RS12015;Dbxref=Genbank:WP_012444982.1;Name=WP_012444982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444982.1;locus_tag=IXO1104_RS12015;product=8-oxo-dGTP diphosphatase;protein_id=WP_012444982.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2607071 2607580 . - . ID=gene-IXO1104_RS12020;Name=IXO1104_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12020;old_locus_tag=IXO1104_11975 NZ_CP047492.1 Protein Homology CDS 2607071 2607580 . - 0 ID=cds-WP_012444983.1;Parent=gene-IXO1104_RS12020;Dbxref=Genbank:WP_012444983.1;Name=WP_012444983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157557.1;locus_tag=IXO1104_RS12020;product=DUF1249 domain-containing protein;protein_id=WP_012444983.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2607786 2608607 . - . ID=gene-IXO1104_RS12025;Name=IXO1104_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12025;old_locus_tag=IXO1104_11980 NZ_CP047492.1 Protein Homology CDS 2607786 2608607 . - 0 ID=cds-WP_010373220.1;Parent=gene-IXO1104_RS12025;Dbxref=Genbank:WP_010373220.1;Name=WP_010373220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037311.1;locus_tag=IXO1104_RS12025;product=kinase/pyrophosphorylase;protein_id=WP_010373220.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2608750 2611143 . + . ID=gene-IXO1104_RS12030;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12030;old_locus_tag=IXO1104_11985 NZ_CP047492.1 Protein Homology CDS 2608750 2611143 . + 0 ID=cds-WP_075240037.1;Parent=gene-IXO1104_RS12030;Dbxref=Genbank:WP_075240037.1;Name=WP_075240037.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118687.1;locus_tag=IXO1104_RS12030;product=phosphoenolpyruvate synthase;protein_id=WP_075240037.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2611143 2612129 . + . ID=gene-IXO1104_RS12035;Name=IXO1104_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12035;old_locus_tag=IXO1104_11990 NZ_CP047492.1 Protein Homology CDS 2611143 2612129 . + 0 ID=cds-WP_011258904.1;Parent=gene-IXO1104_RS12035;Dbxref=Genbank:WP_011258904.1;Name=WP_011258904.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157560.1;locus_tag=IXO1104_RS12035;product=mechanosensitive ion channel;protein_id=WP_011258904.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2612341 2612925 . - . ID=gene-IXO1104_RS12040;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=IXO1104_RS12040;old_locus_tag=IXO1104_11995 NZ_CP047492.1 Protein Homology CDS 2612341 2612925 . - 0 ID=cds-WP_011258903.1;Parent=gene-IXO1104_RS12040;Dbxref=Genbank:WP_011258903.1;Name=WP_011258903.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373214.1;locus_tag=IXO1104_RS12040;product=oligoribonuclease;protein_id=WP_011258903.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2612998 2613510 . - . ID=gene-IXO1104_RS12045;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12045;old_locus_tag=IXO1104_12000 NZ_CP047492.1 Protein Homology CDS 2612998 2613510 . - 0 ID=cds-WP_011258902.1;Parent=gene-IXO1104_RS12045;Dbxref=Genbank:WP_011258902.1;Name=WP_011258902.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577150.1;locus_tag=IXO1104_RS12045;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_011258902.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2613507 2613974 . - . ID=gene-IXO1104_RS12050;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=IXO1104_RS12050;old_locus_tag=IXO1104_12005 NZ_CP047492.1 Protein Homology CDS 2613507 2613974 . - 0 ID=cds-WP_011258901.1;Parent=gene-IXO1104_RS12050;Dbxref=Genbank:WP_011258901.1;Name=WP_011258901.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157563.1;locus_tag=IXO1104_RS12050;product=manganese-binding transcriptional regulator MntR;protein_id=WP_011258901.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2614118 2615452 . + . ID=gene-IXO1104_RS12055;Name=IXO1104_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12055;old_locus_tag=IXO1104_12010 NZ_CP047492.1 Protein Homology CDS 2614118 2615452 . + 0 ID=cds-WP_011408462.1;Parent=gene-IXO1104_RS12055;Dbxref=Genbank:WP_011408462.1;Name=WP_011408462.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051299.1;locus_tag=IXO1104_RS12055;product=Nramp family divalent metal transporter;protein_id=WP_011408462.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2616015 2616215 . + . ID=gene-IXO1104_RS12060;Name=IXO1104_RS12060;end_range=2616215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12060;partial=true;pseudo=true;start_range=.,2616015 NZ_CP047492.1 Protein Homology CDS 2616015 2616215 . + 0 ID=cds-IXO1104_RS12060;Parent=gene-IXO1104_RS12060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2616215,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922658.1;locus_tag=IXO1104_RS12060;partial=true;product=response regulator transcription factor;pseudo=true;start_range=.,2616015;transl_table=11 NZ_CP047492.1 RefSeq gene 2616486 2617640 . + . ID=gene-IXO1104_RS12065;Name=IXO1104_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12065 NZ_CP047492.1 Protein Homology CDS 2616486 2617640 . + 0 ID=cds-WP_027703561.1;Parent=gene-IXO1104_RS12065;Dbxref=Genbank:WP_027703561.1;Name=WP_027703561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347407.1;locus_tag=IXO1104_RS12065;product=Cache 3/Cache 2 fusion domain-containing protein;protein_id=WP_027703561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2617683 2618288 . + . ID=gene-IXO1104_RS12070;Name=IXO1104_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12070;old_locus_tag=IXO1104_12020 NZ_CP047492.1 Protein Homology CDS 2617683 2618288 . + 0 ID=cds-WP_011258898.1;Parent=gene-IXO1104_RS12070;Dbxref=Genbank:WP_011258898.1;Name=WP_011258898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157575.1;locus_tag=IXO1104_RS12070;product=hypothetical protein;protein_id=WP_011258898.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2618484 2619407 . - . ID=gene-IXO1104_RS12075;Name=IXO1104_RS12075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12075;old_locus_tag=IXO1104_12025;pseudo=true NZ_CP047492.1 Protein Homology CDS 2618484 2619407 . - 0 ID=cds-IXO1104_RS12075;Parent=gene-IXO1104_RS12075;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408458.1;locus_tag=IXO1104_RS12075;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2619553 2620626 . + . ID=gene-IXO1104_RS12080;Name=IXO1104_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12080;old_locus_tag=IXO1104_12030 NZ_CP047492.1 Protein Homology CDS 2619553 2620626 . + 0 ID=cds-WP_241846852.1;Parent=gene-IXO1104_RS12080;Dbxref=Genbank:WP_241846852.1;Name=WP_241846852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300120.1;locus_tag=IXO1104_RS12080;product=YeiH family putative sulfate export transporter;protein_id=WP_241846852.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2620654 2621082 . - . ID=gene-IXO1104_RS12085;Name=IXO1104_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12085;old_locus_tag=IXO1104_12035 NZ_CP047492.1 Protein Homology CDS 2620654 2621082 . - 0 ID=cds-WP_243743239.1;Parent=gene-IXO1104_RS12085;Dbxref=Genbank:WP_243743239.1;Name=WP_243743239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300121.1;locus_tag=IXO1104_RS12085;product=Rap1a/Tai family immunity protein;protein_id=WP_243743239.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2621182 2621433 . - . ID=gene-IXO1104_RS12090;Name=IXO1104_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12090;old_locus_tag=IXO1104_12040 NZ_CP047492.1 Protein Homology CDS 2621182 2621433 . - 0 ID=cds-WP_229002758.1;Parent=gene-IXO1104_RS12090;Dbxref=Genbank:WP_229002758.1;Name=WP_229002758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=IXO1104_RS12090;product=SDR family oxidoreductase;protein_id=WP_229002758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2621487 2621566 . - . ID=gene-IXO1104_RS12095;Name=IXO1104_RS12095;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS12095;old_locus_tag=IXO1104_12045 NZ_CP047492.1 cmsearch ncRNA 2621487 2621566 . - . ID=rna-IXO1104_RS12095;Parent=gene-IXO1104_RS12095;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12095;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2621487 2621566 . - . ID=exon-IXO1104_RS12095-1;Parent=rna-IXO1104_RS12095;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12095;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2621550 2621624 . + . ID=gene-IXO1104_RS12100;Name=IXO1104_RS12100;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS12100;old_locus_tag=IXO1104_12050 NZ_CP047492.1 cmsearch ncRNA 2621550 2621624 . + . ID=rna-IXO1104_RS12100;Parent=gene-IXO1104_RS12100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12100;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2621550 2621624 . + . ID=exon-IXO1104_RS12100-1;Parent=rna-IXO1104_RS12100;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12100;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2621670 2622560 . - . ID=gene-IXO1104_RS12105;Name=IXO1104_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12105;old_locus_tag=IXO1104_12055 NZ_CP047492.1 Protein Homology CDS 2621670 2622560 . - 0 ID=cds-WP_011408454.1;Parent=gene-IXO1104_RS12105;Dbxref=Genbank:WP_011408454.1;Name=WP_011408454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373162.1;locus_tag=IXO1104_RS12105;product=LysR family transcriptional regulator;protein_id=WP_011408454.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2622670 2624241 . + . ID=gene-IXO1104_RS12110;Name=IXO1104_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12110;old_locus_tag=IXO1104_12060 NZ_CP047492.1 Protein Homology CDS 2622670 2624241 . + 0 ID=cds-WP_011258892.1;Parent=gene-IXO1104_RS12110;Dbxref=Genbank:WP_011258892.1;Name=WP_011258892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160334.1;locus_tag=IXO1104_RS12110;product=proton-conducting transporter membrane subunit;protein_id=WP_011258892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2624264 2626702 . + . ID=gene-IXO1104_RS12115;Name=IXO1104_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12115;old_locus_tag=IXO1104_12065 NZ_CP047492.1 Protein Homology CDS 2624264 2626702 . + 0 ID=cds-WP_011408453.1;Parent=gene-IXO1104_RS12115;Dbxref=Genbank:WP_011408453.1;Name=WP_011408453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182108.1;locus_tag=IXO1104_RS12115;product=DUF2309 domain-containing protein;protein_id=WP_011408453.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2626847 2628412 . - . ID=gene-IXO1104_RS12120;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12120;old_locus_tag=IXO1104_12070 NZ_CP047492.1 Protein Homology CDS 2626847 2628412 . - 0 ID=cds-WP_027703558.1;Parent=gene-IXO1104_RS12120;Dbxref=Genbank:WP_027703558.1;Name=WP_027703558.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=IXO1104_RS12120;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_027703558.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2628539 2629996 . - . ID=gene-IXO1104_RS12125;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12125;old_locus_tag=IXO1104_12075 NZ_CP047492.1 Protein Homology CDS 2628539 2629996 . - 0 ID=cds-WP_011258889.1;Parent=gene-IXO1104_RS12125;Dbxref=Genbank:WP_011258889.1;Name=WP_011258889.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004657166.1;locus_tag=IXO1104_RS12125;product=IMP dehydrogenase;protein_id=WP_011258889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2630185 2631096 . - . ID=gene-IXO1104_RS12130;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=IXO1104_RS12130;old_locus_tag=IXO1104_12080 NZ_CP047492.1 Protein Homology CDS 2630185 2631096 . - 0 ID=cds-WP_011258888.1;Parent=gene-IXO1104_RS12130;Dbxref=Genbank:WP_011258888.1;Name=WP_011258888.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157588.1;locus_tag=IXO1104_RS12130;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_011258888.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2631146 2631466 . + . ID=gene-IXO1104_RS12135;Name=IXO1104_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12135;old_locus_tag=IXO1104_12085 NZ_CP047492.1 Protein Homology CDS 2631146 2631466 . + 0 ID=cds-WP_011258887.1;Parent=gene-IXO1104_RS12135;Dbxref=Genbank:WP_011258887.1;Name=WP_011258887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258887.1;locus_tag=IXO1104_RS12135;product=DUF1244 domain-containing protein;protein_id=WP_011258887.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2631759 2633134 . + . ID=gene-IXO1104_RS12140;Name=IXO1104_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12140;old_locus_tag=IXO1104_12090;pseudo=true NZ_CP047492.1 Protein Homology CDS 2631759 2633134 . + 0 ID=cds-IXO1104_RS12140;Parent=gene-IXO1104_RS12140;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS12140;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2633313 2635133 . - . ID=gene-IXO1104_RS12145;Name=IXO1104_RS12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12145;old_locus_tag=IXO1104_12095;pseudo=true NZ_CP047492.1 Protein Homology CDS 2633313 2635133 . - 0 ID=cds-IXO1104_RS12145;Parent=gene-IXO1104_RS12145;Note=frameshifted;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489640.1;locus_tag=IXO1104_RS12145;product=monovalent cation:proton antiporter-2 (CPA2) family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2635306 2636199 . - . ID=gene-IXO1104_RS12150;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=IXO1104_RS12150;old_locus_tag=IXO1104_12100 NZ_CP047492.1 Protein Homology CDS 2635306 2636199 . - 0 ID=cds-WP_011258884.1;Parent=gene-IXO1104_RS12150;Dbxref=Genbank:WP_011258884.1;Name=WP_011258884.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157591.1;locus_tag=IXO1104_RS12150;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011258884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2636199 2638106 . - . ID=gene-IXO1104_RS12155;Name=IXO1104_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12155;old_locus_tag=IXO1104_12105 NZ_CP047492.1 Protein Homology CDS 2636199 2638106 . - 0 ID=cds-WP_011258883.1;Parent=gene-IXO1104_RS12155;Dbxref=Genbank:WP_011258883.1;Name=WP_011258883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300130.1;locus_tag=IXO1104_RS12155;product=polysaccharide biosynthesis protein;protein_id=WP_011258883.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2638120 2639088 . - . ID=gene-IXO1104_RS12160;Name=IXO1104_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12160;old_locus_tag=IXO1104_12110 NZ_CP047492.1 Protein Homology CDS 2638120 2639088 . - 0 ID=cds-WP_011408448.1;Parent=gene-IXO1104_RS12160;Dbxref=Genbank:WP_011408448.1;Name=WP_011408448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572384.1;locus_tag=IXO1104_RS12160;product=glycosyltransferase family 4 protein;protein_id=WP_011408448.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2639088 2640266 . - . ID=gene-IXO1104_RS12165;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12165;old_locus_tag=IXO1104_12115 NZ_CP047492.1 Protein Homology CDS 2639088 2640266 . - 0 ID=cds-WP_011258881.1;Parent=gene-IXO1104_RS12165;Dbxref=Genbank:WP_011258881.1;Name=WP_011258881.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468665.1;locus_tag=IXO1104_RS12165;product=lipopolysaccharide assembly protein LapB;protein_id=WP_011258881.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2640273 2640578 . - . ID=gene-IXO1104_RS12170;Name=IXO1104_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12170;old_locus_tag=IXO1104_12120 NZ_CP047492.1 Protein Homology CDS 2640273 2640578 . - 0 ID=cds-WP_011258880.1;Parent=gene-IXO1104_RS12170;Dbxref=Genbank:WP_011258880.1;Name=WP_011258880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451180.1;locus_tag=IXO1104_RS12170;product=LapA family protein;protein_id=WP_011258880.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2640646 2640957 . - . ID=gene-IXO1104_RS12175;Name=IXO1104_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12175;old_locus_tag=IXO1104_12125 NZ_CP047492.1 Protein Homology CDS 2640646 2640957 . - 0 ID=cds-WP_011408447.1;Parent=gene-IXO1104_RS12175;Dbxref=Genbank:WP_011408447.1;Name=WP_011408447.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408447.1;locus_tag=IXO1104_RS12175;product=integration host factor subunit beta;protein_id=WP_011408447.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2641046 2642731 . - . ID=gene-IXO1104_RS12180;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12180;old_locus_tag=IXO1104_12130 NZ_CP047492.1 Protein Homology CDS 2641046 2642731 . - 0 ID=cds-WP_011258878.1;Parent=gene-IXO1104_RS12180;Dbxref=Genbank:WP_011258878.1;Name=WP_011258878.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183099.1;locus_tag=IXO1104_RS12180;product=30S ribosomal protein S1;protein_id=WP_011258878.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2642915 2643598 . - . ID=gene-IXO1104_RS12185;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=IXO1104_RS12185;old_locus_tag=IXO1104_12135 NZ_CP047492.1 Protein Homology CDS 2642915 2643598 . - 0 ID=cds-WP_011258877.1;Parent=gene-IXO1104_RS12185;Dbxref=Genbank:WP_011258877.1;Name=WP_011258877.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258877.1;locus_tag=IXO1104_RS12185;product=(d)CMP kinase;protein_id=WP_011258877.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2643771 2643896 . + . ID=gene-IXO1104_RS12190;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=IXO1104_RS12190;old_locus_tag=IXO1104_12140 NZ_CP047492.1 Protein Homology CDS 2643771 2643896 . + 0 ID=cds-WP_005913193.1;Parent=gene-IXO1104_RS12190;Dbxref=Genbank:WP_005913193.1;Name=WP_005913193.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=IXO1104_RS12190;product=type B 50S ribosomal protein L36;protein_id=WP_005913193.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2644163 2644504 . + . ID=gene-IXO1104_RS12195;Name=IXO1104_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12195;old_locus_tag=IXO1104_12145 NZ_CP047492.1 Protein Homology CDS 2644163 2644504 . + 0 ID=cds-WP_011258876.1;Parent=gene-IXO1104_RS12195;Dbxref=Genbank:WP_011258876.1;Name=WP_011258876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489654.1;locus_tag=IXO1104_RS12195;product=hypothetical protein;protein_id=WP_011258876.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2644741 2645775 . + . ID=gene-IXO1104_RS12200;Name=IXO1104_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12200;old_locus_tag=IXO1104_12150 NZ_CP047492.1 Protein Homology CDS 2644741 2645775 . + 0 ID=cds-WP_044756808.1;Parent=gene-IXO1104_RS12200;Dbxref=Genbank:WP_044756808.1;Name=WP_044756808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408446.1;locus_tag=IXO1104_RS12200;product=agmatine deiminase family protein;protein_id=WP_044756808.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2645837 2645913 . + . ID=gene-IXO1104_RS12205;Name=IXO1104_RS12205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS12205;old_locus_tag=IXO1104_12155 NZ_CP047492.1 cmsearch ncRNA 2645837 2645913 . + . ID=rna-IXO1104_RS12205;Parent=gene-IXO1104_RS12205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12205;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2645837 2645913 . + . ID=exon-IXO1104_RS12205-1;Parent=rna-IXO1104_RS12205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12205;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2646045 2646929 . + . ID=gene-IXO1104_RS12210;Name=IXO1104_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12210;old_locus_tag=IXO1104_12160 NZ_CP047492.1 Protein Homology CDS 2646045 2646929 . + 0 ID=cds-WP_075239351.1;Parent=gene-IXO1104_RS12210;Dbxref=Genbank:WP_075239351.1;Name=WP_075239351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451810.1;locus_tag=IXO1104_RS12210;product=carbon-nitrogen hydrolase;protein_id=WP_075239351.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2646934 2647468 . + . ID=gene-IXO1104_RS12215;Name=IXO1104_RS12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12215;old_locus_tag=IXO1104_12165;pseudo=true NZ_CP047492.1 Protein Homology CDS 2646934 2647468 . + 0 ID=cds-IXO1104_RS12215;Parent=gene-IXO1104_RS12215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258873.1;locus_tag=IXO1104_RS12215;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2647465 2648685 . + . ID=gene-IXO1104_RS12220;Name=IXO1104_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12220;old_locus_tag=IXO1104_12170 NZ_CP047492.1 Protein Homology CDS 2647465 2648685 . + 0 ID=cds-WP_011408444.1;Parent=gene-IXO1104_RS12220;Dbxref=Genbank:WP_011408444.1;Name=WP_011408444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237613.1;locus_tag=IXO1104_RS12220;product=TraB/GumN family protein;protein_id=WP_011408444.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2648706 2649077 . - . ID=gene-IXO1104_RS12225;Name=IXO1104_RS12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12225;old_locus_tag=IXO1104_12175;partial=true;pseudo=true;start_range=.,2648706 NZ_CP047492.1 Protein Homology CDS 2648706 2649077 . - 0 ID=cds-IXO1104_RS12225;Parent=gene-IXO1104_RS12225;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849191.1;locus_tag=IXO1104_RS12225;partial=true;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;start_range=.,2648706;transl_table=11 NZ_CP047492.1 RefSeq gene 2649149 2652283 . - . ID=gene-IXO1104_RS12230;Name=IXO1104_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12230;old_locus_tag=IXO1104_12180 NZ_CP047492.1 Protein Homology CDS 2649149 2652283 . - 0 ID=cds-WP_012445001.1;Parent=gene-IXO1104_RS12230;Dbxref=Genbank:WP_012445001.1;Name=WP_012445001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163390.1;locus_tag=IXO1104_RS12230;product=discoidin domain-containing protein;protein_id=WP_012445001.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2652310 2653146 . - . ID=gene-IXO1104_RS12235;Name=IXO1104_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12235;old_locus_tag=IXO1104_12185 NZ_CP047492.1 Protein Homology CDS 2652310 2653146 . - 0 ID=cds-WP_011258870.1;Parent=gene-IXO1104_RS12235;Dbxref=Genbank:WP_011258870.1;Name=WP_011258870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357393.1;locus_tag=IXO1104_RS12235;product=carbohydrate ABC transporter permease;protein_id=WP_011258870.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2653143 2654027 . - . ID=gene-IXO1104_RS12240;Name=IXO1104_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12240;old_locus_tag=IXO1104_12190 NZ_CP047492.1 Protein Homology CDS 2653143 2654027 . - 0 ID=cds-WP_011258869.1;Parent=gene-IXO1104_RS12240;Dbxref=Genbank:WP_011258869.1;Name=WP_011258869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157814.1;locus_tag=IXO1104_RS12240;product=sugar ABC transporter permease;protein_id=WP_011258869.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2654024 2655394 . - . ID=gene-IXO1104_RS12245;Name=IXO1104_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12245;old_locus_tag=IXO1104_12195 NZ_CP047492.1 Protein Homology CDS 2654024 2655394 . - 0 ID=cds-WP_011258868.1;Parent=gene-IXO1104_RS12245;Dbxref=Genbank:WP_011258868.1;Name=WP_011258868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157813.1;locus_tag=IXO1104_RS12245;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011258868.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2655398 2657017 . - . ID=gene-IXO1104_RS12250;Name=IXO1104_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12250;old_locus_tag=IXO1104_12200 NZ_CP047492.1 Protein Homology CDS 2655398 2657017 . - 0 ID=cds-WP_011258867.1;Parent=gene-IXO1104_RS12250;Dbxref=Genbank:WP_011258867.1;Name=WP_011258867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258867.1;locus_tag=IXO1104_RS12250;product=hypothetical protein;protein_id=WP_011258867.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2657120 2657911 . - . ID=gene-IXO1104_RS12255;Name=IXO1104_RS12255;end_range=2657911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12255;old_locus_tag=IXO1104_12205;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2657120 2657911 . - 0 ID=cds-IXO1104_RS12255;Parent=gene-IXO1104_RS12255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2657911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172742.1;locus_tag=IXO1104_RS12255;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2658000 2658956 . + . ID=gene-IXO1104_RS12260;Name=IXO1104_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12260;old_locus_tag=IXO1104_12210 NZ_CP047492.1 Protein Homology CDS 2658000 2658956 . + 0 ID=cds-WP_011407237.1-7;Parent=gene-IXO1104_RS12260;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS12260;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2658931 2661156 . - . ID=gene-IXO1104_RS12265;Name=IXO1104_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12265;old_locus_tag=IXO1104_12215 NZ_CP047492.1 Protein Homology CDS 2658931 2661156 . - 0 ID=cds-WP_241846799.1;Parent=gene-IXO1104_RS12265;Dbxref=Genbank:WP_241846799.1;Name=WP_241846799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=IXO1104_RS12265;product=TonB-dependent receptor;protein_id=WP_241846799.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2661292 2662310 . - . ID=gene-IXO1104_RS12270;Name=IXO1104_RS12270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12270;old_locus_tag=IXO1104_12220;pseudo=true NZ_CP047492.1 Protein Homology CDS 2661292 2662310 . - 0 ID=cds-IXO1104_RS12270;Parent=gene-IXO1104_RS12270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115157.1;locus_tag=IXO1104_RS12270;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2662877 2663200 . - . ID=gene-IXO1104_RS12275;Name=IXO1104_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12275;old_locus_tag=IXO1104_12225 NZ_CP047492.1 Protein Homology CDS 2662877 2663200 . - 0 ID=cds-WP_012445007.1;Parent=gene-IXO1104_RS12275;Dbxref=Genbank:WP_012445007.1;Name=WP_012445007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904540.1;locus_tag=IXO1104_RS12275;product=BolA family transcriptional regulator;protein_id=WP_012445007.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2663197 2663496 . - . ID=gene-IXO1104_RS12280;Name=IXO1104_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12280;old_locus_tag=IXO1104_12230 NZ_CP047492.1 Protein Homology CDS 2663197 2663496 . - 0 ID=cds-WP_027703552.1;Parent=gene-IXO1104_RS12280;Dbxref=Genbank:WP_027703552.1;Name=WP_027703552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503597.1;locus_tag=IXO1104_RS12280;product=YciI family protein;protein_id=WP_027703552.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2663725 2664753 . + . ID=gene-IXO1104_RS12285;Name=IXO1104_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12285;old_locus_tag=IXO1104_12235 NZ_CP047492.1 Protein Homology CDS 2663725 2664753 . + 0 ID=cds-WP_171970778.1;Parent=gene-IXO1104_RS12285;Dbxref=Genbank:WP_171970778.1;Name=WP_171970778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304898.1;locus_tag=IXO1104_RS12285;product=segregation/condensation protein A;protein_id=WP_171970778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2664767 2665966 . + . ID=gene-IXO1104_RS12290;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12290;old_locus_tag=IXO1104_12240 NZ_CP047492.1 Protein Homology CDS 2664767 2665966 . + 0 ID=cds-WP_012445010.1;Parent=gene-IXO1104_RS12290;Dbxref=Genbank:WP_012445010.1;Name=WP_012445010.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382202.1;locus_tag=IXO1104_RS12290;product=SMC-Scp complex subunit ScpB;protein_id=WP_012445010.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2665959 2667599 . + . ID=gene-IXO1104_RS12295;Name=IXO1104_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12295;old_locus_tag=IXO1104_12245 NZ_CP047492.1 Protein Homology CDS 2665959 2667599 . + 0 ID=cds-WP_011408433.1;Parent=gene-IXO1104_RS12295;Dbxref=Genbank:WP_011408433.1;Name=WP_011408433.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163786.1;locus_tag=IXO1104_RS12295;product=pseudouridine synthase;protein_id=WP_011408433.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2667809 2668246 . - . ID=gene-IXO1104_RS12300;Name=IXO1104_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12300;old_locus_tag=IXO1104_12250 NZ_CP047492.1 Protein Homology CDS 2667809 2668246 . - 0 ID=cds-WP_011258859.1;Parent=gene-IXO1104_RS12300;Dbxref=Genbank:WP_011258859.1;Name=WP_011258859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158703.1;locus_tag=IXO1104_RS12300;product=hypothetical protein;protein_id=WP_011258859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2668362 2669180 . + . ID=gene-IXO1104_RS12305;Name=IXO1104_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12305;old_locus_tag=IXO1104_12255 NZ_CP047492.1 Protein Homology CDS 2668362 2669180 . + 0 ID=cds-WP_011258858.1;Parent=gene-IXO1104_RS12305;Dbxref=Genbank:WP_011258858.1;Name=WP_011258858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157804.1;locus_tag=IXO1104_RS12305;product=glutaminyl-peptide cyclotransferase;protein_id=WP_011258858.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2669343 2670308 . + . ID=gene-IXO1104_RS12310;Name=IXO1104_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12310;old_locus_tag=IXO1104_12260 NZ_CP047492.1 Protein Homology CDS 2669343 2670308 . + 0 ID=cds-WP_109181928.1-2;Parent=gene-IXO1104_RS12310;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS12310;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2670329 2671132 . - . ID=gene-IXO1104_RS12315;Name=IXO1104_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12315;old_locus_tag=IXO1104_12265 NZ_CP047492.1 Protein Homology CDS 2670329 2671132 . - 0 ID=cds-WP_075240103.1;Parent=gene-IXO1104_RS12315;Dbxref=Genbank:WP_075240103.1;Name=WP_075240103.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300016.1;locus_tag=IXO1104_RS12315;product=amidohydrolase;protein_id=WP_075240103.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2671272 2672420 . - . ID=gene-IXO1104_RS12320;Name=IXO1104_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12320;old_locus_tag=IXO1104_12270 NZ_CP047492.1 Protein Homology CDS 2671272 2672420 . - 0 ID=cds-WP_075240104.1;Parent=gene-IXO1104_RS12320;Dbxref=Genbank:WP_075240104.1;Name=WP_075240104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964632.1;locus_tag=IXO1104_RS12320;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_075240104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2672647 2673291 . + . ID=gene-IXO1104_RS12325;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12325;old_locus_tag=IXO1104_12275 NZ_CP047492.1 Protein Homology CDS 2672647 2673291 . + 0 ID=cds-WP_075240105.1;Parent=gene-IXO1104_RS12325;Dbxref=Genbank:WP_075240105.1;Name=WP_075240105.1;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971018.1;locus_tag=IXO1104_RS12325;product=heme ABC exporter ATP-binding protein CcmA;protein_id=WP_075240105.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2673288 2673983 . + . ID=gene-IXO1104_RS12330;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12330;old_locus_tag=IXO1104_12280 NZ_CP047492.1 Protein Homology CDS 2673288 2673983 . + 0 ID=cds-WP_075240106.1;Parent=gene-IXO1104_RS12330;Dbxref=Genbank:WP_075240106.1;Name=WP_075240106.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808060.1;locus_tag=IXO1104_RS12330;product=heme exporter protein CcmB;protein_id=WP_075240106.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2674078 2674830 . + . ID=gene-IXO1104_RS12335;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=IXO1104_RS12335;old_locus_tag=IXO1104_12285 NZ_CP047492.1 Protein Homology CDS 2674078 2674830 . + 0 ID=cds-WP_012445013.1;Parent=gene-IXO1104_RS12335;Dbxref=Genbank:WP_012445013.1;Name=WP_012445013.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171667.1;locus_tag=IXO1104_RS12335;product=heme ABC transporter permease CcmC;protein_id=WP_012445013.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2674827 2674997 . + . ID=gene-IXO1104_RS12340;Name=IXO1104_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12340;old_locus_tag=IXO1104_12290 NZ_CP047492.1 Protein Homology CDS 2674827 2674997 . + 0 ID=cds-WP_011258852.1;Parent=gene-IXO1104_RS12340;Dbxref=Genbank:WP_011258852.1;Name=WP_011258852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913150.1;locus_tag=IXO1104_RS12340;product=heme exporter protein CcmD;protein_id=WP_011258852.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2674994 2675464 . + . ID=gene-IXO1104_RS12345;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=IXO1104_RS12345;old_locus_tag=IXO1104_12295 NZ_CP047492.1 Protein Homology CDS 2674994 2675464 . + 0 ID=cds-WP_011258851.1;Parent=gene-IXO1104_RS12345;Dbxref=Genbank:WP_011258851.1;Name=WP_011258851.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503607.1;locus_tag=IXO1104_RS12345;product=cytochrome c maturation protein CcmE;protein_id=WP_011258851.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2675633 2677570 . + . ID=gene-IXO1104_RS12350;Name=IXO1104_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12350;old_locus_tag=IXO1104_12300 NZ_CP047492.1 Protein Homology CDS 2675633 2677570 . + 0 ID=cds-WP_027703720.1;Parent=gene-IXO1104_RS12350;Dbxref=Genbank:WP_027703720.1;Name=WP_027703720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171666.1;locus_tag=IXO1104_RS12350;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_027703720.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2677563 2678165 . + . ID=gene-IXO1104_RS12355;Name=IXO1104_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12355;old_locus_tag=IXO1104_12305 NZ_CP047492.1 Protein Homology CDS 2677563 2678165 . + 0 ID=cds-WP_011258849.1;Parent=gene-IXO1104_RS12355;Dbxref=Genbank:WP_011258849.1;Name=WP_011258849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157799.1;locus_tag=IXO1104_RS12355;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_011258849.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2678162 2678593 . + . ID=gene-IXO1104_RS12360;Name=IXO1104_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12360;old_locus_tag=IXO1104_12310 NZ_CP047492.1 Protein Homology CDS 2678162 2678593 . + 0 ID=cds-WP_011258848.1;Parent=gene-IXO1104_RS12360;Dbxref=Genbank:WP_011258848.1;Name=WP_011258848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051514.1;locus_tag=IXO1104_RS12360;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_011258848.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2678593 2679606 . + . ID=gene-IXO1104_RS12365;Name=IXO1104_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12365;old_locus_tag=IXO1104_12315 NZ_CP047492.1 Protein Homology CDS 2678593 2679606 . + 0 ID=cds-WP_012445015.1;Parent=gene-IXO1104_RS12365;Dbxref=Genbank:WP_012445015.1;Name=WP_012445015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971030.1;locus_tag=IXO1104_RS12365;product=tetratricopeptide repeat protein;protein_id=WP_012445015.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2679739 2679915 . - . ID=gene-IXO1104_RS12370;Name=IXO1104_RS12370;end_range=2679915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12370;old_locus_tag=IXO1104_12320;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2679739 2679915 . - 0 ID=cds-IXO1104_RS12370;Parent=gene-IXO1104_RS12370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2679915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1104_RS12370;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2679896 2681767 . - . ID=gene-IXO1104_RS12375;Name=IXO1104_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12375;old_locus_tag=IXO1104_12325 NZ_CP047492.1 Protein Homology CDS 2679896 2681767 . - 0 ID=cds-WP_075240567.1;Parent=gene-IXO1104_RS12375;Dbxref=Genbank:WP_075240567.1;Name=WP_075240567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258845.1;locus_tag=IXO1104_RS12375;product=DUF4105 domain-containing protein;protein_id=WP_075240567.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2681764 2682063 . - . ID=gene-IXO1104_RS12380;Name=IXO1104_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12380;old_locus_tag=IXO1104_12330 NZ_CP047492.1 Protein Homology CDS 2681764 2682063 . - 0 ID=cds-WP_014503189.1;Parent=gene-IXO1104_RS12380;Dbxref=Genbank:WP_014503189.1;Name=WP_014503189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408424.1;locus_tag=IXO1104_RS12380;product=DUF2388 domain-containing protein;protein_id=WP_014503189.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2682098 2683516 . - . ID=gene-IXO1104_RS12385;Name=IXO1104_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12385;old_locus_tag=IXO1104_12335 NZ_CP047492.1 Protein Homology CDS 2682098 2683516 . - 0 ID=cds-WP_075240568.1;Parent=gene-IXO1104_RS12385;Dbxref=Genbank:WP_075240568.1;Name=WP_075240568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155302.1;locus_tag=IXO1104_RS12385;product=FAD-binding oxidoreductase;protein_id=WP_075240568.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2683725 2684966 . + . ID=gene-IXO1104_RS12390;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12390;old_locus_tag=IXO1104_12340 NZ_CP047492.1 Protein Homology CDS 2683725 2684966 . + 0 ID=cds-WP_011258842.1;Parent=gene-IXO1104_RS12390;Dbxref=Genbank:WP_011258842.1;Name=WP_011258842.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915394.1;locus_tag=IXO1104_RS12390;product=phosphoglycerate dehydrogenase;protein_id=WP_011258842.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2685115 2685702 . - . ID=gene-IXO1104_RS12395;Name=IXO1104_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12395;old_locus_tag=IXO1104_12345 NZ_CP047492.1 Protein Homology CDS 2685115 2685702 . - 0 ID=cds-WP_027703722.1;Parent=gene-IXO1104_RS12395;Dbxref=Genbank:WP_027703722.1;Name=WP_027703722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367142.1;locus_tag=IXO1104_RS12395;product=NUDIX hydrolase;protein_id=WP_027703722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2685848 2687320 . + . ID=gene-IXO1104_RS12400;Name=IXO1104_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12400;old_locus_tag=IXO1104_12350 NZ_CP047492.1 Protein Homology CDS 2685848 2687320 . + 0 ID=cds-WP_033013325.1;Parent=gene-IXO1104_RS12400;Dbxref=Genbank:WP_033013325.1;Name=WP_033013325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922595.1;locus_tag=IXO1104_RS12400;product=amino acid permease;protein_id=WP_033013325.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2687397 2688827 . + . ID=gene-IXO1104_RS12405;Name=IXO1104_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12405;old_locus_tag=IXO1104_12355 NZ_CP047492.1 Protein Homology CDS 2687397 2688827 . + 0 ID=cds-WP_075240569.1;Parent=gene-IXO1104_RS12405;Dbxref=Genbank:WP_075240569.1;Name=WP_075240569.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486240.1;locus_tag=IXO1104_RS12405;product=amino acid permease;protein_id=WP_075240569.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2688916 2689593 . + . ID=gene-IXO1104_RS12410;Name=IXO1104_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12410;old_locus_tag=IXO1104_12360 NZ_CP047492.1 Protein Homology CDS 2688916 2689593 . + 0 ID=cds-WP_011258838.1;Parent=gene-IXO1104_RS12410;Dbxref=Genbank:WP_011258838.1;Name=WP_011258838.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258838.1;locus_tag=IXO1104_RS12410;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_011258838.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2689605 2690171 . + . ID=gene-IXO1104_RS12415;Name=IXO1104_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12415;old_locus_tag=IXO1104_12365 NZ_CP047492.1 Protein Homology CDS 2689605 2690171 . + 0 ID=cds-WP_044756804.1;Parent=gene-IXO1104_RS12415;Dbxref=Genbank:WP_044756804.1;Name=WP_044756804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571451.1;locus_tag=IXO1104_RS12415;product=acireductone dioxygenase;protein_id=WP_044756804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2690174 2690872 . + . ID=gene-IXO1104_RS12420;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=IXO1104_RS12420;old_locus_tag=IXO1104_12370 NZ_CP047492.1 Protein Homology CDS 2690174 2690872 . + 0 ID=cds-WP_075240570.1;Parent=gene-IXO1104_RS12420;Dbxref=Genbank:WP_075240570.1;Name=WP_075240570.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303202.1;locus_tag=IXO1104_RS12420;product=acireductone synthase;protein_id=WP_075240570.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2690931 2691008 . - . ID=gene-IXO1104_RS12425;Name=IXO1104_RS12425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS12425;old_locus_tag=IXO1104_12375 NZ_CP047492.1 cmsearch ncRNA 2690931 2691008 . - . ID=rna-IXO1104_RS12425;Parent=gene-IXO1104_RS12425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12425;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2690931 2691008 . - . ID=exon-IXO1104_RS12425-1;Parent=rna-IXO1104_RS12425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12425;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2691198 2692283 . + . ID=gene-IXO1104_RS12430;Name=IXO1104_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12430;old_locus_tag=IXO1104_12380 NZ_CP047492.1 Protein Homology CDS 2691198 2692283 . + 0 ID=cds-WP_044756803.1;Parent=gene-IXO1104_RS12430;Dbxref=Genbank:WP_044756803.1;Name=WP_044756803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503181.1;locus_tag=IXO1104_RS12430;product=peptidase C13;protein_id=WP_044756803.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2692731 2693998 . - . ID=gene-IXO1104_RS12435;Name=IXO1104_RS12435;end_range=2693998,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12435;old_locus_tag=IXO1104_12385;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2692731 2693998 . - 0 ID=cds-IXO1104_RS12435;Parent=gene-IXO1104_RS12435;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2693998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=IXO1104_RS12435;partial=true;product=calcineurin-like phosphoesterase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2694115 2694858 . + . ID=gene-IXO1104_RS12440;Name=IXO1104_RS12440;end_range=2694858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12440;old_locus_tag=IXO1104_12390;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2694115 2694858 . + 0 ID=cds-IXO1104_RS12440;Parent=gene-IXO1104_RS12440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2694858,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS12440;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2694983 2695951 . - . ID=gene-IXO1104_RS12445;Name=IXO1104_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12445;old_locus_tag=IXO1104_12395 NZ_CP047492.1 Protein Homology CDS 2694983 2695951 . - 0 ID=cds-WP_011258529.1-5;Parent=gene-IXO1104_RS12445;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS12445;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2696060 2696858 . + . ID=gene-IXO1104_RS12450;Name=IXO1104_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12450;old_locus_tag=IXO1104_12400 NZ_CP047492.1 Protein Homology CDS 2696060 2696331 . + 0 ID=cds-WP_094187728.1-6;Parent=gene-IXO1104_RS12450;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS12450;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2696330 2696858 . + 1 ID=cds-WP_094187728.1-6;Parent=gene-IXO1104_RS12450;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS12450;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2696898 2697442 . + . ID=gene-IXO1104_RS12455;Name=IXO1104_RS12455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12455;old_locus_tag=IXO1104_12405;partial=true;pseudo=true;start_range=.,2696898 NZ_CP047492.1 Protein Homology CDS 2696898 2697442 . + 0 ID=cds-IXO1104_RS12455;Parent=gene-IXO1104_RS12455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS12455;partial=true;product=transposase;pseudo=true;start_range=.,2696898;transl_table=11 NZ_CP047492.1 RefSeq gene 2697694 2698833 . + . ID=gene-IXO1104_RS12460;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12460;old_locus_tag=IXO1104_12410 NZ_CP047492.1 Protein Homology CDS 2697694 2698833 . + 0 ID=cds-WP_011259151.1;Parent=gene-IXO1104_RS12460;Dbxref=Genbank:WP_011259151.1;Name=WP_011259151.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259151.1;locus_tag=IXO1104_RS12460;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_011259151.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2698830 2699021 . - . ID=gene-IXO1104_RS12465;Name=IXO1104_RS12465;end_range=2699021,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12465;old_locus_tag=IXO1104_12415;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2698830 2699021 . - 0 ID=cds-IXO1104_RS12465;Parent=gene-IXO1104_RS12465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2699021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS12465;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2699110 2700075 . + . ID=gene-IXO1104_RS12470;Name=IXO1104_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12470;old_locus_tag=IXO1104_12420 NZ_CP047492.1 Protein Homology CDS 2699110 2700075 . + 0 ID=cds-WP_109182067.1-2;Parent=gene-IXO1104_RS12470;Dbxref=Genbank:WP_109182067.1;Name=WP_109182067.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS12470;product=IS1595 family transposase;protein_id=WP_109182067.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2700099 2701444 . - . ID=gene-IXO1104_RS12475;Name=IXO1104_RS12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12475;old_locus_tag=IXO1104_12425;pseudo=true NZ_CP047492.1 Protein Homology CDS 2700099 2701444 . - 0 ID=cds-IXO1104_RS12475;Parent=gene-IXO1104_RS12475;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS12475;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2701647 2702966 . - . ID=gene-IXO1104_RS12480;Name=IXO1104_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12480;old_locus_tag=IXO1104_12430 NZ_CP047492.1 Protein Homology CDS 2701647 2702966 . - 0 ID=cds-WP_263117714.1;Parent=gene-IXO1104_RS12480;Dbxref=Genbank:WP_263117714.1;Name=WP_263117714.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS12480;product=IS701 family transposase;protein_id=WP_263117714.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2703047 2703458 . - . ID=gene-IXO1104_RS12485;Name=IXO1104_RS12485;end_range=2703458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12485;old_locus_tag=IXO1104_12435;partial=true;pseudo=true;start_range=.,2703047 NZ_CP047492.1 Protein Homology CDS 2703047 2703458 . - 0 ID=cds-IXO1104_RS12485;Parent=gene-IXO1104_RS12485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2703458,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS12485;partial=true;product=transposase;pseudo=true;start_range=.,2703047;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2703468 2704280 . - . ID=gene-IXO1104_RS12490;Name=IXO1104_RS12490;end_range=2704280,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12490;old_locus_tag=IXO1104_12440;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2703468 2704280 . - 0 ID=cds-IXO1104_RS12490;Parent=gene-IXO1104_RS12490;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2704280,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS12490;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2704328 2704597 . + . ID=gene-IXO1104_RS12495;Name=IXO1104_RS12495;end_range=2704597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12495;old_locus_tag=IXO1104_12445;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2704328 2704597 . + 0 ID=cds-IXO1104_RS12495;Parent=gene-IXO1104_RS12495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2704597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS12495;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2704661 2705877 . + . ID=gene-IXO1104_RS12500;Name=IXO1104_RS12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12500;old_locus_tag=IXO1104_12450;pseudo=true NZ_CP047492.1 Protein Homology CDS 2704661 2705877 . + 0 ID=cds-IXO1104_RS12500;Parent=gene-IXO1104_RS12500;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS12500;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2705894 2706427 . + . ID=gene-IXO1104_RS12505;Name=IXO1104_RS12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12505;old_locus_tag=IXO1104_12455;partial=true;pseudo=true;start_range=.,2705894 NZ_CP047492.1 Protein Homology CDS 2705894 2706427 . + 0 ID=cds-IXO1104_RS12505;Parent=gene-IXO1104_RS12505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557936.1;locus_tag=IXO1104_RS12505;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2705894;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2706690 2706854 . - . ID=gene-IXO1104_RS12510;Name=IXO1104_RS12510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS12510;old_locus_tag=IXO1104_12465;partial=true;pseudo=true;start_range=.,2706690 NZ_CP047492.1 Protein Homology CDS 2706690 2706854 . - 0 ID=cds-IXO1104_RS12510;Parent=gene-IXO1104_RS12510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS12510;partial=true;product=transposase;pseudo=true;start_range=.,2706690;transl_table=11 NZ_CP047492.1 RefSeq gene 2707234 2708292 . + . ID=gene-IXO1104_RS12515;Name=IXO1104_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12515;old_locus_tag=IXO1104_12470 NZ_CP047492.1 Protein Homology CDS 2707234 2708292 . + 0 ID=cds-WP_206737938.1;Parent=gene-IXO1104_RS12515;Dbxref=Genbank:WP_206737938.1;Name=WP_206737938.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1104_RS12515;product=IS630 family transposase;protein_id=WP_206737938.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2708358 2708434 . + . ID=gene-IXO1104_RS12520;Name=IXO1104_RS12520;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS12520;old_locus_tag=IXO1104_12475 NZ_CP047492.1 cmsearch ncRNA 2708358 2708434 . + . ID=rna-IXO1104_RS12520;Parent=gene-IXO1104_RS12520;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12520;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2708358 2708434 . + . ID=exon-IXO1104_RS12520-1;Parent=rna-IXO1104_RS12520;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS12520;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2708489 2709709 . - . ID=gene-IXO1104_RS12525;Name=IXO1104_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12525;old_locus_tag=IXO1104_12480 NZ_CP047492.1 Protein Homology CDS 2708489 2709709 . - 0 ID=cds-WP_075240705.1;Parent=gene-IXO1104_RS12525;Dbxref=Genbank:WP_075240705.1;Name=WP_075240705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160125.1;locus_tag=IXO1104_RS12525;product=molybdopterin molybdotransferase MoeA;protein_id=WP_075240705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2710024 2711421 . - . ID=gene-IXO1104_RS12530;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=IXO1104_RS12530;old_locus_tag=IXO1104_12485 NZ_CP047492.1 Protein Homology CDS 2710024 2711421 . - 0 ID=cds-WP_075240706.1;Parent=gene-IXO1104_RS12530;Dbxref=Genbank:WP_075240706.1;Name=WP_075240706.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904421.1;locus_tag=IXO1104_RS12530;product=ribosome biogenesis GTPase Der;protein_id=WP_075240706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2711432 2712649 . - . ID=gene-IXO1104_RS12535;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12535;old_locus_tag=IXO1104_12490 NZ_CP047492.1 Protein Homology CDS 2711432 2712649 . - 0 ID=cds-WP_011408657.1;Parent=gene-IXO1104_RS12535;Dbxref=Genbank:WP_011408657.1;Name=WP_011408657.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963809.1;locus_tag=IXO1104_RS12535;product=outer membrane protein assembly factor BamB;protein_id=WP_011408657.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2712649 2713287 . - . ID=gene-IXO1104_RS12540;Name=IXO1104_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12540;old_locus_tag=IXO1104_12495 NZ_CP047492.1 Protein Homology CDS 2712649 2713287 . - 0 ID=cds-WP_011259166.1;Parent=gene-IXO1104_RS12540;Dbxref=Genbank:WP_011259166.1;Name=WP_011259166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503367.1;locus_tag=IXO1104_RS12540;product=tetratricopeptide repeat protein;protein_id=WP_011259166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2713358 2714218 . - . ID=gene-IXO1104_RS12545;Name=IXO1104_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12545;old_locus_tag=IXO1104_12500 NZ_CP047492.1 Protein Homology CDS 2713358 2714218 . - 0 ID=cds-WP_011259167.1;Parent=gene-IXO1104_RS12545;Dbxref=Genbank:WP_011259167.1;Name=WP_011259167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445040.1;locus_tag=IXO1104_RS12545;product=helix-turn-helix domain-containing protein;protein_id=WP_011259167.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2714215 2715003 . - . ID=gene-IXO1104_RS12550;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=IXO1104_RS12550;old_locus_tag=IXO1104_12505 NZ_CP047492.1 Protein Homology CDS 2714215 2715003 . - 0 ID=cds-WP_011408658.1;Parent=gene-IXO1104_RS12550;Dbxref=Genbank:WP_011408658.1;Name=WP_011408658.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158306.1;locus_tag=IXO1104_RS12550;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_011408658.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2715014 2716207 . - . ID=gene-IXO1104_RS12555;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=IXO1104_RS12555;old_locus_tag=IXO1104_12510 NZ_CP047492.1 Protein Homology CDS 2715014 2716207 . - 0 ID=cds-WP_228329755.1;Parent=gene-IXO1104_RS12555;Dbxref=Genbank:WP_228329755.1;Name=WP_228329755.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914477.1;locus_tag=IXO1104_RS12555;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_228329755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2716238 2716663 . - . ID=gene-IXO1104_RS12560;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=IXO1104_RS12560;old_locus_tag=IXO1104_12515 NZ_CP047492.1 Protein Homology CDS 2716238 2716663 . - 0 ID=cds-WP_002812972.1;Parent=gene-IXO1104_RS12560;Dbxref=Genbank:WP_002812972.1;Name=WP_002812972.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=IXO1104_RS12560;product=nucleoside-diphosphate kinase;protein_id=WP_002812972.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2716883 2717515 . + . ID=gene-IXO1104_RS12565;Name=IXO1104_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12565;old_locus_tag=IXO1104_12520 NZ_CP047492.1 Protein Homology CDS 2716883 2717515 . + 0 ID=cds-WP_011259170.1;Parent=gene-IXO1104_RS12565;Dbxref=Genbank:WP_011259170.1;Name=WP_011259170.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463154.1;locus_tag=IXO1104_RS12565;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011259170.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2717540 2719912 . + . ID=gene-IXO1104_RS12570;Name=IXO1104_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12570;old_locus_tag=IXO1104_12525 NZ_CP047492.1 Protein Homology CDS 2717540 2719912 . + 0 ID=cds-WP_011259171.1;Parent=gene-IXO1104_RS12570;Dbxref=Genbank:WP_011259171.1;Name=WP_011259171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158309.1;locus_tag=IXO1104_RS12570;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_011259171.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2720070 2721275 . + . ID=gene-IXO1104_RS12575;Name=IXO1104_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12575;old_locus_tag=IXO1104_12530 NZ_CP047492.1 Protein Homology CDS 2720070 2721275 . + 0 ID=cds-WP_011259172.1;Parent=gene-IXO1104_RS12575;Dbxref=Genbank:WP_011259172.1;Name=WP_011259172.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812978.1;locus_tag=IXO1104_RS12575;product=acetyl-CoA C-acyltransferase;protein_id=WP_011259172.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2721318 2722116 . + . ID=gene-IXO1104_RS12580;Name=IXO1104_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12580;old_locus_tag=IXO1104_12535 NZ_CP047492.1 Protein Homology CDS 2721318 2721589 . + 0 ID=cds-WP_094187763.1-5;Parent=gene-IXO1104_RS12580;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS12580;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2721588 2722116 . + 1 ID=cds-WP_094187763.1-5;Parent=gene-IXO1104_RS12580;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS12580;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 2722285 2722361 . + . ID=id-NZ_CP047492.1:2722285..2722361;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 2722448 2723779 . + . ID=gene-IXO1104_RS12585;Name=IXO1104_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12585;old_locus_tag=IXO1104_12540 NZ_CP047492.1 Protein Homology CDS 2722448 2723779 . + 0 ID=cds-WP_011259173.1;Parent=gene-IXO1104_RS12585;Dbxref=Genbank:WP_011259173.1;Name=WP_011259173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503359.1;locus_tag=IXO1104_RS12585;product=voltage-gated chloride channel family protein;protein_id=WP_011259173.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2723776 2724126 . + . ID=gene-IXO1104_RS12590;Name=IXO1104_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12590;old_locus_tag=IXO1104_12545 NZ_CP047492.1 Protein Homology CDS 2723776 2724126 . + 0 ID=cds-WP_069964891.1;Parent=gene-IXO1104_RS12590;Dbxref=Genbank:WP_069964891.1;Name=WP_069964891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408659.1;locus_tag=IXO1104_RS12590;product=hypothetical protein;protein_id=WP_069964891.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2724158 2724565 . + . ID=gene-IXO1104_RS12595;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12595;old_locus_tag=IXO1104_12550 NZ_CP047492.1 Protein Homology CDS 2724158 2724565 . + 0 ID=cds-WP_011408660.1;Parent=gene-IXO1104_RS12595;Dbxref=Genbank:WP_011408660.1;Name=WP_011408660.1;Ontology_term=GO:0016021;gbkey=CDS;gene=crcB;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503356.1;locus_tag=IXO1104_RS12595;product=fluoride efflux transporter CrcB;protein_id=WP_011408660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2724562 2724888 . + . ID=gene-IXO1104_RS12600;Name=IXO1104_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12600;old_locus_tag=IXO1104_12555 NZ_CP047492.1 Protein Homology CDS 2724562 2724888 . + 0 ID=cds-WP_011259175.1;Parent=gene-IXO1104_RS12600;Dbxref=Genbank:WP_011259175.1;Name=WP_011259175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259175.1;locus_tag=IXO1104_RS12600;product=DUF190 domain-containing protein;protein_id=WP_011259175.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2724920 2726296 . - . ID=gene-IXO1104_RS12605;Name=IXO1104_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12605;old_locus_tag=IXO1104_12560 NZ_CP047492.1 Protein Homology CDS 2724920 2726296 . - 0 ID=cds-WP_011259176.1;Parent=gene-IXO1104_RS12605;Dbxref=Genbank:WP_011259176.1;Name=WP_011259176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303930.1;locus_tag=IXO1104_RS12605;product=replication-associated recombination protein A;protein_id=WP_011259176.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2726533 2730699 . + . ID=gene-IXO1104_RS12610;Name=IXO1104_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12610;old_locus_tag=IXO1104_12565 NZ_CP047492.1 Protein Homology CDS 2726533 2730699 . + 0 ID=cds-WP_011259177.1;Parent=gene-IXO1104_RS12610;Dbxref=Genbank:WP_011259177.1;Name=WP_011259177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973390.1;locus_tag=IXO1104_RS12610;product=hypothetical protein;protein_id=WP_011259177.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2730812 2731483 . - . ID=gene-IXO1104_RS12615;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12615;old_locus_tag=IXO1104_12570 NZ_CP047492.1 Protein Homology CDS 2730812 2731483 . - 0 ID=cds-WP_075240444.1;Parent=gene-IXO1104_RS12615;Dbxref=Genbank:WP_075240444.1;Name=WP_075240444.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301000.1;locus_tag=IXO1104_RS12615;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_075240444.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2731548 2733476 . - . ID=gene-IXO1104_RS12620;Name=IXO1104_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12620;old_locus_tag=IXO1104_12575 NZ_CP047492.1 Protein Homology CDS 2731548 2733476 . - 0 ID=cds-WP_011259179.1;Parent=gene-IXO1104_RS12620;Dbxref=Genbank:WP_011259179.1;Name=WP_011259179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373562.1;locus_tag=IXO1104_RS12620;product=DUF3857 and transglutaminase domain-containing protein;protein_id=WP_011259179.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2733639 2735999 . - . ID=gene-IXO1104_RS12625;Name=IXO1104_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12625;old_locus_tag=IXO1104_12580 NZ_CP047492.1 Protein Homology CDS 2733639 2735999 . - 0 ID=cds-WP_011259180.1;Parent=gene-IXO1104_RS12625;Dbxref=Genbank:WP_011259180.1;Name=WP_011259180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259180.1;locus_tag=IXO1104_RS12625;product=DNA translocase FtsK;protein_id=WP_011259180.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2736283 2737251 . + . ID=gene-IXO1104_RS12630;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12630;old_locus_tag=IXO1104_12585 NZ_CP047492.1 Protein Homology CDS 2736283 2737251 . + 0 ID=cds-WP_075240445.1;Parent=gene-IXO1104_RS12630;Dbxref=Genbank:WP_075240445.1;Name=WP_075240445.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964266.1;locus_tag=IXO1104_RS12630;product=thioredoxin-disulfide reductase;protein_id=WP_075240445.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2737309 2738430 . + . ID=gene-IXO1104_RS12635;Name=IXO1104_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12635;old_locus_tag=IXO1104_12590 NZ_CP047492.1 Protein Homology CDS 2737309 2738430 . + 0 ID=cds-WP_011408662.1;Parent=gene-IXO1104_RS12635;Dbxref=Genbank:WP_011408662.1;Name=WP_011408662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300271.1;locus_tag=IXO1104_RS12635;product=GNAT family N-acetyltransferase;protein_id=WP_011408662.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2738692 2739024 . + . ID=gene-IXO1104_RS12640;Name=IXO1104_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12640 NZ_CP047492.1 Protein Homology CDS 2738692 2739024 . + 0 ID=cds-WP_011408663.1;Parent=gene-IXO1104_RS12640;Dbxref=Genbank:WP_011408663.1;Name=WP_011408663.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=IXO1104_RS12640;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011408663.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2739095 2739289 . + . ID=gene-IXO1104_RS12645;Name=IXO1104_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12645 NZ_CP047492.1 GeneMarkS-2+ CDS 2739095 2739289 . + 0 ID=cds-WP_012445049.1;Parent=gene-IXO1104_RS12645;Dbxref=Genbank:WP_012445049.1;Name=WP_012445049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS12645;product=hypothetical protein;protein_id=WP_012445049.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2739323 2739724 . + . ID=gene-IXO1104_RS12650;Name=IXO1104_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12650 NZ_CP047492.1 GeneMarkS-2+ CDS 2739323 2739724 . + 0 ID=cds-WP_011259184.1;Parent=gene-IXO1104_RS12650;Dbxref=Genbank:WP_011259184.1;Name=WP_011259184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS12650;product=hypothetical protein;protein_id=WP_011259184.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2739813 2740610 . + . ID=gene-IXO1104_RS12655;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=IXO1104_RS12655;old_locus_tag=IXO1104_12600 NZ_CP047492.1 Protein Homology CDS 2739813 2740610 . + 0 ID=cds-WP_011259185.1;Parent=gene-IXO1104_RS12655;Dbxref=Genbank:WP_011259185.1;Name=WP_011259185.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503344.1;locus_tag=IXO1104_RS12655;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_011259185.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2740691 2740909 . + . ID=gene-IXO1104_RS12660;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12660;old_locus_tag=IXO1104_12605 NZ_CP047492.1 Protein Homology CDS 2740691 2740909 . + 0 ID=cds-WP_002813418.1;Parent=gene-IXO1104_RS12660;Dbxref=Genbank:WP_002813418.1;Name=WP_002813418.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553999.1;locus_tag=IXO1104_RS12660;product=translation initiation factor IF-1;protein_id=WP_002813418.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2741190 2743472 . - . ID=gene-IXO1104_RS12665;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12665;old_locus_tag=IXO1104_12610 NZ_CP047492.1 Protein Homology CDS 2741190 2743472 . - 0 ID=cds-WP_011408664.1;Parent=gene-IXO1104_RS12665;Dbxref=Genbank:WP_011408664.1;Name=WP_011408664.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901749.1;locus_tag=IXO1104_RS12665;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011408664.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2743616 2743936 . - . ID=gene-IXO1104_RS12670;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=IXO1104_RS12670;old_locus_tag=IXO1104_12615 NZ_CP047492.1 Protein Homology CDS 2743616 2743936 . - 0 ID=cds-WP_005914463.1;Parent=gene-IXO1104_RS12670;Dbxref=Genbank:WP_005914463.1;Name=WP_005914463.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914463.1;locus_tag=IXO1104_RS12670;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_005914463.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2744187 2744645 . + . ID=gene-IXO1104_RS12675;Name=IXO1104_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12675;old_locus_tag=IXO1104_12620 NZ_CP047492.1 Protein Homology CDS 2744187 2744645 . + 0 ID=cds-WP_011408665.1;Parent=gene-IXO1104_RS12675;Dbxref=Genbank:WP_011408665.1;Name=WP_011408665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964277.1;locus_tag=IXO1104_RS12675;product=NUDIX hydrolase;protein_id=WP_011408665.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2744642 2745778 . + . ID=gene-IXO1104_RS12680;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12680;old_locus_tag=IXO1104_12625 NZ_CP047492.1 Protein Homology CDS 2744642 2745778 . + 0 ID=cds-WP_011259189.1;Parent=gene-IXO1104_RS12680;Dbxref=Genbank:WP_011259189.1;Name=WP_011259189.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575784.1;locus_tag=IXO1104_RS12680;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_011259189.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2745778 2746392 . + . ID=gene-IXO1104_RS12685;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=IXO1104_RS12685;old_locus_tag=IXO1104_12630 NZ_CP047492.1 Protein Homology CDS 2745778 2746392 . + 0 ID=cds-WP_011408667.1;Parent=gene-IXO1104_RS12685;Dbxref=Genbank:WP_011408667.1;Name=WP_011408667.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_029217215.1;locus_tag=IXO1104_RS12685;product=high frequency lysogenization protein HflD;protein_id=WP_011408667.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2746453 2747730 . + . ID=gene-IXO1104_RS12690;Name=IXO1104_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12690;old_locus_tag=IXO1104_12635 NZ_CP047492.1 Protein Homology CDS 2746453 2747730 . + 0 ID=cds-WP_011259191.1;Parent=gene-IXO1104_RS12690;Dbxref=Genbank:WP_011259191.1;Name=WP_011259191.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159263.1;locus_tag=IXO1104_RS12690;product=methyl-accepting chemotaxis protein;protein_id=WP_011259191.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2747816 2748103 . + . ID=gene-IXO1104_RS12695;Name=IXO1104_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12695;old_locus_tag=IXO1104_12640 NZ_CP047492.1 Protein Homology CDS 2747816 2748103 . + 0 ID=cds-WP_011259192.1;Parent=gene-IXO1104_RS12695;Dbxref=Genbank:WP_011259192.1;Name=WP_011259192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575786.1;locus_tag=IXO1104_RS12695;product=hypothetical protein;protein_id=WP_011259192.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2748378 2749061 . + . ID=gene-IXO1104_RS12700;Name=IXO1104_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12700;old_locus_tag=IXO1104_12645 NZ_CP047492.1 Protein Homology CDS 2748378 2749061 . + 0 ID=cds-WP_044756798.1;Parent=gene-IXO1104_RS12700;Dbxref=Genbank:WP_044756798.1;Name=WP_044756798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259193.1;locus_tag=IXO1104_RS12700;product=hypothetical protein;protein_id=WP_044756798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2749532 2752318 . - . ID=gene-IXO1104_RS12705;Name=IXO1104_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12705;old_locus_tag=IXO1104_12650 NZ_CP047492.1 Protein Homology CDS 2749532 2752318 . - 0 ID=cds-WP_178385303.1;Parent=gene-IXO1104_RS12705;Dbxref=Genbank:WP_178385303.1;Name=WP_178385303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347293.1;locus_tag=IXO1104_RS12705;product=EAL domain-containing protein;protein_id=WP_178385303.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2752439 2754571 . + . ID=gene-IXO1104_RS12710;Name=IXO1104_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12710;old_locus_tag=IXO1104_12655 NZ_CP047492.1 Protein Homology CDS 2752439 2754571 . + 0 ID=cds-WP_011408672.1;Parent=gene-IXO1104_RS12710;Dbxref=Genbank:WP_011408672.1;Name=WP_011408672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848734.1;locus_tag=IXO1104_RS12710;product=PAS domain S-box protein;protein_id=WP_011408672.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2754575 2756296 . + . ID=gene-IXO1104_RS12715;Name=IXO1104_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12715;old_locus_tag=IXO1104_12660 NZ_CP047492.1 Protein Homology CDS 2754575 2756296 . + 0 ID=cds-WP_041182670.1;Parent=gene-IXO1104_RS12715;Dbxref=Genbank:WP_041182670.1;Name=WP_041182670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154643.1;locus_tag=IXO1104_RS12715;product=EAL domain-containing protein;protein_id=WP_041182670.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2756424 2757650 . - . ID=gene-IXO1104_RS12720;Name=IXO1104_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12720;old_locus_tag=IXO1104_12665 NZ_CP047492.1 Protein Homology CDS 2756424 2757650 . - 0 ID=cds-WP_011259197.1;Parent=gene-IXO1104_RS12720;Dbxref=Genbank:WP_011259197.1;Name=WP_011259197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304404.1;locus_tag=IXO1104_RS12720;product=ATP-binding protein;protein_id=WP_011259197.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2757816 2758148 . - . ID=gene-IXO1104_RS12725;Name=IXO1104_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12725;old_locus_tag=IXO1104_12670 NZ_CP047492.1 Protein Homology CDS 2757816 2758148 . - 0 ID=cds-WP_010373599.1;Parent=gene-IXO1104_RS12725;Dbxref=Genbank:WP_010373599.1;Name=WP_010373599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450202.1;locus_tag=IXO1104_RS12725;product=hypothetical protein;protein_id=WP_010373599.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2758164 2758475 . - . ID=gene-IXO1104_RS12730;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=IXO1104_RS12730;old_locus_tag=IXO1104_12675 NZ_CP047492.1 Protein Homology CDS 2758164 2758475 . - 0 ID=cds-WP_011259198.1;Parent=gene-IXO1104_RS12730;Dbxref=Genbank:WP_011259198.1;Name=WP_011259198.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503328.1;locus_tag=IXO1104_RS12730;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_011259198.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2758542 2759186 . - . ID=gene-IXO1104_RS12735;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12735;old_locus_tag=IXO1104_12680 NZ_CP047492.1 Protein Homology CDS 2758542 2759186 . - 0 ID=cds-WP_011259199.1;Parent=gene-IXO1104_RS12735;Dbxref=Genbank:WP_011259199.1;Name=WP_011259199.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373601.1;locus_tag=IXO1104_RS12735;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_011259199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2759545 2760489 . + . ID=gene-IXO1104_RS12740;Name=IXO1104_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12740;old_locus_tag=IXO1104_12685 NZ_CP047492.1 Protein Homology CDS 2759545 2760489 . + 0 ID=cds-WP_011259200.1;Parent=gene-IXO1104_RS12740;Dbxref=Genbank:WP_011259200.1;Name=WP_011259200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813451.1;locus_tag=IXO1104_RS12740;product=chemotaxis protein;protein_id=WP_011259200.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2760804 2761202 . + . ID=gene-IXO1104_RS12745;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12745;old_locus_tag=IXO1104_12690 NZ_CP047492.1 Protein Homology CDS 2760804 2761202 . + 0 ID=cds-WP_011259201.1;Parent=gene-IXO1104_RS12745;Dbxref=Genbank:WP_011259201.1;Name=WP_011259201.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482950.1;locus_tag=IXO1104_RS12745;product=flagellar basal body rod protein FlgB;protein_id=WP_011259201.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2761206 2761613 . + . ID=gene-IXO1104_RS12750;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=IXO1104_RS12750;old_locus_tag=IXO1104_12695 NZ_CP047492.1 Protein Homology CDS 2761206 2761613 . + 0 ID=cds-WP_005914451.1;Parent=gene-IXO1104_RS12750;Dbxref=Genbank:WP_005914451.1;Name=WP_005914451.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425624.1;locus_tag=IXO1104_RS12750;product=flagellar basal body rod protein FlgC;protein_id=WP_005914451.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2761651 2762316 . + . ID=gene-IXO1104_RS12755;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=IXO1104_RS12755;old_locus_tag=IXO1104_12700 NZ_CP047492.1 Protein Homology CDS 2761651 2762316 . + 0 ID=cds-WP_011259203.1;Parent=gene-IXO1104_RS12755;Dbxref=Genbank:WP_011259203.1;Name=WP_011259203.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117421.1;locus_tag=IXO1104_RS12755;product=flagellar basal body rod modification protein FlgD;protein_id=WP_011259203.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2762348 2763571 . + . ID=gene-IXO1104_RS12760;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=IXO1104_RS12760;old_locus_tag=IXO1104_12705 NZ_CP047492.1 Protein Homology CDS 2762348 2763571 . + 0 ID=cds-WP_011259204.1;Parent=gene-IXO1104_RS12760;Dbxref=Genbank:WP_011259204.1;Name=WP_011259204.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159265.1;locus_tag=IXO1104_RS12760;product=flagellar hook protein FlgE;protein_id=WP_011259204.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2763717 2764472 . + . ID=gene-IXO1104_RS12765;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=IXO1104_RS12765;old_locus_tag=IXO1104_12710 NZ_CP047492.1 Protein Homology CDS 2763717 2764472 . + 0 ID=cds-WP_011259205.1;Parent=gene-IXO1104_RS12765;Dbxref=Genbank:WP_011259205.1;Name=WP_011259205.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=flgF;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154648.1;locus_tag=IXO1104_RS12765;product=flagellar basal-body rod protein FlgF;protein_id=WP_011259205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2765059 2765844 . + . ID=gene-IXO1104_RS12770;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=IXO1104_RS12770;old_locus_tag=IXO1104_12720 NZ_CP047492.1 Protein Homology CDS 2765059 2765844 . + 0 ID=cds-WP_011259206.1;Parent=gene-IXO1104_RS12770;Dbxref=Genbank:WP_011259206.1;Name=WP_011259206.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901723.1;locus_tag=IXO1104_RS12770;product=flagellar basal-body rod protein FlgG;protein_id=WP_011259206.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2765882 2766574 . + . ID=gene-IXO1104_RS12775;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=IXO1104_RS12775;old_locus_tag=IXO1104_12725 NZ_CP047492.1 Protein Homology CDS 2765882 2766574 . + 0 ID=cds-WP_011259207.1;Parent=gene-IXO1104_RS12775;Dbxref=Genbank:WP_011259207.1;Name=WP_011259207.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901722.1;locus_tag=IXO1104_RS12775;product=flagellar basal body L-ring protein FlgH;protein_id=WP_011259207.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2766585 2767703 . + . ID=gene-IXO1104_RS12780;Name=IXO1104_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12780;old_locus_tag=IXO1104_12730 NZ_CP047492.1 Protein Homology CDS 2766585 2767703 . + 0 ID=cds-WP_011259208.1;Parent=gene-IXO1104_RS12780;Dbxref=Genbank:WP_011259208.1;Name=WP_011259208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482965.1;locus_tag=IXO1104_RS12780;product=flagellar basal body P-ring protein FlgI;protein_id=WP_011259208.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2767705 2768883 . + . ID=gene-IXO1104_RS12785;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS12785;old_locus_tag=IXO1104_12735 NZ_CP047492.1 Protein Homology CDS 2767705 2768883 . + 0 ID=cds-WP_011259209.1;Parent=gene-IXO1104_RS12785;Dbxref=Genbank:WP_011259209.1;Name=WP_011259209.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482966.1;locus_tag=IXO1104_RS12785;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_011259209.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2768895 2770769 . + . ID=gene-IXO1104_RS12790;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=IXO1104_RS12790;old_locus_tag=IXO1104_12740 NZ_CP047492.1 Protein Homology CDS 2768895 2770769 . + 0 ID=cds-WP_011259210.1;Parent=gene-IXO1104_RS12790;Dbxref=Genbank:WP_011259210.1;Name=WP_011259210.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300294.1;locus_tag=IXO1104_RS12790;product=flagellar hook-associated protein FlgK;protein_id=WP_011259210.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2770769 2771974 . + . ID=gene-IXO1104_RS12795;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=IXO1104_RS12795;old_locus_tag=IXO1104_12745 NZ_CP047492.1 Protein Homology CDS 2770769 2771974 . + 0 ID=cds-WP_011259211.1;Parent=gene-IXO1104_RS12795;Dbxref=Genbank:WP_011259211.1;Name=WP_011259211.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154653.1;locus_tag=IXO1104_RS12795;product=flagellar hook-associated protein FlgL;protein_id=WP_011259211.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2772294 2773493 . + . ID=gene-IXO1104_RS12800;Name=IXO1104_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12800;old_locus_tag=IXO1104_12750 NZ_CP047492.1 Protein Homology CDS 2772294 2773493 . + 0 ID=cds-WP_011408675.1;Parent=gene-IXO1104_RS12800;Dbxref=Genbank:WP_011408675.1;Name=WP_011408675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962409.1;locus_tag=IXO1104_RS12800;product=flagellin;protein_id=WP_011408675.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2773767 2775092 . + . ID=gene-IXO1104_RS12805;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=IXO1104_RS12805;old_locus_tag=IXO1104_12755 NZ_CP047492.1 Protein Homology CDS 2773767 2775092 . + 0 ID=cds-WP_075239987.1;Parent=gene-IXO1104_RS12805;Dbxref=Genbank:WP_075239987.1;Name=WP_075239987.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380873.1;locus_tag=IXO1104_RS12805;product=flagellar filament capping protein FliD;protein_id=WP_075239987.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2775243 2775656 . + . ID=gene-IXO1104_RS12810;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=IXO1104_RS12810;old_locus_tag=IXO1104_12760 NZ_CP047492.1 Protein Homology CDS 2775243 2775656 . + 0 ID=cds-WP_011259214.1;Parent=gene-IXO1104_RS12810;Dbxref=Genbank:WP_011259214.1;Name=WP_011259214.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575950.1;locus_tag=IXO1104_RS12810;product=flagellar export chaperone FliS;protein_id=WP_011259214.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2775665 2775958 . + . ID=gene-IXO1104_RS12815;Name=IXO1104_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12815;old_locus_tag=IXO1104_12765 NZ_CP047492.1 Protein Homology CDS 2775665 2775958 . + 0 ID=cds-WP_019302728.1;Parent=gene-IXO1104_RS12815;Dbxref=Genbank:WP_019302728.1;Name=WP_019302728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154657.1;locus_tag=IXO1104_RS12815;product=hypothetical protein;protein_id=WP_019302728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2775958 2776524 . + . ID=gene-IXO1104_RS12820;Name=IXO1104_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12820;old_locus_tag=IXO1104_12770 NZ_CP047492.1 Protein Homology CDS 2775958 2776524 . + 0 ID=cds-WP_069964892.1;Parent=gene-IXO1104_RS12820;Dbxref=Genbank:WP_069964892.1;Name=WP_069964892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154658.1;locus_tag=IXO1104_RS12820;product=PilZ domain-containing protein;protein_id=WP_069964892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2776595 2777227 . + . ID=gene-IXO1104_RS12825;Name=IXO1104_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12825;old_locus_tag=IXO1104_12775 NZ_CP047492.1 Protein Homology CDS 2776595 2777227 . + 0 ID=cds-WP_003482986.1;Parent=gene-IXO1104_RS12825;Dbxref=Genbank:WP_003482986.1;Name=WP_003482986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037101.1;locus_tag=IXO1104_RS12825;product=response regulator transcription factor;protein_id=WP_003482986.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2777451 2778854 . + . ID=gene-IXO1104_RS12830;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=IXO1104_RS12830;old_locus_tag=IXO1104_12780 NZ_CP047492.1 Protein Homology CDS 2777451 2778854 . + 0 ID=cds-WP_011259217.1;Parent=gene-IXO1104_RS12830;Dbxref=Genbank:WP_011259217.1;Name=WP_011259217.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302731.1;locus_tag=IXO1104_RS12830;product=RNA polymerase factor sigma-54;protein_id=WP_011259217.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2778863 2779243 . + . ID=gene-IXO1104_RS12835;Name=IXO1104_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12835;old_locus_tag=IXO1104_12785 NZ_CP047492.1 Protein Homology CDS 2778863 2779243 . + 0 ID=cds-WP_011259218.1;Parent=gene-IXO1104_RS12835;Dbxref=Genbank:WP_011259218.1;Name=WP_011259218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259218.1;locus_tag=IXO1104_RS12835;product=response regulator transcription factor;protein_id=WP_011259218.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2779240 2780724 . + . ID=gene-IXO1104_RS12840;Name=IXO1104_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12840;old_locus_tag=IXO1104_12790 NZ_CP047492.1 Protein Homology CDS 2779240 2780724 . + 0 ID=cds-WP_011408677.1;Parent=gene-IXO1104_RS12840;Dbxref=Genbank:WP_011408677.1;Name=WP_011408677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452274.1;locus_tag=IXO1104_RS12840;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011408677.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2780843 2781952 . + . ID=gene-IXO1104_RS12845;Name=IXO1104_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12845;old_locus_tag=IXO1104_12795 NZ_CP047492.1 Protein Homology CDS 2780843 2781952 . + 0 ID=cds-WP_041182148.1;Parent=gene-IXO1104_RS12845;Dbxref=Genbank:WP_041182148.1;Name=WP_041182148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373650.1;locus_tag=IXO1104_RS12845;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_041182148.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2782017 2782241 . + . ID=gene-IXO1104_RS12850;Name=IXO1104_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12850;old_locus_tag=IXO1104_12800 NZ_CP047492.1 Protein Homology CDS 2782017 2782241 . + 0 ID=cds-WP_011408679.1;Parent=gene-IXO1104_RS12850;Dbxref=Genbank:WP_011408679.1;Name=WP_011408679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302780.1;locus_tag=IXO1104_RS12850;product=acyl carrier protein;protein_id=WP_011408679.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2782247 2783287 . + . ID=gene-IXO1104_RS12855;Name=IXO1104_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12855;old_locus_tag=IXO1104_12805 NZ_CP047492.1 Protein Homology CDS 2782247 2783287 . + 0 ID=cds-WP_011259222.1;Parent=gene-IXO1104_RS12855;Dbxref=Genbank:WP_011259222.1;Name=WP_011259222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466860.1;locus_tag=IXO1104_RS12855;product=ketoacyl-ACP synthase III;protein_id=WP_011259222.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2783284 2784057 . + . ID=gene-IXO1104_RS12860;Name=IXO1104_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12860;old_locus_tag=IXO1104_12810 NZ_CP047492.1 Protein Homology CDS 2783284 2784057 . + 0 ID=cds-WP_011408681.1;Parent=gene-IXO1104_RS12860;Dbxref=Genbank:WP_011408681.1;Name=WP_011408681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373659.1;locus_tag=IXO1104_RS12860;product=SDR family oxidoreductase;protein_id=WP_011408681.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2784054 2784806 . + . ID=gene-IXO1104_RS12865;Name=IXO1104_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12865;old_locus_tag=IXO1104_12815 NZ_CP047492.1 Protein Homology CDS 2784054 2784806 . + 0 ID=cds-WP_011259224.1;Parent=gene-IXO1104_RS12865;Dbxref=Genbank:WP_011259224.1;Name=WP_011259224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302783.1;locus_tag=IXO1104_RS12865;product=SDR family oxidoreductase;protein_id=WP_011259224.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2784806 2785456 . + . ID=gene-IXO1104_RS12870;Name=IXO1104_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12870;old_locus_tag=IXO1104_12820 NZ_CP047492.1 Protein Homology CDS 2784806 2785456 . + 0 ID=cds-WP_011408682.1;Parent=gene-IXO1104_RS12870;Dbxref=Genbank:WP_011408682.1;Name=WP_011408682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503303.1;locus_tag=IXO1104_RS12870;product=acetyltransferase;protein_id=WP_011408682.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2785460 2786605 . + . ID=gene-IXO1104_RS12875;Name=IXO1104_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12875;old_locus_tag=IXO1104_12825 NZ_CP047492.1 Protein Homology CDS 2785460 2786605 . + 0 ID=cds-WP_011259225.1;Parent=gene-IXO1104_RS12875;Dbxref=Genbank:WP_011259225.1;Name=WP_011259225.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921325.1;locus_tag=IXO1104_RS12875;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_011259225.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2786595 2787218 . + . ID=gene-IXO1104_RS12880;Name=IXO1104_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12880;old_locus_tag=IXO1104_12830 NZ_CP047492.1 Protein Homology CDS 2786595 2787218 . + 0 ID=cds-WP_011259226.1;Parent=gene-IXO1104_RS12880;Dbxref=Genbank:WP_011259226.1;Name=WP_011259226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259226.1;locus_tag=IXO1104_RS12880;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_011259226.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2787215 2788738 . + . ID=gene-IXO1104_RS12885;Name=IXO1104_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12885;old_locus_tag=IXO1104_12835 NZ_CP047492.1 Protein Homology CDS 2787215 2788738 . + 0 ID=cds-WP_075239988.1;Parent=gene-IXO1104_RS12885;Dbxref=Genbank:WP_075239988.1;Name=WP_075239988.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118762.1;locus_tag=IXO1104_RS12885;product=FkbM family methyltransferase;protein_id=WP_075239988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2788900 2792397 . + . ID=gene-IXO1104_RS12890;Name=IXO1104_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12890;old_locus_tag=IXO1104_12840 NZ_CP047492.1 Protein Homology CDS 2788900 2792397 . + 0 ID=cds-WP_012445072.1;Parent=gene-IXO1104_RS12890;Dbxref=Genbank:WP_012445072.1;Name=WP_012445072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158033.1;locus_tag=IXO1104_RS12890;product=glycosyltransferase;protein_id=WP_012445072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2793281 2793652 . + . ID=gene-IXO1104_RS12895;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=IXO1104_RS12895;old_locus_tag=IXO1104_12850 NZ_CP047492.1 Protein Homology CDS 2793281 2793652 . + 0 ID=cds-WP_027703543.1;Parent=gene-IXO1104_RS12895;Dbxref=Genbank:WP_027703543.1;Name=WP_027703543.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997134.1;locus_tag=IXO1104_RS12895;product=flagellar hook-basal body complex protein FliE;protein_id=WP_027703543.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2793666 2795390 . + . ID=gene-IXO1104_RS12900;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=IXO1104_RS12900;old_locus_tag=IXO1104_12855 NZ_CP047492.1 Protein Homology CDS 2793666 2795390 . + 0 ID=cds-WP_011259230.1;Parent=gene-IXO1104_RS12900;Dbxref=Genbank:WP_011259230.1;Name=WP_011259230.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158031.1;locus_tag=IXO1104_RS12900;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_011259230.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2795401 2796390 . + . ID=gene-IXO1104_RS12905;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=IXO1104_RS12905;old_locus_tag=IXO1104_12860 NZ_CP047492.1 Protein Homology CDS 2795401 2796390 . + 0 ID=cds-WP_011408686.1;Parent=gene-IXO1104_RS12905;Dbxref=Genbank:WP_011408686.1;Name=WP_011408686.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158030.1;locus_tag=IXO1104_RS12905;product=flagellar motor switch protein FliG;protein_id=WP_011408686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2796387 2797007 . + . ID=gene-IXO1104_RS12910;Name=IXO1104_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12910;old_locus_tag=IXO1104_12865 NZ_CP047492.1 Protein Homology CDS 2796387 2797007 . + 0 ID=cds-WP_011408687.1;Parent=gene-IXO1104_RS12910;Dbxref=Genbank:WP_011408687.1;Name=WP_011408687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850279.1;locus_tag=IXO1104_RS12910;product=FliH/SctL family protein;protein_id=WP_011408687.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2797004 2798380 . + . ID=gene-IXO1104_RS12915;Name=IXO1104_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12915;old_locus_tag=IXO1104_12870 NZ_CP047492.1 Protein Homology CDS 2797004 2798380 . + 0 ID=cds-WP_011259233.1;Parent=gene-IXO1104_RS12915;Dbxref=Genbank:WP_011259233.1;Name=WP_011259233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904676.1;locus_tag=IXO1104_RS12915;product=FliI/YscN family ATPase;protein_id=WP_011259233.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2798384 2798839 . + . ID=gene-IXO1104_RS12920;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS12920;old_locus_tag=IXO1104_12875 NZ_CP047492.1 Protein Homology CDS 2798384 2798839 . + 0 ID=cds-WP_011259234.1;Parent=gene-IXO1104_RS12920;Dbxref=Genbank:WP_011259234.1;Name=WP_011259234.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158028.1;locus_tag=IXO1104_RS12920;product=flagellar export protein FliJ;protein_id=WP_011259234.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2798836 2800143 . + . ID=gene-IXO1104_RS12925;Name=IXO1104_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12925;old_locus_tag=IXO1104_12880 NZ_CP047492.1 Protein Homology CDS 2798836 2800143 . + 0 ID=cds-WP_027703544.1;Parent=gene-IXO1104_RS12925;Dbxref=Genbank:WP_027703544.1;Name=WP_027703544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159589.1;locus_tag=IXO1104_RS12925;product=flagellar hook-length control protein FliK;protein_id=WP_027703544.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2800335 2800859 . + . ID=gene-IXO1104_RS12930;Name=IXO1104_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12930;old_locus_tag=IXO1104_12885 NZ_CP047492.1 Protein Homology CDS 2800335 2800859 . + 0 ID=cds-WP_011259236.1;Parent=gene-IXO1104_RS12930;Dbxref=Genbank:WP_011259236.1;Name=WP_011259236.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917978.1;locus_tag=IXO1104_RS12930;product=flagellar basal body-associated FliL family protein;protein_id=WP_011259236.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2800870 2801883 . + . ID=gene-IXO1104_RS12935;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=IXO1104_RS12935;old_locus_tag=IXO1104_12890 NZ_CP047492.1 Protein Homology CDS 2800870 2801883 . + 0 ID=cds-WP_011259237.1;Parent=gene-IXO1104_RS12935;Dbxref=Genbank:WP_011259237.1;Name=WP_011259237.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302238.1;locus_tag=IXO1104_RS12935;product=flagellar motor switch protein FliM;protein_id=WP_011259237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2801880 2802218 . + . ID=gene-IXO1104_RS12940;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=IXO1104_RS12940;old_locus_tag=IXO1104_12895 NZ_CP047492.1 Protein Homology CDS 2801880 2802218 . + 0 ID=cds-WP_011259238.1;Parent=gene-IXO1104_RS12940;Dbxref=Genbank:WP_011259238.1;Name=WP_011259238.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507674.1;locus_tag=IXO1104_RS12940;product=flagellar motor switch protein FliN;protein_id=WP_011259238.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2802224 2802631 . + . ID=gene-IXO1104_RS12945;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=IXO1104_RS12945;old_locus_tag=IXO1104_12900 NZ_CP047492.1 Protein Homology CDS 2802224 2802631 . + 0 ID=cds-WP_027703545.1;Parent=gene-IXO1104_RS12945;Dbxref=Genbank:WP_027703545.1;Name=WP_027703545.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158024.1;locus_tag=IXO1104_RS12945;product=flagellar biosynthetic protein FliO;protein_id=WP_027703545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2802633 2803478 . + . ID=gene-IXO1104_RS12950;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=IXO1104_RS12950;old_locus_tag=IXO1104_12905 NZ_CP047492.1 Protein Homology CDS 2802633 2803478 . + 0 ID=cds-WP_012445077.1;Parent=gene-IXO1104_RS12950;Dbxref=Genbank:WP_012445077.1;Name=WP_012445077.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373751.1;locus_tag=IXO1104_RS12950;product=flagellar type III secretion system pore protein FliP;protein_id=WP_012445077.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2803892 2804161 . + . ID=gene-IXO1104_RS12955;Name=IXO1104_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12955;old_locus_tag=IXO1104_12910 NZ_CP047492.1 Protein Homology CDS 2803892 2804161 . + 0 ID=cds-WP_005917968.1;Parent=gene-IXO1104_RS12955;Dbxref=Genbank:WP_005917968.1;Name=WP_005917968.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037081.1;locus_tag=IXO1104_RS12955;product=flagellar biosynthetic protein FliQ;protein_id=WP_005917968.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2804174 2804965 . + . ID=gene-IXO1104_RS12960;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=IXO1104_RS12960;old_locus_tag=IXO1104_12915 NZ_CP047492.1 Protein Homology CDS 2804174 2804965 . + 0 ID=cds-WP_011259241.1;Parent=gene-IXO1104_RS12960;Dbxref=Genbank:WP_011259241.1;Name=WP_011259241.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160558.1;locus_tag=IXO1104_RS12960;product=flagellar biosynthetic protein FliR;protein_id=WP_011259241.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2805060 2808032 . + . ID=gene-IXO1104_RS12965;Name=IXO1104_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12965;old_locus_tag=IXO1104_12920 NZ_CP047492.1 Protein Homology CDS 2805060 2808032 . + 0 ID=cds-WP_011259242.1;Parent=gene-IXO1104_RS12965;Dbxref=Genbank:WP_011259242.1;Name=WP_011259242.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259242.1;locus_tag=IXO1104_RS12965;product=diguanylate cyclase;protein_id=WP_011259242.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2808392 2811313 . + . ID=gene-IXO1104_RS12970;Name=IXO1104_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12970;old_locus_tag=IXO1104_12925 NZ_CP047492.1 Protein Homology CDS 2808392 2811313 . + 0 ID=cds-WP_011259243.1;Parent=gene-IXO1104_RS12970;Dbxref=Genbank:WP_011259243.1;Name=WP_011259243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090104.1;locus_tag=IXO1104_RS12970;product=ligand-binding sensor domain-containing diguanylate cyclase;protein_id=WP_011259243.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2811564 2813654 . + . ID=gene-IXO1104_RS12975;Name=IXO1104_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12975;old_locus_tag=IXO1104_12930 NZ_CP047492.1 Protein Homology CDS 2811564 2813654 . + 0 ID=cds-WP_011408691.1;Parent=gene-IXO1104_RS12975;Dbxref=Genbank:WP_011408691.1;Name=WP_011408691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408691.1;locus_tag=IXO1104_RS12975;product=EAL domain-containing protein;protein_id=WP_011408691.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2813891 2815021 . + . ID=gene-IXO1104_RS12980;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=IXO1104_RS12980;old_locus_tag=IXO1104_12935 NZ_CP047492.1 Protein Homology CDS 2813891 2815021 . + 0 ID=cds-WP_075239576.1;Parent=gene-IXO1104_RS12980;Dbxref=Genbank:WP_075239576.1;Name=WP_075239576.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921357.1;locus_tag=IXO1104_RS12980;product=flagellar biosynthesis protein FlhB;protein_id=WP_075239576.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2815039 2817111 . + . ID=gene-IXO1104_RS12985;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=IXO1104_RS12985;old_locus_tag=IXO1104_12940 NZ_CP047492.1 Protein Homology CDS 2815039 2817111 . + 0 ID=cds-WP_027703548.1;Parent=gene-IXO1104_RS12985;Dbxref=Genbank:WP_027703548.1;Name=WP_027703548.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945277.1;locus_tag=IXO1104_RS12985;product=flagellar biosynthesis protein FlhA;protein_id=WP_027703548.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2817696 2819354 . + . ID=gene-IXO1104_RS12990;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=IXO1104_RS12990;old_locus_tag=IXO1104_12945 NZ_CP047492.1 Protein Homology CDS 2817696 2819354 . + 0 ID=cds-WP_075240187.1;Parent=gene-IXO1104_RS12990;Dbxref=Genbank:WP_075240187.1;Name=WP_075240187.1;Ontology_term=GO:0006614,GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154801.1;locus_tag=IXO1104_RS12990;product=flagellar biosynthesis protein FlhF;protein_id=WP_075240187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2819341 2820225 . + . ID=gene-IXO1104_RS12995;Name=IXO1104_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS12995;old_locus_tag=IXO1104_12950 NZ_CP047492.1 Protein Homology CDS 2819341 2820225 . + 0 ID=cds-WP_005918202.1;Parent=gene-IXO1104_RS12995;Dbxref=Genbank:WP_005918202.1;Name=WP_005918202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374294.1;locus_tag=IXO1104_RS12995;product=MinD/ParA family protein;protein_id=WP_005918202.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2820222 2820977 . + . ID=gene-IXO1104_RS13000;Name=IXO1104_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13000;old_locus_tag=IXO1104_12955 NZ_CP047492.1 Protein Homology CDS 2820222 2820977 . + 0 ID=cds-WP_011259248.1;Parent=gene-IXO1104_RS13000;Dbxref=Genbank:WP_011259248.1;Name=WP_011259248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259248.1;locus_tag=IXO1104_RS13000;product=RNA polymerase sigma factor FliA;protein_id=WP_011259248.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2821012 2821404 . + . ID=gene-IXO1104_RS13005;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=IXO1104_RS13005;old_locus_tag=IXO1104_12960 NZ_CP047492.1 Protein Homology CDS 2821012 2821404 . + 0 ID=cds-WP_002813536.1;Parent=gene-IXO1104_RS13005;Dbxref=Genbank:WP_002813536.1;Name=WP_002813536.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507662.1;locus_tag=IXO1104_RS13005;product=chemotaxis response regulator CheY;protein_id=WP_002813536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2821404 2822030 . + . ID=gene-IXO1104_RS13010;Name=IXO1104_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13010;old_locus_tag=IXO1104_12965 NZ_CP047492.1 Protein Homology CDS 2821404 2822030 . + 0 ID=cds-WP_011259249.1;Parent=gene-IXO1104_RS13010;Dbxref=Genbank:WP_011259249.1;Name=WP_011259249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302999.1;locus_tag=IXO1104_RS13010;product=protein phosphatase CheZ;protein_id=WP_011259249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2822033 2823691 . + . ID=gene-IXO1104_RS13015;Name=IXO1104_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13015;old_locus_tag=IXO1104_12970 NZ_CP047492.1 Protein Homology CDS 2822033 2823691 . + 0 ID=cds-WP_011259250.1;Parent=gene-IXO1104_RS13015;Dbxref=Genbank:WP_011259250.1;Name=WP_011259250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304939.1;locus_tag=IXO1104_RS13015;product=chemotaxis protein CheA;protein_id=WP_011259250.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2823887 2824066 . + . ID=gene-IXO1104_RS13020;Name=IXO1104_RS13020;end_range=2824066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13020;old_locus_tag=IXO1104_12975;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2823887 2824066 . + 0 ID=cds-IXO1104_RS13020;Parent=gene-IXO1104_RS13020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2824066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502405.1;locus_tag=IXO1104_RS13020;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2824157 2824789 . + . ID=gene-IXO1104_RS13025;Name=IXO1104_RS13025;end_range=2824789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13025;old_locus_tag=IXO1104_12980;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2824157 2824789 . + 0 ID=cds-IXO1104_RS13025;Parent=gene-IXO1104_RS13025;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2824789,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS13025;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2824881 2825837 . + . ID=gene-IXO1104_RS13030;Name=IXO1104_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13030;old_locus_tag=IXO1104_12985 NZ_CP047492.1 Protein Homology CDS 2824881 2825837 . + 0 ID=cds-WP_041182719.1;Parent=gene-IXO1104_RS13030;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS13030;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2825812 2826102 . - . ID=gene-IXO1104_RS13035;Name=IXO1104_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13035;old_locus_tag=IXO1104_12990 NZ_CP047492.1 GeneMarkS-2+ CDS 2825812 2826102 . - 0 ID=cds-WP_144408323.1;Parent=gene-IXO1104_RS13035;Dbxref=Genbank:WP_144408323.1;Name=WP_144408323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13035;product=hypothetical protein;protein_id=WP_144408323.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2826569 2827887 . + . ID=gene-IXO1104_RS13040;Name=IXO1104_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13040;old_locus_tag=IXO1104_12995;pseudo=true NZ_CP047492.1 Protein Homology CDS 2826569 2827887 . + 0 ID=cds-IXO1104_RS13040;Parent=gene-IXO1104_RS13040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13040;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2828273 2833555 . - . ID=gene-IXO1104_RS13045;Name=IXO1104_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13045;old_locus_tag=IXO1104_13000 NZ_CP047492.1 Protein Homology CDS 2828273 2833555 . - 0 ID=cds-WP_241846800.1;Parent=gene-IXO1104_RS13045;Dbxref=Genbank:WP_241846800.1;Name=WP_241846800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451216.1;locus_tag=IXO1104_RS13045;product=DUF6531 domain-containing protein;protein_id=WP_241846800.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2833585 2838555 . - . ID=gene-IXO1104_RS13050;Name=IXO1104_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13050;old_locus_tag=IXO1104_13005 NZ_CP047492.1 Protein Homology CDS 2833585 2838555 . - 0 ID=cds-WP_164993849.1;Parent=gene-IXO1104_RS13050;Dbxref=Genbank:WP_164993849.1;Name=WP_164993849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013955.2;locus_tag=IXO1104_RS13050;product=IPT/TIG domain-containing protein;protein_id=WP_164993849.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2838646 2839602 . - . ID=gene-IXO1104_RS13055;Name=IXO1104_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13055;old_locus_tag=IXO1104_13010 NZ_CP047492.1 Protein Homology CDS 2838646 2839602 . - 0 ID=cds-WP_041182545.1-8;Parent=gene-IXO1104_RS13055;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS13055;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2839705 2840469 . + . ID=gene-IXO1104_RS13060;Name=IXO1104_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13060;old_locus_tag=IXO1104_13015 NZ_CP047492.1 Protein Homology CDS 2839705 2840469 . + 0 ID=cds-WP_075240681.1;Parent=gene-IXO1104_RS13060;Dbxref=Genbank:WP_075240681.1;Name=WP_075240681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015131.2;locus_tag=IXO1104_RS13060;product=hypothetical protein;protein_id=WP_075240681.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2840418 2841893 . + . ID=gene-IXO1104_RS13065;Name=IXO1104_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13065;old_locus_tag=IXO1104_13020 NZ_CP047492.1 Protein Homology CDS 2840418 2841893 . + 0 ID=cds-WP_263117715.1;Parent=gene-IXO1104_RS13065;Dbxref=Genbank:WP_263117715.1;Name=WP_263117715.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS13065;product=IS5 family transposase;protein_id=WP_263117715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2842035 2842367 . + . ID=gene-IXO1104_RS13070;Name=IXO1104_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13070;old_locus_tag=IXO1104_13025 NZ_CP047492.1 GeneMarkS-2+ CDS 2842035 2842367 . + 0 ID=cds-WP_235428187.1;Parent=gene-IXO1104_RS13070;Dbxref=Genbank:WP_235428187.1;Name=WP_235428187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13070;product=hypothetical protein;protein_id=WP_235428187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2842387 2842866 . - . ID=gene-IXO1104_RS13075;Name=IXO1104_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13075;old_locus_tag=IXO1104_13030 NZ_CP047492.1 GeneMarkS-2+ CDS 2842387 2842866 . - 0 ID=cds-WP_128415342.1;Parent=gene-IXO1104_RS13075;Dbxref=Genbank:WP_128415342.1;Name=WP_128415342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13075;product=hypothetical protein;protein_id=WP_128415342.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2843075 2846143 . - . ID=gene-IXO1104_RS13080;Name=IXO1104_RS13080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13080;old_locus_tag=IXO1104_13035;pseudo=true NZ_CP047492.1 Protein Homology CDS 2843075 2846143 . - 0 ID=cds-IXO1104_RS13080;Parent=gene-IXO1104_RS13080;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503513.1;locus_tag=IXO1104_RS13080;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2846140 2849665 . - . ID=gene-IXO1104_RS13085;Name=IXO1104_RS13085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13085;old_locus_tag=IXO1104_13040;pseudo=true NZ_CP047492.1 Protein Homology CDS 2846140 2849665 . - 0 ID=cds-IXO1104_RS13085;Parent=gene-IXO1104_RS13085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482800.1;locus_tag=IXO1104_RS13085;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2849662 2850795 . - . ID=gene-IXO1104_RS13090;Name=IXO1104_RS13090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13090;old_locus_tag=IXO1104_13045;pseudo=true NZ_CP047492.1 Protein Homology CDS 2849662 2850795 . - 0 ID=cds-IXO1104_RS13090;Parent=gene-IXO1104_RS13090;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090235.1;locus_tag=IXO1104_RS13090;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2851000 2851392 . + . ID=gene-IXO1104_RS13095;Name=IXO1104_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13095;old_locus_tag=IXO1104_13050 NZ_CP047492.1 Protein Homology CDS 2851000 2851392 . + 0 ID=cds-WP_011259260.1;Parent=gene-IXO1104_RS13095;Dbxref=Genbank:WP_011259260.1;Name=WP_011259260.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051309.1;locus_tag=IXO1104_RS13095;product=c-type cytochrome;protein_id=WP_011259260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2851401 2851862 . + . ID=gene-IXO1104_RS13100;Name=IXO1104_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13100;old_locus_tag=IXO1104_13055 NZ_CP047492.1 Protein Homology CDS 2851401 2851862 . + 0 ID=cds-WP_011259261.1;Parent=gene-IXO1104_RS13100;Dbxref=Genbank:WP_011259261.1;Name=WP_011259261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995424.1;locus_tag=IXO1104_RS13100;product=cytochrome c;protein_id=WP_011259261.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2851955 2852030 . + . ID=gene-IXO1104_RS13105;Name=IXO1104_RS13105;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13105;old_locus_tag=IXO1104_13060 NZ_CP047492.1 tRNAscan-SE tRNA 2851955 2852030 . + . ID=rna-IXO1104_RS13105;Parent=gene-IXO1104_RS13105;anticodon=(pos:2851988..2851990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13105;product=tRNA-Ala NZ_CP047492.1 tRNAscan-SE exon 2851955 2852030 . + . ID=exon-IXO1104_RS13105-1;Parent=rna-IXO1104_RS13105;anticodon=(pos:2851988..2851990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13105;product=tRNA-Ala NZ_CP047492.1 RefSeq gene 2852078 2852153 . + . ID=gene-IXO1104_RS13110;Name=IXO1104_RS13110;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13110;old_locus_tag=IXO1104_13065 NZ_CP047492.1 tRNAscan-SE tRNA 2852078 2852153 . + . ID=rna-IXO1104_RS13110;Parent=gene-IXO1104_RS13110;anticodon=(pos:2852112..2852114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13110;product=tRNA-Glu NZ_CP047492.1 tRNAscan-SE exon 2852078 2852153 . + . ID=exon-IXO1104_RS13110-1;Parent=rna-IXO1104_RS13110;anticodon=(pos:2852112..2852114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13110;product=tRNA-Glu NZ_CP047492.1 RefSeq gene 2852913 2852988 . + . ID=gene-IXO1104_RS13115;Name=IXO1104_RS13115;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13115;old_locus_tag=IXO1104_13075 NZ_CP047492.1 tRNAscan-SE tRNA 2852913 2852988 . + . ID=rna-IXO1104_RS13115;Parent=gene-IXO1104_RS13115;anticodon=(pos:2852946..2852948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13115;product=tRNA-Ala NZ_CP047492.1 tRNAscan-SE exon 2852913 2852988 . + . ID=exon-IXO1104_RS13115-1;Parent=rna-IXO1104_RS13115;anticodon=(pos:2852946..2852948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13115;product=tRNA-Ala NZ_CP047492.1 RefSeq gene 2853036 2853111 . + . ID=gene-IXO1104_RS13120;Name=IXO1104_RS13120;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13120;old_locus_tag=IXO1104_13080 NZ_CP047492.1 tRNAscan-SE tRNA 2853036 2853111 . + . ID=rna-IXO1104_RS13120;Parent=gene-IXO1104_RS13120;anticodon=(pos:2853070..2853072);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13120;product=tRNA-Glu NZ_CP047492.1 tRNAscan-SE exon 2853036 2853111 . + . ID=exon-IXO1104_RS13120-1;Parent=rna-IXO1104_RS13120;anticodon=(pos:2853070..2853072);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13120;product=tRNA-Glu NZ_CP047492.1 RefSeq gene 2853416 2853592 . - . ID=gene-IXO1104_RS13125;Name=IXO1104_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13125 NZ_CP047492.1 Protein Homology CDS 2853416 2853592 . - 0 ID=cds-WP_011408705.1;Parent=gene-IXO1104_RS13125;Dbxref=Genbank:WP_011408705.1;Name=WP_011408705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302881.1;locus_tag=IXO1104_RS13125;product=hypothetical protein;protein_id=WP_011408705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2854385 2855350 . + . ID=gene-IXO1104_RS13130;Name=IXO1104_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13130;old_locus_tag=IXO1104_13090 NZ_CP047492.1 Protein Homology CDS 2854385 2855350 . + 0 ID=cds-WP_118886850.1;Parent=gene-IXO1104_RS13130;Dbxref=Genbank:WP_118886850.1;Name=WP_118886850.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS13130;product=IS1595 family transposase;protein_id=WP_118886850.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2855357 2856655 . + . ID=gene-IXO1104_RS13135;Name=IXO1104_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13135;old_locus_tag=IXO1104_13095 NZ_CP047492.1 Protein Homology CDS 2855357 2856655 . + 0 ID=cds-WP_011408707.1;Parent=gene-IXO1104_RS13135;Dbxref=Genbank:WP_011408707.1;Name=WP_011408707.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=IXO1104_RS13135;product=IS701 family transposase;protein_id=WP_011408707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2856824 2858509 . - . ID=gene-IXO1104_RS13140;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=IXO1104_RS13140;old_locus_tag=IXO1104_13100 NZ_CP047492.1 Protein Homology CDS 2856824 2858509 . - 0 ID=cds-WP_011408708.1;Parent=gene-IXO1104_RS13140;Dbxref=Genbank:WP_011408708.1;Name=WP_011408708.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347691.1;locus_tag=IXO1104_RS13140;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_011408708.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2858506 2860242 . - . ID=gene-IXO1104_RS13145;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=IXO1104_RS13145;old_locus_tag=IXO1104_13105 NZ_CP047492.1 Protein Homology CDS 2858506 2860242 . - 0 ID=cds-WP_075239845.1;Parent=gene-IXO1104_RS13145;Dbxref=Genbank:WP_075239845.1;Name=WP_075239845.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydD;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160357.1;locus_tag=IXO1104_RS13145;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_075239845.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2860394 2861838 . + . ID=gene-IXO1104_RS13150;Name=IXO1104_RS13150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13150;old_locus_tag=IXO1104_13110;pseudo=true NZ_CP047492.1 Protein Homology CDS 2860394 2861838 . + 0 ID=cds-IXO1104_RS13150;Parent=gene-IXO1104_RS13150;Note=frameshifted%3B internal stop;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163785.1;locus_tag=IXO1104_RS13150;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2861855 2862185 . + . ID=gene-IXO1104_RS13155;Name=IXO1104_RS13155;end_range=2862185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13155;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2861855 2862185 . + 0 ID=cds-IXO1104_RS13155;Parent=gene-IXO1104_RS13155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=2862185,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347694.1;locus_tag=IXO1104_RS13155;partial=true;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2862185 2862295 . + . ID=gene-IXO1104_RS13160;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=IXO1104_RS13160;old_locus_tag=IXO1104_13125 NZ_CP047492.1 Protein Homology CDS 2862185 2862295 . + 0 ID=cds-WP_011259269.1;Parent=gene-IXO1104_RS13160;Dbxref=Genbank:WP_011259269.1;Name=WP_011259269.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573380.1;locus_tag=IXO1104_RS13160;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_011259269.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2862355 2862431 . + . ID=gene-IXO1104_RS13165;Name=IXO1104_RS13165;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13165;old_locus_tag=IXO1104_13130 NZ_CP047492.1 tRNAscan-SE tRNA 2862355 2862431 . + . ID=rna-IXO1104_RS13165;Parent=gene-IXO1104_RS13165;anticodon=(pos:2862389..2862391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13165;product=tRNA-Pro NZ_CP047492.1 tRNAscan-SE exon 2862355 2862431 . + . ID=exon-IXO1104_RS13165-1;Parent=rna-IXO1104_RS13165;anticodon=(pos:2862389..2862391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13165;product=tRNA-Pro NZ_CP047492.1 RefSeq gene 2862555 2863781 . + . ID=gene-IXO1104_RS13170;Name=IXO1104_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13170;old_locus_tag=IXO1104_13135 NZ_CP047492.1 Protein Homology CDS 2862555 2863781 . + 0 ID=cds-WP_027703616.1;Parent=gene-IXO1104_RS13170;Dbxref=Genbank:WP_027703616.1;Name=WP_027703616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157790.1;locus_tag=IXO1104_RS13170;product=MFS transporter;protein_id=WP_027703616.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2863762 2865675 . - . ID=gene-IXO1104_RS13175;Name=IXO1104_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13175;old_locus_tag=IXO1104_13140 NZ_CP047492.1 Protein Homology CDS 2863762 2865675 . - 0 ID=cds-WP_075240553.1;Parent=gene-IXO1104_RS13175;Dbxref=Genbank:WP_075240553.1;Name=WP_075240553.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259272.1;locus_tag=IXO1104_RS13175;product=CocE/NonD family hydrolase;protein_id=WP_075240553.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2866043 2867287 . - . ID=gene-IXO1104_RS13180;Name=IXO1104_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13180;old_locus_tag=IXO1104_13145 NZ_CP047492.1 Protein Homology CDS 2866043 2867287 . - 0 ID=cds-WP_011408714.1;Parent=gene-IXO1104_RS13180;Dbxref=Genbank:WP_011408714.1;Name=WP_011408714.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972357.1;locus_tag=IXO1104_RS13180;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_011408714.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2867473 2868627 . - . ID=gene-IXO1104_RS13185;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=IXO1104_RS13185;old_locus_tag=IXO1104_13150 NZ_CP047492.1 Protein Homology CDS 2867473 2868627 . - 0 ID=cds-WP_011408715.1;Parent=gene-IXO1104_RS13185;Dbxref=Genbank:WP_011408715.1;Name=WP_011408715.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167565.1;locus_tag=IXO1104_RS13185;product=glutamate 5-kinase;protein_id=WP_011408715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2868641 2868901 . - . ID=gene-IXO1104_RS13190;Name=IXO1104_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13190;old_locus_tag=IXO1104_13155 NZ_CP047492.1 Protein Homology CDS 2868641 2868901 . - 0 ID=cds-WP_011259275.1;Parent=gene-IXO1104_RS13190;Dbxref=Genbank:WP_011259275.1;Name=WP_011259275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347701.1;locus_tag=IXO1104_RS13190;product=YciI family protein;protein_id=WP_011259275.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2868901 2869266 . - . ID=gene-IXO1104_RS13195;Name=IXO1104_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13195;old_locus_tag=IXO1104_13160 NZ_CP047492.1 Protein Homology CDS 2868901 2869266 . - 0 ID=cds-WP_011408716.1;Parent=gene-IXO1104_RS13195;Dbxref=Genbank:WP_011408716.1;Name=WP_011408716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408716.1;locus_tag=IXO1104_RS13195;product=cupin domain-containing protein;protein_id=WP_011408716.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2869266 2870561 . - . ID=gene-IXO1104_RS13200;Name=IXO1104_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13200;old_locus_tag=IXO1104_13165 NZ_CP047492.1 Protein Homology CDS 2869266 2870561 . - 0 ID=cds-WP_011408717.1;Parent=gene-IXO1104_RS13200;Dbxref=Genbank:WP_011408717.1;Name=WP_011408717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116208.1;locus_tag=IXO1104_RS13200;product=argininosuccinate lyase;protein_id=WP_011408717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2870685 2871635 . - . ID=gene-IXO1104_RS13205;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=IXO1104_RS13205;old_locus_tag=IXO1104_13170 NZ_CP047492.1 Protein Homology CDS 2870685 2871635 . - 0 ID=cds-WP_041182650.1;Parent=gene-IXO1104_RS13205;Dbxref=Genbank:WP_041182650.1;Name=WP_041182650.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157784.1;locus_tag=IXO1104_RS13205;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_041182650.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2871632 2872242 . - . ID=gene-IXO1104_RS13210;Name=IXO1104_RS13210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13210;old_locus_tag=IXO1104_13175;pseudo=true NZ_CP047492.1 Protein Homology CDS 2871632 2872242 . - 0 ID=cds-IXO1104_RS13210;Parent=gene-IXO1104_RS13210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382263.1;locus_tag=IXO1104_RS13210;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2872248 2873591 . - . ID=gene-IXO1104_RS13215;Name=IXO1104_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13215;old_locus_tag=IXO1104_13180 NZ_CP047492.1 Protein Homology CDS 2872248 2873591 . - 0 ID=cds-WP_075240554.1;Parent=gene-IXO1104_RS13215;Dbxref=Genbank:WP_075240554.1;Name=WP_075240554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174254.1;locus_tag=IXO1104_RS13215;product=acetylglutamate kinase;protein_id=WP_075240554.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2873631 2874731 . - . ID=gene-IXO1104_RS13220;Name=IXO1104_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13220;old_locus_tag=IXO1104_13185 NZ_CP047492.1 Protein Homology CDS 2873631 2874731 . - 0 ID=cds-WP_011259280.1;Parent=gene-IXO1104_RS13220;Dbxref=Genbank:WP_011259280.1;Name=WP_011259280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237600.1;locus_tag=IXO1104_RS13220;product=acetylornithine deacetylase;protein_id=WP_011259280.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2874724 2875176 . - . ID=gene-IXO1104_RS13225;Name=IXO1104_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13225;old_locus_tag=IXO1104_13190 NZ_CP047492.1 Protein Homology CDS 2874724 2875176 . - 0 ID=cds-WP_075240555.1;Parent=gene-IXO1104_RS13225;Dbxref=Genbank:WP_075240555.1;Name=WP_075240555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913114.1;locus_tag=IXO1104_RS13225;product=GNAT family N-acetyltransferase;protein_id=WP_075240555.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2875418 2876659 . - . ID=gene-IXO1104_RS13230;Name=IXO1104_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13230;old_locus_tag=IXO1104_13195 NZ_CP047492.1 Protein Homology CDS 2875418 2876659 . - 0 ID=cds-WP_011408723.1;Parent=gene-IXO1104_RS13230;Dbxref=Genbank:WP_011408723.1;Name=WP_011408723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300041.1;locus_tag=IXO1104_RS13230;product=argininosuccinate synthase;protein_id=WP_011408723.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2876731 2877756 . - . ID=gene-IXO1104_RS13235;Name=IXO1104_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13235;old_locus_tag=IXO1104_13200 NZ_CP047492.1 Protein Homology CDS 2876731 2877756 . - 0 ID=cds-WP_011259283.1;Parent=gene-IXO1104_RS13235;Dbxref=Genbank:WP_011259283.1;Name=WP_011259283.1;Ontology_term=GO:0042450,GO:0016597,GO:0043857;gbkey=CDS;go_function=amino acid binding|0016597||IEA,N-acetylornithine carbamoyltransferase activity|0043857||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503633.1;locus_tag=IXO1104_RS13235;product=N-acetylornithine carbamoyltransferase;protein_id=WP_011259283.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2878069 2878563 . - . ID=gene-IXO1104_RS13240;Name=IXO1104_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13240;old_locus_tag=IXO1104_13205 NZ_CP047492.1 Protein Homology CDS 2878069 2878563 . - 0 ID=cds-WP_027703614.1;Parent=gene-IXO1104_RS13240;Dbxref=Genbank:WP_027703614.1;Name=WP_027703614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114649.1;locus_tag=IXO1104_RS13240;product=hypothetical protein;protein_id=WP_027703614.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2878740 2880164 . + . ID=gene-IXO1104_RS13245;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=IXO1104_RS13245;old_locus_tag=IXO1104_13210 NZ_CP047492.1 Protein Homology CDS 2878740 2880164 . + 0 ID=cds-WP_012444736.1;Parent=gene-IXO1104_RS13245;Dbxref=Genbank:WP_012444736.1;Name=WP_012444736.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444736.1;locus_tag=IXO1104_RS13245;product=cysteine--tRNA ligase;protein_id=WP_012444736.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2880662 2881099 . + . ID=gene-IXO1104_RS13250;Name=IXO1104_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13250;old_locus_tag=IXO1104_13215 NZ_CP047492.1 Protein Homology CDS 2880662 2881099 . + 0 ID=cds-WP_011408724.1;Parent=gene-IXO1104_RS13250;Dbxref=Genbank:WP_011408724.1;Name=WP_011408724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159960.1;locus_tag=IXO1104_RS13250;product=SufE family protein;protein_id=WP_011408724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2881096 2882346 . + . ID=gene-IXO1104_RS13255;Name=IXO1104_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13255;old_locus_tag=IXO1104_13220 NZ_CP047492.1 Protein Homology CDS 2881096 2882346 . + 0 ID=cds-WP_011259287.1;Parent=gene-IXO1104_RS13255;Dbxref=Genbank:WP_011259287.1;Name=WP_011259287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573410.1;locus_tag=IXO1104_RS13255;product=MFS transporter;protein_id=WP_011259287.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2882414 2883448 . - . ID=gene-IXO1104_RS13260;Name=IXO1104_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13260;old_locus_tag=IXO1104_13225 NZ_CP047492.1 Protein Homology CDS 2882414 2883448 . - 0 ID=cds-WP_228329610.1;Parent=gene-IXO1104_RS13260;Dbxref=Genbank:WP_228329610.1;Name=WP_228329610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259288.1;locus_tag=IXO1104_RS13260;product=S41 family peptidase;protein_id=WP_228329610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2883618 2884106 . - . ID=gene-IXO1104_RS13265;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=IXO1104_RS13265 NZ_CP047492.1 Protein Homology CDS 2883618 2884106 . - 0 ID=cds-WP_011408725.1;Parent=gene-IXO1104_RS13265;Dbxref=Genbank:WP_011408725.1;Name=WP_011408725.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02420.1;locus_tag=IXO1104_RS13265;product=RNA polymerase-binding protein DksA;protein_id=WP_011408725.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2884096 2884731 . + . ID=gene-IXO1104_RS13270;Name=IXO1104_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13270 NZ_CP047492.1 Protein Homology CDS 2884096 2884731 . + 0 ID=cds-WP_198912791.1;Parent=gene-IXO1104_RS13270;Dbxref=Genbank:WP_198912791.1;Name=WP_198912791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162674.1;locus_tag=IXO1104_RS13270;product=hypothetical protein;protein_id=WP_198912791.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2884731 2885018 . + . ID=gene-IXO1104_RS13275;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=IXO1104_RS13275;old_locus_tag=IXO1104_13235 NZ_CP047492.1 Protein Homology CDS 2884731 2885018 . + 0 ID=cds-WP_033013281.1;Parent=gene-IXO1104_RS13275;Dbxref=Genbank:WP_033013281.1;Name=WP_033013281.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347711.1;locus_tag=IXO1104_RS13275;product=membrane protein insertion efficiency factor YidD;protein_id=WP_033013281.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2885015 2886364 . + . ID=gene-IXO1104_RS13280;Name=IXO1104_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13280;old_locus_tag=IXO1104_13240 NZ_CP047492.1 Protein Homology CDS 2885015 2886364 . + 0 ID=cds-WP_075239837.1;Parent=gene-IXO1104_RS13280;Dbxref=Genbank:WP_075239837.1;Name=WP_075239837.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302579.1;locus_tag=IXO1104_RS13280;product=dihydroorotase;protein_id=WP_075239837.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2886364 2887203 . + . ID=gene-IXO1104_RS13285;Name=IXO1104_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13285;old_locus_tag=IXO1104_13245 NZ_CP047492.1 Protein Homology CDS 2886364 2887203 . + 0 ID=cds-WP_075240556.1;Parent=gene-IXO1104_RS13285;Dbxref=Genbank:WP_075240556.1;Name=WP_075240556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159191.1;locus_tag=IXO1104_RS13285;product=M23 family metallopeptidase;protein_id=WP_075240556.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2887551 2888023 . + . ID=gene-IXO1104_RS13290;Name=IXO1104_RS13290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13290;old_locus_tag=IXO1104_13250;partial=true;pseudo=true;start_range=.,2887551 NZ_CP047492.1 Protein Homology CDS 2887551 2888023 . + 0 ID=cds-IXO1104_RS13290;Parent=gene-IXO1104_RS13290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156117.1;locus_tag=IXO1104_RS13290;partial=true;product=ethanolamine ammonia-lyase light chain EutC;pseudo=true;start_range=.,2887551;transl_table=11 NZ_CP047492.1 RefSeq gene 2888078 2888341 . - . ID=gene-IXO1104_RS13295;Name=IXO1104_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13295;old_locus_tag=IXO1104_13255 NZ_CP047492.1 Protein Homology CDS 2888078 2888341 . - 0 ID=cds-WP_011259294.1;Parent=gene-IXO1104_RS13295;Dbxref=Genbank:WP_011259294.1;Name=WP_011259294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156118.1;locus_tag=IXO1104_RS13295;product=hypothetical protein;protein_id=WP_011259294.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2888713 2889201 . - . ID=gene-IXO1104_RS13300;Name=IXO1104_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13300;old_locus_tag=IXO1104_13260 NZ_CP047492.1 Protein Homology CDS 2888713 2889201 . - 0 ID=cds-WP_012444728.1;Parent=gene-IXO1104_RS13300;Dbxref=Genbank:WP_012444728.1;Name=WP_012444728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486918.1;locus_tag=IXO1104_RS13300;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012444728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2889425 2890744 . - . ID=gene-IXO1104_RS13305;Name=IXO1104_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13305;old_locus_tag=IXO1104_13265 NZ_CP047492.1 Protein Homology CDS 2889425 2890744 . - 0 ID=cds-WP_129593080.1;Parent=gene-IXO1104_RS13305;Dbxref=Genbank:WP_129593080.1;Name=WP_129593080.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13305;product=IS701 family transposase;protein_id=WP_129593080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2890881 2891849 . + . ID=gene-IXO1104_RS13310;Name=IXO1104_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13310;old_locus_tag=IXO1104_13270 NZ_CP047492.1 Protein Homology CDS 2890881 2891849 . + 0 ID=cds-WP_011258802.1-8;Parent=gene-IXO1104_RS13310;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS13310;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2892049 2892792 . + . ID=gene-IXO1104_RS13315;Name=IXO1104_RS13315;end_range=2892792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13315;old_locus_tag=IXO1104_13275;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2892049 2892792 . + 0 ID=cds-IXO1104_RS13315;Parent=gene-IXO1104_RS13315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2892792,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13315;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2892834 2893632 . + . ID=gene-IXO1104_RS13320;Name=IXO1104_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13320;old_locus_tag=IXO1104_13280 NZ_CP047492.1 Protein Homology CDS 2892834 2893105 . + 0 ID=cds-WP_094187777.1;Parent=gene-IXO1104_RS13320;Dbxref=Genbank:WP_094187777.1;Name=WP_094187777.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS13320;product=IS5 family transposase;protein_id=WP_094187777.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2893104 2893632 . + 1 ID=cds-WP_094187777.1;Parent=gene-IXO1104_RS13320;Dbxref=Genbank:WP_094187777.1;Name=WP_094187777.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS13320;product=IS5 family transposase;protein_id=WP_094187777.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2893642 2894217 . + . ID=gene-IXO1104_RS13325;Name=IXO1104_RS13325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13325;old_locus_tag=IXO1104_13285;partial=true;pseudo=true;start_range=.,2893642 NZ_CP047492.1 Protein Homology CDS 2893642 2894217 . + 0 ID=cds-IXO1104_RS13325;Parent=gene-IXO1104_RS13325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13325;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,2893642;transl_table=11 NZ_CP047492.1 RefSeq gene 2894577 2895758 . + . ID=gene-IXO1104_RS13330;Name=IXO1104_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13330;old_locus_tag=IXO1104_13290 NZ_CP047492.1 Protein Homology CDS 2894577 2895758 . + 0 ID=cds-WP_012444725.1;Parent=gene-IXO1104_RS13330;Dbxref=Genbank:WP_012444725.1;Name=WP_012444725.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573436.1;locus_tag=IXO1104_RS13330;product=putative acyl-CoA thioester hydrolase;protein_id=WP_012444725.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2896171 2897062 . - . ID=gene-IXO1104_RS13335;Name=IXO1104_RS13335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13335;old_locus_tag=IXO1104_13295;pseudo=true NZ_CP047492.1 Protein Homology CDS 2896171 2897062 . - 0 ID=cds-IXO1104_RS13335;Parent=gene-IXO1104_RS13335;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS13335;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2897343 2899013 . + . ID=gene-IXO1104_RS13340;Name=IXO1104_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13340;old_locus_tag=IXO1104_13300 NZ_CP047492.1 Protein Homology CDS 2897343 2899013 . + 0 ID=cds-WP_041182896.1;Parent=gene-IXO1104_RS13340;Dbxref=Genbank:WP_041182896.1;Name=WP_041182896.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486074.1;locus_tag=IXO1104_RS13340;product=glycosyl hydrolase family 28 protein;protein_id=WP_041182896.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2899230 2899919 . - . ID=gene-IXO1104_RS13345;Name=IXO1104_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13345;old_locus_tag=IXO1104_13305 NZ_CP047492.1 Protein Homology CDS 2899230 2899919 . - 0 ID=cds-WP_011259304.1;Parent=gene-IXO1104_RS13345;Dbxref=Genbank:WP_011259304.1;Name=WP_011259304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156122.1;locus_tag=IXO1104_RS13345;product=phytoene synthase;protein_id=WP_011259304.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2899948 2900652 . - . ID=gene-IXO1104_RS13350;Name=IXO1104_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13350;old_locus_tag=IXO1104_13310 NZ_CP047492.1 Protein Homology CDS 2899948 2900652 . - 0 ID=cds-WP_011408736.1;Parent=gene-IXO1104_RS13350;Dbxref=Genbank:WP_011408736.1;Name=WP_011408736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408736.1;locus_tag=IXO1104_RS13350;product=phosphoglycolate phosphatase;protein_id=WP_011408736.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2900726 2901445 . - . ID=gene-IXO1104_RS13355;Name=IXO1104_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13355;old_locus_tag=IXO1104_13315 NZ_CP047492.1 Protein Homology CDS 2900726 2901445 . - 0 ID=cds-WP_011259306.1;Parent=gene-IXO1104_RS13355;Dbxref=Genbank:WP_011259306.1;Name=WP_011259306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372777.1;locus_tag=IXO1104_RS13355;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_011259306.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2901476 2902813 . - . ID=gene-IXO1104_RS13360;Name=IXO1104_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13360;old_locus_tag=IXO1104_13320 NZ_CP047492.1 Protein Homology CDS 2901476 2902813 . - 0 ID=cds-WP_027703270.1;Parent=gene-IXO1104_RS13360;Dbxref=Genbank:WP_027703270.1;Name=WP_027703270.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159956.1;locus_tag=IXO1104_RS13360;product=TRZ/ATZ family hydrolase;protein_id=WP_027703270.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2902833 2903636 . - . ID=gene-IXO1104_RS13365;Name=IXO1104_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13365;old_locus_tag=IXO1104_13325 NZ_CP047492.1 Protein Homology CDS 2902833 2903636 . - 0 ID=cds-WP_041182450.1;Parent=gene-IXO1104_RS13365;Dbxref=Genbank:WP_041182450.1;Name=WP_041182450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090359.1;locus_tag=IXO1104_RS13365;product=hypothetical protein;protein_id=WP_041182450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2903828 2904394 . - . ID=gene-IXO1104_RS13370;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=IXO1104_RS13370;old_locus_tag=IXO1104_13330 NZ_CP047492.1 Protein Homology CDS 2903828 2904394 . - 0 ID=cds-WP_002802373.1;Parent=gene-IXO1104_RS13370;Dbxref=Genbank:WP_002802373.1;Name=WP_002802373.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301003.1;locus_tag=IXO1104_RS13370;product=elongation factor P;protein_id=WP_002802373.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2904496 2905524 . + . ID=gene-IXO1104_RS13375;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS13375;old_locus_tag=IXO1104_13335 NZ_CP047492.1 Protein Homology CDS 2904496 2905524 . + 0 ID=cds-WP_075239847.1;Parent=gene-IXO1104_RS13375;Dbxref=Genbank:WP_075239847.1;Name=WP_075239847.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408738.1;locus_tag=IXO1104_RS13375;product=EF-P beta-lysylation protein EpmB;protein_id=WP_075239847.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2905743 2907860 . - . ID=gene-IXO1104_RS13380;Name=IXO1104_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13380;old_locus_tag=IXO1104_13340 NZ_CP047492.1 Protein Homology CDS 2905743 2907860 . - 0 ID=cds-WP_011259310.1;Parent=gene-IXO1104_RS13380;Dbxref=Genbank:WP_011259310.1;Name=WP_011259310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168504.1;locus_tag=IXO1104_RS13380;product=EAL domain-containing protein;protein_id=WP_011259310.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2907857 2908786 . - . ID=gene-IXO1104_RS13385;Name=IXO1104_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13385;old_locus_tag=IXO1104_13345 NZ_CP047492.1 Protein Homology CDS 2907857 2908786 . - 0 ID=cds-WP_011259311.1;Parent=gene-IXO1104_RS13385;Dbxref=Genbank:WP_011259311.1;Name=WP_011259311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850179.1;locus_tag=IXO1104_RS13385;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_011259311.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2908838 2909602 . - . ID=gene-IXO1104_RS13390;Name=IXO1104_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13390;old_locus_tag=IXO1104_13350 NZ_CP047492.1 Protein Homology CDS 2908838 2909602 . - 0 ID=cds-WP_011408739.1;Parent=gene-IXO1104_RS13390;Dbxref=Genbank:WP_011408739.1;Name=WP_011408739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486059.1;locus_tag=IXO1104_RS13390;product=RNA methyltransferase;protein_id=WP_011408739.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2909721 2910554 . + . ID=gene-IXO1104_RS13395;Name=IXO1104_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13395;old_locus_tag=IXO1104_13355 NZ_CP047492.1 Protein Homology CDS 2909721 2910554 . + 0 ID=cds-WP_011408740.1;Parent=gene-IXO1104_RS13395;Dbxref=Genbank:WP_011408740.1;Name=WP_011408740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913068.1;locus_tag=IXO1104_RS13395;product=inositol monophosphatase;protein_id=WP_011408740.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2910807 2911418 . - . ID=gene-IXO1104_RS13400;Name=IXO1104_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13400;old_locus_tag=IXO1104_13360 NZ_CP047492.1 Protein Homology CDS 2910807 2911418 . - 0 ID=cds-WP_011259314.1;Parent=gene-IXO1104_RS13400;Dbxref=Genbank:WP_011259314.1;Name=WP_011259314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037422.1;locus_tag=IXO1104_RS13400;product=superoxide dismutase;protein_id=WP_011259314.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2911673 2912113 . + . ID=gene-IXO1104_RS13405;Name=IXO1104_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13405;old_locus_tag=IXO1104_13365 NZ_CP047492.1 Protein Homology CDS 2911673 2912113 . + 0 ID=cds-WP_011259315.1;Parent=gene-IXO1104_RS13405;Dbxref=Genbank:WP_011259315.1;Name=WP_011259315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372742.1;locus_tag=IXO1104_RS13405;product=ribonuclease;protein_id=WP_011259315.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2912110 2912535 . + . ID=gene-IXO1104_RS13410;Name=IXO1104_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13410;old_locus_tag=IXO1104_13370 NZ_CP047492.1 Protein Homology CDS 2912110 2912535 . + 0 ID=cds-WP_011259316.1;Parent=gene-IXO1104_RS13410;Dbxref=Genbank:WP_011259316.1;Name=WP_011259316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486050.1;locus_tag=IXO1104_RS13410;product=barstar family protein;protein_id=WP_011259316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2912597 2912672 . + . ID=gene-IXO1104_RS13415;Name=IXO1104_RS13415;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS13415;old_locus_tag=IXO1104_13375 NZ_CP047492.1 cmsearch ncRNA 2912597 2912672 . + . ID=rna-IXO1104_RS13415;Parent=gene-IXO1104_RS13415;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13415;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2912597 2912672 . + . ID=exon-IXO1104_RS13415-1;Parent=rna-IXO1104_RS13415;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13415;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2912984 2914879 . - . ID=gene-IXO1104_RS13420;Name=IXO1104_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13420;old_locus_tag=IXO1104_13380 NZ_CP047492.1 Protein Homology CDS 2912984 2914879 . - 0 ID=cds-WP_027703271.1;Parent=gene-IXO1104_RS13420;Dbxref=Genbank:WP_027703271.1;Name=WP_027703271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=IXO1104_RS13420;product=ATP-binding cassette domain-containing protein;protein_id=WP_027703271.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2914969 2916345 . + . ID=gene-IXO1104_RS13425;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS13425;old_locus_tag=IXO1104_13385 NZ_CP047492.1 Protein Homology CDS 2914969 2916345 . + 0 ID=cds-WP_011259318.1;Parent=gene-IXO1104_RS13425;Dbxref=Genbank:WP_011259318.1;Name=WP_011259318.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090365.1;locus_tag=IXO1104_RS13425;product=ATP-dependent RNA helicase DbpA;protein_id=WP_011259318.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2916448 2917008 . - . ID=gene-IXO1104_RS13430;Name=IXO1104_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13430;old_locus_tag=IXO1104_13390 NZ_CP047492.1 Protein Homology CDS 2916448 2917008 . - 0 ID=cds-WP_012444712.1;Parent=gene-IXO1104_RS13430;Dbxref=Genbank:WP_012444712.1;Name=WP_012444712.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965724.1;locus_tag=IXO1104_RS13430;product=adenine phosphoribosyltransferase;protein_id=WP_012444712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2917106 2918662 . - . ID=gene-IXO1104_RS13435;Name=IXO1104_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13435;old_locus_tag=IXO1104_13395 NZ_CP047492.1 Protein Homology CDS 2917106 2918662 . - 0 ID=cds-WP_011408741.1;Parent=gene-IXO1104_RS13435;Dbxref=Genbank:WP_011408741.1;Name=WP_011408741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408741.1;locus_tag=IXO1104_RS13435;product=YdiU family protein;protein_id=WP_011408741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2918946 2919821 . + . ID=gene-IXO1104_RS13440;Name=IXO1104_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13440;old_locus_tag=IXO1104_13400 NZ_CP047492.1 Protein Homology CDS 2918946 2919821 . + 0 ID=cds-WP_011408742.1;Parent=gene-IXO1104_RS13440;Dbxref=Genbank:WP_011408742.1;Name=WP_011408742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116192.1;locus_tag=IXO1104_RS13440;product=alpha/beta hydrolase;protein_id=WP_011408742.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2920022 2920720 . - . ID=gene-IXO1104_RS13445;Name=IXO1104_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13445;old_locus_tag=IXO1104_13405 NZ_CP047492.1 Protein Homology CDS 2920022 2920720 . - 0 ID=cds-WP_075240433.1;Parent=gene-IXO1104_RS13445;Dbxref=Genbank:WP_075240433.1;Name=WP_075240433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156137.1;locus_tag=IXO1104_RS13445;product=glutathione S-transferase;protein_id=WP_075240433.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2920892 2921089 . - . ID=gene-IXO1104_RS13450;Name=IXO1104_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13450;old_locus_tag=IXO1104_13410 NZ_CP047492.1 Protein Homology CDS 2920892 2921089 . - 0 ID=cds-WP_202806268.1;Parent=gene-IXO1104_RS13450;Dbxref=Genbank:WP_202806268.1;Name=WP_202806268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156138.1;locus_tag=IXO1104_RS13450;product=cold-shock protein;protein_id=WP_202806268.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2921370 2921855 . + . ID=gene-IXO1104_RS13455;Name=IXO1104_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13455;old_locus_tag=IXO1104_13415 NZ_CP047492.1 Protein Homology CDS 2921370 2921855 . + 0 ID=cds-WP_011408745.1;Parent=gene-IXO1104_RS13455;Dbxref=Genbank:WP_011408745.1;Name=WP_011408745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408745.1;locus_tag=IXO1104_RS13455;product=YaiI/YqxD family protein;protein_id=WP_011408745.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2921926 2922474 . + . ID=gene-IXO1104_RS13460;Name=IXO1104_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13460;old_locus_tag=IXO1104_13420 NZ_CP047492.1 Protein Homology CDS 2921926 2922474 . + 0 ID=cds-WP_011259325.1;Parent=gene-IXO1104_RS13460;Dbxref=Genbank:WP_011259325.1;Name=WP_011259325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503075.1;locus_tag=IXO1104_RS13460;product=YaeQ family protein;protein_id=WP_011259325.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2922471 2923652 . + . ID=gene-IXO1104_RS13465;Name=IXO1104_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13465;old_locus_tag=IXO1104_13425 NZ_CP047492.1 Protein Homology CDS 2922471 2923652 . + 0 ID=cds-WP_011259326.1;Parent=gene-IXO1104_RS13465;Dbxref=Genbank:WP_011259326.1;Name=WP_011259326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923170.1;locus_tag=IXO1104_RS13465;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011259326.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2923876 2925945 . + . ID=gene-IXO1104_RS13470;Name=IXO1104_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13470;old_locus_tag=IXO1104_13430 NZ_CP047492.1 Protein Homology CDS 2923876 2925945 . + 0 ID=cds-WP_012444707.1;Parent=gene-IXO1104_RS13470;Dbxref=Genbank:WP_012444707.1;Name=WP_012444707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037435.1;locus_tag=IXO1104_RS13470;product=EAL domain-containing protein;protein_id=WP_012444707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2926045 2926923 . - . ID=gene-IXO1104_RS13475;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=IXO1104_RS13475;old_locus_tag=IXO1104_13435 NZ_CP047492.1 Protein Homology CDS 2926045 2926923 . - 0 ID=cds-WP_012444706.1;Parent=gene-IXO1104_RS13475;Dbxref=Genbank:WP_012444706.1;Name=WP_012444706.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037436.1;locus_tag=IXO1104_RS13475;product=protease HtpX;protein_id=WP_012444706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2927021 2927920 . + . ID=gene-IXO1104_RS13480;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=IXO1104_RS13480;old_locus_tag=IXO1104_13440 NZ_CP047492.1 Protein Homology CDS 2927021 2927920 . + 0 ID=cds-WP_012444705.1;Parent=gene-IXO1104_RS13480;Dbxref=Genbank:WP_012444705.1;Name=WP_012444705.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301023.1;locus_tag=IXO1104_RS13480;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_012444705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2928008 2928748 . + . ID=gene-IXO1104_RS13485;Name=IXO1104_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13485;old_locus_tag=IXO1104_13445 NZ_CP047492.1 Protein Homology CDS 2928008 2928748 . + 0 ID=cds-WP_011408747.1;Parent=gene-IXO1104_RS13485;Dbxref=Genbank:WP_011408747.1;Name=WP_011408747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090372.1;locus_tag=IXO1104_RS13485;product=beta-ketoacyl-ACP reductase;protein_id=WP_011408747.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2928908 2929483 . + . ID=gene-IXO1104_RS13490;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=IXO1104_RS13490;old_locus_tag=IXO1104_13450 NZ_CP047492.1 Protein Homology CDS 2928908 2929483 . + 0 ID=cds-WP_027703272.1;Parent=gene-IXO1104_RS13490;Dbxref=Genbank:WP_027703272.1;Name=WP_027703272.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486016.1;locus_tag=IXO1104_RS13490;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_027703272.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2929657 2930628 . - . ID=gene-IXO1104_RS13495;Name=IXO1104_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13495;old_locus_tag=IXO1104_13455 NZ_CP047492.1 Protein Homology CDS 2929657 2930628 . - 0 ID=cds-WP_011408749.1;Parent=gene-IXO1104_RS13495;Dbxref=Genbank:WP_011408749.1;Name=WP_011408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116190.1;locus_tag=IXO1104_RS13495;product=TraB/GumN family protein;protein_id=WP_011408749.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2930662 2931615 . - . ID=gene-IXO1104_RS13500;Name=IXO1104_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13500;old_locus_tag=IXO1104_13460 NZ_CP047492.1 Protein Homology CDS 2930662 2931615 . - 0 ID=cds-WP_027703274.1;Parent=gene-IXO1104_RS13500;Dbxref=Genbank:WP_027703274.1;Name=WP_027703274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913042.1;locus_tag=IXO1104_RS13500;product=DUF1684 domain-containing protein;protein_id=WP_027703274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2931615 2933492 . - . ID=gene-IXO1104_RS13505;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=IXO1104_RS13505;old_locus_tag=IXO1104_13465 NZ_CP047492.1 Protein Homology CDS 2931615 2933492 . - 0 ID=cds-WP_011259334.1;Parent=gene-IXO1104_RS13505;Dbxref=Genbank:WP_011259334.1;Name=WP_011259334.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486008.1;locus_tag=IXO1104_RS13505;product=DNA mismatch repair endonuclease MutL;protein_id=WP_011259334.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2933630 2935345 . - . ID=gene-IXO1104_RS13510;Name=IXO1104_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13510;old_locus_tag=IXO1104_13470 NZ_CP047492.1 Protein Homology CDS 2933630 2935345 . - 0 ID=cds-WP_027703275.1;Parent=gene-IXO1104_RS13510;Dbxref=Genbank:WP_027703275.1;Name=WP_027703275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159951.1;locus_tag=IXO1104_RS13510;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_027703275.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2935416 2935916 . - . ID=gene-IXO1104_RS13515;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=IXO1104_RS13515;old_locus_tag=IXO1104_13475 NZ_CP047492.1 Protein Homology CDS 2935416 2935916 . - 0 ID=cds-WP_011259336.1;Parent=gene-IXO1104_RS13515;Dbxref=Genbank:WP_011259336.1;Name=WP_011259336.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156148.1;locus_tag=IXO1104_RS13515;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_011259336.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2935913 2937400 . - . ID=gene-IXO1104_RS13520;Name=IXO1104_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13520;old_locus_tag=IXO1104_13480 NZ_CP047492.1 Protein Homology CDS 2935913 2937400 . - 0 ID=cds-WP_011259337.1;Parent=gene-IXO1104_RS13520;Dbxref=Genbank:WP_011259337.1;Name=WP_011259337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965703.1;locus_tag=IXO1104_RS13520;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_011259337.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2937425 2938492 . + . ID=gene-IXO1104_RS13525;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=IXO1104_RS13525;old_locus_tag=IXO1104_13485 NZ_CP047492.1 Protein Homology CDS 2937425 2938492 . + 0 ID=cds-WP_011408752.1;Parent=gene-IXO1104_RS13525;Dbxref=Genbank:WP_011408752.1;Name=WP_011408752.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051562.1;locus_tag=IXO1104_RS13525;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_011408752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2938638 2939975 . + . ID=gene-IXO1104_RS13530;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=IXO1104_RS13530;old_locus_tag=IXO1104_13490 NZ_CP047492.1 Protein Homology CDS 2938638 2939975 . + 0 ID=cds-WP_011408753.1;Parent=gene-IXO1104_RS13530;Dbxref=Genbank:WP_011408753.1;Name=WP_011408753.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372660.1;locus_tag=IXO1104_RS13530;product=exodeoxyribonuclease VII large subunit;protein_id=WP_011408753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2940271 2941533 . - . ID=gene-IXO1104_RS13535;Name=IXO1104_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13535;old_locus_tag=IXO1104_13495 NZ_CP047492.1 Protein Homology CDS 2940271 2941533 . - 0 ID=cds-WP_011259340.1;Parent=gene-IXO1104_RS13535;Dbxref=Genbank:WP_011259340.1;Name=WP_011259340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503060.1;locus_tag=IXO1104_RS13535;product=virulence factor;protein_id=WP_011259340.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2941750 2942497 . - . ID=gene-IXO1104_RS13540;Name=IXO1104_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13540;old_locus_tag=IXO1104_13500 NZ_CP047492.1 Protein Homology CDS 2942288 2942497 . - 0 ID=cds-WP_206737644.1;Parent=gene-IXO1104_RS13540;Dbxref=Genbank:WP_206737644.1;Name=WP_206737644.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1104_RS13540;product=IS5 family transposase;protein_id=WP_206737644.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 2941750 2942286 . - 0 ID=cds-WP_206737644.1;Parent=gene-IXO1104_RS13540;Dbxref=Genbank:WP_206737644.1;Name=WP_206737644.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1104_RS13540;product=IS5 family transposase;protein_id=WP_206737644.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2942814 2944649 . - . ID=gene-IXO1104_RS13545;Name=IXO1104_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13545;old_locus_tag=IXO1104_13505 NZ_CP047492.1 Protein Homology CDS 2942814 2944649 . - 0 ID=cds-WP_041182165.1;Parent=gene-IXO1104_RS13545;Dbxref=Genbank:WP_041182165.1;Name=WP_041182165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112352.1;locus_tag=IXO1104_RS13545;product=formylglycine-generating enzyme family protein;protein_id=WP_041182165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2944638 2944713 . - . ID=gene-IXO1104_RS13550;Name=IXO1104_RS13550;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS13550;old_locus_tag=IXO1104_13510 NZ_CP047492.1 cmsearch ncRNA 2944638 2944713 . - . ID=rna-IXO1104_RS13550;Parent=gene-IXO1104_RS13550;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13550;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2944638 2944713 . - . ID=exon-IXO1104_RS13550-1;Parent=rna-IXO1104_RS13550;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13550;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 2944921 2946012 . + . ID=gene-IXO1104_RS13555;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=IXO1104_RS13555;old_locus_tag=IXO1104_13515 NZ_CP047492.1 Protein Homology CDS 2944921 2946012 . + 0 ID=cds-WP_011408756.1;Parent=gene-IXO1104_RS13555;Dbxref=Genbank:WP_011408756.1;Name=WP_011408756.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408756.1;locus_tag=IXO1104_RS13555;product=ribonuclease D;protein_id=WP_011408756.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2946109 2946425 . - . ID=gene-IXO1104_RS13560;Name=IXO1104_RS13560;end_range=2946425,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13560;old_locus_tag=IXO1104_13520;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2946109 2946425 . - 0 ID=cds-IXO1104_RS13560;Parent=gene-IXO1104_RS13560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2946425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159207.1;locus_tag=IXO1104_RS13560;partial=true;product=ATP-dependent DNA ligase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2946707 2946883 . - . ID=gene-IXO1104_RS13565;Name=IXO1104_RS13565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13565;pseudo=true NZ_CP047492.1 Protein Homology CDS 2946707 2946883 . - 0 ID=cds-IXO1104_RS13565;Parent=gene-IXO1104_RS13565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503050.1;locus_tag=IXO1104_RS13565;product=DUF3606 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2947105 2947506 . + . ID=gene-IXO1104_RS13570;Name=IXO1104_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13570;old_locus_tag=IXO1104_13530 NZ_CP047492.1 Protein Homology CDS 2947105 2947506 . + 0 ID=cds-WP_011259345.1;Parent=gene-IXO1104_RS13570;Dbxref=Genbank:WP_011259345.1;Name=WP_011259345.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485983.1;locus_tag=IXO1104_RS13570;product=H-NS histone family protein;protein_id=WP_011259345.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2947599 2947674 . + . ID=gene-IXO1104_RS13575;Name=IXO1104_RS13575;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS13575;old_locus_tag=IXO1104_13535 NZ_CP047492.1 tRNAscan-SE tRNA 2947599 2947674 . + . ID=rna-IXO1104_RS13575;Parent=gene-IXO1104_RS13575;anticodon=(pos:2947632..2947634);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13575;product=tRNA-Ala NZ_CP047492.1 tRNAscan-SE exon 2947599 2947674 . + . ID=exon-IXO1104_RS13575-1;Parent=rna-IXO1104_RS13575;anticodon=(pos:2947632..2947634);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS13575;product=tRNA-Ala NZ_CP047492.1 RefSeq gene 2947937 2948065 . - . ID=gene-IXO1104_RS13580;Name=IXO1104_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13580 NZ_CP047492.1 GeneMarkS-2+ CDS 2947937 2948065 . - 0 ID=cds-WP_012444694.1;Parent=gene-IXO1104_RS13580;Dbxref=Genbank:WP_012444694.1;Name=WP_012444694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13580;product=hypothetical protein;protein_id=WP_012444694.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2948034 2948153 . - . ID=gene-IXO1104_RS13585;Name=IXO1104_RS13585;end_range=2948153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13585;partial=true;pseudo=true;start_range=.,2948034 NZ_CP047492.1 Protein Homology CDS 2948034 2948153 . - 0 ID=cds-IXO1104_RS13585;Parent=gene-IXO1104_RS13585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2948153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611760.1;locus_tag=IXO1104_RS13585;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2948034;transl_table=11 NZ_CP047492.1 RefSeq gene 2948370 2948624 . - . ID=gene-IXO1104_RS13590;Name=IXO1104_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13590;old_locus_tag=IXO1104_13545 NZ_CP047492.1 GeneMarkS-2+ CDS 2948370 2948624 . - 0 ID=cds-WP_223293127.1;Parent=gene-IXO1104_RS13590;Dbxref=Genbank:WP_223293127.1;Name=WP_223293127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13590;product=hypothetical protein;protein_id=WP_223293127.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2948693 2948827 . - . ID=gene-IXO1104_RS13595;Name=IXO1104_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13595;old_locus_tag=IXO1104_13550 NZ_CP047492.1 Protein Homology CDS 2948693 2948827 . - 0 ID=cds-WP_011408758.1;Parent=gene-IXO1104_RS13595;Dbxref=Genbank:WP_011408758.1;Name=WP_011408758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051575.1;locus_tag=IXO1104_RS13595;product=hypothetical protein;protein_id=WP_011408758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2948820 2949074 . - . ID=gene-IXO1104_RS13600;Name=IXO1104_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13600 NZ_CP047492.1 GeneMarkS-2+ CDS 2948820 2949074 . - 0 ID=cds-WP_198912806.1;Parent=gene-IXO1104_RS13600;Dbxref=Genbank:WP_198912806.1;Name=WP_198912806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13600;product=hypothetical protein;protein_id=WP_198912806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2949151 2949402 . - . ID=gene-IXO1104_RS13605;Name=IXO1104_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13605;old_locus_tag=IXO1104_13555 NZ_CP047492.1 Protein Homology CDS 2949151 2949402 . - 0 ID=cds-WP_229001948.1;Parent=gene-IXO1104_RS13605;Dbxref=Genbank:WP_229001948.1;Name=WP_229001948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=IXO1104_RS13605;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_229001948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2949429 2949707 . - . ID=gene-IXO1104_RS13610;Name=IXO1104_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13610;old_locus_tag=IXO1104_13560 NZ_CP047492.1 Protein Homology CDS 2949429 2949707 . - 0 ID=cds-WP_011408759.1;Parent=gene-IXO1104_RS13610;Dbxref=Genbank:WP_011408759.1;Name=WP_011408759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408759.1;locus_tag=IXO1104_RS13610;product=CopG family ribbon-helix-helix protein;protein_id=WP_011408759.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2949903 2950247 . - . ID=gene-IXO1104_RS13615;Name=IXO1104_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13615;old_locus_tag=IXO1104_13565 NZ_CP047492.1 GeneMarkS-2+ CDS 2949903 2950247 . - 0 ID=cds-WP_198912817.1;Parent=gene-IXO1104_RS13615;Dbxref=Genbank:WP_198912817.1;Name=WP_198912817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13615;product=hypothetical protein;protein_id=WP_198912817.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2950642 2951598 . - . ID=gene-IXO1104_RS13620;Name=IXO1104_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13620;old_locus_tag=IXO1104_13575 NZ_CP047492.1 Protein Homology CDS 2950642 2951598 . - 0 ID=cds-WP_011407237.1-8;Parent=gene-IXO1104_RS13620;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS13620;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2952211 2953395 . - . ID=gene-IXO1104_RS13625;Name=IXO1104_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13625;old_locus_tag=IXO1104_13580 NZ_CP047492.1 Protein Homology CDS 2952211 2953395 . - 0 ID=cds-WP_011408397.1;Parent=gene-IXO1104_RS13625;Dbxref=Genbank:WP_011408397.1;Name=WP_011408397.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS13625;product=IS256 family transposase;protein_id=WP_011408397.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2953976 2954941 . + . ID=gene-IXO1104_RS13630;Name=IXO1104_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13630;old_locus_tag=IXO1104_13585 NZ_CP047492.1 Protein Homology CDS 2953976 2954941 . + 0 ID=cds-WP_109181970.1-2;Parent=gene-IXO1104_RS13630;Dbxref=Genbank:WP_109181970.1;Name=WP_109181970.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS13630;product=IS1595 family transposase;protein_id=WP_109181970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2955091 2955648 . + . ID=gene-IXO1104_RS13635;Name=IXO1104_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13635;old_locus_tag=IXO1104_13590 NZ_CP047492.1 Protein Homology CDS 2955091 2955648 . + 0 ID=cds-WP_011259349.1;Parent=gene-IXO1104_RS13635;Dbxref=Genbank:WP_011259349.1;Name=WP_011259349.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944546.1;locus_tag=IXO1104_RS13635;product=DNA-3-methyladenine glycosylase;protein_id=WP_011259349.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2955600 2957212 . - . ID=gene-IXO1104_RS13640;Name=IXO1104_RS13640;end_range=2957212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13640;old_locus_tag=IXO1104_13595;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2955600 2957212 . - 0 ID=cds-IXO1104_RS13640;Parent=gene-IXO1104_RS13640;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2957212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463325.1;locus_tag=IXO1104_RS13640;partial=true;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2957444 2959279 . - . ID=gene-IXO1104_RS13645;Name=IXO1104_RS13645;end_range=2959279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13645;old_locus_tag=IXO1104_13600;partial=true;pseudo=true;start_range=.,2957444 NZ_CP047492.1 Protein Homology CDS 2957444 2959279 . - 0 ID=cds-IXO1104_RS13645;Parent=gene-IXO1104_RS13645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2959279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090390.1;locus_tag=IXO1104_RS13645;partial=true;product=helicase-related protein;pseudo=true;start_range=.,2957444;transl_table=11 NZ_CP047492.1 RefSeq gene 2959506 2959850 . + . ID=gene-IXO1104_RS13650;Name=IXO1104_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13650;old_locus_tag=IXO1104_13605 NZ_CP047492.1 Protein Homology CDS 2959506 2959850 . + 0 ID=cds-WP_042465594.1;Parent=gene-IXO1104_RS13650;Dbxref=Genbank:WP_042465594.1;Name=WP_042465594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382418.1;locus_tag=IXO1104_RS13650;product=DUF3301 domain-containing protein;protein_id=WP_042465594.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2960061 2960387 . - . ID=gene-IXO1104_RS13655;Name=IXO1104_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13655;old_locus_tag=IXO1104_13610 NZ_CP047492.1 Protein Homology CDS 2960061 2960387 . - 0 ID=cds-WP_011408764.1;Parent=gene-IXO1104_RS13655;Dbxref=Genbank:WP_011408764.1;Name=WP_011408764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503015.1;locus_tag=IXO1104_RS13655;product=hypothetical protein;protein_id=WP_011408764.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2960420 2960860 . - . ID=gene-IXO1104_RS13660;Name=IXO1104_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13660;old_locus_tag=IXO1104_13615 NZ_CP047492.1 Protein Homology CDS 2960420 2960860 . - 0 ID=cds-WP_011259352.1;Parent=gene-IXO1104_RS13660;Dbxref=Genbank:WP_011259352.1;Name=WP_011259352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901612.1;locus_tag=IXO1104_RS13660;product=ClpXP protease specificity-enhancing factor;protein_id=WP_011259352.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2960939 2961574 . - . ID=gene-IXO1104_RS13665;Name=IXO1104_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13665;old_locus_tag=IXO1104_13620 NZ_CP047492.1 Protein Homology CDS 2960939 2961574 . - 0 ID=cds-WP_011259353.1;Parent=gene-IXO1104_RS13665;Dbxref=Genbank:WP_011259353.1;Name=WP_011259353.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810483.1;locus_tag=IXO1104_RS13665;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_011259353.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2961967 2962725 . - . ID=gene-IXO1104_RS13670;Name=IXO1104_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13670;old_locus_tag=IXO1104_13625 NZ_CP047492.1 Protein Homology CDS 2961967 2962725 . - 0 ID=cds-WP_027703625.1;Parent=gene-IXO1104_RS13670;Dbxref=Genbank:WP_027703625.1;Name=WP_027703625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113706.1;locus_tag=IXO1104_RS13670;product=cytochrome c1;protein_id=WP_027703625.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2962718 2963977 . - . ID=gene-IXO1104_RS13675;Name=IXO1104_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13675;old_locus_tag=IXO1104_13630 NZ_CP047492.1 Protein Homology CDS 2962718 2963977 . - 0 ID=cds-WP_011259355.1;Parent=gene-IXO1104_RS13675;Dbxref=Genbank:WP_011259355.1;Name=WP_011259355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965674.1;locus_tag=IXO1104_RS13675;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_011259355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2963977 2964621 . - . ID=gene-IXO1104_RS13680;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=IXO1104_RS13680;old_locus_tag=IXO1104_13635 NZ_CP047492.1 Protein Homology CDS 2963977 2964621 . - 0 ID=cds-WP_011259356.1;Parent=gene-IXO1104_RS13680;Dbxref=Genbank:WP_011259356.1;Name=WP_011259356.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382428.1;locus_tag=IXO1104_RS13680;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_011259356.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2965151 2966137 . - . ID=gene-IXO1104_RS13685;Name=IXO1104_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13685;old_locus_tag=IXO1104_13640 NZ_CP047492.1 Protein Homology CDS 2965151 2966137 . - 0 ID=cds-WP_075239989.1;Parent=gene-IXO1104_RS13685;Dbxref=Genbank:WP_075239989.1;Name=WP_075239989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171389.1;locus_tag=IXO1104_RS13685;product=lytic transglycosylase domain-containing protein;protein_id=WP_075239989.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2966251 2966325 . + . ID=gene-IXO1104_RS13690;Name=IXO1104_RS13690;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS13690;old_locus_tag=IXO1104_13645 NZ_CP047492.1 cmsearch ncRNA 2966251 2966325 . + . ID=rna-IXO1104_RS13690;Parent=gene-IXO1104_RS13690;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13690;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 2966251 2966325 . + . ID=exon-IXO1104_RS13690-1;Parent=rna-IXO1104_RS13690;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS13690;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 2966350 2967264 . - . ID=gene-IXO1104_RS13695;Name=IXO1104_RS13695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13695;old_locus_tag=IXO1104_13650;partial=true;pseudo=true;start_range=.,2966350 NZ_CP047492.1 Protein Homology CDS 2966350 2967264 . - 0 ID=cds-IXO1104_RS13695;Parent=gene-IXO1104_RS13695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156170.1;locus_tag=IXO1104_RS13695;partial=true;product=WYL domain-containing protein;pseudo=true;start_range=.,2966350;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2967398 2968034 . + . ID=gene-IXO1104_RS13700;Name=IXO1104_RS13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13700;old_locus_tag=IXO1104_13655;pseudo=true NZ_CP047492.1 Protein Homology CDS 2967398 2968034 . + 0 ID=cds-IXO1104_RS13700;Parent=gene-IXO1104_RS13700;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382438.1;locus_tag=IXO1104_RS13700;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2968073 2969527 . + . ID=gene-IXO1104_RS13705;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=IXO1104_RS13705;old_locus_tag=IXO1104_13660 NZ_CP047492.1 Protein Homology CDS 2968073 2969527 . + 0 ID=cds-WP_041182646.1;Parent=gene-IXO1104_RS13705;Dbxref=Genbank:WP_041182646.1;Name=WP_041182646.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182646.1;locus_tag=IXO1104_RS13705;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_041182646.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2969951 2970937 . + . ID=gene-IXO1104_RS13710;Name=IXO1104_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13710;old_locus_tag=IXO1104_13665 NZ_CP047492.1 Protein Homology CDS 2969951 2970937 . + 0 ID=cds-WP_011408767.1;Parent=gene-IXO1104_RS13710;Dbxref=Genbank:WP_011408767.1;Name=WP_011408767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408767.1;locus_tag=IXO1104_RS13710;product=PhoH family protein;protein_id=WP_011408767.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2971349 2972011 . + . ID=gene-IXO1104_RS13715;Name=IXO1104_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13715;old_locus_tag=IXO1104_13670 NZ_CP047492.1 Protein Homology CDS 2971349 2972011 . + 0 ID=cds-WP_075240641.1;Parent=gene-IXO1104_RS13715;Dbxref=Genbank:WP_075240641.1;Name=WP_075240641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051605.1;locus_tag=IXO1104_RS13715;product=hypothetical protein;protein_id=WP_075240641.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2972066 2972551 . + . ID=gene-IXO1104_RS13720;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=IXO1104_RS13720;old_locus_tag=IXO1104_13675 NZ_CP047492.1 Protein Homology CDS 2972066 2972551 . + 0 ID=cds-WP_027703624.1;Parent=gene-IXO1104_RS13720;Dbxref=Genbank:WP_027703624.1;Name=WP_027703624.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901623.1;locus_tag=IXO1104_RS13720;product=rRNA maturation RNase YbeY;protein_id=WP_027703624.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2972551 2973069 . + . ID=gene-IXO1104_RS13725;Name=IXO1104_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13725;old_locus_tag=IXO1104_13680 NZ_CP047492.1 Protein Homology CDS 2972551 2973069 . + 0 ID=cds-WP_011408769.1;Parent=gene-IXO1104_RS13725;Dbxref=Genbank:WP_011408769.1;Name=WP_011408769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347782.1;locus_tag=IXO1104_RS13725;product=hypothetical protein;protein_id=WP_011408769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2973164 2974042 . + . ID=gene-IXO1104_RS13730;Name=IXO1104_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13730;old_locus_tag=IXO1104_13685 NZ_CP047492.1 Protein Homology CDS 2973164 2974042 . + 0 ID=cds-WP_012444677.1;Parent=gene-IXO1104_RS13730;Dbxref=Genbank:WP_012444677.1;Name=WP_012444677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488337.1;locus_tag=IXO1104_RS13730;product=CBS domain-containing protein;protein_id=WP_012444677.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2974039 2975319 . + . ID=gene-IXO1104_RS13735;Name=IXO1104_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13735;old_locus_tag=IXO1104_13690 NZ_CP047492.1 Protein Homology CDS 2974039 2975319 . + 0 ID=cds-WP_011259366.1;Parent=gene-IXO1104_RS13735;Dbxref=Genbank:WP_011259366.1;Name=WP_011259366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382454.1;locus_tag=IXO1104_RS13735;product=DUF4105 domain-containing protein;protein_id=WP_011259366.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2975335 2976336 . + . ID=gene-IXO1104_RS13740;Name=IXO1104_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13740;old_locus_tag=IXO1104_13695 NZ_CP047492.1 Protein Homology CDS 2975335 2976336 . + 0 ID=cds-WP_011259367.1;Parent=gene-IXO1104_RS13740;Dbxref=Genbank:WP_011259367.1;Name=WP_011259367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488333.1;locus_tag=IXO1104_RS13740;product=magnesium and cobalt transport protein CorA;protein_id=WP_011259367.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2976488 2977852 . - . ID=gene-IXO1104_RS13745;Name=IXO1104_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13745;old_locus_tag=IXO1104_13700 NZ_CP047492.1 Protein Homology CDS 2976488 2977852 . - 0 ID=cds-WP_033013286.1;Parent=gene-IXO1104_RS13745;Dbxref=Genbank:WP_033013286.1;Name=WP_033013286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488331.1;locus_tag=IXO1104_RS13745;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_033013286.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2978242 2978517 . + . ID=gene-IXO1104_RS13750;Name=IXO1104_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13750;old_locus_tag=IXO1104_13705 NZ_CP047492.1 Protein Homology CDS 2978242 2978517 . + 0 ID=cds-WP_012444675.1;Parent=gene-IXO1104_RS13750;Dbxref=Genbank:WP_012444675.1;Name=WP_012444675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037480.1;locus_tag=IXO1104_RS13750;product=hypothetical protein;protein_id=WP_012444675.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2978673 2979522 . - . ID=gene-IXO1104_RS13755;Name=IXO1104_RS13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13755;old_locus_tag=IXO1104_13710;pseudo=true NZ_CP047492.1 Protein Homology CDS 2978673 2979522 . - 0 ID=cds-IXO1104_RS13755;Parent=gene-IXO1104_RS13755;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302219.1;locus_tag=IXO1104_RS13755;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2979519 2979935 . - . ID=gene-IXO1104_RS13760;Name=IXO1104_RS13760;end_range=2979935,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13760;old_locus_tag=IXO1104_13715;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 2979519 2979935 . - 0 ID=cds-IXO1104_RS13760;Parent=gene-IXO1104_RS13760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0016020;end_range=2979935,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849508.1;locus_tag=IXO1104_RS13760;partial=true;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2979817 2981064 . - . ID=gene-IXO1104_RS13765;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=IXO1104_RS13765;old_locus_tag=IXO1104_13720 NZ_CP047492.1 Protein Homology CDS 2979817 2981064 . - 0 ID=cds-WP_075240166.1;Parent=gene-IXO1104_RS13765;Dbxref=Genbank:WP_075240166.1;Name=WP_075240166.1;Ontology_term=GO:0015846,GO:0005524,GO:0015417,GO:0009898,GO:0055052;gbkey=CDS;gene=potA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408776.1;locus_tag=IXO1104_RS13765;product=polyamine ABC transporter ATP-binding protein;protein_id=WP_075240166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2981210 2982703 . - . ID=gene-IXO1104_RS13770;Name=IXO1104_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13770;old_locus_tag=IXO1104_13725 NZ_CP047492.1 Protein Homology CDS 2981210 2982703 . - 0 ID=cds-WP_075240640.1;Parent=gene-IXO1104_RS13770;Dbxref=Genbank:WP_075240640.1;Name=WP_075240640.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156183.1;locus_tag=IXO1104_RS13770;product=efflux transporter outer membrane subunit;protein_id=WP_075240640.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2982708 2984294 . - . ID=gene-IXO1104_RS13775;Name=IXO1104_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13775;old_locus_tag=IXO1104_13730 NZ_CP047492.1 Protein Homology CDS 2982708 2984294 . - 0 ID=cds-WP_011408778.1;Parent=gene-IXO1104_RS13775;Dbxref=Genbank:WP_011408778.1;Name=WP_011408778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302223.1;locus_tag=IXO1104_RS13775;product=multidrug efflux MFS transporter;protein_id=WP_011408778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2984291 2985493 . - . ID=gene-IXO1104_RS13780;Name=IXO1104_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13780;old_locus_tag=IXO1104_13735 NZ_CP047492.1 Protein Homology CDS 2984291 2985493 . - 0 ID=cds-WP_011408779.1;Parent=gene-IXO1104_RS13780;Dbxref=Genbank:WP_011408779.1;Name=WP_011408779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159217.1;locus_tag=IXO1104_RS13780;product=HlyD family secretion protein;protein_id=WP_011408779.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2986000 2987319 . + . ID=gene-IXO1104_RS13785;Name=IXO1104_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13785;old_locus_tag=IXO1104_13740 NZ_CP047492.1 Protein Homology CDS 2986000 2987319 . + 0 ID=cds-WP_115877355.1;Parent=gene-IXO1104_RS13785;Dbxref=Genbank:WP_115877355.1;Name=WP_115877355.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13785;product=IS701 family transposase;protein_id=WP_115877355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2987623 2989008 . - . ID=gene-IXO1104_RS13790;Name=IXO1104_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13790;old_locus_tag=IXO1104_13745 NZ_CP047492.1 Protein Homology CDS 2987623 2989008 . - 0 ID=cds-WP_012444669.1;Parent=gene-IXO1104_RS13790;Dbxref=Genbank:WP_012444669.1;Name=WP_012444669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508026.1;locus_tag=IXO1104_RS13790;product=glutamine synthetase family protein;protein_id=WP_012444669.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 2989015 2989771 . - . ID=gene-IXO1104_RS13795;Name=IXO1104_RS13795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13795;old_locus_tag=IXO1104_13750;pseudo=true NZ_CP047492.1 Protein Homology CDS 2989015 2989771 . - 0 ID=cds-IXO1104_RS13795;Parent=gene-IXO1104_RS13795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488313.1;locus_tag=IXO1104_RS13795;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 2989916 2991295 . + . ID=gene-IXO1104_RS13800;Name=IXO1104_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13800;old_locus_tag=IXO1104_13755 NZ_CP047492.1 Protein Homology CDS 2989916 2991295 . + 0 ID=cds-WP_012444667.1;Parent=gene-IXO1104_RS13800;Dbxref=Genbank:WP_012444667.1;Name=WP_012444667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347795.1;locus_tag=IXO1104_RS13800;product=glutamine synthetase family protein;protein_id=WP_012444667.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2991292 2992611 . + . ID=gene-IXO1104_RS13805;Name=IXO1104_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13805;old_locus_tag=IXO1104_13760 NZ_CP047492.1 Protein Homology CDS 2991292 2992611 . + 0 ID=cds-WP_178385169.1;Parent=gene-IXO1104_RS13805;Dbxref=Genbank:WP_178385169.1;Name=WP_178385169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851516.1;locus_tag=IXO1104_RS13805;product=FAD-binding oxidoreductase;protein_id=WP_178385169.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2992694 2993992 . + . ID=gene-IXO1104_RS13810;Name=IXO1104_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13810;old_locus_tag=IXO1104_13765 NZ_CP047492.1 Protein Homology CDS 2992694 2993992 . + 0 ID=cds-WP_011259379.1;Parent=gene-IXO1104_RS13810;Dbxref=Genbank:WP_011259379.1;Name=WP_011259379.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112538.1;locus_tag=IXO1104_RS13810;product=diguanylate cyclase;protein_id=WP_011259379.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2994300 2995580 . - . ID=gene-IXO1104_RS13815;Name=IXO1104_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13815;old_locus_tag=IXO1104_13770 NZ_CP047492.1 Protein Homology CDS 2994300 2995580 . - 0 ID=cds-WP_027703942.1;Parent=gene-IXO1104_RS13815;Dbxref=Genbank:WP_027703942.1;Name=WP_027703942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301209.1;locus_tag=IXO1104_RS13815;product=MHS family MFS transporter;protein_id=WP_027703942.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2995886 2996164 . - . ID=gene-IXO1104_RS13820;Name=IXO1104_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13820;old_locus_tag=IXO1104_13775 NZ_CP047492.1 Protein Homology CDS 2995886 2996164 . - 0 ID=cds-WP_011408785.1;Parent=gene-IXO1104_RS13820;Dbxref=Genbank:WP_011408785.1;Name=WP_011408785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301208.1;locus_tag=IXO1104_RS13820;product=hypothetical protein;protein_id=WP_011408785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2996154 2998502 . - . ID=gene-IXO1104_RS13825;Name=IXO1104_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13825;old_locus_tag=IXO1104_13780 NZ_CP047492.1 Protein Homology CDS 2996154 2998502 . - 0 ID=cds-WP_011259381.1;Parent=gene-IXO1104_RS13825;Dbxref=Genbank:WP_011259381.1;Name=WP_011259381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915320.1;locus_tag=IXO1104_RS13825;product=FdhF/YdeP family oxidoreductase;protein_id=WP_011259381.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2998499 2999344 . - . ID=gene-IXO1104_RS13830;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=IXO1104_RS13830;old_locus_tag=IXO1104_13785 NZ_CP047492.1 Protein Homology CDS 2998499 2999344 . - 0 ID=cds-WP_011259382.1;Parent=gene-IXO1104_RS13830;Dbxref=Genbank:WP_011259382.1;Name=WP_011259382.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156198.1;locus_tag=IXO1104_RS13830;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_011259382.1;transl_table=11 NZ_CP047492.1 RefSeq gene 2999351 3001045 . - . ID=gene-IXO1104_RS13835;Name=IXO1104_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13835;old_locus_tag=IXO1104_13790 NZ_CP047492.1 Protein Homology CDS 2999351 3001045 . - 0 ID=cds-WP_027703776.1;Parent=gene-IXO1104_RS13835;Dbxref=Genbank:WP_027703776.1;Name=WP_027703776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915324.1;locus_tag=IXO1104_RS13835;product=OFA family MFS transporter;protein_id=WP_027703776.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3001575 3002927 . + . ID=gene-IXO1104_RS13840;Name=IXO1104_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13840;old_locus_tag=IXO1104_13800 NZ_CP047492.1 Protein Homology CDS 3001575 3002927 . + 0 ID=cds-WP_012444660.1;Parent=gene-IXO1104_RS13840;Dbxref=Genbank:WP_012444660.1;Name=WP_012444660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259384.1;locus_tag=IXO1104_RS13840;product=aspartate aminotransferase family protein;protein_id=WP_012444660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3002988 3006125 . - . ID=gene-IXO1104_RS13845;Name=IXO1104_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13845;old_locus_tag=IXO1104_13805 NZ_CP047492.1 Protein Homology CDS 3002988 3006125 . - 0 ID=cds-WP_027703775.1;Parent=gene-IXO1104_RS13845;Dbxref=Genbank:WP_027703775.1;Name=WP_027703775.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376945.1;locus_tag=IXO1104_RS13845;product=AAA domain-containing protein;protein_id=WP_027703775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3006292 3007146 . + . ID=gene-IXO1104_RS13850;Name=IXO1104_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13850;old_locus_tag=IXO1104_13810 NZ_CP047492.1 Protein Homology CDS 3006292 3007146 . + 0 ID=cds-WP_075240385.1;Parent=gene-IXO1104_RS13850;Dbxref=Genbank:WP_075240385.1;Name=WP_075240385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915330.1;locus_tag=IXO1104_RS13850;product=plasmid replication/partition related protein;protein_id=WP_075240385.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3007317 3008621 . + . ID=gene-IXO1104_RS13855;Name=IXO1104_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13855;old_locus_tag=IXO1104_13815 NZ_CP047492.1 Protein Homology CDS 3007317 3008621 . + 0 ID=cds-WP_027703774.1;Parent=gene-IXO1104_RS13855;Dbxref=Genbank:WP_027703774.1;Name=WP_027703774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408789.1;locus_tag=IXO1104_RS13855;product=DUF445 family protein;protein_id=WP_027703774.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3008763 3012857 . + . ID=gene-IXO1104_RS13860;Name=IXO1104_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13860;old_locus_tag=IXO1104_13820 NZ_CP047492.1 Protein Homology CDS 3008763 3012857 . + 0 ID=cds-WP_027703773.1;Parent=gene-IXO1104_RS13860;Dbxref=Genbank:WP_027703773.1;Name=WP_027703773.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962777.1;locus_tag=IXO1104_RS13860;product=response regulator;protein_id=WP_027703773.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3012891 3013877 . + . ID=gene-IXO1104_RS13865;Name=IXO1104_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13865;old_locus_tag=IXO1104_13825 NZ_CP047492.1 Protein Homology CDS 3012891 3013877 . + 0 ID=cds-WP_027703772.1;Parent=gene-IXO1104_RS13865;Dbxref=Genbank:WP_027703772.1;Name=WP_027703772.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259389.1;locus_tag=IXO1104_RS13865;product=response regulator;protein_id=WP_027703772.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3014002 3014985 . - . ID=gene-IXO1104_RS13870;Name=IXO1104_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13870;old_locus_tag=IXO1104_13830 NZ_CP047492.1 Protein Homology CDS 3014002 3014985 . - 0 ID=cds-WP_012444654.1;Parent=gene-IXO1104_RS13870;Dbxref=Genbank:WP_012444654.1;Name=WP_012444654.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS13870;product=IS5 family transposase;protein_id=WP_012444654.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3015434 3020458 . - . ID=gene-IXO1104_RS13875;Name=IXO1104_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13875;old_locus_tag=IXO1104_13835 NZ_CP047492.1 Protein Homology CDS 3015434 3020458 . - 0 ID=cds-WP_012444652.1;Parent=gene-IXO1104_RS13875;Dbxref=Genbank:WP_012444652.1;Name=WP_012444652.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051626.1;locus_tag=IXO1104_RS13875;product=NAD-glutamate dehydrogenase;protein_id=WP_012444652.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3020736 3021395 . + . ID=gene-IXO1104_RS13880;Name=IXO1104_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13880;old_locus_tag=IXO1104_13840 NZ_CP047492.1 Protein Homology CDS 3020736 3021395 . + 0 ID=cds-WP_027703873.1;Parent=gene-IXO1104_RS13880;Dbxref=Genbank:WP_027703873.1;Name=WP_027703873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917360.1;locus_tag=IXO1104_RS13880;product=TetR/AcrR family transcriptional regulator;protein_id=WP_027703873.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3021410 3022714 . + . ID=gene-IXO1104_RS13885;Name=IXO1104_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13885;old_locus_tag=IXO1104_13845 NZ_CP047492.1 Protein Homology CDS 3021410 3022714 . + 0 ID=cds-WP_012444649.1;Parent=gene-IXO1104_RS13885;Dbxref=Genbank:WP_012444649.1;Name=WP_012444649.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171867.1;locus_tag=IXO1104_RS13885;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012444649.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3022727 3025897 . + . ID=gene-IXO1104_RS13890;Name=IXO1104_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13890;old_locus_tag=IXO1104_13850 NZ_CP047492.1 Protein Homology CDS 3022727 3025897 . + 0 ID=cds-WP_012444648.1;Parent=gene-IXO1104_RS13890;Dbxref=Genbank:WP_012444648.1;Name=WP_012444648.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997967.1;locus_tag=IXO1104_RS13890;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012444648.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3026012 3026854 . + . ID=gene-IXO1104_RS13895;Name=IXO1104_RS13895;end_range=3026854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13895;old_locus_tag=IXO1104_13855;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3026012 3026854 . + 0 ID=cds-IXO1104_RS13895;Parent=gene-IXO1104_RS13895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3026854,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1;locus_tag=IXO1104_RS13895;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3026873 3027838 . - . ID=gene-IXO1104_RS13900;Name=IXO1104_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13900;old_locus_tag=IXO1104_13860 NZ_CP047492.1 Protein Homology CDS 3026873 3027838 . - 0 ID=cds-WP_263113769.1;Parent=gene-IXO1104_RS13900;Dbxref=Genbank:WP_263113769.1;Name=WP_263113769.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS13900;product=IS1595-like element ISXo5 family transposase;protein_id=WP_263113769.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3027936 3028403 . + . ID=gene-IXO1104_RS13905;Name=IXO1104_RS13905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13905;old_locus_tag=IXO1104_13865;partial=true;pseudo=true;start_range=.,3027936 NZ_CP047492.1 Protein Homology CDS 3027936 3028403 . + 0 ID=cds-IXO1104_RS13905;Parent=gene-IXO1104_RS13905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1;locus_tag=IXO1104_RS13905;partial=true;product=transposase;pseudo=true;start_range=.,3027936;transl_table=11 NZ_CP047492.1 RefSeq gene 3028545 3029540 . - . ID=gene-IXO1104_RS13910;Name=IXO1104_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13910;old_locus_tag=IXO1104_13870 NZ_CP047492.1 Protein Homology CDS 3028545 3029540 . - 0 ID=cds-WP_011408798.1;Parent=gene-IXO1104_RS13910;Dbxref=Genbank:WP_011408798.1;Name=WP_011408798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161385.1;locus_tag=IXO1104_RS13910;product=LacI family transcriptional regulator;protein_id=WP_011408798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3029701 3032217 . + . ID=gene-IXO1104_RS13915;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=IXO1104_RS13915;old_locus_tag=IXO1104_13875 NZ_CP047492.1 Protein Homology CDS 3029701 3032217 . + 0 ID=cds-WP_075239925.1;Parent=gene-IXO1104_RS13915;Dbxref=Genbank:WP_075239925.1;Name=WP_075239925.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051629.1;locus_tag=IXO1104_RS13915;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_075239925.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3032214 3033170 . + . ID=gene-IXO1104_RS13920;Name=IXO1104_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13920;old_locus_tag=IXO1104_13880 NZ_CP047492.1 Protein Homology CDS 3032214 3033170 . + 0 ID=cds-WP_011259401.1;Parent=gene-IXO1104_RS13920;Dbxref=Genbank:WP_011259401.1;Name=WP_011259401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969646.1;locus_tag=IXO1104_RS13920;product=1-phosphofructokinase family hexose kinase;protein_id=WP_011259401.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3033329 3035071 . + . ID=gene-IXO1104_RS13925;Name=IXO1104_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13925;old_locus_tag=IXO1104_13885 NZ_CP047492.1 Protein Homology CDS 3033329 3035071 . + 0 ID=cds-WP_011259402.1;Parent=gene-IXO1104_RS13925;Dbxref=Genbank:WP_011259402.1;Name=WP_011259402.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993427.1;locus_tag=IXO1104_RS13925;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_011259402.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3035249 3036526 . + . ID=gene-IXO1104_RS13930;Name=IXO1104_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13930;old_locus_tag=IXO1104_13890 NZ_CP047492.1 Protein Homology CDS 3035249 3036526 . + 0 ID=cds-WP_012444645.1;Parent=gene-IXO1104_RS13930;Dbxref=Genbank:WP_012444645.1;Name=WP_012444645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237567.1;locus_tag=IXO1104_RS13930;product=carbohydrate porin;protein_id=WP_012444645.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3036856 3037119 . - . ID=gene-IXO1104_RS13935;Name=IXO1104_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13935;old_locus_tag=IXO1104_13895 NZ_CP047492.1 GeneMarkS-2+ CDS 3036856 3037119 . - 0 ID=cds-WP_228329607.1;Parent=gene-IXO1104_RS13935;Dbxref=Genbank:WP_228329607.1;Name=WP_228329607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS13935;product=hypothetical protein;protein_id=WP_228329607.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3037193 3038161 . + . ID=gene-IXO1104_RS13940;Name=IXO1104_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13940;old_locus_tag=IXO1104_13900 NZ_CP047492.1 Protein Homology CDS 3037193 3038161 . + 0 ID=cds-WP_011258802.1-9;Parent=gene-IXO1104_RS13940;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS13940;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3038374 3039692 . - . ID=gene-IXO1104_RS13945;Name=IXO1104_RS13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS13945;old_locus_tag=IXO1104_13905;pseudo=true NZ_CP047492.1 Protein Homology CDS 3038374 3039692 . - 0 ID=cds-IXO1104_RS13945;Parent=gene-IXO1104_RS13945;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13945;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3039932 3042277 . - . ID=gene-IXO1104_RS13950;Name=IXO1104_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13950;old_locus_tag=IXO1104_13910 NZ_CP047492.1 Protein Homology CDS 3039932 3042277 . - 0 ID=cds-WP_164994138.1;Parent=gene-IXO1104_RS13950;Dbxref=Genbank:WP_164994138.1;Name=WP_164994138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408802.1;locus_tag=IXO1104_RS13950;product=hypothetical protein;protein_id=WP_164994138.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3042431 3043750 . - . ID=gene-IXO1104_RS13955;Name=IXO1104_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13955;old_locus_tag=IXO1104_13915 NZ_CP047492.1 Protein Homology CDS 3042431 3043750 . - 0 ID=cds-WP_263117717.1;Parent=gene-IXO1104_RS13955;Dbxref=Genbank:WP_263117717.1;Name=WP_263117717.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS13955;product=IS701 family transposase;protein_id=WP_263117717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3043950 3044918 . - . ID=gene-IXO1104_RS13960;Name=IXO1104_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13960;old_locus_tag=IXO1104_13920 NZ_CP047492.1 Protein Homology CDS 3043950 3044918 . - 0 ID=cds-WP_011258529.1-6;Parent=gene-IXO1104_RS13960;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS13960;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3044970 3045164 . - . ID=gene-IXO1104_RS13965;Name=IXO1104_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13965;old_locus_tag=IXO1104_13925 NZ_CP047492.1 Protein Homology CDS 3044970 3045164 . - 0 ID=cds-WP_082357003.1;Parent=gene-IXO1104_RS13965;Dbxref=Genbank:WP_082357003.1;Name=WP_082357003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503410.1;locus_tag=IXO1104_RS13965;product=hypothetical protein;protein_id=WP_082357003.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3045249 3046211 . - . ID=gene-IXO1104_RS13970;Name=IXO1104_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13970;old_locus_tag=IXO1104_13930 NZ_CP047492.1 Protein Homology CDS 3045249 3046211 . - 0 ID=cds-WP_041182297.1;Parent=gene-IXO1104_RS13970;Dbxref=Genbank:WP_041182297.1;Name=WP_041182297.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS13970;product=IS1595 family transposase;protein_id=WP_041182297.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3046759 3047496 . - . ID=gene-IXO1104_RS13975;Name=IXO1104_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13975;old_locus_tag=IXO1104_13935 NZ_CP047492.1 Protein Homology CDS 3046759 3047496 . - 0 ID=cds-WP_041182624.1;Parent=gene-IXO1104_RS13975;Dbxref=Genbank:WP_041182624.1;Name=WP_041182624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408807.1;locus_tag=IXO1104_RS13975;product=hypothetical protein;protein_id=WP_041182624.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3047519 3049861 . - . ID=gene-IXO1104_RS13980;Name=IXO1104_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13980;old_locus_tag=IXO1104_13940 NZ_CP047492.1 Protein Homology CDS 3047519 3049861 . - 0 ID=cds-WP_164994139.1;Parent=gene-IXO1104_RS13980;Dbxref=Genbank:WP_164994139.1;Name=WP_164994139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408803.1;locus_tag=IXO1104_RS13980;product=hypothetical protein;protein_id=WP_164994139.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3049879 3050610 . - . ID=gene-IXO1104_RS13985;Name=IXO1104_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13985;old_locus_tag=IXO1104_13945 NZ_CP047492.1 Protein Homology CDS 3049879 3050610 . - 0 ID=cds-WP_027704080.1;Parent=gene-IXO1104_RS13985;Dbxref=Genbank:WP_027704080.1;Name=WP_027704080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503414.1;locus_tag=IXO1104_RS13985;product=hypothetical protein;protein_id=WP_027704080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3050638 3053472 . - . ID=gene-IXO1104_RS13990;Name=IXO1104_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13990;old_locus_tag=IXO1104_13950 NZ_CP047492.1 Protein Homology CDS 3050638 3053472 . - 0 ID=cds-WP_012444487.1;Parent=gene-IXO1104_RS13990;Dbxref=Genbank:WP_012444487.1;Name=WP_012444487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408808.1;locus_tag=IXO1104_RS13990;product=hypothetical protein;protein_id=WP_012444487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3053469 3054398 . - . ID=gene-IXO1104_RS13995;Name=IXO1104_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS13995;old_locus_tag=IXO1104_13955 NZ_CP047492.1 Protein Homology CDS 3053469 3054398 . - 0 ID=cds-WP_012444488.1;Parent=gene-IXO1104_RS13995;Dbxref=Genbank:WP_012444488.1;Name=WP_012444488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1104_RS13995;product=DUF4123 domain-containing protein;protein_id=WP_012444488.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3054407 3057169 . - . ID=gene-IXO1104_RS14000;Name=IXO1104_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14000;old_locus_tag=IXO1104_13960 NZ_CP047492.1 Protein Homology CDS 3054407 3057169 . - 0 ID=cds-WP_263117718.1;Parent=gene-IXO1104_RS14000;Dbxref=Genbank:WP_263117718.1;Name=WP_263117718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444636.1;locus_tag=IXO1104_RS14000;product=type VI secretion system tip protein VgrG;protein_id=WP_263117718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3057423 3058516 . + . ID=gene-IXO1104_RS14005;Name=IXO1104_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14005;old_locus_tag=IXO1104_13965 NZ_CP047492.1 Protein Homology CDS 3057423 3057609 . + 0 ID=cds-WP_256723596.1-2;Parent=gene-IXO1104_RS14005;Dbxref=Genbank:WP_256723596.1;Name=WP_256723596.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS14005;product=IS3 family transposase;protein_id=WP_256723596.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3057609 3058516 . + 2 ID=cds-WP_256723596.1-2;Parent=gene-IXO1104_RS14005;Dbxref=Genbank:WP_256723596.1;Name=WP_256723596.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS14005;product=IS3 family transposase;protein_id=WP_256723596.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3058539 3058658 . + . ID=gene-IXO1104_RS14010;Name=IXO1104_RS14010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14010;partial=true;pseudo=true;start_range=.,3058539 NZ_CP047492.1 Protein Homology CDS 3058539 3058658 . + 0 ID=cds-IXO1104_RS14010;Parent=gene-IXO1104_RS14010;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=IXO1104_RS14010;partial=true;product=transposase;pseudo=true;start_range=.,3058539;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3058750 3061326 . - . ID=gene-IXO1104_RS14015;Name=IXO1104_RS14015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14015;old_locus_tag=IXO1104_13970;partial=true;pseudo=true;start_range=.,3058750 NZ_CP047492.1 Protein Homology CDS 3058750 3061326 . - 0 ID=cds-IXO1104_RS14015;Parent=gene-IXO1104_RS14015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS14015;partial=true;product=TAL effector repeat-containing protein;pseudo=true;start_range=.,3058750;transl_table=11 NZ_CP047492.1 RefSeq gene 3061366 3061647 . - . ID=gene-IXO1104_RS14020;Name=IXO1104_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14020;old_locus_tag=IXO1104_13975 NZ_CP047492.1 Protein Homology CDS 3061366 3061647 . - 0 ID=cds-WP_256724398.1-2;Parent=gene-IXO1104_RS14020;Dbxref=Genbank:WP_256724398.1;Name=WP_256724398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444628.1;locus_tag=IXO1104_RS14020;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_256724398.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3061916 3062746 . + . ID=gene-IXO1104_RS14025;Name=IXO1104_RS14025;end_range=3062746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14025;old_locus_tag=IXO1104_13980;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3061916 3062746 . + 0 ID=cds-IXO1104_RS14025;Parent=gene-IXO1104_RS14025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3062746,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012701750.1;locus_tag=IXO1104_RS14025;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3062802 3063116 . + . ID=gene-IXO1104_RS14030;Name=IXO1104_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14030;old_locus_tag=IXO1104_13985 NZ_CP047492.1 Protein Homology CDS 3062802 3063116 . + 0 ID=cds-WP_011408814.1-2;Parent=gene-IXO1104_RS14030;Dbxref=Genbank:WP_011408814.1;Name=WP_011408814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403016.1;locus_tag=IXO1104_RS14030;product=DUF1153 domain-containing protein;protein_id=WP_011408814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3063344 3064663 . + . ID=gene-IXO1104_RS14035;Name=IXO1104_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14035;old_locus_tag=IXO1104_13990 NZ_CP047492.1 Protein Homology CDS 3063344 3064663 . + 0 ID=cds-WP_011408815.1;Parent=gene-IXO1104_RS14035;Dbxref=Genbank:WP_011408815.1;Name=WP_011408815.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS14035;product=IS701 family transposase;protein_id=WP_011408815.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3065143 3065526 . + . ID=gene-IXO1104_RS14040;Name=IXO1104_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14040;old_locus_tag=IXO1104_13995 NZ_CP047492.1 GeneMarkS-2+ CDS 3065143 3065526 . + 0 ID=cds-WP_143684382.1;Parent=gene-IXO1104_RS14040;Dbxref=Genbank:WP_143684382.1;Name=WP_143684382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS14040;product=hypothetical protein;protein_id=WP_143684382.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3065803 3065985 . - . ID=gene-IXO1104_RS14045;Name=IXO1104_RS14045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14045;old_locus_tag=IXO1104_14000;partial=true;pseudo=true;start_range=.,3065803 NZ_CP047492.1 Protein Homology CDS 3065803 3065985 . - 0 ID=cds-IXO1104_RS14045;Parent=gene-IXO1104_RS14045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403018.1;locus_tag=IXO1104_RS14045;partial=true;product=transposase;pseudo=true;start_range=.,3065803;transl_table=11 NZ_CP047492.1 RefSeq gene 3066115 3066375 . + . ID=gene-IXO1104_RS14050;Name=IXO1104_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14050;old_locus_tag=IXO1104_14005 NZ_CP047492.1 GeneMarkS-2+ CDS 3066115 3066375 . + 0 ID=cds-WP_200898175.1;Parent=gene-IXO1104_RS14050;Dbxref=Genbank:WP_200898175.1;Name=WP_200898175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS14050;product=hypothetical protein;protein_id=WP_200898175.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3066633 3067601 . - . ID=gene-IXO1104_RS14055;Name=IXO1104_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14055;old_locus_tag=IXO1104_14010 NZ_CP047492.1 Protein Homology CDS 3066633 3067601 . - 0 ID=cds-WP_164994141.1;Parent=gene-IXO1104_RS14055;Dbxref=Genbank:WP_164994141.1;Name=WP_164994141.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS14055;product=IS5 family transposase;protein_id=WP_164994141.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3067857 3068819 . + . ID=gene-IXO1104_RS14060;Name=IXO1104_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14060;old_locus_tag=IXO1104_14015 NZ_CP047492.1 Protein Homology CDS 3067857 3068819 . + 0 ID=cds-WP_011409456.1;Parent=gene-IXO1104_RS14060;Dbxref=Genbank:WP_011409456.1;Name=WP_011409456.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS14060;product=IS1595 family transposase;protein_id=WP_011409456.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3068873 3069763 . + . ID=gene-IXO1104_RS14065;Name=IXO1104_RS14065;end_range=3069763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14065;old_locus_tag=IXO1104_14020;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3068873 3069763 . + 0 ID=cds-IXO1104_RS14065;Parent=gene-IXO1104_RS14065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3069763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408960.1;locus_tag=IXO1104_RS14065;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3069765 3070181 . - . ID=gene-IXO1104_RS14070;Name=IXO1104_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14070;old_locus_tag=IXO1104_14025 NZ_CP047492.1 Protein Homology CDS 3069765 3070181 . - 0 ID=cds-WP_075239854.1;Parent=gene-IXO1104_RS14070;Dbxref=Genbank:WP_075239854.1;Name=WP_075239854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507646.1;locus_tag=IXO1104_RS14070;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_075239854.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3070178 3070522 . - . ID=gene-IXO1104_RS14075;Name=IXO1104_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14075;old_locus_tag=IXO1104_14030 NZ_CP047492.1 Protein Homology CDS 3070178 3070522 . - 0 ID=cds-WP_241846803.1;Parent=gene-IXO1104_RS14075;Dbxref=Genbank:WP_241846803.1;Name=WP_241846803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503266.1;locus_tag=IXO1104_RS14075;product=hypothetical protein;protein_id=WP_241846803.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3071045 3071323 . + . ID=gene-IXO1104_RS14080;Name=IXO1104_RS14080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14080;old_locus_tag=IXO1104_14040;partial=true;pseudo=true;start_range=.,3071045 NZ_CP047492.1 Protein Homology CDS 3071045 3071323 . + 0 ID=cds-IXO1104_RS14080;Parent=gene-IXO1104_RS14080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355064.1;locus_tag=IXO1104_RS14080;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,3071045;transl_table=11 NZ_CP047492.1 RefSeq gene 3071396 3071770 . - . ID=gene-IXO1104_RS14085;Name=IXO1104_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14085;old_locus_tag=IXO1104_14045 NZ_CP047492.1 Protein Homology CDS 3071396 3071770 . - 0 ID=cds-WP_075240677.1;Parent=gene-IXO1104_RS14085;Dbxref=Genbank:WP_075240677.1;Name=WP_075240677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016178.2;locus_tag=IXO1104_RS14085;product=ASCH domain-containing protein;protein_id=WP_075240677.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3071742 3072809 . - . ID=gene-IXO1104_RS14090;Name=IXO1104_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14090;old_locus_tag=IXO1104_14050 NZ_CP047492.1 Protein Homology CDS 3071742 3072809 . - 0 ID=cds-WP_075240678.1;Parent=gene-IXO1104_RS14090;Dbxref=Genbank:WP_075240678.1;Name=WP_075240678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005420600.1;locus_tag=IXO1104_RS14090;product=GNAT family N-acetyltransferase;protein_id=WP_075240678.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3073199 3076309 . - . ID=gene-IXO1104_RS14095;Name=IXO1104_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14095;old_locus_tag=IXO1104_14055 NZ_CP047492.1 Protein Homology CDS 3073199 3076309 . - 0 ID=cds-WP_241846804.1;Parent=gene-IXO1104_RS14095;Dbxref=Genbank:WP_241846804.1;Name=WP_241846804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576378.1;locus_tag=IXO1104_RS14095;product=TonB-dependent receptor;protein_id=WP_241846804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3077290 3077742 . + . ID=gene-IXO1104_RS14100;Name=IXO1104_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14100;old_locus_tag=IXO1104_14060 NZ_CP047492.1 Protein Homology CDS 3077290 3077742 . + 0 ID=cds-WP_041182176.1;Parent=gene-IXO1104_RS14100;Dbxref=Genbank:WP_041182176.1;Name=WP_041182176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302875.1;locus_tag=IXO1104_RS14100;product=hypothetical protein;protein_id=WP_041182176.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3077997 3079802 . + . ID=gene-IXO1104_RS14105;Name=IXO1104_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14105;old_locus_tag=IXO1104_14065 NZ_CP047492.1 Protein Homology CDS 3077997 3079802 . + 0 ID=cds-WP_041182177.1;Parent=gene-IXO1104_RS14105;Dbxref=Genbank:WP_041182177.1;Name=WP_041182177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408823.1;locus_tag=IXO1104_RS14105;product=TonB-dependent receptor;protein_id=WP_041182177.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3079804 3080151 . + . ID=gene-IXO1104_RS14110;Name=IXO1104_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14110;old_locus_tag=IXO1104_14070 NZ_CP047492.1 GeneMarkS-2+ CDS 3079804 3080151 . + 0 ID=cds-WP_128415369.1;Parent=gene-IXO1104_RS14110;Dbxref=Genbank:WP_128415369.1;Name=WP_128415369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS14110;product=hypothetical protein;protein_id=WP_128415369.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3080227 3080934 . + . ID=gene-IXO1104_RS14115;Name=IXO1104_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14115;old_locus_tag=IXO1104_14075 NZ_CP047492.1 Protein Homology CDS 3080227 3080934 . + 0 ID=cds-WP_012444621.1;Parent=gene-IXO1104_RS14115;Dbxref=Genbank:WP_012444621.1;Name=WP_012444621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444621.1;locus_tag=IXO1104_RS14115;product=superoxide dismutase;protein_id=WP_012444621.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3081086 3081478 . + . ID=gene-IXO1104_RS14120;Name=IXO1104_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14120;old_locus_tag=IXO1104_14080 NZ_CP047492.1 Protein Homology CDS 3081086 3081478 . + 0 ID=cds-WP_011259416.1;Parent=gene-IXO1104_RS14120;Dbxref=Genbank:WP_011259416.1;Name=WP_011259416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408825.1;locus_tag=IXO1104_RS14120;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_011259416.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3081525 3082016 . + . ID=gene-IXO1104_RS14125;Name=IXO1104_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14125;old_locus_tag=IXO1104_14085 NZ_CP047492.1 Protein Homology CDS 3081525 3082016 . + 0 ID=cds-WP_012444620.1;Parent=gene-IXO1104_RS14125;Dbxref=Genbank:WP_012444620.1;Name=WP_012444620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408826.1;locus_tag=IXO1104_RS14125;product=TonB-dependent receptor;protein_id=WP_012444620.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3082013 3082366 . + . ID=gene-IXO1104_RS14130;Name=IXO1104_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14130;old_locus_tag=IXO1104_14090 NZ_CP047492.1 GeneMarkS-2+ CDS 3082013 3082366 . + 0 ID=cds-WP_027703781.1;Parent=gene-IXO1104_RS14130;Dbxref=Genbank:WP_027703781.1;Name=WP_027703781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS14130;product=hypothetical protein;protein_id=WP_027703781.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3082455 3083195 . + . ID=gene-IXO1104_RS14135;Name=IXO1104_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14135;old_locus_tag=IXO1104_14095 NZ_CP047492.1 Protein Homology CDS 3082455 3083195 . + 0 ID=cds-WP_027703782.1;Parent=gene-IXO1104_RS14135;Dbxref=Genbank:WP_027703782.1;Name=WP_027703782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806574.1;locus_tag=IXO1104_RS14135;product=flagellar motor protein;protein_id=WP_027703782.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3083202 3084176 . + . ID=gene-IXO1104_RS14140;Name=motD;gbkey=Gene;gene=motD;gene_biotype=pseudogene;locus_tag=IXO1104_RS14140;old_locus_tag=IXO1104_14100;pseudo=true NZ_CP047492.1 Protein Homology CDS 3083202 3084176 . + 0 ID=cds-IXO1104_RS14140;Parent=gene-IXO1104_RS14140;Note=internal stop;gbkey=CDS;gene=motD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931860.1;locus_tag=IXO1104_RS14140;product=flagellar motor protein MotD;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3084178 3084960 . + . ID=gene-IXO1104_RS14145;Name=IXO1104_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14145;old_locus_tag=IXO1104_14105 NZ_CP047492.1 Protein Homology CDS 3084178 3084960 . + 0 ID=cds-WP_011259419.1;Parent=gene-IXO1104_RS14145;Dbxref=Genbank:WP_011259419.1;Name=WP_011259419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503257.1;locus_tag=IXO1104_RS14145;product=ParA family protein;protein_id=WP_011259419.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3084957 3085979 . + . ID=gene-IXO1104_RS14150;Name=IXO1104_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14150;old_locus_tag=IXO1104_14110 NZ_CP047492.1 Protein Homology CDS 3084957 3085979 . + 0 ID=cds-WP_011259420.1;Parent=gene-IXO1104_RS14150;Dbxref=Genbank:WP_011259420.1;Name=WP_011259420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118095.1;locus_tag=IXO1104_RS14150;product=chemotaxis protein CheW;protein_id=WP_011259420.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3086080 3086388 . + . ID=gene-IXO1104_RS14155;Name=IXO1104_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14155;old_locus_tag=IXO1104_14115 NZ_CP047492.1 Protein Homology CDS 3086080 3086388 . + 0 ID=cds-WP_011259421.1;Parent=gene-IXO1104_RS14155;Dbxref=Genbank:WP_011259421.1;Name=WP_011259421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302363.1;locus_tag=IXO1104_RS14155;product=STAS domain-containing protein;protein_id=WP_011259421.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3086385 3086750 . + . ID=gene-IXO1104_RS14160;Name=IXO1104_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14160;old_locus_tag=IXO1104_14120 NZ_CP047492.1 Protein Homology CDS 3086385 3086750 . + 0 ID=cds-WP_002806565.1;Parent=gene-IXO1104_RS14160;Dbxref=Genbank:WP_002806565.1;Name=WP_002806565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806565.1;locus_tag=IXO1104_RS14160;product=response regulator;protein_id=WP_002806565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3086784 3088793 . + . ID=gene-IXO1104_RS14165;Name=IXO1104_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14165;old_locus_tag=IXO1104_14125 NZ_CP047492.1 Protein Homology CDS 3086784 3088793 . + 0 ID=cds-WP_011259422.1;Parent=gene-IXO1104_RS14165;Dbxref=Genbank:WP_011259422.1;Name=WP_011259422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577777.1;locus_tag=IXO1104_RS14165;product=chemotaxis protein CheA;protein_id=WP_011259422.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3088946 3089164 . + . ID=gene-IXO1104_RS14170;Name=IXO1104_RS14170;end_range=3089164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14170;old_locus_tag=IXO1104_14130;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3088946 3089164 . + 0 ID=cds-IXO1104_RS14170;Parent=gene-IXO1104_RS14170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3089164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612229.1;locus_tag=IXO1104_RS14170;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3089429 3090385 . + . ID=gene-IXO1104_RS14175;Name=IXO1104_RS14175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14175;old_locus_tag=IXO1104_14135;pseudo=true NZ_CP047492.1 Protein Homology CDS 3089429 3090385 . + 0 ID=cds-IXO1104_RS14175;Parent=gene-IXO1104_RS14175;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS14175;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3090392 3090814 . + . ID=gene-IXO1104_RS14180;Name=IXO1104_RS14180;end_range=3090814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14180;old_locus_tag=IXO1104_14140;partial=true;pseudo=true;start_range=.,3090392 NZ_CP047492.1 Protein Homology CDS 3090392 3090814 . + 0 ID=cds-IXO1104_RS14180;Parent=gene-IXO1104_RS14180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3090814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347241.1;locus_tag=IXO1104_RS14180;partial=true;product=chemotaxis protein;pseudo=true;start_range=.,3090392;transl_table=11 NZ_CP047492.1 RefSeq gene 3090841 3091875 . - . ID=gene-IXO1104_RS14185;Name=IXO1104_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14185;old_locus_tag=IXO1104_14145 NZ_CP047492.1 Protein Homology CDS 3090841 3091875 . - 0 ID=cds-WP_011407587.1-2;Parent=gene-IXO1104_RS14185;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1104_RS14185;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3091931 3092699 . + . ID=gene-IXO1104_RS14190;Name=IXO1104_RS14190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14190;old_locus_tag=IXO1104_14150;partial=true;pseudo=true;start_range=.,3091931 NZ_CP047492.1 Protein Homology CDS 3091931 3092699 . + 0 ID=cds-IXO1104_RS14190;Parent=gene-IXO1104_RS14190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090085.1;locus_tag=IXO1104_RS14190;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,3091931;transl_table=11 NZ_CP047492.1 RefSeq gene 3093015 3093776 . + . ID=gene-IXO1104_RS14195;Name=IXO1104_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14195;old_locus_tag=IXO1104_14155 NZ_CP047492.1 Protein Homology CDS 3093015 3093776 . + 0 ID=cds-WP_011408833.1;Parent=gene-IXO1104_RS14195;Dbxref=Genbank:WP_011408833.1;Name=WP_011408833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914931.1;locus_tag=IXO1104_RS14195;product=transporter;protein_id=WP_011408833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3093790 3096132 . + . ID=gene-IXO1104_RS14200;Name=IXO1104_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14200;old_locus_tag=IXO1104_14160 NZ_CP047492.1 Protein Homology CDS 3093790 3096132 . + 0 ID=cds-WP_075243896.1;Parent=gene-IXO1104_RS14200;Dbxref=Genbank:WP_075243896.1;Name=WP_075243896.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408834.1;locus_tag=IXO1104_RS14200;product=methyl-accepting chemotaxis protein;protein_id=WP_075243896.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3096629 3097594 . + . ID=gene-IXO1104_RS14205;Name=IXO1104_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14205;old_locus_tag=IXO1104_14165 NZ_CP047492.1 Protein Homology CDS 3096629 3097594 . + 0 ID=cds-WP_109181932.1;Parent=gene-IXO1104_RS14205;Dbxref=Genbank:WP_109181932.1;Name=WP_109181932.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS14205;product=IS1595 family transposase;protein_id=WP_109181932.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3097834 3100080 . + . ID=gene-IXO1104_RS14210;Name=IXO1104_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14210;old_locus_tag=IXO1104_14170 NZ_CP047492.1 Protein Homology CDS 3097834 3100080 . + 0 ID=cds-WP_044756755.1;Parent=gene-IXO1104_RS14210;Dbxref=Genbank:WP_044756755.1;Name=WP_044756755.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113509.1;locus_tag=IXO1104_RS14210;product=methyl-accepting chemotaxis protein;protein_id=WP_044756755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3100296 3100372 . + . ID=gene-IXO1104_RS14215;Name=IXO1104_RS14215;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14215;old_locus_tag=IXO1104_14175 NZ_CP047492.1 cmsearch ncRNA 3100296 3100372 . + . ID=rna-IXO1104_RS14215;Parent=gene-IXO1104_RS14215;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14215;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3100296 3100372 . + . ID=exon-IXO1104_RS14215-1;Parent=rna-IXO1104_RS14215;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14215;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3100808 3102919 . + . ID=gene-IXO1104_RS14220;Name=IXO1104_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14220;old_locus_tag=IXO1104_14180 NZ_CP047492.1 Protein Homology CDS 3100808 3102919 . + 0 ID=cds-WP_075240404.1;Parent=gene-IXO1104_RS14220;Dbxref=Genbank:WP_075240404.1;Name=WP_075240404.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155257.1;locus_tag=IXO1104_RS14220;product=methyl-accepting chemotaxis protein;protein_id=WP_075240404.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3103604 3105679 . + . ID=gene-IXO1104_RS14225;Name=IXO1104_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14225;old_locus_tag=IXO1104_14185 NZ_CP047492.1 Protein Homology CDS 3103604 3105679 . + 0 ID=cds-WP_143701671.1;Parent=gene-IXO1104_RS14225;Dbxref=Genbank:WP_143701671.1;Name=WP_143701671.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444606.1;locus_tag=IXO1104_RS14225;product=methyl-accepting chemotaxis protein;protein_id=WP_143701671.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3106274 3108535 . + . ID=gene-IXO1104_RS14230;Name=IXO1104_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14230;old_locus_tag=IXO1104_14190 NZ_CP047492.1 Protein Homology CDS 3106274 3108535 . + 0 ID=cds-WP_011259431.1;Parent=gene-IXO1104_RS14230;Dbxref=Genbank:WP_011259431.1;Name=WP_011259431.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155261.1;locus_tag=IXO1104_RS14230;product=methyl-accepting chemotaxis protein;protein_id=WP_011259431.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3108929 3111190 . + . ID=gene-IXO1104_RS14235;Name=IXO1104_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14235;old_locus_tag=IXO1104_14195 NZ_CP047492.1 Protein Homology CDS 3108929 3111190 . + 0 ID=cds-WP_011259432.1;Parent=gene-IXO1104_RS14235;Dbxref=Genbank:WP_011259432.1;Name=WP_011259432.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155262.1;locus_tag=IXO1104_RS14235;product=methyl-accepting chemotaxis protein;protein_id=WP_011259432.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3111801 3111877 . + . ID=gene-IXO1104_RS14240;Name=IXO1104_RS14240;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14240;old_locus_tag=IXO1104_14200 NZ_CP047492.1 cmsearch ncRNA 3111801 3111877 . + . ID=rna-IXO1104_RS14240;Parent=gene-IXO1104_RS14240;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14240;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3111801 3111877 . + . ID=exon-IXO1104_RS14240-1;Parent=rna-IXO1104_RS14240;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14240;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3112160 3112945 . + . ID=gene-IXO1104_RS14245;Name=IXO1104_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14245;old_locus_tag=IXO1104_14205 NZ_CP047492.1 Protein Homology CDS 3112160 3112945 . + 0 ID=cds-WP_075240118.1;Parent=gene-IXO1104_RS14245;Dbxref=Genbank:WP_075240118.1;Name=WP_075240118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159446.1;locus_tag=IXO1104_RS14245;product=flagellar brake protein;protein_id=WP_075240118.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3113081 3113563 . + . ID=gene-IXO1104_RS14250;Name=IXO1104_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14250;old_locus_tag=IXO1104_14210 NZ_CP047492.1 Protein Homology CDS 3113081 3113563 . + 0 ID=cds-WP_011408841.1;Parent=gene-IXO1104_RS14250;Dbxref=Genbank:WP_011408841.1;Name=WP_011408841.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486339.1;locus_tag=IXO1104_RS14250;product=chemotaxis protein CheW;protein_id=WP_011408841.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3113793 3114368 . - . ID=gene-IXO1104_RS14255;Name=IXO1104_RS14255;end_range=3114368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14255;old_locus_tag=IXO1104_14215;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3113793 3114368 . - 0 ID=cds-IXO1104_RS14255;Parent=gene-IXO1104_RS14255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3114368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS14255;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3114412 3115210 . + . ID=gene-IXO1104_RS14260;Name=IXO1104_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14260;old_locus_tag=IXO1104_14220 NZ_CP047492.1 Protein Homology CDS 3114412 3114683 . + 0 ID=cds-WP_094187763.1-6;Parent=gene-IXO1104_RS14260;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14260;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3114682 3115210 . + 1 ID=cds-WP_094187763.1-6;Parent=gene-IXO1104_RS14260;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14260;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3115391 3115776 . + . ID=gene-IXO1104_RS14265;Name=IXO1104_RS14265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14265;old_locus_tag=IXO1104_14225;pseudo=true NZ_CP047492.1 Protein Homology CDS 3115391 3115776 . + 0 ID=cds-IXO1104_RS14265;Parent=gene-IXO1104_RS14265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486337.1;locus_tag=IXO1104_RS14265;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3116033 3117067 . + . ID=gene-IXO1104_RS14270;Name=IXO1104_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14270;old_locus_tag=IXO1104_14230 NZ_CP047492.1 Protein Homology CDS 3116033 3117067 . + 0 ID=cds-WP_011407587.1-3;Parent=gene-IXO1104_RS14270;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1104_RS14270;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3117088 3119361 . + . ID=gene-IXO1104_RS14275;Name=IXO1104_RS14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14275;old_locus_tag=IXO1104_14235;partial=true;pseudo=true;start_range=.,3117088 NZ_CP047492.1 Protein Homology CDS 3117088 3119361 . + 0 ID=cds-IXO1104_RS14275;Parent=gene-IXO1104_RS14275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486335.1;locus_tag=IXO1104_RS14275;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,3117088;transl_table=11 NZ_CP047492.1 RefSeq gene 3119607 3120473 . + . ID=gene-IXO1104_RS14280;Name=IXO1104_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14280;old_locus_tag=IXO1104_14240 NZ_CP047492.1 Protein Homology CDS 3119607 3120473 . + 0 ID=cds-WP_011408845.1;Parent=gene-IXO1104_RS14280;Dbxref=Genbank:WP_011408845.1;Name=WP_011408845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302811.1;locus_tag=IXO1104_RS14280;product=chemotaxis protein CheR;protein_id=WP_011408845.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3120470 3121066 . + . ID=gene-IXO1104_RS14285;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=IXO1104_RS14285;old_locus_tag=IXO1104_14245 NZ_CP047492.1 Protein Homology CDS 3120470 3121066 . + 0 ID=cds-WP_011259439.1;Parent=gene-IXO1104_RS14285;Dbxref=Genbank:WP_011259439.1;Name=WP_011259439.1;Ontology_term=GO:0006935,GO:0050568;gbkey=CDS;gene=cheD;go_function=protein-glutamine glutaminase activity|0050568||IEA;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486330.1;locus_tag=IXO1104_RS14285;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_011259439.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3121063 3122139 . + . ID=gene-IXO1104_RS14290;Name=IXO1104_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14290;old_locus_tag=IXO1104_14250 NZ_CP047492.1 Protein Homology CDS 3121063 3122139 . + 0 ID=cds-WP_011259440.1;Parent=gene-IXO1104_RS14290;Dbxref=Genbank:WP_011259440.1;Name=WP_011259440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914919.1;locus_tag=IXO1104_RS14290;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_011259440.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3122146 3124491 . + . ID=gene-IXO1104_RS14295;Name=IXO1104_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14295;old_locus_tag=IXO1104_14255 NZ_CP047492.1 Protein Homology CDS 3122146 3124491 . + 0 ID=cds-WP_228329600.1;Parent=gene-IXO1104_RS14295;Dbxref=Genbank:WP_228329600.1;Name=WP_228329600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303209.1;locus_tag=IXO1104_RS14295;product=EAL domain-containing protein;protein_id=WP_228329600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3124583 3124659 . - . ID=gene-IXO1104_RS14300;Name=IXO1104_RS14300;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14300;old_locus_tag=IXO1104_14260 NZ_CP047492.1 cmsearch ncRNA 3124583 3124659 . - . ID=rna-IXO1104_RS14300;Parent=gene-IXO1104_RS14300;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14300;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3124583 3124659 . - . ID=exon-IXO1104_RS14300-1;Parent=rna-IXO1104_RS14300;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14300;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3125147 3125962 . - . ID=gene-IXO1104_RS14305;Name=IXO1104_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14305;old_locus_tag=IXO1104_14265 NZ_CP047492.1 Protein Homology CDS 3125147 3125962 . - 0 ID=cds-WP_011259442.1;Parent=gene-IXO1104_RS14305;Dbxref=Genbank:WP_011259442.1;Name=WP_011259442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259442.1;locus_tag=IXO1104_RS14305;product=alpha/beta fold hydrolase;protein_id=WP_011259442.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3126316 3128907 . - . ID=gene-IXO1104_RS14310;Name=IXO1104_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14310;old_locus_tag=IXO1104_14270 NZ_CP047492.1 Protein Homology CDS 3126316 3128907 . - 0 ID=cds-WP_075239232.1;Parent=gene-IXO1104_RS14310;Dbxref=Genbank:WP_075239232.1;Name=WP_075239232.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=IXO1104_RS14310;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_075239232.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3128973 3129383 . - . ID=gene-IXO1104_RS14315;Name=IXO1104_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14315;old_locus_tag=IXO1104_14275 NZ_CP047492.1 Protein Homology CDS 3128973 3129383 . - 0 ID=cds-WP_011259444.1;Parent=gene-IXO1104_RS14315;Dbxref=Genbank:WP_011259444.1;Name=WP_011259444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259444.1;locus_tag=IXO1104_RS14315;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_011259444.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3129380 3129628 . - . ID=gene-IXO1104_RS14320;Name=IXO1104_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14320;old_locus_tag=IXO1104_14280 NZ_CP047492.1 Protein Homology CDS 3129380 3129628 . - 0 ID=cds-WP_003486316.1;Parent=gene-IXO1104_RS14320;Dbxref=Genbank:WP_003486316.1;Name=WP_003486316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115874.1;locus_tag=IXO1104_RS14320;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003486316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3129776 3132544 . + . ID=gene-IXO1104_RS14325;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14325;old_locus_tag=IXO1104_14285 NZ_CP047492.1 Protein Homology CDS 3129776 3132544 . + 0 ID=cds-WP_011259446.1;Parent=gene-IXO1104_RS14325;Dbxref=Genbank:WP_011259446.1;Name=WP_011259446.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159833.1;locus_tag=IXO1104_RS14325;product=aconitate hydratase AcnA;protein_id=WP_011259446.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3132667 3133096 . - . ID=gene-IXO1104_RS14330;Name=IXO1104_RS14330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14330;old_locus_tag=IXO1104_14290;pseudo=true NZ_CP047492.1 Protein Homology CDS 3132667 3133096 . - 0 ID=cds-IXO1104_RS14330;Parent=gene-IXO1104_RS14330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155275.1;locus_tag=IXO1104_RS14330;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3133194 3134876 . + . ID=gene-IXO1104_RS14335;Name=IXO1104_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14335;old_locus_tag=IXO1104_14295 NZ_CP047492.1 Protein Homology CDS 3133194 3134876 . + 0 ID=cds-WP_011259449.1;Parent=gene-IXO1104_RS14335;Dbxref=Genbank:WP_011259449.1;Name=WP_011259449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571491.1;locus_tag=IXO1104_RS14335;product=long-chain fatty acid--CoA ligase;protein_id=WP_011259449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3135053 3135922 . + . ID=gene-IXO1104_RS14340;Name=IXO1104_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14340;old_locus_tag=IXO1104_14300 NZ_CP047492.1 Protein Homology CDS 3135053 3135922 . + 0 ID=cds-WP_011408848.1;Parent=gene-IXO1104_RS14340;Dbxref=Genbank:WP_011408848.1;Name=WP_011408848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486308.1;locus_tag=IXO1104_RS14340;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_011408848.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3135934 3138111 . - . ID=gene-IXO1104_RS14345;Name=IXO1104_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14345;old_locus_tag=IXO1104_14305 NZ_CP047492.1 Protein Homology CDS 3135934 3138111 . - 0 ID=cds-WP_011259451.1;Parent=gene-IXO1104_RS14345;Dbxref=Genbank:WP_011259451.1;Name=WP_011259451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174224.1;locus_tag=IXO1104_RS14345;product=ATP-binding protein;protein_id=WP_011259451.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3138476 3139612 . - . ID=gene-IXO1104_RS14350;Name=IXO1104_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14350;old_locus_tag=IXO1104_14310 NZ_CP047492.1 Protein Homology CDS 3138476 3139612 . - 0 ID=cds-WP_011408849.1;Parent=gene-IXO1104_RS14350;Dbxref=Genbank:WP_011408849.1;Name=WP_011408849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922786.1;locus_tag=IXO1104_RS14350;product=two-component system response regulator;protein_id=WP_011408849.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3139754 3141271 . - . ID=gene-IXO1104_RS14355;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=IXO1104_RS14355;old_locus_tag=IXO1104_14315 NZ_CP047492.1 Protein Homology CDS 3139754 3141271 . - 0 ID=cds-WP_044756749.1;Parent=gene-IXO1104_RS14355;Dbxref=Genbank:WP_044756749.1;Name=WP_044756749.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486300.1;locus_tag=IXO1104_RS14355;product=lysine--tRNA ligase;protein_id=WP_044756749.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3141475 3142600 . - . ID=gene-IXO1104_RS14360;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14360;old_locus_tag=IXO1104_14320 NZ_CP047492.1 Protein Homology CDS 3142526 3142600 . - 0 ID=cds-WP_014503214.1;Parent=gene-IXO1104_RS14360;Dbxref=Genbank:WP_014503214.1;Name=WP_014503214.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=IXO1104_RS14360;product=peptide chain release factor 2;protein_id=WP_014503214.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3141475 3142524 . - 0 ID=cds-WP_014503214.1;Parent=gene-IXO1104_RS14360;Dbxref=Genbank:WP_014503214.1;Name=WP_014503214.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=IXO1104_RS14360;product=peptide chain release factor 2;protein_id=WP_014503214.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3142854 3143801 . - . ID=gene-IXO1104_RS14365;Name=IXO1104_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14365;old_locus_tag=IXO1104_14325 NZ_CP047492.1 Protein Homology CDS 3142854 3143801 . - 0 ID=cds-WP_044756748.1;Parent=gene-IXO1104_RS14365;Dbxref=Genbank:WP_044756748.1;Name=WP_044756748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155283.1;locus_tag=IXO1104_RS14365;product=LytTR family transcriptional regulator;protein_id=WP_044756748.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3143961 3145212 . + . ID=gene-IXO1104_RS14370;Name=IXO1104_RS14370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14370;old_locus_tag=IXO1104_14330;pseudo=true NZ_CP047492.1 Protein Homology CDS 3143961 3145212 . + 0 ID=cds-IXO1104_RS14370;Parent=gene-IXO1104_RS14370;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259456.1;locus_tag=IXO1104_RS14370;product=acyltransferase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3145095 3146057 . + . ID=gene-IXO1104_RS14375;Name=IXO1104_RS14375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14375;old_locus_tag=IXO1104_14335;pseudo=true NZ_CP047492.1 Protein Homology CDS 3145095 3146057 . + 0 ID=cds-IXO1104_RS14375;Parent=gene-IXO1104_RS14375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378466.1;locus_tag=IXO1104_RS14375;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3147063 3147311 . + . ID=gene-IXO1104_RS14380;Name=IXO1104_RS14380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14380;partial=true;pseudo=true;start_range=.,3147063 NZ_CP047492.1 Protein Homology CDS 3147063 3147311 . + 0 ID=cds-IXO1104_RS14380;Parent=gene-IXO1104_RS14380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=IXO1104_RS14380;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3147063;transl_table=11 NZ_CP047492.1 RefSeq gene 3147472 3147849 . - . ID=gene-IXO1104_RS14385;Name=IXO1104_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14385;old_locus_tag=IXO1104_14350 NZ_CP047492.1 Protein Homology CDS 3147472 3147849 . - 0 ID=cds-WP_011408855.1;Parent=gene-IXO1104_RS14385;Dbxref=Genbank:WP_011408855.1;Name=WP_011408855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004666662.1;locus_tag=IXO1104_RS14385;product=hypothetical protein;protein_id=WP_011408855.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3148144 3149100 . - . ID=gene-IXO1104_RS14390;Name=IXO1104_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14390;old_locus_tag=IXO1104_14355 NZ_CP047492.1 Protein Homology CDS 3148144 3149100 . - 0 ID=cds-WP_011407237.1-9;Parent=gene-IXO1104_RS14390;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS14390;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3149440 3150405 . - . ID=gene-IXO1104_RS14395;Name=IXO1104_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14395;old_locus_tag=IXO1104_14360 NZ_CP047492.1 Protein Homology CDS 3149440 3150405 . - 0 ID=cds-WP_109181987.1;Parent=gene-IXO1104_RS14395;Dbxref=Genbank:WP_109181987.1;Name=WP_109181987.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS14395;product=IS1595 family transposase;protein_id=WP_109181987.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3150494 3150766 . - . ID=gene-IXO1104_RS14400;Name=IXO1104_RS14400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14400;old_locus_tag=IXO1104_14365;partial=true;pseudo=true;start_range=.,3150494 NZ_CP047492.1 Protein Homology CDS 3150494 3150766 . - 0 ID=cds-IXO1104_RS14400;Parent=gene-IXO1104_RS14400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167297.1;locus_tag=IXO1104_RS14400;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3150494;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3150912 3151124 . - . ID=gene-IXO1104_RS14405;Name=IXO1104_RS14405;end_range=3151124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14405;old_locus_tag=IXO1104_14370;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3150912 3151124 . - 0 ID=cds-IXO1104_RS14405;Parent=gene-IXO1104_RS14405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3151124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158821.1;locus_tag=IXO1104_RS14405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3151153 3152892 . - . ID=gene-IXO1104_RS14410;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS14410;old_locus_tag=IXO1104_14375 NZ_CP047492.1 Protein Homology CDS 3151153 3152892 . - 0 ID=cds-WP_011408857.1;Parent=gene-IXO1104_RS14410;Dbxref=Genbank:WP_011408857.1;Name=WP_011408857.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259460.1;locus_tag=IXO1104_RS14410;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_011408857.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3152889 3153809 . - . ID=gene-IXO1104_RS14415;Name=IXO1104_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14415;old_locus_tag=IXO1104_14380 NZ_CP047492.1 Protein Homology CDS 3152889 3153809 . - 0 ID=cds-WP_011259461.1;Parent=gene-IXO1104_RS14415;Dbxref=Genbank:WP_011259461.1;Name=WP_011259461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806444.1;locus_tag=IXO1104_RS14415;product=hypothetical protein;protein_id=WP_011259461.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3153826 3154290 . - . ID=gene-IXO1104_RS14420;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14420;old_locus_tag=IXO1104_14385 NZ_CP047492.1 Protein Homology CDS 3153826 3154290 . - 0 ID=cds-WP_010367104.1;Parent=gene-IXO1104_RS14420;Dbxref=Genbank:WP_010367104.1;Name=WP_010367104.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507602.1;locus_tag=IXO1104_RS14420;product=transcription elongation factor GreA;protein_id=WP_010367104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3154299 3157541 . - . ID=gene-IXO1104_RS14425;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14425;old_locus_tag=IXO1104_14390 NZ_CP047492.1 Protein Homology CDS 3154299 3157541 . - 0 ID=cds-WP_011259463.1;Parent=gene-IXO1104_RS14425;Dbxref=Genbank:WP_011259463.1;Name=WP_011259463.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806440.1;locus_tag=IXO1104_RS14425;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_011259463.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3157550 3157993 . - . ID=gene-IXO1104_RS14430;Name=IXO1104_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14430;old_locus_tag=IXO1104_14395 NZ_CP047492.1 Protein Homology CDS 3157550 3157993 . - 0 ID=cds-WP_012444585.1;Parent=gene-IXO1104_RS14430;Dbxref=Genbank:WP_012444585.1;Name=WP_012444585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486285.1;locus_tag=IXO1104_RS14430;product=hypothetical protein;protein_id=WP_012444585.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3157993 3159117 . - . ID=gene-IXO1104_RS14435;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14435;old_locus_tag=IXO1104_14400 NZ_CP047492.1 Protein Homology CDS 3157993 3159117 . - 0 ID=cds-WP_011259464.1;Parent=gene-IXO1104_RS14435;Dbxref=Genbank:WP_011259464.1;Name=WP_011259464.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851215.1;locus_tag=IXO1104_RS14435;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_011259464.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3159357 3160073 . - . ID=gene-IXO1104_RS14440;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14440;old_locus_tag=IXO1104_14405 NZ_CP047492.1 Protein Homology CDS 3159357 3160073 . - 0 ID=cds-WP_059317447.1;Parent=gene-IXO1104_RS14440;Dbxref=Genbank:WP_059317447.1;Name=WP_059317447.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367114.1;locus_tag=IXO1104_RS14440;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_059317447.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3160483 3161246 . - . ID=gene-IXO1104_RS14445;Name=IXO1104_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14445;old_locus_tag=IXO1104_14410 NZ_CP047492.1 Protein Homology CDS 3160931 3161246 . - 0 ID=cds-WP_094187715.1-11;Parent=gene-IXO1104_RS14445;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS14445;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3160483 3160931 . - 2 ID=cds-WP_094187715.1-11;Parent=gene-IXO1104_RS14445;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS14445;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3161299 3162018 . - . ID=gene-IXO1104_RS14450;Name=IXO1104_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14450;old_locus_tag=IXO1104_14415 NZ_CP047492.1 Protein Homology CDS 3161299 3162018 . - 0 ID=cds-WP_011259465.1;Parent=gene-IXO1104_RS14450;Dbxref=Genbank:WP_011259465.1;Name=WP_011259465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259465.1;locus_tag=IXO1104_RS14450;product=MOSC domain-containing protein;protein_id=WP_011259465.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3162015 3163217 . - . ID=gene-IXO1104_RS14455;Name=IXO1104_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14455;old_locus_tag=IXO1104_14420 NZ_CP047492.1 Protein Homology CDS 3162015 3163217 . - 0 ID=cds-WP_011259466.1;Parent=gene-IXO1104_RS14455;Dbxref=Genbank:WP_011259466.1;Name=WP_011259466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259466.1;locus_tag=IXO1104_RS14455;product=PLP-dependent aminotransferase family protein;protein_id=WP_011259466.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3163523 3164011 . - . ID=gene-IXO1104_RS14460;Name=IXO1104_RS14460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14460;partial=true;pseudo=true;start_range=.,3163523 NZ_CP047492.1 Protein Homology CDS 3163523 3164011 . - 0 ID=cds-IXO1104_RS14460;Parent=gene-IXO1104_RS14460;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159457.1;locus_tag=IXO1104_RS14460;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;start_range=.,3163523;transl_table=11 NZ_CP047492.1 RefSeq gene 3164071 3164325 . - . ID=gene-IXO1104_RS14465;Name=IXO1104_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14465;old_locus_tag=IXO1104_14435 NZ_CP047492.1 Protein Homology CDS 3164071 3164325 . - 0 ID=cds-WP_011259469.1;Parent=gene-IXO1104_RS14465;Dbxref=Genbank:WP_011259469.1;Name=WP_011259469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051184.1;locus_tag=IXO1104_RS14465;product=hypothetical protein;protein_id=WP_011259469.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3164327 3166186 . - . ID=gene-IXO1104_RS14470;Name=IXO1104_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14470;old_locus_tag=IXO1104_14440 NZ_CP047492.1 Protein Homology CDS 3164327 3166186 . - 0 ID=cds-WP_011408864.1;Parent=gene-IXO1104_RS14470;Dbxref=Genbank:WP_011408864.1;Name=WP_011408864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164088.1;locus_tag=IXO1104_RS14470;product=ferrous iron transporter B;protein_id=WP_011408864.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3166183 3166431 . - . ID=gene-IXO1104_RS14475;Name=IXO1104_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14475;old_locus_tag=IXO1104_14445 NZ_CP047492.1 Protein Homology CDS 3166183 3166431 . - 0 ID=cds-WP_011408865.1;Parent=gene-IXO1104_RS14475;Dbxref=Genbank:WP_011408865.1;Name=WP_011408865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486267.1;locus_tag=IXO1104_RS14475;product=ferrous iron transport protein A;protein_id=WP_011408865.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3166546 3167343 . + . ID=gene-IXO1104_RS14480;Name=IXO1104_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14480;old_locus_tag=IXO1104_14450 NZ_CP047492.1 Protein Homology CDS 3166546 3167343 . + 0 ID=cds-WP_011259472.1;Parent=gene-IXO1104_RS14480;Dbxref=Genbank:WP_011259472.1;Name=WP_011259472.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503195.1;locus_tag=IXO1104_RS14480;product=enoyl-CoA hydratase-related protein;protein_id=WP_011259472.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3167340 3167729 . + . ID=gene-IXO1104_RS14485;Name=IXO1104_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14485;old_locus_tag=IXO1104_14455 NZ_CP047492.1 Protein Homology CDS 3167340 3167729 . + 0 ID=cds-WP_075240010.1;Parent=gene-IXO1104_RS14485;Dbxref=Genbank:WP_075240010.1;Name=WP_075240010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367129.1;locus_tag=IXO1104_RS14485;product=VOC family protein;protein_id=WP_075240010.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3167800 3168696 . + . ID=gene-IXO1104_RS14490;Name=IXO1104_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14490;old_locus_tag=IXO1104_14460 NZ_CP047492.1 Protein Homology CDS 3167800 3168696 . + 0 ID=cds-WP_011408867.1;Parent=gene-IXO1104_RS14490;Dbxref=Genbank:WP_011408867.1;Name=WP_011408867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503194.1;locus_tag=IXO1104_RS14490;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_011408867.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3168835 3169605 . + . ID=gene-IXO1104_RS14495;Name=IXO1104_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14495;old_locus_tag=IXO1104_14465 NZ_CP047492.1 Protein Homology CDS 3168835 3169605 . + 0 ID=cds-WP_011259475.1;Parent=gene-IXO1104_RS14495;Dbxref=Genbank:WP_011259475.1;Name=WP_011259475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486257.1;locus_tag=IXO1104_RS14495;product=SDR family oxidoreductase;protein_id=WP_011259475.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3169727 3170293 . + . ID=gene-IXO1104_RS14500;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=IXO1104_RS14500;old_locus_tag=IXO1104_14470 NZ_CP047492.1 Protein Homology CDS 3169727 3170293 . + 0 ID=cds-WP_011259476.1;Parent=gene-IXO1104_RS14500;Dbxref=Genbank:WP_011259476.1;Name=WP_011259476.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=IXO1104_RS14500;product=elongation factor P-like protein YeiP;protein_id=WP_011259476.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3170293 3170679 . + . ID=gene-IXO1104_RS14505;Name=IXO1104_RS14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14505;old_locus_tag=IXO1104_14475;pseudo=true NZ_CP047492.1 Protein Homology CDS 3170293 3170679 . + 0 ID=cds-IXO1104_RS14505;Parent=gene-IXO1104_RS14505;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155301.1;locus_tag=IXO1104_RS14505;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3171186 3171551 . - . ID=gene-IXO1104_RS14510;Name=IXO1104_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14510;old_locus_tag=IXO1104_14480 NZ_CP047492.1 Protein Homology CDS 3171186 3171551 . - 0 ID=cds-WP_012444578.1;Parent=gene-IXO1104_RS14510;Dbxref=Genbank:WP_012444578.1;Name=WP_012444578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408868.1;locus_tag=IXO1104_RS14510;product=hypothetical protein;protein_id=WP_012444578.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3171632 3172504 . + . ID=gene-IXO1104_RS14515;Name=IXO1104_RS14515;end_range=3172504,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14515;old_locus_tag=IXO1104_14485;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3171632 3172504 . + 0 ID=cds-IXO1104_RS14515;Parent=gene-IXO1104_RS14515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3172504,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS14515;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3172542 3173969 . - . ID=gene-IXO1104_RS14520;Name=IXO1104_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14520;old_locus_tag=IXO1104_14490 NZ_CP047492.1 Protein Homology CDS 3172542 3173969 . - 0 ID=cds-WP_011408871.1;Parent=gene-IXO1104_RS14520;Dbxref=Genbank:WP_011408871.1;Name=WP_011408871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371361.1;locus_tag=IXO1104_RS14520;product=sugar porter family MFS transporter;protein_id=WP_011408871.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3174054 3175391 . - . ID=gene-IXO1104_RS14525;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14525;old_locus_tag=IXO1104_14495 NZ_CP047492.1 Protein Homology CDS 3174054 3175391 . - 0 ID=cds-WP_011259480.1-2;Parent=gene-IXO1104_RS14525;Dbxref=Genbank:WP_011259480.1;Name=WP_011259480.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=IXO1104_RS14525;product=xylose isomerase;protein_id=WP_011259480.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3175439 3176932 . - . ID=gene-IXO1104_RS14530;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14530;old_locus_tag=IXO1104_14500 NZ_CP047492.1 Protein Homology CDS 3175439 3176932 . - 0 ID=cds-WP_011408872.1;Parent=gene-IXO1104_RS14530;Dbxref=Genbank:WP_011408872.1;Name=WP_011408872.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343898.1;locus_tag=IXO1104_RS14530;product=xylulokinase;protein_id=WP_011408872.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3176929 3178058 . - . ID=gene-IXO1104_RS14535;Name=IXO1104_RS14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14535;old_locus_tag=IXO1104_14505;pseudo=true NZ_CP047492.1 Protein Homology CDS 3176929 3178058 . - 0 ID=cds-IXO1104_RS14535;Parent=gene-IXO1104_RS14535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924393.1;locus_tag=IXO1104_RS14535;product=glycoside hydrolase family 95 protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3178150 3181053 . - . ID=gene-IXO1104_RS14540;Name=IXO1104_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14540;old_locus_tag=IXO1104_14510 NZ_CP047492.1 Protein Homology CDS 3178150 3181053 . - 0 ID=cds-WP_011259484.1;Parent=gene-IXO1104_RS14540;Dbxref=Genbank:WP_011259484.1;Name=WP_011259484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114815.1;locus_tag=IXO1104_RS14540;product=DUF5110 domain-containing protein;protein_id=WP_011259484.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3181307 3181657 . + . ID=gene-IXO1104_RS14545;Name=IXO1104_RS14545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14545;old_locus_tag=IXO1104_14515;partial=true;pseudo=true;start_range=.,3181307 NZ_CP047492.1 Protein Homology CDS 3181307 3181657 . + 0 ID=cds-IXO1104_RS14545;Parent=gene-IXO1104_RS14545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156675.1;locus_tag=IXO1104_RS14545;partial=true;product=relaxation protein;pseudo=true;start_range=.,3181307;transl_table=11 NZ_CP047492.1 RefSeq gene 3181855 3182826 . - . ID=gene-IXO1104_RS14550;Name=IXO1104_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14550;old_locus_tag=IXO1104_14520 NZ_CP047492.1 Protein Homology CDS 3181855 3182826 . - 0 ID=cds-WP_011408874.1;Parent=gene-IXO1104_RS14550;Dbxref=Genbank:WP_011408874.1;Name=WP_011408874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365771.1;locus_tag=IXO1104_RS14550;product=LysR family transcriptional regulator;protein_id=WP_011408874.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3183239 3183871 . + . ID=gene-IXO1104_RS14555;Name=IXO1104_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14555;old_locus_tag=IXO1104_14525 NZ_CP047492.1 Protein Homology CDS 3183239 3183871 . + 0 ID=cds-WP_011259487.1;Parent=gene-IXO1104_RS14555;Dbxref=Genbank:WP_011259487.1;Name=WP_011259487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452718.1;locus_tag=IXO1104_RS14555;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_011259487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3183868 3185016 . + . ID=gene-IXO1104_RS14560;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=IXO1104_RS14560;old_locus_tag=IXO1104_14530 NZ_CP047492.1 Protein Homology CDS 3183868 3185016 . + 0 ID=cds-WP_011408875.1;Parent=gene-IXO1104_RS14560;Dbxref=Genbank:WP_011408875.1;Name=WP_011408875.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=IXO1104_RS14560;product=galactonate dehydratase;protein_id=WP_011408875.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3185010 3185921 . + . ID=gene-IXO1104_RS14565;Name=IXO1104_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14565;old_locus_tag=IXO1104_14535 NZ_CP047492.1 Protein Homology CDS 3185010 3185921 . + 0 ID=cds-WP_011259488.1;Parent=gene-IXO1104_RS14565;Dbxref=Genbank:WP_011259488.1;Name=WP_011259488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155129.1;locus_tag=IXO1104_RS14565;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_011259488.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3185918 3186796 . + . ID=gene-IXO1104_RS14570;Name=IXO1104_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14570;old_locus_tag=IXO1104_14540 NZ_CP047492.1 Protein Homology CDS 3185918 3186796 . + 0 ID=cds-WP_011408877.1;Parent=gene-IXO1104_RS14570;Dbxref=Genbank:WP_011408877.1;Name=WP_011408877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167121.1;locus_tag=IXO1104_RS14570;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_011408877.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3186879 3187202 . + . ID=gene-IXO1104_RS14575;Name=IXO1104_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14575;old_locus_tag=IXO1104_14545 NZ_CP047492.1 Protein Homology CDS 3186879 3187202 . + 0 ID=cds-WP_027703713.1;Parent=gene-IXO1104_RS14575;Dbxref=Genbank:WP_027703713.1;Name=WP_027703713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=IXO1104_RS14575;product=ferredoxin family protein;protein_id=WP_027703713.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3187327 3187845 . - . ID=gene-IXO1104_RS14580;Name=IXO1104_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14580;old_locus_tag=IXO1104_14550 NZ_CP047492.1 Protein Homology CDS 3187327 3187845 . - 0 ID=cds-WP_011408878.1;Parent=gene-IXO1104_RS14580;Dbxref=Genbank:WP_011408878.1;Name=WP_011408878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994930.1;locus_tag=IXO1104_RS14580;product=hypothetical protein;protein_id=WP_011408878.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3187862 3188770 . - . ID=gene-IXO1104_RS14585;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14585;old_locus_tag=IXO1104_14555 NZ_CP047492.1 Protein Homology CDS 3187862 3188770 . - 0 ID=cds-WP_011259492.1;Parent=gene-IXO1104_RS14585;Dbxref=Genbank:WP_011259492.1;Name=WP_011259492.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813784.1;locus_tag=IXO1104_RS14585;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011259492.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3188864 3189490 . + . ID=gene-IXO1104_RS14590;Name=IXO1104_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14590;old_locus_tag=IXO1104_14560 NZ_CP047492.1 Protein Homology CDS 3188864 3189490 . + 0 ID=cds-WP_011259493.1;Parent=gene-IXO1104_RS14590;Dbxref=Genbank:WP_011259493.1;Name=WP_011259493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503111.1;locus_tag=IXO1104_RS14590;product=glycine cleavage system protein R;protein_id=WP_011259493.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3189502 3189852 . + . ID=gene-IXO1104_RS14595;Name=IXO1104_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14595;old_locus_tag=IXO1104_14565 NZ_CP047492.1 Protein Homology CDS 3189502 3189852 . + 0 ID=cds-WP_011259494.1;Parent=gene-IXO1104_RS14595;Dbxref=Genbank:WP_011259494.1;Name=WP_011259494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300297.1;locus_tag=IXO1104_RS14595;product=ribonuclease E inhibitor RraB;protein_id=WP_011259494.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3189890 3190372 . + . ID=gene-IXO1104_RS14600;Name=IXO1104_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14600;old_locus_tag=IXO1104_14570 NZ_CP047492.1 Protein Homology CDS 3189890 3190372 . + 0 ID=cds-WP_011259495.1;Parent=gene-IXO1104_RS14600;Dbxref=Genbank:WP_011259495.1;Name=WP_011259495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481906.1;locus_tag=IXO1104_RS14600;product=peroxiredoxin;protein_id=WP_011259495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3190455 3191852 . + . ID=gene-IXO1104_RS14605;Name=IXO1104_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14605;old_locus_tag=IXO1104_14575 NZ_CP047492.1 Protein Homology CDS 3190455 3191852 . + 0 ID=cds-WP_011259496.1;Parent=gene-IXO1104_RS14605;Dbxref=Genbank:WP_011259496.1;Name=WP_011259496.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365742.1;locus_tag=IXO1104_RS14605;product=PhoH family protein;protein_id=WP_011259496.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3191852 3192334 . + . ID=gene-IXO1104_RS14610;Name=IXO1104_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14610;old_locus_tag=IXO1104_14580 NZ_CP047492.1 Protein Homology CDS 3191852 3192334 . + 0 ID=cds-WP_011408879.1;Parent=gene-IXO1104_RS14610;Dbxref=Genbank:WP_011408879.1;Name=WP_011408879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503108.1;locus_tag=IXO1104_RS14610;product=hypothetical protein;protein_id=WP_011408879.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3192419 3193228 . + . ID=gene-IXO1104_RS14615;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=IXO1104_RS14615;old_locus_tag=IXO1104_14585 NZ_CP047492.1 Protein Homology CDS 3192419 3193228 . + 0 ID=cds-WP_075239451.1;Parent=gene-IXO1104_RS14615;Dbxref=Genbank:WP_075239451.1;Name=WP_075239451.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481896.1;locus_tag=IXO1104_RS14615;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_075239451.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3193225 3194088 . + . ID=gene-IXO1104_RS14620;Name=IXO1104_RS14620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14620;pseudo=true NZ_CP047492.1 Protein Homology CDS 3193225 3194088 . + 0 ID=cds-IXO1104_RS14620;Parent=gene-IXO1104_RS14620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966754.1;locus_tag=IXO1104_RS14620;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3194129 3194205 . + . ID=gene-IXO1104_RS14625;Name=IXO1104_RS14625;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS14625;old_locus_tag=IXO1104_14600 NZ_CP047492.1 tRNAscan-SE tRNA 3194129 3194205 . + . ID=rna-IXO1104_RS14625;Parent=gene-IXO1104_RS14625;anticodon=(pos:3194163..3194165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14625;product=tRNA-Arg NZ_CP047492.1 tRNAscan-SE exon 3194129 3194205 . + . ID=exon-IXO1104_RS14625-1;Parent=rna-IXO1104_RS14625;anticodon=(pos:3194163..3194165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14625;product=tRNA-Arg NZ_CP047492.1 RefSeq gene 3194299 3194375 . + . ID=gene-IXO1104_RS14630;Name=IXO1104_RS14630;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS14630;old_locus_tag=IXO1104_14605 NZ_CP047492.1 tRNAscan-SE tRNA 3194299 3194375 . + . ID=rna-IXO1104_RS14630;Parent=gene-IXO1104_RS14630;anticodon=(pos:3194333..3194335);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14630;product=tRNA-Arg NZ_CP047492.1 tRNAscan-SE exon 3194299 3194375 . + . ID=exon-IXO1104_RS14630-1;Parent=rna-IXO1104_RS14630;anticodon=(pos:3194333..3194335);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14630;product=tRNA-Arg NZ_CP047492.1 RefSeq gene 3194543 3195529 . - . ID=gene-IXO1104_RS14635;Name=IXO1104_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14635;old_locus_tag=IXO1104_14610 NZ_CP047492.1 Protein Homology CDS 3194543 3195529 . - 0 ID=cds-WP_075240591.1;Parent=gene-IXO1104_RS14635;Dbxref=Genbank:WP_075240591.1;Name=WP_075240591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155120.1;locus_tag=IXO1104_RS14635;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_075240591.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3195574 3196518 . - . ID=gene-IXO1104_RS14640;Name=IXO1104_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14640;old_locus_tag=IXO1104_14615 NZ_CP047492.1 Protein Homology CDS 3195574 3196518 . - 0 ID=cds-WP_011259501.1;Parent=gene-IXO1104_RS14640;Dbxref=Genbank:WP_011259501.1;Name=WP_011259501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503104.1;locus_tag=IXO1104_RS14640;product=LysR substrate-binding domain-containing protein;protein_id=WP_011259501.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3196655 3197356 . + . ID=gene-IXO1104_RS14645;Name=IXO1104_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14645;old_locus_tag=IXO1104_14620 NZ_CP047492.1 Protein Homology CDS 3196655 3197356 . + 0 ID=cds-WP_011259502.1;Parent=gene-IXO1104_RS14645;Dbxref=Genbank:WP_011259502.1;Name=WP_011259502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966758.1;locus_tag=IXO1104_RS14645;product=pirin family protein;protein_id=WP_011259502.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3197502 3197687 . - . ID=gene-IXO1104_RS14650;Name=IXO1104_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14650 NZ_CP047492.1 GeneMarkS-2+ CDS 3197502 3197687 . - 0 ID=cds-WP_012444564.1;Parent=gene-IXO1104_RS14650;Dbxref=Genbank:WP_012444564.1;Name=WP_012444564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS14650;product=hypothetical protein;protein_id=WP_012444564.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3197789 3198058 . - . ID=gene-IXO1104_RS14655;Name=IXO1104_RS14655;end_range=3198058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14655;old_locus_tag=IXO1104_14630;partial=true;pseudo=true;start_range=.,3197789 NZ_CP047492.1 Protein Homology CDS 3197789 3198058 . - 0 ID=cds-IXO1104_RS14655;Parent=gene-IXO1104_RS14655;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009253,GO:0016998,GO:0003796;end_range=3198058,.;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503645.1;locus_tag=IXO1104_RS14655;partial=true;product=glycoside hydrolase family protein;pseudo=true;start_range=.,3197789;transl_table=11 NZ_CP047492.1 RefSeq gene 3198037 3198835 . - . ID=gene-IXO1104_RS14660;Name=IXO1104_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14660;old_locus_tag=IXO1104_14635 NZ_CP047492.1 Protein Homology CDS 3198564 3198835 . - 0 ID=cds-WP_094187728.1-7;Parent=gene-IXO1104_RS14660;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14660;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3198037 3198565 . - 1 ID=cds-WP_094187728.1-7;Parent=gene-IXO1104_RS14660;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14660;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3198881 3199108 . - . ID=gene-IXO1104_RS14665;Name=IXO1104_RS14665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS14665;old_locus_tag=IXO1104_14640;partial=true;pseudo=true;start_range=.,3198881 NZ_CP047492.1 Protein Homology CDS 3198881 3199108 . - 0 ID=cds-IXO1104_RS14665;Parent=gene-IXO1104_RS14665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503645.1;locus_tag=IXO1104_RS14665;partial=true;product=lysozyme;pseudo=true;start_range=.,3198881;transl_table=11 NZ_CP047492.1 RefSeq gene 3199352 3200101 . - . ID=gene-IXO1104_RS14670;Name=IXO1104_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14670;old_locus_tag=IXO1104_14645 NZ_CP047492.1 Protein Homology CDS 3199352 3200101 . - 0 ID=cds-WP_011259505.1;Parent=gene-IXO1104_RS14670;Dbxref=Genbank:WP_011259505.1;Name=WP_011259505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259505.1;locus_tag=IXO1104_RS14670;product=isopentenyl transferase;protein_id=WP_011259505.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3200106 3200801 . - . ID=gene-IXO1104_RS14675;Name=IXO1104_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14675;old_locus_tag=IXO1104_14650 NZ_CP047492.1 Protein Homology CDS 3200106 3200801 . - 0 ID=cds-WP_012444561.1;Parent=gene-IXO1104_RS14675;Dbxref=Genbank:WP_012444561.1;Name=WP_012444561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408881.1;locus_tag=IXO1104_RS14675;product=replicative DNA helicase;protein_id=WP_012444561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3200987 3201310 . - . ID=gene-IXO1104_RS14680;Name=IXO1104_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14680;old_locus_tag=IXO1104_14655 NZ_CP047492.1 Protein Homology CDS 3200987 3201310 . - 0 ID=cds-WP_240320993.1;Parent=gene-IXO1104_RS14680;Dbxref=Genbank:WP_240320993.1;Name=WP_240320993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300766.1;locus_tag=IXO1104_RS14680;product=hypothetical protein;protein_id=WP_240320993.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3201674 3202093 . - . ID=gene-IXO1104_RS14685;Name=IXO1104_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14685;old_locus_tag=IXO1104_14660 NZ_CP047492.1 Protein Homology CDS 3201674 3202093 . - 0 ID=cds-WP_027703572.1;Parent=gene-IXO1104_RS14685;Dbxref=Genbank:WP_027703572.1;Name=WP_027703572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408882.1;locus_tag=IXO1104_RS14685;product=helix-turn-helix domain-containing protein;protein_id=WP_027703572.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3202624 3202716 . - . ID=gene-IXO1104_RS14690;Name=IXO1104_RS14690;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS14690;old_locus_tag=IXO1104_14665 NZ_CP047492.1 tRNAscan-SE tRNA 3202624 3202716 . - . ID=rna-IXO1104_RS14690;Parent=gene-IXO1104_RS14690;anticodon=(pos:complement(3202680..3202682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14690;product=tRNA-Ser NZ_CP047492.1 tRNAscan-SE exon 3202624 3202716 . - . ID=exon-IXO1104_RS14690-1;Parent=rna-IXO1104_RS14690;anticodon=(pos:complement(3202680..3202682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS14690;product=tRNA-Ser NZ_CP047492.1 RefSeq gene 3202804 3203016 . - . ID=gene-IXO1104_RS14695;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14695;old_locus_tag=IXO1104_14670 NZ_CP047492.1 Protein Homology CDS 3202804 3203016 . - 0 ID=cds-WP_003481884.1;Parent=gene-IXO1104_RS14695;Dbxref=Genbank:WP_003481884.1;Name=WP_003481884.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481884.1;locus_tag=IXO1104_RS14695;product=carbon storage regulator CsrA;protein_id=WP_003481884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3203156 3205804 . - . ID=gene-IXO1104_RS14700;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=IXO1104_RS14700;old_locus_tag=IXO1104_14675 NZ_CP047492.1 Protein Homology CDS 3203156 3205804 . - 0 ID=cds-WP_011259507.1;Parent=gene-IXO1104_RS14700;Dbxref=Genbank:WP_011259507.1;Name=WP_011259507.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347112.1;locus_tag=IXO1104_RS14700;product=alanine--tRNA ligase;protein_id=WP_011259507.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3205906 3206394 . - . ID=gene-IXO1104_RS14705;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=IXO1104_RS14705;old_locus_tag=IXO1104_14680 NZ_CP047492.1 Protein Homology CDS 3205906 3206394 . - 0 ID=cds-WP_012444556.1;Parent=gene-IXO1104_RS14705;Dbxref=Genbank:WP_012444556.1;Name=WP_012444556.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966764.1;locus_tag=IXO1104_RS14705;product=recombination regulator RecX;protein_id=WP_012444556.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3206697 3207731 . - . ID=gene-IXO1104_RS14710;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14710;old_locus_tag=IXO1104_14685 NZ_CP047492.1 Protein Homology CDS 3206697 3207731 . - 0 ID=cds-WP_011408884.1;Parent=gene-IXO1104_RS14710;Dbxref=Genbank:WP_011408884.1;Name=WP_011408884.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051113.1;locus_tag=IXO1104_RS14710;product=recombinase RecA;protein_id=WP_011408884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3207904 3208545 . - . ID=gene-IXO1104_RS14715;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14715;old_locus_tag=IXO1104_14690 NZ_CP047492.1 Protein Homology CDS 3207904 3208545 . - 0 ID=cds-WP_011408885.1;Parent=gene-IXO1104_RS14715;Dbxref=Genbank:WP_011408885.1;Name=WP_011408885.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269877.1;locus_tag=IXO1104_RS14715;product=transcriptional repressor LexA;protein_id=WP_011408885.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3208634 3210310 . - . ID=gene-IXO1104_RS14720;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14720;old_locus_tag=IXO1104_14695 NZ_CP047492.1 Protein Homology CDS 3208634 3210310 . - 0 ID=cds-WP_011408886.1;Parent=gene-IXO1104_RS14720;Dbxref=Genbank:WP_011408886.1;Name=WP_011408886.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155111.1;locus_tag=IXO1104_RS14720;product=2-polyprenylphenol 6-hydroxylase;protein_id=WP_011408886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3210788 3211282 . - . ID=gene-IXO1104_RS14725;Name=IXO1104_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14725;old_locus_tag=IXO1104_14700 NZ_CP047492.1 Protein Homology CDS 3210788 3211282 . - 0 ID=cds-WP_011259512.1;Parent=gene-IXO1104_RS14725;Dbxref=Genbank:WP_011259512.1;Name=WP_011259512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481865.1;locus_tag=IXO1104_RS14725;product=CinA family protein;protein_id=WP_011259512.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3211714 3213033 . - . ID=gene-IXO1104_RS14730;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=IXO1104_RS14730;old_locus_tag=IXO1104_14705 NZ_CP047492.1 Protein Homology CDS 3211714 3213033 . - 0 ID=cds-WP_011259513.1;Parent=gene-IXO1104_RS14730;Dbxref=Genbank:WP_011259513.1;Name=WP_011259513.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503654.1;locus_tag=IXO1104_RS14730;product=GTPase HflX;protein_id=WP_011259513.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3213045 3213323 . - . ID=gene-IXO1104_RS14735;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=IXO1104_RS14735;old_locus_tag=IXO1104_14710 NZ_CP047492.1 Protein Homology CDS 3213045 3213323 . - 0 ID=cds-WP_005915027.1;Parent=gene-IXO1104_RS14735;Dbxref=Genbank:WP_005915027.1;Name=WP_005915027.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801494.1;locus_tag=IXO1104_RS14735;product=RNA chaperone Hfq;protein_id=WP_005915027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3213401 3214384 . - . ID=gene-IXO1104_RS14740;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14740;old_locus_tag=IXO1104_14715 NZ_CP047492.1 Protein Homology CDS 3213401 3214384 . - 0 ID=cds-WP_012444553.1;Parent=gene-IXO1104_RS14740;Dbxref=Genbank:WP_012444553.1;Name=WP_012444553.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155109.1;locus_tag=IXO1104_RS14740;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_012444553.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3214384 3215286 . - . ID=gene-IXO1104_RS14745;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=IXO1104_RS14745;old_locus_tag=IXO1104_14720 NZ_CP047492.1 Protein Homology CDS 3214384 3215286 . - 0 ID=cds-WP_075239861.1;Parent=gene-IXO1104_RS14745;Dbxref=Genbank:WP_075239861.1;Name=WP_075239861.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453304.1;locus_tag=IXO1104_RS14745;product=dihydropteroate synthase;protein_id=WP_075239861.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3215406 3217346 . - . ID=gene-IXO1104_RS14750;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=IXO1104_RS14750;old_locus_tag=IXO1104_14725 NZ_CP047492.1 Protein Homology CDS 3215406 3217346 . - 0 ID=cds-WP_012444551.1;Parent=gene-IXO1104_RS14750;Dbxref=Genbank:WP_012444551.1;Name=WP_012444551.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481854.1;locus_tag=IXO1104_RS14750;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_012444551.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3217408 3218040 . - . ID=gene-IXO1104_RS14755;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=IXO1104_RS14755;old_locus_tag=IXO1104_14730 NZ_CP047492.1 Protein Homology CDS 3217408 3218040 . - 0 ID=cds-WP_011408890.1;Parent=gene-IXO1104_RS14755;Dbxref=Genbank:WP_011408890.1;Name=WP_011408890.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924322.1;locus_tag=IXO1104_RS14755;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_011408890.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3218107 3218412 . + . ID=gene-IXO1104_RS14760;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=IXO1104_RS14760;old_locus_tag=IXO1104_14735 NZ_CP047492.1 Protein Homology CDS 3218107 3218412 . + 0 ID=cds-WP_011259518.1;Parent=gene-IXO1104_RS14760;Dbxref=Genbank:WP_011259518.1;Name=WP_011259518.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300317.1;locus_tag=IXO1104_RS14760;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_011259518.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3218428 3218802 . + . ID=gene-IXO1104_RS14765;Name=IXO1104_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14765;old_locus_tag=IXO1104_14740 NZ_CP047492.1 Protein Homology CDS 3218428 3218802 . + 0 ID=cds-WP_012444549.1;Parent=gene-IXO1104_RS14765;Dbxref=Genbank:WP_012444549.1;Name=WP_012444549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365690.1;locus_tag=IXO1104_RS14765;product=Mth938-like domain-containing protein;protein_id=WP_012444549.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3218995 3219768 . - . ID=gene-IXO1104_RS14770;Name=IXO1104_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14770;old_locus_tag=IXO1104_14745 NZ_CP047492.1 Protein Homology CDS 3218995 3219768 . - 0 ID=cds-WP_011408891.1;Parent=gene-IXO1104_RS14770;Dbxref=Genbank:WP_011408891.1;Name=WP_011408891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481848.1;locus_tag=IXO1104_RS14770;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_011408891.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3219765 3220379 . - . ID=gene-IXO1104_RS14775;Name=IXO1104_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14775;old_locus_tag=IXO1104_14750 NZ_CP047492.1 Protein Homology CDS 3219765 3220379 . - 0 ID=cds-WP_011259521.1;Parent=gene-IXO1104_RS14775;Dbxref=Genbank:WP_011259521.1;Name=WP_011259521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481846.1;locus_tag=IXO1104_RS14775;product=DedA family protein;protein_id=WP_011259521.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3220398 3221075 . - . ID=gene-IXO1104_RS14780;Name=IXO1104_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14780;old_locus_tag=IXO1104_14755 NZ_CP047492.1 Protein Homology CDS 3220398 3221075 . - 0 ID=cds-WP_011259522.1;Parent=gene-IXO1104_RS14780;Dbxref=Genbank:WP_011259522.1;Name=WP_011259522.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503664.1;locus_tag=IXO1104_RS14780;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_011259522.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3221072 3221851 . - . ID=gene-IXO1104_RS14785;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=IXO1104_RS14785;old_locus_tag=IXO1104_14760 NZ_CP047492.1 Protein Homology CDS 3221072 3221851 . - 0 ID=cds-WP_011408892.1;Parent=gene-IXO1104_RS14785;Dbxref=Genbank:WP_011408892.1;Name=WP_011408892.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305385.1;locus_tag=IXO1104_RS14785;product=5'/3'-nucleotidase SurE;protein_id=WP_011408892.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3221951 3222490 . + . ID=gene-IXO1104_RS14790;Name=IXO1104_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14790;old_locus_tag=IXO1104_14765 NZ_CP047492.1 Protein Homology CDS 3221951 3222490 . + 0 ID=cds-WP_075239862.1;Parent=gene-IXO1104_RS14790;Dbxref=Genbank:WP_075239862.1;Name=WP_075239862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237727.1;locus_tag=IXO1104_RS14790;product=Smr/MutS family protein;protein_id=WP_075239862.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3222807 3223916 . - . ID=gene-IXO1104_RS14795;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=IXO1104_RS14795;old_locus_tag=IXO1104_14770 NZ_CP047492.1 Protein Homology CDS 3222807 3223916 . - 0 ID=cds-WP_075239864.1;Parent=gene-IXO1104_RS14795;Dbxref=Genbank:WP_075239864.1;Name=WP_075239864.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503666.1;locus_tag=IXO1104_RS14795;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_075239864.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3224037 3224528 . - . ID=gene-IXO1104_RS14800;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=IXO1104_RS14800;old_locus_tag=IXO1104_14775 NZ_CP047492.1 Protein Homology CDS 3224037 3224528 . - 0 ID=cds-WP_011259526.1;Parent=gene-IXO1104_RS14800;Dbxref=Genbank:WP_011259526.1;Name=WP_011259526.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453316.1;locus_tag=IXO1104_RS14800;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_011259526.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3224551 3224624 . - . ID=gene-IXO1104_RS14805;Name=IXO1104_RS14805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14805;old_locus_tag=IXO1104_14780 NZ_CP047492.1 cmsearch ncRNA 3224551 3224624 . - . ID=rna-IXO1104_RS14805;Parent=gene-IXO1104_RS14805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14805;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3224551 3224624 . - . ID=exon-IXO1104_RS14805-1;Parent=rna-IXO1104_RS14805;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14805;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3224684 3225502 . - . ID=gene-IXO1104_RS14810;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=IXO1104_RS14810;old_locus_tag=IXO1104_14785 NZ_CP047492.1 Protein Homology CDS 3224684 3225502 . - 0 ID=cds-WP_011259527.1;Parent=gene-IXO1104_RS14810;Dbxref=Genbank:WP_011259527.1;Name=WP_011259527.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503668.1;locus_tag=IXO1104_RS14810;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_011259527.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3225499 3225864 . - . ID=gene-IXO1104_RS14815;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS14815;old_locus_tag=IXO1104_14790 NZ_CP047492.1 Protein Homology CDS 3225499 3225864 . - 0 ID=cds-WP_011259528.1;Parent=gene-IXO1104_RS14815;Dbxref=Genbank:WP_011259528.1;Name=WP_011259528.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259528.1;locus_tag=IXO1104_RS14815;product=cell division protein FtsB;protein_id=WP_011259528.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3225868 3227160 . - . ID=gene-IXO1104_RS14820;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=IXO1104_RS14820;old_locus_tag=IXO1104_14795 NZ_CP047492.1 Protein Homology CDS 3225868 3227160 . - 0 ID=cds-WP_011408895.1;Parent=gene-IXO1104_RS14820;Dbxref=Genbank:WP_011408895.1;Name=WP_011408895.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808113.1;locus_tag=IXO1104_RS14820;product=phosphopyruvate hydratase;protein_id=WP_011408895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3227285 3227527 . - . ID=gene-IXO1104_RS14825;Name=IXO1104_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14825;old_locus_tag=IXO1104_14800 NZ_CP047492.1 Protein Homology CDS 3227285 3227527 . - 0 ID=cds-WP_027703575.1;Parent=gene-IXO1104_RS14825;Dbxref=Genbank:WP_027703575.1;Name=WP_027703575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169875.1;locus_tag=IXO1104_RS14825;product=hypothetical protein;protein_id=WP_027703575.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3227644 3228474 . - . ID=gene-IXO1104_RS14830;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS14830;old_locus_tag=IXO1104_14805 NZ_CP047492.1 Protein Homology CDS 3227644 3228474 . - 0 ID=cds-WP_011259531.1;Parent=gene-IXO1104_RS14830;Dbxref=Genbank:WP_011259531.1;Name=WP_011259531.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992423.1;locus_tag=IXO1104_RS14830;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_011259531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3228678 3230342 . - . ID=gene-IXO1104_RS14835;Name=IXO1104_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14835;old_locus_tag=IXO1104_14810 NZ_CP047492.1 Protein Homology CDS 3228678 3230342 . - 0 ID=cds-WP_011259532.1;Parent=gene-IXO1104_RS14835;Dbxref=Genbank:WP_011259532.1;Name=WP_011259532.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481821.1;locus_tag=IXO1104_RS14835;product=CTP synthase;protein_id=WP_011259532.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3230517 3230759 . - . ID=gene-IXO1104_RS14840;Name=IXO1104_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14840;old_locus_tag=IXO1104_14815 NZ_CP047492.1 Protein Homology CDS 3230517 3230759 . - 0 ID=cds-WP_011259533.1;Parent=gene-IXO1104_RS14840;Dbxref=Genbank:WP_011259533.1;Name=WP_011259533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481819.1;locus_tag=IXO1104_RS14840;product=hypothetical protein;protein_id=WP_011259533.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3230924 3232813 . + . ID=gene-IXO1104_RS14845;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=IXO1104_RS14845;old_locus_tag=IXO1104_14820 NZ_CP047492.1 Protein Homology CDS 3230924 3232813 . + 0 ID=cds-WP_011408898.1;Parent=gene-IXO1104_RS14845;Dbxref=Genbank:WP_011408898.1;Name=WP_011408898.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=IXO1104_RS14845;product=DNA topoisomerase IV subunit B;protein_id=WP_011408898.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3232832 3233630 . - . ID=gene-IXO1104_RS14850;Name=IXO1104_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14850;old_locus_tag=IXO1104_14825 NZ_CP047492.1 Protein Homology CDS 3233359 3233630 . - 0 ID=cds-WP_094187731.1;Parent=gene-IXO1104_RS14850;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14850;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3232832 3233360 . - 1 ID=cds-WP_094187731.1;Parent=gene-IXO1104_RS14850;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS14850;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3234044 3235552 . + . ID=gene-IXO1104_RS14855;Name=IXO1104_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14855;old_locus_tag=IXO1104_14830 NZ_CP047492.1 Protein Homology CDS 3234044 3235552 . + 0 ID=cds-WP_011259536.1;Parent=gene-IXO1104_RS14855;Dbxref=Genbank:WP_011259536.1;Name=WP_011259536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166236.1;locus_tag=IXO1104_RS14855;product=S10 family peptidase;protein_id=WP_011259536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3235610 3236371 . - . ID=gene-IXO1104_RS14860;Name=IXO1104_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14860;old_locus_tag=IXO1104_14835 NZ_CP047492.1 Protein Homology CDS 3235610 3236371 . - 0 ID=cds-WP_011408900.1;Parent=gene-IXO1104_RS14860;Dbxref=Genbank:WP_011408900.1;Name=WP_011408900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155090.1;locus_tag=IXO1104_RS14860;product=YdcF family protein;protein_id=WP_011408900.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3236448 3237575 . - . ID=gene-IXO1104_RS14865;Name=IXO1104_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14865;old_locus_tag=IXO1104_14840 NZ_CP047492.1 Protein Homology CDS 3236448 3237575 . - 0 ID=cds-WP_011259538.1;Parent=gene-IXO1104_RS14865;Dbxref=Genbank:WP_011259538.1;Name=WP_011259538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914989.1;locus_tag=IXO1104_RS14865;product=inorganic phosphate transporter;protein_id=WP_011259538.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3237585 3238211 . - . ID=gene-IXO1104_RS14870;Name=IXO1104_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14870;old_locus_tag=IXO1104_14845 NZ_CP047492.1 Protein Homology CDS 3237585 3238211 . - 0 ID=cds-WP_011408901.1;Parent=gene-IXO1104_RS14870;Dbxref=Genbank:WP_011408901.1;Name=WP_011408901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992439.1;locus_tag=IXO1104_RS14870;product=DUF47 family protein;protein_id=WP_011408901.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3238484 3239824 . + . ID=gene-IXO1104_RS14875;Name=IXO1104_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14875;old_locus_tag=IXO1104_14850 NZ_CP047492.1 Protein Homology CDS 3238484 3239824 . + 0 ID=cds-WP_011259540.1;Parent=gene-IXO1104_RS14875;Dbxref=Genbank:WP_011259540.1;Name=WP_011259540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051102.1;locus_tag=IXO1104_RS14875;product=hemolysin family protein;protein_id=WP_011259540.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3239808 3240476 . + . ID=gene-IXO1104_RS14880;Name=IXO1104_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14880;old_locus_tag=IXO1104_14855 NZ_CP047492.1 Protein Homology CDS 3239808 3240476 . + 0 ID=cds-WP_011259541.1;Parent=gene-IXO1104_RS14880;Dbxref=Genbank:WP_011259541.1;Name=WP_011259541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301803.1;locus_tag=IXO1104_RS14880;product=exopolysaccharide biosynthesis protein;protein_id=WP_011259541.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3240508 3241008 . - . ID=gene-IXO1104_RS14885;Name=IXO1104_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14885;old_locus_tag=IXO1104_14860 NZ_CP047492.1 Protein Homology CDS 3240508 3241008 . - 0 ID=cds-WP_011259542.1;Parent=gene-IXO1104_RS14885;Dbxref=Genbank:WP_011259542.1;Name=WP_011259542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966811.1;locus_tag=IXO1104_RS14885;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_011259542.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3241069 3242070 . - . ID=gene-IXO1104_RS14890;Name=IXO1104_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14890;old_locus_tag=IXO1104_14865 NZ_CP047492.1 Protein Homology CDS 3241069 3242070 . - 0 ID=cds-WP_027703447.1;Parent=gene-IXO1104_RS14890;Dbxref=Genbank:WP_027703447.1;Name=WP_027703447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155084.1;locus_tag=IXO1104_RS14890;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_027703447.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3242386 3242462 . + . ID=gene-IXO1104_RS14895;Name=IXO1104_RS14895;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14895;old_locus_tag=IXO1104_14870 NZ_CP047492.1 cmsearch ncRNA 3242386 3242462 . + . ID=rna-IXO1104_RS14895;Parent=gene-IXO1104_RS14895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14895;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3242386 3242462 . + . ID=exon-IXO1104_RS14895-1;Parent=rna-IXO1104_RS14895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14895;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3242875 3244290 . + . ID=gene-IXO1104_RS14900;Name=IXO1104_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14900;old_locus_tag=IXO1104_14875 NZ_CP047492.1 Protein Homology CDS 3242875 3244290 . + 0 ID=cds-WP_011259544.1;Parent=gene-IXO1104_RS14900;Dbxref=Genbank:WP_011259544.1;Name=WP_011259544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503687.1;locus_tag=IXO1104_RS14900;product=MFS transporter;protein_id=WP_011259544.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3244407 3244483 . - . ID=gene-IXO1104_RS14905;Name=IXO1104_RS14905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS14905;old_locus_tag=IXO1104_14880 NZ_CP047492.1 cmsearch ncRNA 3244407 3244483 . - . ID=rna-IXO1104_RS14905;Parent=gene-IXO1104_RS14905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14905;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3244407 3244483 . - . ID=exon-IXO1104_RS14905-1;Parent=rna-IXO1104_RS14905;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS14905;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3244598 3246319 . - . ID=gene-IXO1104_RS14910;Name=IXO1104_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14910;old_locus_tag=IXO1104_14885 NZ_CP047492.1 Protein Homology CDS 3244598 3246319 . - 0 ID=cds-WP_012444535.1;Parent=gene-IXO1104_RS14910;Dbxref=Genbank:WP_012444535.1;Name=WP_012444535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117562.1;locus_tag=IXO1104_RS14910;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012444535.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3246413 3247471 . - . ID=gene-IXO1104_RS14915;Name=IXO1104_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14915;old_locus_tag=IXO1104_14890 NZ_CP047492.1 Protein Homology CDS 3246413 3247471 . - 0 ID=cds-WP_011408904.1;Parent=gene-IXO1104_RS14915;Dbxref=Genbank:WP_011408904.1;Name=WP_011408904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408904.1;locus_tag=IXO1104_RS14915;product=hypothetical protein;protein_id=WP_011408904.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3247604 3249124 . + . ID=gene-IXO1104_RS14920;Name=IXO1104_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14920;old_locus_tag=IXO1104_14895 NZ_CP047492.1 Protein Homology CDS 3247604 3249124 . + 0 ID=cds-WP_012444533.1;Parent=gene-IXO1104_RS14920;Dbxref=Genbank:WP_012444533.1;Name=WP_012444533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304795.1;locus_tag=IXO1104_RS14920;product=B12-binding domain-containing radical SAM protein;protein_id=WP_012444533.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3249214 3250428 . + . ID=gene-IXO1104_RS14925;Name=IXO1104_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14925;old_locus_tag=IXO1104_14900 NZ_CP047492.1 Protein Homology CDS 3249214 3250428 . + 0 ID=cds-WP_011259548.1;Parent=gene-IXO1104_RS14925;Dbxref=Genbank:WP_011259548.1;Name=WP_011259548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155079.1;locus_tag=IXO1104_RS14925;product=nucleotidyltransferase family protein;protein_id=WP_011259548.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3250532 3251644 . - . ID=gene-IXO1104_RS14930;Name=IXO1104_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14930;old_locus_tag=IXO1104_14905 NZ_CP047492.1 Protein Homology CDS 3250532 3251644 . - 0 ID=cds-WP_011259549.1;Parent=gene-IXO1104_RS14930;Dbxref=Genbank:WP_011259549.1;Name=WP_011259549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259549.1;locus_tag=IXO1104_RS14930;product=glycosyltransferase family 4 protein;protein_id=WP_011259549.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3251641 3252771 . - . ID=gene-IXO1104_RS14935;Name=IXO1104_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14935;old_locus_tag=IXO1104_14910 NZ_CP047492.1 Protein Homology CDS 3251641 3252771 . - 0 ID=cds-WP_027703448.1;Parent=gene-IXO1104_RS14935;Dbxref=Genbank:WP_027703448.1;Name=WP_027703448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378292.1;locus_tag=IXO1104_RS14935;product=glycosyltransferase family 4 protein;protein_id=WP_027703448.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3252893 3253591 . - . ID=gene-IXO1104_RS14940;Name=IXO1104_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14940;old_locus_tag=IXO1104_14915 NZ_CP047492.1 Protein Homology CDS 3252893 3253591 . - 0 ID=cds-WP_011408908.1;Parent=gene-IXO1104_RS14940;Dbxref=Genbank:WP_011408908.1;Name=WP_011408908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155076.1;locus_tag=IXO1104_RS14940;product=class I SAM-dependent methyltransferase;protein_id=WP_011408908.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3253588 3254823 . - . ID=gene-IXO1104_RS14945;Name=IXO1104_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14945;old_locus_tag=IXO1104_14920 NZ_CP047492.1 Protein Homology CDS 3253588 3254823 . - 0 ID=cds-WP_075239938.1;Parent=gene-IXO1104_RS14945;Dbxref=Genbank:WP_075239938.1;Name=WP_075239938.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159163.1;locus_tag=IXO1104_RS14945;product=amidohydrolase family protein;protein_id=WP_075239938.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3254836 3255678 . - . ID=gene-IXO1104_RS14950;Name=IXO1104_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14950;old_locus_tag=IXO1104_14925 NZ_CP047492.1 Protein Homology CDS 3254836 3255678 . - 0 ID=cds-WP_075239935.1;Parent=gene-IXO1104_RS14950;Dbxref=Genbank:WP_075239935.1;Name=WP_075239935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966827.1;locus_tag=IXO1104_RS14950;product=class I SAM-dependent methyltransferase;protein_id=WP_075239935.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3255959 3256810 . - . ID=gene-IXO1104_RS14955;Name=IXO1104_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14955;old_locus_tag=IXO1104_14930 NZ_CP047492.1 Protein Homology CDS 3255959 3256810 . - 0 ID=cds-WP_075239936.1;Parent=gene-IXO1104_RS14955;Dbxref=Genbank:WP_075239936.1;Name=WP_075239936.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301333.1;locus_tag=IXO1104_RS14955;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_075239936.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3256856 3257989 . - . ID=gene-IXO1104_RS14960;Name=IXO1104_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14960;old_locus_tag=IXO1104_14935 NZ_CP047492.1 Protein Homology CDS 3256856 3257989 . - 0 ID=cds-WP_075239939.1;Parent=gene-IXO1104_RS14960;Dbxref=Genbank:WP_075239939.1;Name=WP_075239939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924253.1;locus_tag=IXO1104_RS14960;product=hypothetical protein;protein_id=WP_075239939.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3257986 3258936 . - . ID=gene-IXO1104_RS14965;Name=IXO1104_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14965;old_locus_tag=IXO1104_14940 NZ_CP047492.1 Protein Homology CDS 3257986 3258936 . - 0 ID=cds-WP_011259555.1;Parent=gene-IXO1104_RS14965;Dbxref=Genbank:WP_011259555.1;Name=WP_011259555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089954.1;locus_tag=IXO1104_RS14965;product=glycosyltransferase;protein_id=WP_011259555.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3258933 3260186 . - . ID=gene-IXO1104_RS14970;Name=IXO1104_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14970;old_locus_tag=IXO1104_14945 NZ_CP047492.1 Protein Homology CDS 3258933 3260186 . - 0 ID=cds-WP_012444530.1;Parent=gene-IXO1104_RS14970;Dbxref=Genbank:WP_012444530.1;Name=WP_012444530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089953.1;locus_tag=IXO1104_RS14970;product=O-antigen translocase;protein_id=WP_012444530.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3260183 3261307 . - . ID=gene-IXO1104_RS14975;Name=IXO1104_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14975;old_locus_tag=IXO1104_14950 NZ_CP047492.1 Protein Homology CDS 3260183 3261307 . - 0 ID=cds-WP_011259557.1;Parent=gene-IXO1104_RS14975;Dbxref=Genbank:WP_011259557.1;Name=WP_011259557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452982.1;locus_tag=IXO1104_RS14975;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_011259557.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3261295 3262227 . - . ID=gene-IXO1104_RS14980;Name=IXO1104_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14980;old_locus_tag=IXO1104_14955 NZ_CP047492.1 Protein Homology CDS 3261295 3262227 . - 0 ID=cds-WP_011408912.1;Parent=gene-IXO1104_RS14980;Dbxref=Genbank:WP_011408912.1;Name=WP_011408912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408912.1;locus_tag=IXO1104_RS14980;product=GNAT family N-acetyltransferase;protein_id=WP_011408912.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3262214 3263167 . - . ID=gene-IXO1104_RS14985;Name=IXO1104_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14985;old_locus_tag=IXO1104_14960 NZ_CP047492.1 Protein Homology CDS 3262214 3263167 . - 0 ID=cds-WP_011408913.1;Parent=gene-IXO1104_RS14985;Dbxref=Genbank:WP_011408913.1;Name=WP_011408913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155068.1;locus_tag=IXO1104_RS14985;product=hypothetical protein;protein_id=WP_011408913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3263171 3263842 . - . ID=gene-IXO1104_RS14990;Name=IXO1104_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14990;old_locus_tag=IXO1104_14965 NZ_CP047492.1 Protein Homology CDS 3263171 3263842 . - 0 ID=cds-WP_011408914.1;Parent=gene-IXO1104_RS14990;Dbxref=Genbank:WP_011408914.1;Name=WP_011408914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966838.1;locus_tag=IXO1104_RS14990;product=acetyltransferase;protein_id=WP_011408914.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3263839 3264270 . - . ID=gene-IXO1104_RS14995;Name=IXO1104_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS14995;old_locus_tag=IXO1104_14970 NZ_CP047492.1 Protein Homology CDS 3263839 3264270 . - 0 ID=cds-WP_011259561.1;Parent=gene-IXO1104_RS14995;Dbxref=Genbank:WP_011259561.1;Name=WP_011259561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914950.1;locus_tag=IXO1104_RS14995;product=FdtA/QdtA family cupin domain-containing protein;protein_id=WP_011259561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3264575 3265195 . + . ID=gene-IXO1104_RS15000;Name=IXO1104_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15000;old_locus_tag=IXO1104_14975 NZ_CP047492.1 Protein Homology CDS 3264575 3265195 . + 0 ID=cds-WP_171970769.1;Parent=gene-IXO1104_RS15000;Dbxref=Genbank:WP_171970769.1;Name=WP_171970769.1;Ontology_term=GO:0009055,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089947.1;locus_tag=IXO1104_RS15000;product=cytochrome b/b6 domain-containing protein;protein_id=WP_171970769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3265279 3266619 . + . ID=gene-IXO1104_RS15005;Name=IXO1104_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15005;old_locus_tag=IXO1104_14980 NZ_CP047492.1 Protein Homology CDS 3265279 3266619 . + 0 ID=cds-WP_012444527.1;Parent=gene-IXO1104_RS15005;Dbxref=Genbank:WP_012444527.1;Name=WP_012444527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914948.1;locus_tag=IXO1104_RS15005;product=hypothetical protein;protein_id=WP_012444527.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3266645 3267037 . + . ID=gene-IXO1104_RS15010;Name=IXO1104_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15010;old_locus_tag=IXO1104_14985 NZ_CP047492.1 Protein Homology CDS 3266645 3267037 . + 0 ID=cds-WP_011408918.1;Parent=gene-IXO1104_RS15010;Dbxref=Genbank:WP_011408918.1;Name=WP_011408918.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347070.1;locus_tag=IXO1104_RS15010;product=c-type cytochrome;protein_id=WP_011408918.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3267480 3268268 . + . ID=gene-IXO1104_RS15015;Name=IXO1104_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15015;old_locus_tag=IXO1104_14990 NZ_CP047492.1 Protein Homology CDS 3267480 3268268 . + 0 ID=cds-WP_033013216.1;Parent=gene-IXO1104_RS15015;Dbxref=Genbank:WP_033013216.1;Name=WP_033013216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117552.1;locus_tag=IXO1104_RS15015;product=hypothetical protein;protein_id=WP_033013216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3268320 3268913 . + . ID=gene-IXO1104_RS15020;Name=IXO1104_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15020;old_locus_tag=IXO1104_14995 NZ_CP047492.1 Protein Homology CDS 3268320 3268913 . + 0 ID=cds-WP_011259566.1;Parent=gene-IXO1104_RS15020;Dbxref=Genbank:WP_011259566.1;Name=WP_011259566.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848631.1;locus_tag=IXO1104_RS15020;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011259566.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3268910 3269566 . + . ID=gene-IXO1104_RS15025;Name=IXO1104_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15025;old_locus_tag=IXO1104_15000 NZ_CP047492.1 Protein Homology CDS 3268910 3269566 . + 0 ID=cds-WP_012444524.1;Parent=gene-IXO1104_RS15025;Dbxref=Genbank:WP_012444524.1;Name=WP_012444524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169443.1;locus_tag=IXO1104_RS15025;product=zf-HC2 domain-containing protein;protein_id=WP_012444524.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3269563 3270888 . + . ID=gene-IXO1104_RS15030;Name=IXO1104_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15030;old_locus_tag=IXO1104_15005 NZ_CP047492.1 Protein Homology CDS 3269563 3270888 . + 0 ID=cds-WP_011259567.1;Parent=gene-IXO1104_RS15030;Dbxref=Genbank:WP_011259567.1;Name=WP_011259567.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363686.1;locus_tag=IXO1104_RS15030;product=S8 family serine peptidase;protein_id=WP_011259567.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3270899 3271657 . + . ID=gene-IXO1104_RS15035;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=IXO1104_RS15035;old_locus_tag=IXO1104_15010 NZ_CP047492.1 Protein Homology CDS 3270899 3271657 . + 0 ID=cds-WP_011259568.1;Parent=gene-IXO1104_RS15035;Dbxref=Genbank:WP_011259568.1;Name=WP_011259568.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302345.1;locus_tag=IXO1104_RS15035;product=heme ABC transporter permease CcmC;protein_id=WP_011259568.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3271654 3271860 . + . ID=gene-IXO1104_RS15040;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=IXO1104_RS15040;old_locus_tag=IXO1104_15015 NZ_CP047492.1 Protein Homology CDS 3271654 3271860 . + 0 ID=cds-WP_041182182.1;Parent=gene-IXO1104_RS15040;Dbxref=Genbank:WP_041182182.1;Name=WP_041182182.1;Ontology_term=GO:0015886,GO:0017004,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral component of membrane|0016021||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155059.1;locus_tag=IXO1104_RS15040;product=heme exporter protein CcmD;protein_id=WP_041182182.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3271857 3272327 . + . ID=gene-IXO1104_RS15045;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=IXO1104_RS15045;old_locus_tag=IXO1104_15020 NZ_CP047492.1 Protein Homology CDS 3271857 3272327 . + 0 ID=cds-WP_011259569.1;Parent=gene-IXO1104_RS15045;Dbxref=Genbank:WP_011259569.1;Name=WP_011259569.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155058.1;locus_tag=IXO1104_RS15045;product=cytochrome c maturation protein CcmE;protein_id=WP_011259569.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3272391 3274379 . + . ID=gene-IXO1104_RS15050;Name=IXO1104_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15050;old_locus_tag=IXO1104_15025 NZ_CP047492.1 Protein Homology CDS 3272391 3274379 . + 0 ID=cds-WP_011259570.1;Parent=gene-IXO1104_RS15050;Dbxref=Genbank:WP_011259570.1;Name=WP_011259570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259570.1;locus_tag=IXO1104_RS15050;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_011259570.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3274376 3274918 . + . ID=gene-IXO1104_RS15055;Name=IXO1104_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15055;old_locus_tag=IXO1104_15030 NZ_CP047492.1 Protein Homology CDS 3274376 3274918 . + 0 ID=cds-WP_011259571.1;Parent=gene-IXO1104_RS15055;Dbxref=Genbank:WP_011259571.1;Name=WP_011259571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503717.1;locus_tag=IXO1104_RS15055;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_011259571.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3274918 3275415 . + . ID=gene-IXO1104_RS15060;Name=IXO1104_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15060;old_locus_tag=IXO1104_15035 NZ_CP047492.1 Protein Homology CDS 3274918 3275415 . + 0 ID=cds-WP_027703454.1;Parent=gene-IXO1104_RS15060;Dbxref=Genbank:WP_027703454.1;Name=WP_027703454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914849.1;locus_tag=IXO1104_RS15060;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_027703454.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3275409 3276119 . + . ID=gene-IXO1104_RS15065;Name=IXO1104_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15065;old_locus_tag=IXO1104_15040 NZ_CP047492.1 Protein Homology CDS 3275409 3276119 . + 0 ID=cds-WP_173425340.1;Parent=gene-IXO1104_RS15065;Dbxref=Genbank:WP_173425340.1;Name=WP_173425340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167280.1;locus_tag=IXO1104_RS15065;product=C-type cytochrome biogenesis protein;protein_id=WP_173425340.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3276328 3279945 . + . ID=gene-IXO1104_RS15070;Name=IXO1104_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15070;old_locus_tag=IXO1104_15045 NZ_CP047492.1 Protein Homology CDS 3276328 3279945 . + 0 ID=cds-WP_206737940.1;Parent=gene-IXO1104_RS15070;Dbxref=Genbank:WP_206737940.1;Name=WP_206737940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS15070;product=avirulence protein;protein_id=WP_206737940.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3280214 3280408 . + . ID=gene-IXO1104_RS15075;Name=IXO1104_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15075;old_locus_tag=IXO1104_15050 NZ_CP047492.1 GeneMarkS-2+ CDS 3280214 3280408 . + 0 ID=cds-WP_012444931.1-3;Parent=gene-IXO1104_RS15075;Dbxref=Genbank:WP_012444931.1;Name=WP_012444931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15075;product=hypothetical protein;protein_id=WP_012444931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3280412 3280711 . + . ID=gene-IXO1104_RS15080;Name=IXO1104_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15080;old_locus_tag=IXO1104_15055 NZ_CP047492.1 Protein Homology CDS 3280412 3280711 . + 0 ID=cds-WP_011408491.1-4;Parent=gene-IXO1104_RS15080;Dbxref=Genbank:WP_011408491.1;Name=WP_011408491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS15080;product=hypothetical protein;protein_id=WP_011408491.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3280935 3284654 . + . ID=gene-IXO1104_RS15085;Name=IXO1104_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15085;old_locus_tag=IXO1104_15060 NZ_CP047492.1 Protein Homology CDS 3280935 3284654 . + 0 ID=cds-WP_164994143.1;Parent=gene-IXO1104_RS15085;Dbxref=Genbank:WP_164994143.1;Name=WP_164994143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS15085;product=TAL effector repeat-containing protein;protein_id=WP_164994143.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3284923 3285117 . + . ID=gene-IXO1104_RS15090;Name=IXO1104_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15090;old_locus_tag=IXO1104_15065 NZ_CP047492.1 GeneMarkS-2+ CDS 3284923 3285117 . + 0 ID=cds-WP_041182100.1-3;Parent=gene-IXO1104_RS15090;Dbxref=Genbank:WP_041182100.1;Name=WP_041182100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15090;product=hypothetical protein;protein_id=WP_041182100.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3285121 3285420 . + . ID=gene-IXO1104_RS15095;Name=IXO1104_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15095;old_locus_tag=IXO1104_15070 NZ_CP047492.1 Protein Homology CDS 3285121 3285420 . + 0 ID=cds-WP_164994144.1;Parent=gene-IXO1104_RS15095;Dbxref=Genbank:WP_164994144.1;Name=WP_164994144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS15095;product=hypothetical protein;protein_id=WP_164994144.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3285644 3290074 . + . ID=gene-IXO1104_RS15100;Name=IXO1104_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15100;old_locus_tag=IXO1104_15075 NZ_CP047492.1 Protein Homology CDS 3285644 3290074 . + 0 ID=cds-WP_115877356.1;Parent=gene-IXO1104_RS15100;Dbxref=Genbank:WP_115877356.1;Name=WP_115877356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408929.1;locus_tag=IXO1104_RS15100;product=TAL effector repeat-containing protein;protein_id=WP_115877356.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3290343 3290537 . + . ID=gene-IXO1104_RS15105;Name=IXO1104_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15105;old_locus_tag=IXO1104_15080 NZ_CP047492.1 GeneMarkS-2+ CDS 3290343 3290537 . + 0 ID=cds-WP_012444931.1-4;Parent=gene-IXO1104_RS15105;Dbxref=Genbank:WP_012444931.1;Name=WP_012444931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15105;product=hypothetical protein;protein_id=WP_012444931.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3290541 3290840 . + . ID=gene-IXO1104_RS15110;Name=IXO1104_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15110;old_locus_tag=IXO1104_15085 NZ_CP047492.1 Protein Homology CDS 3290541 3290840 . + 0 ID=cds-WP_011408930.1;Parent=gene-IXO1104_RS15110;Dbxref=Genbank:WP_011408930.1;Name=WP_011408930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408500.1;locus_tag=IXO1104_RS15110;product=hypothetical protein;protein_id=WP_011408930.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3291064 3295184 . + . ID=gene-IXO1104_RS15115;Name=IXO1104_RS15115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15115;old_locus_tag=IXO1104_15090;pseudo=true NZ_CP047492.1 Protein Homology CDS 3291064 3295184 . + 0 ID=cds-IXO1104_RS15115;Parent=gene-IXO1104_RS15115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182630.1;locus_tag=IXO1104_RS15115;product=TAL effector protein PthXo1;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3295388 3295522 . + . ID=gene-IXO1104_RS15120;Name=IXO1104_RS15120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15120;old_locus_tag=IXO1104_15095;partial=true;pseudo=true;start_range=.,3295388 NZ_CP047492.1 Protein Homology CDS 3295388 3295522 . + 0 ID=cds-IXO1104_RS15120;Parent=gene-IXO1104_RS15120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156636.1;locus_tag=IXO1104_RS15120;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,3295388;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3295664 3296230 . - . ID=gene-IXO1104_RS15125;Name=IXO1104_RS15125;end_range=3296230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15125;old_locus_tag=IXO1104_15100;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3295664 3296230 . - 0 ID=cds-IXO1104_RS15125;Parent=gene-IXO1104_RS15125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=3296230,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303959.1;locus_tag=IXO1104_RS15125;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3296247 3297722 . - . ID=gene-IXO1104_RS15130;Name=IXO1104_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15130;old_locus_tag=IXO1104_15105 NZ_CP047492.1 Protein Homology CDS 3296247 3297722 . - 0 ID=cds-WP_012444515.1;Parent=gene-IXO1104_RS15130;Dbxref=Genbank:WP_012444515.1;Name=WP_012444515.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS15130;product=IS5 family transposase;protein_id=WP_012444515.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3297841 3300393 . - . ID=gene-IXO1104_RS15135;Name=IXO1104_RS15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15135;old_locus_tag=IXO1104_15110;partial=true;pseudo=true;start_range=.,3297841 NZ_CP047492.1 Protein Homology CDS 3297841 3300393 . - 0 ID=cds-IXO1104_RS15135;Parent=gene-IXO1104_RS15135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003112801.1;locus_tag=IXO1104_RS15135;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,3297841;transl_table=11 NZ_CP047492.1 RefSeq gene 3300450 3301562 . - . ID=gene-IXO1104_RS15140;Name=IXO1104_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15140;old_locus_tag=IXO1104_15115 NZ_CP047492.1 Protein Homology CDS 3300450 3301562 . - 0 ID=cds-WP_011259580.1;Parent=gene-IXO1104_RS15140;Dbxref=Genbank:WP_011259580.1;Name=WP_011259580.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347613.1;locus_tag=IXO1104_RS15140;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011259580.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3301687 3302265 . + . ID=gene-IXO1104_RS15145;Name=IXO1104_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15145;old_locus_tag=IXO1104_15120 NZ_CP047492.1 Protein Homology CDS 3301687 3302265 . + 0 ID=cds-WP_011259581.1;Parent=gene-IXO1104_RS15145;Dbxref=Genbank:WP_011259581.1;Name=WP_011259581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259581.1;locus_tag=IXO1104_RS15145;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011259581.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3302664 3303089 . - . ID=gene-IXO1104_RS15150;Name=IXO1104_RS15150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15150;partial=true;pseudo=true;start_range=.,3302664 NZ_CP047492.1 Protein Homology CDS 3302664 3303089 . - 0 ID=cds-IXO1104_RS15150;Parent=gene-IXO1104_RS15150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019136.2;locus_tag=IXO1104_RS15150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3302664;transl_table=11 NZ_CP047492.1 RefSeq gene 3303751 3305838 . + . ID=gene-IXO1104_RS15155;Name=IXO1104_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15155;old_locus_tag=IXO1104_15130 NZ_CP047492.1 Protein Homology CDS 3303751 3305838 . + 0 ID=cds-WP_033013403.1;Parent=gene-IXO1104_RS15155;Dbxref=Genbank:WP_033013403.1;Name=WP_033013403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368375.1;locus_tag=IXO1104_RS15155;product=hypothetical protein;protein_id=WP_033013403.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3306225 3307411 . + . ID=gene-IXO1104_RS15160;Name=IXO1104_RS15160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15160;old_locus_tag=IXO1104_15135;pseudo=true NZ_CP047492.1 Protein Homology CDS 3306225 3307411 . + 0 ID=cds-IXO1104_RS15160;Parent=gene-IXO1104_RS15160;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1104_RS15160;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3307862 3310819 . + . ID=gene-IXO1104_RS15165;Name=IXO1104_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15165;old_locus_tag=IXO1104_15140 NZ_CP047492.1 Protein Homology CDS 3307862 3310819 . + 0 ID=cds-WP_241846805.1;Parent=gene-IXO1104_RS15165;Dbxref=Genbank:WP_241846805.1;Name=WP_241846805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408937.1;locus_tag=IXO1104_RS15165;product=histidine kinase;protein_id=WP_241846805.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3310947 3311108 . - . ID=gene-IXO1104_RS15170;Name=IXO1104_RS15170;end_range=3311108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15170;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3310947 3311108 . - 0 ID=cds-IXO1104_RS15170;Parent=gene-IXO1104_RS15170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3311108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611952.1;locus_tag=IXO1104_RS15170;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3311062 3311799 . + . ID=gene-IXO1104_RS15175;Name=IXO1104_RS15175;end_range=3311799,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15175;old_locus_tag=IXO1104_15145;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3311062 3311799 . + 0 ID=cds-IXO1104_RS15175;Parent=gene-IXO1104_RS15175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3311799,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1104_RS15175;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3311815 3312710 . - . ID=gene-IXO1104_RS15180;Name=IXO1104_RS15180;end_range=3312710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15180;old_locus_tag=IXO1104_15150;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3311815 3312710 . - 0 ID=cds-IXO1104_RS15180;Parent=gene-IXO1104_RS15180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3312710,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345585.1;locus_tag=IXO1104_RS15180;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3312690 3313286 . + . ID=gene-IXO1104_RS15185;Name=IXO1104_RS15185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15185;old_locus_tag=IXO1104_15155;partial=true;pseudo=true;start_range=.,3312690 NZ_CP047492.1 Protein Homology CDS 3312690 3313286 . + 0 ID=cds-IXO1104_RS15185;Parent=gene-IXO1104_RS15185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347473.1;locus_tag=IXO1104_RS15185;partial=true;product=transposase;pseudo=true;start_range=.,3312690;transl_table=11 NZ_CP047492.1 RefSeq gene 3313608 3314384 . + . ID=gene-IXO1104_RS15190;Name=IXO1104_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15190;old_locus_tag=IXO1104_15160 NZ_CP047492.1 Protein Homology CDS 3313608 3314384 . + 0 ID=cds-WP_012444508.1;Parent=gene-IXO1104_RS15190;Dbxref=Genbank:WP_012444508.1;Name=WP_012444508.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503432.1;locus_tag=IXO1104_RS15190;product=response regulator;protein_id=WP_012444508.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3314381 3315373 . + . ID=gene-IXO1104_RS15195;Name=IXO1104_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15195;old_locus_tag=IXO1104_15165 NZ_CP047492.1 Protein Homology CDS 3314381 3315373 . + 0 ID=cds-WP_011259588.1;Parent=gene-IXO1104_RS15195;Dbxref=Genbank:WP_011259588.1;Name=WP_011259588.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373388.1;locus_tag=IXO1104_RS15195;product=c-type cytochrome;protein_id=WP_011259588.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3315370 3317829 . + . ID=gene-IXO1104_RS15200;Name=IXO1104_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15200;old_locus_tag=IXO1104_15170 NZ_CP047492.1 Protein Homology CDS 3315370 3317829 . + 0 ID=cds-WP_075240417.1;Parent=gene-IXO1104_RS15200;Dbxref=Genbank:WP_075240417.1;Name=WP_075240417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503434.1;locus_tag=IXO1104_RS15200;product=two-component system VirA-like sensor kinase;protein_id=WP_075240417.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3317943 3318923 . + . ID=gene-IXO1104_RS15205;Name=IXO1104_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15205;old_locus_tag=IXO1104_15175 NZ_CP047492.1 Protein Homology CDS 3317943 3318923 . + 0 ID=cds-WP_011259590.1;Parent=gene-IXO1104_RS15205;Dbxref=Genbank:WP_011259590.1;Name=WP_011259590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259590.1;locus_tag=IXO1104_RS15205;product=LysR family transcriptional regulator;protein_id=WP_011259590.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3318932 3319960 . + . ID=gene-IXO1104_RS15210;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=IXO1104_RS15210;old_locus_tag=IXO1104_15180 NZ_CP047492.1 Protein Homology CDS 3318932 3319960 . + 0 ID=cds-WP_012444505.1;Parent=gene-IXO1104_RS15210;Dbxref=Genbank:WP_012444505.1;Name=WP_012444505.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444505.1;locus_tag=IXO1104_RS15210;product=type VI secretion system protein TssA;protein_id=WP_012444505.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3320021 3320096 . + . ID=gene-IXO1104_RS15215;Name=IXO1104_RS15215;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS15215;old_locus_tag=IXO1104_15185 NZ_CP047492.1 cmsearch ncRNA 3320021 3320096 . + . ID=rna-IXO1104_RS15215;Parent=gene-IXO1104_RS15215;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15215;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3320021 3320096 . + . ID=exon-IXO1104_RS15215-1;Parent=rna-IXO1104_RS15215;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15215;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3320133 3320459 . - . ID=gene-IXO1104_RS15220;Name=IXO1104_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15220;old_locus_tag=IXO1104_15190 NZ_CP047492.1 Protein Homology CDS 3320133 3320459 . - 0 ID=cds-WP_012444504.1;Parent=gene-IXO1104_RS15220;Dbxref=Genbank:WP_012444504.1;Name=WP_012444504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300105.1;locus_tag=IXO1104_RS15220;product=hypothetical protein;protein_id=WP_012444504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3320456 3323359 . - . ID=gene-IXO1104_RS15225;Name=IXO1104_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15225;old_locus_tag=IXO1104_15195 NZ_CP047492.1 Protein Homology CDS 3320456 3323359 . - 0 ID=cds-WP_027703483.1;Parent=gene-IXO1104_RS15225;Dbxref=Genbank:WP_027703483.1;Name=WP_027703483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259592.1;locus_tag=IXO1104_RS15225;product=bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein;protein_id=WP_027703483.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3323356 3324078 . - . ID=gene-IXO1104_RS15230;Name=IXO1104_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15230;old_locus_tag=IXO1104_15200 NZ_CP047492.1 Protein Homology CDS 3323356 3324078 . - 0 ID=cds-WP_011259593.1;Parent=gene-IXO1104_RS15230;Dbxref=Genbank:WP_011259593.1;Name=WP_011259593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347368.1;locus_tag=IXO1104_RS15230;product=serine/threonine-protein phosphatase;protein_id=WP_011259593.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3324075 3324722 . - . ID=gene-IXO1104_RS15235;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=IXO1104_RS15235;old_locus_tag=IXO1104_15205 NZ_CP047492.1 Protein Homology CDS 3324075 3324722 . - 0 ID=cds-WP_041182189.1;Parent=gene-IXO1104_RS15235;Dbxref=Genbank:WP_041182189.1;Name=WP_041182189.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373406.1;locus_tag=IXO1104_RS15235;product=type VI secretion system-associated protein TagF;protein_id=WP_041182189.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3324719 3328177 . - . ID=gene-IXO1104_RS15240;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=IXO1104_RS15240;old_locus_tag=IXO1104_15210 NZ_CP047492.1 Protein Homology CDS 3324719 3328177 . - 0 ID=cds-WP_075240418.1;Parent=gene-IXO1104_RS15240;Dbxref=Genbank:WP_075240418.1;Name=WP_075240418.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113161.1;locus_tag=IXO1104_RS15240;product=type VI secretion system membrane subunit TssM;protein_id=WP_075240418.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3328181 3329497 . - . ID=gene-IXO1104_RS15245;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS15245;old_locus_tag=IXO1104_15215 NZ_CP047492.1 Protein Homology CDS 3328181 3329497 . - 0 ID=cds-WP_075239804.1;Parent=gene-IXO1104_RS15245;Dbxref=Genbank:WP_075239804.1;Name=WP_075239804.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373409.1;locus_tag=IXO1104_RS15245;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_075239804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3329499 3330836 . - . ID=gene-IXO1104_RS15250;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IXO1104_RS15250;old_locus_tag=IXO1104_15220 NZ_CP047492.1 Protein Homology CDS 3329499 3330836 . - 0 ID=cds-WP_027703478.1;Parent=gene-IXO1104_RS15250;Dbxref=Genbank:WP_027703478.1;Name=WP_027703478.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373410.1;locus_tag=IXO1104_RS15250;product=type VI secretion system baseplate subunit TssK;protein_id=WP_027703478.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3330833 3332245 . - . ID=gene-IXO1104_RS15255;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=IXO1104_RS15255;old_locus_tag=IXO1104_15225 NZ_CP047492.1 Protein Homology CDS 3330833 3332245 . - 0 ID=cds-WP_012444498.1;Parent=gene-IXO1104_RS15255;Dbxref=Genbank:WP_012444498.1;Name=WP_012444498.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113159.1;locus_tag=IXO1104_RS15255;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_012444498.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3332242 3332781 . - . ID=gene-IXO1104_RS15260;Name=IXO1104_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15260;old_locus_tag=IXO1104_15230 NZ_CP047492.1 Protein Homology CDS 3332242 3332781 . - 0 ID=cds-WP_011408951.1;Parent=gene-IXO1104_RS15260;Dbxref=Genbank:WP_011408951.1;Name=WP_011408951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373413.1;locus_tag=IXO1104_RS15260;product=hypothetical protein;protein_id=WP_011408951.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3332790 3334727 . - . ID=gene-IXO1104_RS15265;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=IXO1104_RS15265;old_locus_tag=IXO1104_15235 NZ_CP047492.1 Protein Homology CDS 3332790 3334727 . - 0 ID=cds-WP_012444497.1;Parent=gene-IXO1104_RS15265;Dbxref=Genbank:WP_012444497.1;Name=WP_012444497.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=vgrG;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378659.1;locus_tag=IXO1104_RS15265;product=type VI secretion system tip protein VgrG;protein_id=WP_012444497.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3334992 3335450 . - . ID=gene-IXO1104_RS15270;Name=IXO1104_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15270;old_locus_tag=IXO1104_15240 NZ_CP047492.1 Protein Homology CDS 3334992 3335450 . - 0 ID=cds-WP_011408952.1;Parent=gene-IXO1104_RS15270;Dbxref=Genbank:WP_011408952.1;Name=WP_011408952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118730.1;locus_tag=IXO1104_RS15270;product=hypothetical protein;protein_id=WP_011408952.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3335591 3335776 . - . ID=gene-IXO1104_RS15275;Name=IXO1104_RS15275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15275;old_locus_tag=IXO1104_15245;partial=true;pseudo=true;start_range=.,3335591 NZ_CP047492.1 Protein Homology CDS 3335591 3335776 . - 0 ID=cds-IXO1104_RS15275;Parent=gene-IXO1104_RS15275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS15275;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3335591;transl_table=11 NZ_CP047492.1 RefSeq gene 3335837 3336331 . - . ID=gene-IXO1104_RS15280;Name=IXO1104_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15280;old_locus_tag=IXO1104_15250 NZ_CP047492.1 GeneMarkS-2+ CDS 3335837 3336331 . - 0 ID=cds-WP_125168760.1;Parent=gene-IXO1104_RS15280;Dbxref=Genbank:WP_125168760.1;Name=WP_125168760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15280;product=hypothetical protein;protein_id=WP_125168760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3336397 3336894 . - . ID=gene-IXO1104_RS15285;Name=IXO1104_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15285;old_locus_tag=IXO1104_15255 NZ_CP047492.1 Protein Homology CDS 3336397 3336894 . - 0 ID=cds-WP_027703476.1;Parent=gene-IXO1104_RS15285;Dbxref=Genbank:WP_027703476.1;Name=WP_027703476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159434.1;locus_tag=IXO1104_RS15285;product=hypothetical protein;protein_id=WP_027703476.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3337083 3339788 . - . ID=gene-IXO1104_RS15290;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=IXO1104_RS15290;old_locus_tag=IXO1104_15260 NZ_CP047492.1 Protein Homology CDS 3337083 3339788 . - 0 ID=cds-WP_075240419.1;Parent=gene-IXO1104_RS15290;Dbxref=Genbank:WP_075240419.1;Name=WP_075240419.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159435.1;locus_tag=IXO1104_RS15290;product=type VI secretion system ATPase TssH;protein_id=WP_075240419.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3339821 3340831 . - . ID=gene-IXO1104_RS15295;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=IXO1104_RS15295;old_locus_tag=IXO1104_15265 NZ_CP047492.1 Protein Homology CDS 3339821 3340831 . - 0 ID=cds-WP_027703474.1;Parent=gene-IXO1104_RS15295;Dbxref=Genbank:WP_027703474.1;Name=WP_027703474.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113157.1;locus_tag=IXO1104_RS15295;product=type VI secretion system baseplate subunit TssG;protein_id=WP_027703474.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3340795 3342672 . - . ID=gene-IXO1104_RS15300;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=IXO1104_RS15300;old_locus_tag=IXO1104_15270 NZ_CP047492.1 Protein Homology CDS 3340795 3342672 . - 0 ID=cds-WP_075238996.1;Parent=gene-IXO1104_RS15300;Dbxref=Genbank:WP_075238996.1;Name=WP_075238996.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571950.1;locus_tag=IXO1104_RS15300;product=type VI secretion system baseplate subunit TssF;protein_id=WP_075238996.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3342676 3343179 . - . ID=gene-IXO1104_RS15305;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=IXO1104_RS15305;old_locus_tag=IXO1104_15275 NZ_CP047492.1 Protein Homology CDS 3342676 3343179 . - 0 ID=cds-WP_011259603.1;Parent=gene-IXO1104_RS15305;Dbxref=Genbank:WP_011259603.1;Name=WP_011259603.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300091.1;locus_tag=IXO1104_RS15305;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011259603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3343167 3344000 . - . ID=gene-IXO1104_RS15310;Name=IXO1104_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15310;old_locus_tag=IXO1104_15280 NZ_CP047492.1 Protein Homology CDS 3343167 3344000 . - 0 ID=cds-WP_011259604.1;Parent=gene-IXO1104_RS15310;Dbxref=Genbank:WP_011259604.1;Name=WP_011259604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373429.1;locus_tag=IXO1104_RS15310;product=hypothetical protein;protein_id=WP_011259604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3344036 3344539 . - . ID=gene-IXO1104_RS15315;Name=IXO1104_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15315;old_locus_tag=IXO1104_15285 NZ_CP047492.1 Protein Homology CDS 3344036 3344539 . - 0 ID=cds-WP_075238994.1;Parent=gene-IXO1104_RS15315;Dbxref=Genbank:WP_075238994.1;Name=WP_075238994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572542.1;locus_tag=IXO1104_RS15315;product=type VI secretion system tube protein Hcp;protein_id=WP_075238994.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3344639 3346153 . - . ID=gene-IXO1104_RS15320;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=IXO1104_RS15320;old_locus_tag=IXO1104_15290 NZ_CP047492.1 Protein Homology CDS 3344639 3346153 . - 0 ID=cds-WP_044756705.1;Parent=gene-IXO1104_RS15320;Dbxref=Genbank:WP_044756705.1;Name=WP_044756705.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300089.1;locus_tag=IXO1104_RS15320;product=type VI secretion system contractile sheath large subunit;protein_id=WP_044756705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3346146 3346652 . - . ID=gene-IXO1104_RS15325;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=IXO1104_RS15325;old_locus_tag=IXO1104_15295 NZ_CP047492.1 Protein Homology CDS 3346146 3346652 . - 0 ID=cds-WP_024711387.1;Parent=gene-IXO1104_RS15325;Dbxref=Genbank:WP_024711387.1;Name=WP_024711387.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467682.1;locus_tag=IXO1104_RS15325;product=type VI secretion system contractile sheath small subunit;protein_id=WP_024711387.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3347146 3347289 . - . ID=gene-IXO1104_RS15330;Name=IXO1104_RS15330;end_range=3347289,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15330;old_locus_tag=IXO1104_15300;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3347146 3347289 . - 0 ID=cds-IXO1104_RS15330;Parent=gene-IXO1104_RS15330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3347289,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611206.1;locus_tag=IXO1104_RS15330;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3348011 3348979 . - . ID=gene-IXO1104_RS15335;Name=IXO1104_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15335;old_locus_tag=IXO1104_15310 NZ_CP047492.1 Protein Homology CDS 3348011 3348979 . - 0 ID=cds-WP_011258529.1-7;Parent=gene-IXO1104_RS15335;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS15335;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3349128 3350363 . + . ID=gene-IXO1104_RS15340;Name=IXO1104_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15340;old_locus_tag=IXO1104_15315 NZ_CP047492.1 Protein Homology CDS 3349128 3350363 . + 0 ID=cds-WP_044756703.1;Parent=gene-IXO1104_RS15340;Dbxref=Genbank:WP_044756703.1;Name=WP_044756703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS15340;product=ISL3 family transposase;protein_id=WP_044756703.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3350367 3352325 . - . ID=gene-IXO1104_RS15345;Name=IXO1104_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15345;old_locus_tag=IXO1104_15320 NZ_CP047492.1 Protein Homology CDS 3350367 3352325 . - 0 ID=cds-WP_154741207.1;Parent=gene-IXO1104_RS15345;Dbxref=Genbank:WP_154741207.1;Name=WP_154741207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444485.1;locus_tag=IXO1104_RS15345;product=hypothetical protein;protein_id=WP_154741207.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3352443 3353399 . + . ID=gene-IXO1104_RS15350;Name=IXO1104_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15350;old_locus_tag=IXO1104_15325 NZ_CP047492.1 Protein Homology CDS 3352443 3353399 . + 0 ID=cds-WP_011407237.1-10;Parent=gene-IXO1104_RS15350;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS15350;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3353374 3354153 . - . ID=gene-IXO1104_RS15355;Name=IXO1104_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15355;old_locus_tag=IXO1104_15330 NZ_CP047492.1 Protein Homology CDS 3353374 3354153 . - 0 ID=cds-WP_241846806.1;Parent=gene-IXO1104_RS15355;Dbxref=Genbank:WP_241846806.1;Name=WP_241846806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807738.1;locus_tag=IXO1104_RS15355;product=hypothetical protein;protein_id=WP_241846806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3354176 3354430 . - . ID=gene-IXO1104_RS15360;Name=IXO1104_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15360;old_locus_tag=IXO1104_15335 NZ_CP047492.1 GeneMarkS-2+ CDS 3354176 3354430 . - 0 ID=cds-WP_241846807.1;Parent=gene-IXO1104_RS15360;Dbxref=Genbank:WP_241846807.1;Name=WP_241846807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15360;product=hypothetical protein;protein_id=WP_241846807.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3354504 3355472 . + . ID=gene-IXO1104_RS15365;Name=IXO1104_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15365;old_locus_tag=IXO1104_15340 NZ_CP047492.1 Protein Homology CDS 3354504 3355472 . + 0 ID=cds-WP_011258802.1-10;Parent=gene-IXO1104_RS15365;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS15365;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3355725 3356693 . + . ID=gene-IXO1104_RS15370;Name=IXO1104_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15370;old_locus_tag=IXO1104_15345 NZ_CP047492.1 Protein Homology CDS 3355725 3356693 . + 0 ID=cds-WP_011258529.1-8;Parent=gene-IXO1104_RS15370;Dbxref=Genbank:WP_011258529.1;Name=WP_011258529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS15370;product=IS5 family transposase;protein_id=WP_011258529.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3356808 3359330 . - . ID=gene-IXO1104_RS15375;Name=IXO1104_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15375;old_locus_tag=IXO1104_15350 NZ_CP047492.1 Protein Homology CDS 3356808 3359330 . - 0 ID=cds-WP_241846808.1;Parent=gene-IXO1104_RS15375;Dbxref=Genbank:WP_241846808.1;Name=WP_241846808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445479.1;locus_tag=IXO1104_RS15375;product=hypothetical protein;protein_id=WP_241846808.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3359327 3359506 . - . ID=gene-IXO1104_RS15380;Name=IXO1104_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15380;old_locus_tag=IXO1104_15355 NZ_CP047492.1 GeneMarkS-2+ CDS 3359327 3359506 . - 0 ID=cds-WP_075240368.1;Parent=gene-IXO1104_RS15380;Dbxref=Genbank:WP_075240368.1;Name=WP_075240368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15380;product=hypothetical protein;protein_id=WP_075240368.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3359568 3359822 . - . ID=gene-IXO1104_RS15385;Name=IXO1104_RS15385;end_range=3359822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15385;old_locus_tag=IXO1104_15360;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3359568 3359822 . - 0 ID=cds-IXO1104_RS15385;Parent=gene-IXO1104_RS15385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3359822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=IXO1104_RS15385;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3359988 3361817 . - . ID=gene-IXO1104_RS15390;Name=IXO1104_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15390;old_locus_tag=IXO1104_15365 NZ_CP047492.1 Protein Homology CDS 3359988 3361817 . - 0 ID=cds-WP_075240126.1;Parent=gene-IXO1104_RS15390;Dbxref=Genbank:WP_075240126.1;Name=WP_075240126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445380.1;locus_tag=IXO1104_RS15390;product=transmembrane repetitive protein;protein_id=WP_075240126.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3361831 3362430 . - . ID=gene-IXO1104_RS15395;Name=IXO1104_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15395;old_locus_tag=IXO1104_15370 NZ_CP047492.1 Protein Homology CDS 3361831 3362430 . - 0 ID=cds-WP_012445381.1;Parent=gene-IXO1104_RS15395;Dbxref=Genbank:WP_012445381.1;Name=WP_012445381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410314.1;locus_tag=IXO1104_RS15395;product=NfuA family Fe-S biogenesis protein;protein_id=WP_012445381.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3362518 3362874 . + . ID=gene-IXO1104_RS15400;Name=IXO1104_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15400;old_locus_tag=IXO1104_15375 NZ_CP047492.1 Protein Homology CDS 3362518 3362874 . + 0 ID=cds-WP_012445382.1;Parent=gene-IXO1104_RS15400;Dbxref=Genbank:WP_012445382.1;Name=WP_012445382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445382.1;locus_tag=IXO1104_RS15400;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_012445382.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3362871 3363293 . + . ID=gene-IXO1104_RS15405;Name=IXO1104_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15405;old_locus_tag=IXO1104_15380 NZ_CP047492.1 Protein Homology CDS 3362871 3363293 . + 0 ID=cds-WP_012445383.1;Parent=gene-IXO1104_RS15405;Dbxref=Genbank:WP_012445383.1;Name=WP_012445383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259617.1;locus_tag=IXO1104_RS15405;product=energy transducer TonB;protein_id=WP_012445383.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3363351 3363829 . + . ID=gene-IXO1104_RS15410;Name=IXO1104_RS15410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15410;partial=true;pseudo=true;start_range=.,3363351 NZ_CP047492.1 Protein Homology CDS 3363351 3363829 . + 0 ID=cds-IXO1104_RS15410;Parent=gene-IXO1104_RS15410;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575667.1;locus_tag=IXO1104_RS15410;partial=true;product=ZIP family metal transporter;pseudo=true;start_range=.,3363351;transl_table=11 NZ_CP047492.1 RefSeq gene 3364145 3365962 . + . ID=gene-IXO1104_RS15415;Name=IXO1104_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15415;old_locus_tag=IXO1104_15395 NZ_CP047492.1 Protein Homology CDS 3364145 3365962 . + 0 ID=cds-WP_171970841.1;Parent=gene-IXO1104_RS15415;Dbxref=Genbank:WP_171970841.1;Name=WP_171970841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259618.1;locus_tag=IXO1104_RS15415;product=DUF3300 domain-containing protein;protein_id=WP_171970841.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3365995 3366981 . - . ID=gene-IXO1104_RS15420;Name=IXO1104_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15420;old_locus_tag=IXO1104_15400 NZ_CP047492.1 Protein Homology CDS 3365995 3366981 . - 0 ID=cds-WP_027704269.1;Parent=gene-IXO1104_RS15420;Dbxref=Genbank:WP_027704269.1;Name=WP_027704269.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303869.1;locus_tag=IXO1104_RS15420;product=RluA family pseudouridine synthase;protein_id=WP_027704269.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3367383 3371105 . + . ID=gene-IXO1104_RS15425;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=IXO1104_RS15425;old_locus_tag=IXO1104_15405 NZ_CP047492.1 Protein Homology CDS 3367383 3371105 . + 0 ID=cds-WP_011408969.1;Parent=gene-IXO1104_RS15425;Dbxref=Genbank:WP_011408969.1;Name=WP_011408969.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445388.1;locus_tag=IXO1104_RS15425;product=ribonuclease E;protein_id=WP_011408969.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3371631 3372394 . - . ID=gene-IXO1104_RS15430;Name=IXO1104_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15430;old_locus_tag=IXO1104_15410 NZ_CP047492.1 Protein Homology CDS 3372079 3372394 . - 0 ID=cds-WP_094187765.1;Parent=gene-IXO1104_RS15430;Dbxref=Genbank:WP_094187765.1;Name=WP_094187765.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS15430;product=IS5 family transposase;protein_id=WP_094187765.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3371631 3372079 . - 2 ID=cds-WP_094187765.1;Parent=gene-IXO1104_RS15430;Dbxref=Genbank:WP_094187765.1;Name=WP_094187765.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS15430;product=IS5 family transposase;protein_id=WP_094187765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3372498 3373145 . - . ID=gene-IXO1104_RS15435;Name=IXO1104_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15435;old_locus_tag=IXO1104_15415 NZ_CP047492.1 Protein Homology CDS 3372498 3373145 . - 0 ID=cds-WP_012445389.1;Parent=gene-IXO1104_RS15435;Dbxref=Genbank:WP_012445389.1;Name=WP_012445389.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408972.1;locus_tag=IXO1104_RS15435;product=response regulator;protein_id=WP_012445389.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3373367 3374128 . - . ID=gene-IXO1104_RS15440;Name=IXO1104_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15440;old_locus_tag=IXO1104_15420 NZ_CP047492.1 Protein Homology CDS 3373367 3374128 . - 0 ID=cds-WP_011408973.1;Parent=gene-IXO1104_RS15440;Dbxref=Genbank:WP_011408973.1;Name=WP_011408973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373348.1;locus_tag=IXO1104_RS15440;product=sulfurtransferase;protein_id=WP_011408973.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3374228 3374593 . - . ID=gene-IXO1104_RS15445;Name=IXO1104_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15445;old_locus_tag=IXO1104_15425 NZ_CP047492.1 Protein Homology CDS 3374228 3374593 . - 0 ID=cds-WP_011408974.1;Parent=gene-IXO1104_RS15445;Dbxref=Genbank:WP_011408974.1;Name=WP_011408974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301518.1;locus_tag=IXO1104_RS15445;product=DUF6164 family protein;protein_id=WP_011408974.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3374652 3375083 . + . ID=gene-IXO1104_RS15450;Name=IXO1104_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15450;old_locus_tag=IXO1104_15430 NZ_CP047492.1 Protein Homology CDS 3374652 3375083 . + 0 ID=cds-WP_011408975.1;Parent=gene-IXO1104_RS15450;Dbxref=Genbank:WP_011408975.1;Name=WP_011408975.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156625.1;locus_tag=IXO1104_RS15450;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011408975.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3375095 3376357 . + . ID=gene-IXO1104_RS15455;Name=IXO1104_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15455;old_locus_tag=IXO1104_15435 NZ_CP047492.1 Protein Homology CDS 3375095 3376357 . + 0 ID=cds-WP_011259625.1;Parent=gene-IXO1104_RS15455;Dbxref=Genbank:WP_011259625.1;Name=WP_011259625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378776.1;locus_tag=IXO1104_RS15455;product=TIGR03862 family flavoprotein;protein_id=WP_011259625.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3376341 3377633 . - . ID=gene-IXO1104_RS15460;Name=IXO1104_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15460;old_locus_tag=IXO1104_15440 NZ_CP047492.1 Protein Homology CDS 3376341 3377633 . - 0 ID=cds-WP_011259626.1;Parent=gene-IXO1104_RS15460;Dbxref=Genbank:WP_011259626.1;Name=WP_011259626.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503478.1;locus_tag=IXO1104_RS15460;product=nucleotide sugar dehydrogenase;protein_id=WP_011259626.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3377775 3377858 . + . ID=gene-IXO1104_RS15465;Name=IXO1104_RS15465;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS15465;old_locus_tag=IXO1104_15445 NZ_CP047492.1 tRNAscan-SE tRNA 3377775 3377858 . + . ID=rna-IXO1104_RS15465;Parent=gene-IXO1104_RS15465;anticodon=(pos:3377809..3377811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15465;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 3377775 3377858 . + . ID=exon-IXO1104_RS15465-1;Parent=rna-IXO1104_RS15465;anticodon=(pos:3377809..3377811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15465;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 3378120 3378773 . + . ID=gene-IXO1104_RS15470;Name=IXO1104_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15470;old_locus_tag=IXO1104_15450 NZ_CP047492.1 Protein Homology CDS 3378120 3378773 . + 0 ID=cds-WP_178380569.1;Parent=gene-IXO1104_RS15470;Dbxref=Genbank:WP_178380569.1;Name=WP_178380569.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408977.1;locus_tag=IXO1104_RS15470;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_178380569.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3379185 3379520 . + . ID=gene-IXO1104_RS15475;Name=IXO1104_RS15475;end_range=3379520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15475;old_locus_tag=IXO1104_15455;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3379185 3379520 . + 0 ID=cds-IXO1104_RS15475;Parent=gene-IXO1104_RS15475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3379520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS15475;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3379530 3380765 . - . ID=gene-IXO1104_RS15480;Name=IXO1104_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15480;old_locus_tag=IXO1104_15460 NZ_CP047492.1 Protein Homology CDS 3379530 3380765 . - 0 ID=cds-WP_133264723.1;Parent=gene-IXO1104_RS15480;Dbxref=Genbank:WP_133264723.1;Name=WP_133264723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS15480;product=ISL3 family transposase;protein_id=WP_133264723.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3380829 3381824 . + . ID=gene-IXO1104_RS15485;Name=IXO1104_RS15485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15485;old_locus_tag=IXO1104_15465;partial=true;pseudo=true;start_range=.,3380829 NZ_CP047492.1 Protein Homology CDS 3380829 3381824 . + 0 ID=cds-IXO1104_RS15485;Parent=gene-IXO1104_RS15485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS15485;partial=true;product=IS701-like element ISXo15 family transposase;pseudo=true;start_range=.,3380829;transl_table=11 NZ_CP047492.1 RefSeq gene 3382064 3382321 . - . ID=gene-IXO1104_RS15490;Name=IXO1104_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15490;old_locus_tag=IXO1104_15470 NZ_CP047492.1 Protein Homology CDS 3382064 3382321 . - 0 ID=cds-WP_011408979.1;Parent=gene-IXO1104_RS15490;Dbxref=Genbank:WP_011408979.1;Name=WP_011408979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812907.1;locus_tag=IXO1104_RS15490;product=stress-induced protein;protein_id=WP_011408979.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3382761 3383744 . + . ID=gene-IXO1104_RS15495;Name=IXO1104_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15495;old_locus_tag=IXO1104_15475 NZ_CP047492.1 Protein Homology CDS 3382761 3383744 . + 0 ID=cds-WP_011408980.1;Parent=gene-IXO1104_RS15495;Dbxref=Genbank:WP_011408980.1;Name=WP_011408980.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS15495;product=IS5 family transposase;protein_id=WP_011408980.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3383997 3384959 . + . ID=gene-IXO1104_RS15500;Name=IXO1104_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15500;old_locus_tag=IXO1104_15480 NZ_CP047492.1 Protein Homology CDS 3383997 3384959 . + 0 ID=cds-WP_044756692.1;Parent=gene-IXO1104_RS15500;Dbxref=Genbank:WP_044756692.1;Name=WP_044756692.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS15500;product=IS1595 family transposase;protein_id=WP_044756692.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3385222 3385662 . - . ID=gene-IXO1104_RS15505;Name=IXO1104_RS15505;end_range=3385662,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15505;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3385222 3385662 . - 0 ID=cds-IXO1104_RS15505;Parent=gene-IXO1104_RS15505;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3385662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169078.1;locus_tag=IXO1104_RS15505;partial=true;product=nitrate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3385943 3386908 . - . ID=gene-IXO1104_RS15510;Name=IXO1104_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15510;old_locus_tag=IXO1104_15495 NZ_CP047492.1 Protein Homology CDS 3385943 3386908 . - 0 ID=cds-WP_041182196.1;Parent=gene-IXO1104_RS15510;Dbxref=Genbank:WP_041182196.1;Name=WP_041182196.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS15510;product=IS1595 family transposase;protein_id=WP_041182196.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3386997 3387388 . - . ID=gene-IXO1104_RS15515;Name=IXO1104_RS15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15515;old_locus_tag=IXO1104_15500;partial=true;pseudo=true;start_range=.,3386997 NZ_CP047492.1 Protein Homology CDS 3386997 3387388 . - 0 ID=cds-IXO1104_RS15515;Parent=gene-IXO1104_RS15515;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009596539.1;locus_tag=IXO1104_RS15515;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,3386997;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3387474 3388031 . - . ID=gene-IXO1104_RS15520;Name=IXO1104_RS15520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15520;old_locus_tag=IXO1104_15505;pseudo=true NZ_CP047492.1 Protein Homology CDS 3387474 3388031 . - 0 ID=cds-IXO1104_RS15520;Parent=gene-IXO1104_RS15520;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575394.1;locus_tag=IXO1104_RS15520;product=ANTAR domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3388116 3389093 . + . ID=gene-IXO1104_RS15525;Name=IXO1104_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15525;old_locus_tag=IXO1104_15510 NZ_CP047492.1 Protein Homology CDS 3388116 3389093 . + 0 ID=cds-WP_011259636.1;Parent=gene-IXO1104_RS15525;Dbxref=Genbank:WP_011259636.1;Name=WP_011259636.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503383.1;locus_tag=IXO1104_RS15525;product=SAM-dependent methyltransferase;protein_id=WP_011259636.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3389432 3389902 . + . ID=gene-IXO1104_RS15530;Name=IXO1104_RS15530;end_range=3389902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15530;old_locus_tag=IXO1104_15515;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3389432 3389902 . + 0 ID=cds-IXO1104_RS15530;Parent=gene-IXO1104_RS15530;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3389902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160123.1;locus_tag=IXO1104_RS15530;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3389878 3390096 . + . ID=gene-IXO1104_RS15535;Name=IXO1104_RS15535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15535;old_locus_tag=IXO1104_15520;partial=true;pseudo=true;start_range=.,3389878 NZ_CP047492.1 Protein Homology CDS 3389878 3390096 . + 0 ID=cds-IXO1104_RS15535;Parent=gene-IXO1104_RS15535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575387.1;locus_tag=IXO1104_RS15535;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3389878;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3390184 3391256 . - . ID=gene-IXO1104_RS15540;Name=IXO1104_RS15540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15540;old_locus_tag=IXO1104_15525;pseudo=true NZ_CP047492.1 Protein Homology CDS 3390184 3391256 . - 0 ID=cds-IXO1104_RS15540;Parent=gene-IXO1104_RS15540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158288.1;locus_tag=IXO1104_RS15540;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3391490 3391852 . - . ID=gene-IXO1104_RS15545;Name=IXO1104_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15545;old_locus_tag=IXO1104_15530 NZ_CP047492.1 Protein Homology CDS 3391490 3391852 . - 0 ID=cds-WP_011408987.1;Parent=gene-IXO1104_RS15545;Dbxref=Genbank:WP_011408987.1;Name=WP_011408987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158289.1;locus_tag=IXO1104_RS15545;product=hypothetical protein;protein_id=WP_011408987.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3391836 3392405 . - . ID=gene-IXO1104_RS15550;Name=IXO1104_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15550;old_locus_tag=IXO1104_15535 NZ_CP047492.1 Protein Homology CDS 3391836 3392405 . - 0 ID=cds-WP_011408988.1;Parent=gene-IXO1104_RS15550;Dbxref=Genbank:WP_011408988.1;Name=WP_011408988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575382.1;locus_tag=IXO1104_RS15550;product=molybdenum cofactor guanylyltransferase;protein_id=WP_011408988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3392443 3393717 . - . ID=gene-IXO1104_RS15555;Name=IXO1104_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15555;old_locus_tag=IXO1104_15540 NZ_CP047492.1 Protein Homology CDS 3392443 3393717 . - 0 ID=cds-WP_171970808.1;Parent=gene-IXO1104_RS15555;Dbxref=Genbank:WP_171970808.1;Name=WP_171970808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160124.1;locus_tag=IXO1104_RS15555;product=molybdopterin molybdotransferase MoeA;protein_id=WP_171970808.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3393902 3394174 . + . ID=gene-IXO1104_RS15560;Name=IXO1104_RS15560;end_range=3394174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15560;old_locus_tag=IXO1104_15545;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3393902 3394174 . + 0 ID=cds-IXO1104_RS15560;Parent=gene-IXO1104_RS15560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3394174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158292.1;locus_tag=IXO1104_RS15560;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3394218 3394601 . - . ID=gene-IXO1104_RS15565;Name=IXO1104_RS15565;end_range=3394601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15565;old_locus_tag=IXO1104_15550;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3394218 3394601 . - 0 ID=cds-IXO1104_RS15565;Parent=gene-IXO1104_RS15565;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3394601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970070.1;locus_tag=IXO1104_RS15565;partial=true;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3394837 3395595 . + . ID=gene-IXO1104_RS15570;Name=IXO1104_RS15570;end_range=3395595,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15570;old_locus_tag=IXO1104_15555;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3394837 3395595 . + 0 ID=cds-IXO1104_RS15570;Parent=gene-IXO1104_RS15570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3395595,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS15570;partial=true;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3395659 3396627 . + . ID=gene-IXO1104_RS15575;Name=IXO1104_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15575;old_locus_tag=IXO1104_15560 NZ_CP047492.1 Protein Homology CDS 3395659 3396627 . + 0 ID=cds-WP_011258802.1-11;Parent=gene-IXO1104_RS15575;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS15575;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3396840 3397415 . - . ID=gene-IXO1104_RS15580;Name=IXO1104_RS15580;end_range=3397415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15580;old_locus_tag=IXO1104_15565;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3396840 3397415 . - 0 ID=cds-IXO1104_RS15580;Parent=gene-IXO1104_RS15580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3397415,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS15580;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3397459 3398257 . + . ID=gene-IXO1104_RS15585;Name=IXO1104_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15585;old_locus_tag=IXO1104_15570 NZ_CP047492.1 Protein Homology CDS 3397459 3397730 . + 0 ID=cds-WP_133265483.1;Parent=gene-IXO1104_RS15585;Dbxref=Genbank:WP_133265483.1;Name=WP_133265483.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS15585;product=IS5 family transposase;protein_id=WP_133265483.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3397729 3398257 . + 1 ID=cds-WP_133265483.1;Parent=gene-IXO1104_RS15585;Dbxref=Genbank:WP_133265483.1;Name=WP_133265483.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS15585;product=IS5 family transposase;protein_id=WP_133265483.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3398372 3400747 . - . ID=gene-IXO1104_RS15590;Name=IXO1104_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15590;old_locus_tag=IXO1104_15575 NZ_CP047492.1 Protein Homology CDS 3398372 3400747 . - 0 ID=cds-WP_027704011.1;Parent=gene-IXO1104_RS15590;Dbxref=Genbank:WP_027704011.1;Name=WP_027704011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302217.1;locus_tag=IXO1104_RS15590;product=glycoside hydrolase family 127 protein;protein_id=WP_027704011.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3400895 3402873 . - . ID=gene-IXO1104_RS15595;Name=IXO1104_RS15595;end_range=3402873,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15595;old_locus_tag=IXO1104_15580;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3400895 3402873 . - 0 ID=cds-IXO1104_RS15595;Parent=gene-IXO1104_RS15595;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3402873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=IXO1104_RS15595;partial=true;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3402958 3404142 . + . ID=gene-IXO1104_RS15600;Name=IXO1104_RS15600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15600;old_locus_tag=IXO1104_15585;pseudo=true NZ_CP047492.1 Protein Homology CDS 3402958 3404142 . + 0 ID=cds-IXO1104_RS15600;Parent=gene-IXO1104_RS15600;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1104_RS15600;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3404176 3405099 . - . ID=gene-IXO1104_RS15605;Name=IXO1104_RS15605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15605;old_locus_tag=IXO1104_15590;partial=true;pseudo=true;start_range=.,3404176 NZ_CP047492.1 Protein Homology CDS 3404176 3405099 . - 0 ID=cds-IXO1104_RS15605;Parent=gene-IXO1104_RS15605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=IXO1104_RS15605;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;start_range=.,3404176;transl_table=11 NZ_CP047492.1 RefSeq gene 3405596 3407941 . - . ID=gene-IXO1104_RS15610;Name=IXO1104_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15610;old_locus_tag=IXO1104_15595 NZ_CP047492.1 Protein Homology CDS 3405596 3407941 . - 0 ID=cds-WP_011259647.1;Parent=gene-IXO1104_RS15610;Dbxref=Genbank:WP_011259647.1;Name=WP_011259647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259647.1;locus_tag=IXO1104_RS15610;product=S9 family peptidase;protein_id=WP_011259647.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3408263 3409849 . - . ID=gene-IXO1104_RS15615;Name=IXO1104_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15615;old_locus_tag=IXO1104_15600 NZ_CP047492.1 Protein Homology CDS 3408263 3409849 . - 0 ID=cds-WP_033013184.1;Parent=gene-IXO1104_RS15615;Dbxref=Genbank:WP_033013184.1;Name=WP_033013184.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920354.1;locus_tag=IXO1104_RS15615;product=family 43 glycosylhydrolase;protein_id=WP_033013184.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3409846 3414210 . - . ID=gene-IXO1104_RS15620;Name=IXO1104_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15620;old_locus_tag=IXO1104_15605 NZ_CP047492.1 Protein Homology CDS 3409846 3414210 . - 0 ID=cds-WP_011409002.1;Parent=gene-IXO1104_RS15620;Dbxref=Genbank:WP_011409002.1;Name=WP_011409002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154735.1;locus_tag=IXO1104_RS15620;product=Ig-like domain-containing protein;protein_id=WP_011409002.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3414449 3417265 . - . ID=gene-IXO1104_RS15625;Name=IXO1104_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15625;old_locus_tag=IXO1104_15610 NZ_CP047492.1 Protein Homology CDS 3414449 3417265 . - 0 ID=cds-WP_041182199.1;Parent=gene-IXO1104_RS15625;Dbxref=Genbank:WP_041182199.1;Name=WP_041182199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051657.1;locus_tag=IXO1104_RS15625;product=TonB-dependent receptor;protein_id=WP_041182199.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3417787 3420144 . - . ID=gene-IXO1104_RS15630;Name=IXO1104_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15630;old_locus_tag=IXO1104_15615 NZ_CP047492.1 Protein Homology CDS 3417787 3420144 . - 0 ID=cds-WP_075240610.1;Parent=gene-IXO1104_RS15630;Dbxref=Genbank:WP_075240610.1;Name=WP_075240610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167589.1;locus_tag=IXO1104_RS15630;product=Tat pathway signal protein;protein_id=WP_075240610.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3420608 3422179 . + . ID=gene-IXO1104_RS15635;Name=IXO1104_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15635;old_locus_tag=IXO1104_15620 NZ_CP047492.1 Protein Homology CDS 3420608 3422179 . + 0 ID=cds-WP_075240609.1;Parent=gene-IXO1104_RS15635;Dbxref=Genbank:WP_075240609.1;Name=WP_075240609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171569.1;locus_tag=IXO1104_RS15635;product=S53 family peptidase;protein_id=WP_075240609.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3422387 3422683 . - . ID=gene-IXO1104_RS15640;Name=IXO1104_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15640;old_locus_tag=IXO1104_15625 NZ_CP047492.1 Protein Homology CDS 3422387 3422683 . - 0 ID=cds-WP_014502903.1;Parent=gene-IXO1104_RS15640;Dbxref=Genbank:WP_014502903.1;Name=WP_014502903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378174.1;locus_tag=IXO1104_RS15640;product=hypothetical protein;protein_id=WP_014502903.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3422680 3424409 . - . ID=gene-IXO1104_RS15645;Name=IXO1104_RS15645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15645;old_locus_tag=IXO1104_15630;pseudo=true NZ_CP047492.1 Protein Homology CDS 3422680 3424409 . - 0 ID=cds-IXO1104_RS15645;Parent=gene-IXO1104_RS15645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472147.1;locus_tag=IXO1104_RS15645;product=DUF5597 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3424409 3426748 . - . ID=gene-IXO1104_RS15650;Name=IXO1104_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15650;old_locus_tag=IXO1104_15635 NZ_CP047492.1 Protein Homology CDS 3424409 3426748 . - 0 ID=cds-WP_075240606.1;Parent=gene-IXO1104_RS15650;Dbxref=Genbank:WP_075240606.1;Name=WP_075240606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154742.1;locus_tag=IXO1104_RS15650;product=S9 family peptidase;protein_id=WP_075240606.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3426738 3428324 . - . ID=gene-IXO1104_RS15655;Name=IXO1104_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15655;old_locus_tag=IXO1104_15640 NZ_CP047492.1 Protein Homology CDS 3426738 3428324 . - 0 ID=cds-WP_012445432.1;Parent=gene-IXO1104_RS15655;Dbxref=Genbank:WP_012445432.1;Name=WP_012445432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484927.1;locus_tag=IXO1104_RS15655;product=APC family permease;protein_id=WP_012445432.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3428387 3430252 . - . ID=gene-IXO1104_RS15660;Name=IXO1104_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15660;old_locus_tag=IXO1104_15645 NZ_CP047492.1 Protein Homology CDS 3428387 3430252 . - 0 ID=cds-WP_075240605.1;Parent=gene-IXO1104_RS15660;Dbxref=Genbank:WP_075240605.1;Name=WP_075240605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914076.1;locus_tag=IXO1104_RS15660;product=DUF885 family protein;protein_id=WP_075240605.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3430249 3432081 . - . ID=gene-IXO1104_RS15665;Name=IXO1104_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15665;old_locus_tag=IXO1104_15650 NZ_CP047492.1 Protein Homology CDS 3430249 3432081 . - 0 ID=cds-WP_075240604.1;Parent=gene-IXO1104_RS15665;Dbxref=Genbank:WP_075240604.1;Name=WP_075240604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159284.1;locus_tag=IXO1104_RS15665;product=DUF885 family protein;protein_id=WP_075240604.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3432201 3433400 . - . ID=gene-IXO1104_RS15670;Name=IXO1104_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15670;old_locus_tag=IXO1104_15655 NZ_CP047492.1 Protein Homology CDS 3432201 3433400 . - 0 ID=cds-WP_075240603.1;Parent=gene-IXO1104_RS15670;Dbxref=Genbank:WP_075240603.1;Name=WP_075240603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157076.1;locus_tag=IXO1104_RS15670;product=Xaa-Pro peptidase family protein;protein_id=WP_075240603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3433397 3435013 . - . ID=gene-IXO1104_RS15675;Name=IXO1104_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15675;old_locus_tag=IXO1104_15660 NZ_CP047492.1 Protein Homology CDS 3433397 3435013 . - 0 ID=cds-WP_075240602.1;Parent=gene-IXO1104_RS15675;Dbxref=Genbank:WP_075240602.1;Name=WP_075240602.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173723.1;locus_tag=IXO1104_RS15675;product=aldehyde dehydrogenase family protein;protein_id=WP_075240602.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3435224 3436132 . - . ID=gene-IXO1104_RS15680;Name=IXO1104_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15680;old_locus_tag=IXO1104_15665 NZ_CP047492.1 Protein Homology CDS 3435224 3436132 . - 0 ID=cds-WP_011259664.1;Parent=gene-IXO1104_RS15680;Dbxref=Genbank:WP_011259664.1;Name=WP_011259664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451841.1;locus_tag=IXO1104_RS15680;product=dihydrodipicolinate synthase family protein;protein_id=WP_011259664.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3436129 3437442 . - . ID=gene-IXO1104_RS15685;Name=IXO1104_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15685;old_locus_tag=IXO1104_15670 NZ_CP047492.1 Protein Homology CDS 3436129 3437442 . - 0 ID=cds-WP_241846809.1;Parent=gene-IXO1104_RS15685;Dbxref=Genbank:WP_241846809.1;Name=WP_241846809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172038.1;locus_tag=IXO1104_RS15685;product=FAD-dependent oxidoreductase;protein_id=WP_241846809.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3437435 3437680 . - . ID=gene-IXO1104_RS15690;Name=IXO1104_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15690;old_locus_tag=IXO1104_15675 NZ_CP047492.1 Protein Homology CDS 3437435 3437680 . - 0 ID=cds-WP_011259666.1;Parent=gene-IXO1104_RS15690;Dbxref=Genbank:WP_011259666.1;Name=WP_011259666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301582.1;locus_tag=IXO1104_RS15690;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011259666.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3437677 3438939 . - . ID=gene-IXO1104_RS15695;Name=IXO1104_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15695;old_locus_tag=IXO1104_15680 NZ_CP047492.1 Protein Homology CDS 3437677 3438939 . - 0 ID=cds-WP_011259667.1;Parent=gene-IXO1104_RS15695;Dbxref=Genbank:WP_011259667.1;Name=WP_011259667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363454.1;locus_tag=IXO1104_RS15695;product=FAD-binding oxidoreductase;protein_id=WP_011259667.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3438939 3439877 . - . ID=gene-IXO1104_RS15700;Name=IXO1104_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15700;old_locus_tag=IXO1104_15685 NZ_CP047492.1 Protein Homology CDS 3438939 3439877 . - 0 ID=cds-WP_011409014.1;Parent=gene-IXO1104_RS15700;Dbxref=Genbank:WP_011409014.1;Name=WP_011409014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810965.1;locus_tag=IXO1104_RS15700;product=proline racemase family protein;protein_id=WP_011409014.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3440035 3440751 . + . ID=gene-IXO1104_RS15705;Name=IXO1104_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15705;old_locus_tag=IXO1104_15690 NZ_CP047492.1 Protein Homology CDS 3440035 3440751 . + 0 ID=cds-WP_011409015.1;Parent=gene-IXO1104_RS15705;Dbxref=Genbank:WP_011409015.1;Name=WP_011409015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965956.1;locus_tag=IXO1104_RS15705;product=AraC family transcriptional regulator;protein_id=WP_011409015.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3440956 3442572 . + . ID=gene-IXO1104_RS15710;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=IXO1104_RS15710;old_locus_tag=IXO1104_15695 NZ_CP047492.1 Protein Homology CDS 3440956 3442572 . + 0 ID=cds-WP_075240600.1;Parent=gene-IXO1104_RS15710;Dbxref=Genbank:WP_075240600.1;Name=WP_075240600.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157084.1;locus_tag=IXO1104_RS15710;product=signal recognition particle-docking protein FtsY;protein_id=WP_075240600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3442951 3443027 . + . ID=gene-IXO1104_RS15715;Name=IXO1104_RS15715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS15715;old_locus_tag=IXO1104_15700 NZ_CP047492.1 cmsearch ncRNA 3442951 3443027 . + . ID=rna-IXO1104_RS15715;Parent=gene-IXO1104_RS15715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15715;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3442951 3443027 . + . ID=exon-IXO1104_RS15715-1;Parent=rna-IXO1104_RS15715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15715;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3443051 3444124 . + . ID=gene-IXO1104_RS15720;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=IXO1104_RS15720;old_locus_tag=IXO1104_15705 NZ_CP047492.1 Protein Homology CDS 3443051 3444124 . + 0 ID=cds-WP_011259671.1;Parent=gene-IXO1104_RS15720;Dbxref=Genbank:WP_011259671.1;Name=WP_011259671.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157085.1;locus_tag=IXO1104_RS15720;product=A/G-specific adenine glycosylase;protein_id=WP_011259671.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3444148 3444426 . + . ID=gene-IXO1104_RS15725;Name=IXO1104_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15725;old_locus_tag=IXO1104_15710 NZ_CP047492.1 Protein Homology CDS 3444148 3444426 . + 0 ID=cds-WP_027703322.1;Parent=gene-IXO1104_RS15725;Dbxref=Genbank:WP_027703322.1;Name=WP_027703322.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157086.1;locus_tag=IXO1104_RS15725;product=oxidative damage protection protein;protein_id=WP_027703322.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3444791 3446413 . - . ID=gene-IXO1104_RS15730;Name=IXO1104_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15730;old_locus_tag=IXO1104_15715 NZ_CP047492.1 Protein Homology CDS 3444791 3446413 . - 0 ID=cds-WP_011409018.1;Parent=gene-IXO1104_RS15730;Dbxref=Genbank:WP_011409018.1;Name=WP_011409018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347876.1;locus_tag=IXO1104_RS15730;product=histidine kinase famiy protein;protein_id=WP_011409018.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3447111 3447263 . + . ID=gene-IXO1104_RS15735;Name=IXO1104_RS15735;end_range=3447263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15735;old_locus_tag=IXO1104_15720;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3447111 3447263 . + 0 ID=cds-IXO1104_RS15735;Parent=gene-IXO1104_RS15735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3447263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363483.1;locus_tag=IXO1104_RS15735;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3447375 3448751 . + . ID=gene-IXO1104_RS15740;Name=IXO1104_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15740;old_locus_tag=IXO1104_15725 NZ_CP047492.1 Protein Homology CDS 3447375 3448751 . + 0 ID=cds-WP_133264775.1;Parent=gene-IXO1104_RS15740;Dbxref=Genbank:WP_133264775.1;Name=WP_133264775.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS15740;product=IS5 family transposase;protein_id=WP_133264775.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3448771 3449303 . + . ID=gene-IXO1104_RS15745;Name=IXO1104_RS15745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15745;old_locus_tag=IXO1104_15730;partial=true;pseudo=true;start_range=.,3448771 NZ_CP047492.1 Protein Homology CDS 3448771 3449303 . + 0 ID=cds-IXO1104_RS15745;Parent=gene-IXO1104_RS15745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448487.1;locus_tag=IXO1104_RS15745;partial=true;product=protein N-lysine methyltransferase family protein;pseudo=true;start_range=.,3448771;transl_table=11 NZ_CP047492.1 RefSeq gene 3449320 3449829 . - . ID=gene-IXO1104_RS15750;Name=IXO1104_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15750;old_locus_tag=IXO1104_15735 NZ_CP047492.1 Protein Homology CDS 3449320 3449829 . - 0 ID=cds-WP_011259678.1;Parent=gene-IXO1104_RS15750;Dbxref=Genbank:WP_011259678.1;Name=WP_011259678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167587.1;locus_tag=IXO1104_RS15750;product=hypothetical protein;protein_id=WP_011259678.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3450258 3450500 . - . ID=gene-IXO1104_RS15755;Name=IXO1104_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15755;old_locus_tag=IXO1104_15740 NZ_CP047492.1 Protein Homology CDS 3450258 3450500 . - 0 ID=cds-WP_011259679.1;Parent=gene-IXO1104_RS15755;Dbxref=Genbank:WP_011259679.1;Name=WP_011259679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409025.1;locus_tag=IXO1104_RS15755;product=hypothetical protein;protein_id=WP_011259679.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3450966 3451436 . + . ID=gene-IXO1104_RS15760;Name=IXO1104_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15760 NZ_CP047492.1 GeneMarkS-2+ CDS 3450966 3451436 . + 0 ID=cds-WP_228329666.1;Parent=gene-IXO1104_RS15760;Dbxref=Genbank:WP_228329666.1;Name=WP_228329666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15760;product=helix-turn-helix domain-containing protein;protein_id=WP_228329666.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3451516 3452439 . - . ID=gene-IXO1104_RS15765;Name=IXO1104_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15765;old_locus_tag=IXO1104_15755 NZ_CP047492.1 Protein Homology CDS 3451516 3452439 . - 0 ID=cds-WP_011259680.1;Parent=gene-IXO1104_RS15765;Dbxref=Genbank:WP_011259680.1;Name=WP_011259680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259680.1;locus_tag=IXO1104_RS15765;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_011259680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3452436 3453035 . - . ID=gene-IXO1104_RS15770;Name=IXO1104_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15770;old_locus_tag=IXO1104_15760 NZ_CP047492.1 Protein Homology CDS 3452436 3453035 . - 0 ID=cds-WP_011409027.1;Parent=gene-IXO1104_RS15770;Dbxref=Genbank:WP_011409027.1;Name=WP_011409027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409027.1;locus_tag=IXO1104_RS15770;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_011409027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3453400 3453690 . + . ID=gene-IXO1104_RS15775;Name=IXO1104_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15775;old_locus_tag=IXO1104_15770 NZ_CP047492.1 Protein Homology CDS 3453400 3453690 . + 0 ID=cds-WP_233282844.1;Parent=gene-IXO1104_RS15775;Dbxref=Genbank:WP_233282844.1;Name=WP_233282844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409028.1;locus_tag=IXO1104_RS15775;product=FaeA/PapI family transcriptional regulator;protein_id=WP_233282844.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3453722 3454210 . + . ID=gene-IXO1104_RS15780;Name=IXO1104_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15780;old_locus_tag=IXO1104_15775 NZ_CP047492.1 Protein Homology CDS 3453722 3454210 . + 0 ID=cds-WP_044756654.1;Parent=gene-IXO1104_RS15780;Dbxref=Genbank:WP_044756654.1;Name=WP_044756654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445458.1;locus_tag=IXO1104_RS15780;product=BrxE family protein;protein_id=WP_044756654.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3454197 3454995 . - . ID=gene-IXO1104_RS15785;Name=IXO1104_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15785;old_locus_tag=IXO1104_15780 NZ_CP047492.1 Protein Homology CDS 3454724 3454995 . - 0 ID=cds-WP_094187731.1-2;Parent=gene-IXO1104_RS15785;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS15785;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3454197 3454725 . - 1 ID=cds-WP_094187731.1-2;Parent=gene-IXO1104_RS15785;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS15785;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3455131 3456164 . - . ID=gene-IXO1104_RS15790;Name=IXO1104_RS15790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15790;old_locus_tag=IXO1104_15785;pseudo=true NZ_CP047492.1 Protein Homology CDS 3455131 3456164 . - 0 ID=cds-IXO1104_RS15790;Parent=gene-IXO1104_RS15790;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1104_RS15790;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3456678 3456953 . + . ID=gene-IXO1104_RS15795;Name=IXO1104_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15795 NZ_CP047492.1 GeneMarkS-2+ CDS 3456678 3456953 . + 0 ID=cds-WP_263117720.1;Parent=gene-IXO1104_RS15795;Dbxref=Genbank:WP_263117720.1;Name=WP_263117720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15795;product=hypothetical protein;protein_id=WP_263117720.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3456934 3457308 . + . ID=gene-IXO1104_RS15800;Name=IXO1104_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15800 NZ_CP047492.1 GeneMarkS-2+ CDS 3456934 3457308 . + 0 ID=cds-WP_229002607.1;Parent=gene-IXO1104_RS15800;Dbxref=Genbank:WP_229002607.1;Name=WP_229002607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15800;product=hypothetical protein;protein_id=WP_229002607.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3457406 3457481 . - . ID=gene-IXO1104_RS15805;Name=IXO1104_RS15805;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS15805;old_locus_tag=IXO1104_15800 NZ_CP047492.1 tRNAscan-SE tRNA 3457406 3457481 . - . ID=rna-IXO1104_RS15805;Parent=gene-IXO1104_RS15805;anticodon=(pos:complement(3457446..3457448));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15805;product=tRNA-Phe NZ_CP047492.1 tRNAscan-SE exon 3457406 3457481 . - . ID=exon-IXO1104_RS15805-1;Parent=rna-IXO1104_RS15805;anticodon=(pos:complement(3457446..3457448));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15805;product=tRNA-Phe NZ_CP047492.1 RefSeq gene 3457678 3458214 . + . ID=gene-IXO1104_RS15810;Name=IXO1104_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15810;old_locus_tag=IXO1104_15805 NZ_CP047492.1 Protein Homology CDS 3457678 3458214 . + 0 ID=cds-WP_024743012.1;Parent=gene-IXO1104_RS15810;Dbxref=Genbank:WP_024743012.1;Name=WP_024743012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157093.1;locus_tag=IXO1104_RS15810;product=lipocalin family protein;protein_id=WP_024743012.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3458305 3459951 . - . ID=gene-IXO1104_RS15815;Name=IXO1104_RS15815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15815;old_locus_tag=IXO1104_15810;partial=true;pseudo=true;start_range=.,3458305 NZ_CP047492.1 Protein Homology CDS 3458305 3459951 . - 0 ID=cds-IXO1104_RS15815;Parent=gene-IXO1104_RS15815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163234.1;locus_tag=IXO1104_RS15815;partial=true;product=serine peptidase;pseudo=true;start_range=.,3458305;transl_table=11 NZ_CP047492.1 RefSeq gene 3460087 3460483 . + . ID=gene-IXO1104_RS15820;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=IXO1104_RS15820;old_locus_tag=IXO1104_15815 NZ_CP047492.1 cmsearch tmRNA 3460087 3460483 . + . ID=rna-IXO1104_RS15820;Parent=gene-IXO1104_RS15820;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15820;product=transfer-messenger RNA NZ_CP047492.1 cmsearch exon 3460087 3460483 . + . ID=exon-IXO1104_RS15820-1;Parent=rna-IXO1104_RS15820;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS15820;product=transfer-messenger RNA NZ_CP047492.1 RefSeq gene 3461005 3462087 . + . ID=gene-IXO1104_RS15825;Name=IXO1104_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15825;old_locus_tag=IXO1104_15825 NZ_CP047492.1 Protein Homology CDS 3461005 3462087 . + 0 ID=cds-WP_117231630.1;Parent=gene-IXO1104_RS15825;Dbxref=Genbank:WP_117231630.1;Name=WP_117231630.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=IXO1104_RS15825;product=IS630 family transposase;protein_id=WP_117231630.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3462205 3463205 . - . ID=gene-IXO1104_RS15830;Name=IXO1104_RS15830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15830;old_locus_tag=IXO1104_15830;pseudo=true NZ_CP047492.1 Protein Homology CDS 3462205 3463205 . - 0 ID=cds-IXO1104_RS15830;Parent=gene-IXO1104_RS15830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173582.1;locus_tag=IXO1104_RS15830;product=TraB/GumN family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3463295 3463756 . - . ID=gene-IXO1104_RS15835;Name=IXO1104_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15835;old_locus_tag=IXO1104_15835 NZ_CP047492.1 Protein Homology CDS 3463295 3463756 . - 0 ID=cds-WP_011259690.1;Parent=gene-IXO1104_RS15835;Dbxref=Genbank:WP_011259690.1;Name=WP_011259690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502866.1;locus_tag=IXO1104_RS15835;product=cupin domain-containing protein;protein_id=WP_011259690.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3463791 3464585 . - . ID=gene-IXO1104_RS15840;Name=IXO1104_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15840;old_locus_tag=IXO1104_15840 NZ_CP047492.1 Protein Homology CDS 3463791 3464585 . - 0 ID=cds-WP_075239602.1;Parent=gene-IXO1104_RS15840;Dbxref=Genbank:WP_075239602.1;Name=WP_075239602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157106.1;locus_tag=IXO1104_RS15840;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_075239602.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3464590 3465384 . - . ID=gene-IXO1104_RS15845;Name=IXO1104_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15845;old_locus_tag=IXO1104_15845 NZ_CP047492.1 Protein Homology CDS 3464590 3465384 . - 0 ID=cds-WP_075240563.1;Parent=gene-IXO1104_RS15845;Dbxref=Genbank:WP_075240563.1;Name=WP_075240563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484852.1;locus_tag=IXO1104_RS15845;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_075240563.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3465421 3466617 . - . ID=gene-IXO1104_RS15850;Name=IXO1104_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15850;old_locus_tag=IXO1104_15850 NZ_CP047492.1 Protein Homology CDS 3465421 3466617 . - 0 ID=cds-WP_011259693.1;Parent=gene-IXO1104_RS15850;Dbxref=Genbank:WP_011259693.1;Name=WP_011259693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363526.1;locus_tag=IXO1104_RS15850;product=glycosyltransferase;protein_id=WP_011259693.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3466682 3468175 . - . ID=gene-IXO1104_RS15855;Name=IXO1104_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15855;old_locus_tag=IXO1104_15855 NZ_CP047492.1 Protein Homology CDS 3466682 3468175 . - 0 ID=cds-WP_011409038.1;Parent=gene-IXO1104_RS15855;Dbxref=Genbank:WP_011409038.1;Name=WP_011409038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157109.1;locus_tag=IXO1104_RS15855;product=lipopolysaccharide biosynthesis protein;protein_id=WP_011409038.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3468193 3469242 . - . ID=gene-IXO1104_RS15860;Name=IXO1104_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15860;old_locus_tag=IXO1104_15860 NZ_CP047492.1 Protein Homology CDS 3468193 3469242 . - 0 ID=cds-WP_011259695.1;Parent=gene-IXO1104_RS15860;Dbxref=Genbank:WP_011259695.1;Name=WP_011259695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157110.1;locus_tag=IXO1104_RS15860;product=glycosyltransferase;protein_id=WP_011259695.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3469239 3470381 . - . ID=gene-IXO1104_RS15865;Name=gumH;gbkey=Gene;gene=gumH;gene_biotype=protein_coding;locus_tag=IXO1104_RS15865;old_locus_tag=IXO1104_15865 NZ_CP047492.1 Protein Homology CDS 3469239 3470381 . - 0 ID=cds-WP_011259696.1;Parent=gene-IXO1104_RS15865;Dbxref=Genbank:WP_011259696.1;Name=WP_011259696.1;gbkey=CDS;gene=gumH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484848.1;locus_tag=IXO1104_RS15865;product=GDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase;protein_id=WP_011259696.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3470449 3471525 . - . ID=gene-IXO1104_RS15870;Name=IXO1104_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15870;old_locus_tag=IXO1104_15870 NZ_CP047492.1 Protein Homology CDS 3470449 3471525 . - 0 ID=cds-WP_094187837.1;Parent=gene-IXO1104_RS15870;Dbxref=Genbank:WP_094187837.1;Name=WP_094187837.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502860.1;locus_tag=IXO1104_RS15870;product=acyltransferase family protein;protein_id=WP_094187837.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3471542 3472633 . - . ID=gene-IXO1104_RS15875;Name=IXO1104_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15875;old_locus_tag=IXO1104_15875 NZ_CP047492.1 Protein Homology CDS 3471542 3472633 . - 0 ID=cds-WP_011259698.1;Parent=gene-IXO1104_RS15875;Dbxref=Genbank:WP_011259698.1;Name=WP_011259698.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574566.1;locus_tag=IXO1104_RS15875;product=acyltransferase family protein;protein_id=WP_011259698.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3472630 3473919 . - . ID=gene-IXO1104_RS15880;Name=IXO1104_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15880;old_locus_tag=IXO1104_15880 NZ_CP047492.1 Protein Homology CDS 3472630 3473919 . - 0 ID=cds-WP_049756340.1;Parent=gene-IXO1104_RS15880;Dbxref=Genbank:WP_049756340.1;Name=WP_049756340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117349.1;locus_tag=IXO1104_RS15880;product=hypothetical protein;protein_id=WP_049756340.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3474014 3475468 . - . ID=gene-IXO1104_RS15885;Name=IXO1104_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15885;old_locus_tag=IXO1104_15885 NZ_CP047492.1 Protein Homology CDS 3474014 3475468 . - 0 ID=cds-WP_011409041.1;Parent=gene-IXO1104_RS15885;Dbxref=Genbank:WP_011409041.1;Name=WP_011409041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914017.1;locus_tag=IXO1104_RS15885;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_011409041.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3475712 3477151 . - . ID=gene-IXO1104_RS15890;Name=IXO1104_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15890;old_locus_tag=IXO1104_15890 NZ_CP047492.1 Protein Homology CDS 3475712 3477151 . - 0 ID=cds-WP_075240013.1;Parent=gene-IXO1104_RS15890;Dbxref=Genbank:WP_075240013.1;Name=WP_075240013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=IXO1104_RS15890;product=GumC family protein;protein_id=WP_075240013.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3477133 3477831 . - . ID=gene-IXO1104_RS15895;Name=IXO1104_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15895;old_locus_tag=IXO1104_15895 NZ_CP047492.1 Protein Homology CDS 3477133 3477831 . - 0 ID=cds-WP_011259702.1;Parent=gene-IXO1104_RS15895;Dbxref=Genbank:WP_011259702.1;Name=WP_011259702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112207.1;locus_tag=IXO1104_RS15895;product=polysaccharide export protein;protein_id=WP_011259702.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3478303 3478379 . - . ID=gene-IXO1104_RS15900;Name=IXO1104_RS15900;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS15900;old_locus_tag=IXO1104_15900 NZ_CP047492.1 tRNAscan-SE tRNA 3478303 3478379 . - . ID=rna-IXO1104_RS15900;Parent=gene-IXO1104_RS15900;anticodon=(pos:complement(3478343..3478345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15900;product=tRNA-Pro NZ_CP047492.1 tRNAscan-SE exon 3478303 3478379 . - . ID=exon-IXO1104_RS15900-1;Parent=rna-IXO1104_RS15900;anticodon=(pos:complement(3478343..3478345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15900;product=tRNA-Pro NZ_CP047492.1 RefSeq gene 3478440 3478796 . - . ID=gene-IXO1104_RS15905;Name=IXO1104_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15905;old_locus_tag=IXO1104_15905 NZ_CP047492.1 Protein Homology CDS 3478440 3478796 . - 0 ID=cds-WP_005995911.1;Parent=gene-IXO1104_RS15905;Dbxref=Genbank:WP_005995911.1;Name=WP_005995911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=IXO1104_RS15905;product=MerR family transcriptional regulator;protein_id=WP_005995911.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3478777 3479076 . - . ID=gene-IXO1104_RS15910;Name=IXO1104_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15910;old_locus_tag=IXO1104_15910 NZ_CP047492.1 Protein Homology CDS 3478777 3479076 . - 0 ID=cds-WP_002811076.1;Parent=gene-IXO1104_RS15910;Dbxref=Genbank:WP_002811076.1;Name=WP_002811076.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811076.1;locus_tag=IXO1104_RS15910;product=integration host factor subunit alpha;protein_id=WP_002811076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3479098 3481476 . - . ID=gene-IXO1104_RS15915;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=IXO1104_RS15915;old_locus_tag=IXO1104_15915 NZ_CP047492.1 Protein Homology CDS 3479098 3481476 . - 0 ID=cds-WP_011259703.1;Parent=gene-IXO1104_RS15915;Dbxref=Genbank:WP_011259703.1;Name=WP_011259703.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=IXO1104_RS15915;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011259703.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3481585 3482580 . - . ID=gene-IXO1104_RS15920;Name=IXO1104_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15920;old_locus_tag=IXO1104_15920 NZ_CP047492.1 Protein Homology CDS 3481585 3482580 . - 0 ID=cds-WP_012445467.1;Parent=gene-IXO1104_RS15920;Dbxref=Genbank:WP_012445467.1;Name=WP_012445467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=IXO1104_RS15920;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_012445467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3482835 3483194 . - . ID=gene-IXO1104_RS15925;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=IXO1104_RS15925;old_locus_tag=IXO1104_15925 NZ_CP047492.1 Protein Homology CDS 3482835 3483194 . - 0 ID=cds-WP_012445468.1;Parent=gene-IXO1104_RS15925;Dbxref=Genbank:WP_012445468.1;Name=WP_012445468.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037598.1;locus_tag=IXO1104_RS15925;product=50S ribosomal protein L20;protein_id=WP_012445468.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3483205 3483402 . - . ID=gene-IXO1104_RS15930;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=IXO1104_RS15930;old_locus_tag=IXO1104_15930 NZ_CP047492.1 Protein Homology CDS 3483205 3483402 . - 0 ID=cds-WP_002811096.1;Parent=gene-IXO1104_RS15930;Dbxref=Genbank:WP_002811096.1;Name=WP_002811096.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=IXO1104_RS15930;product=50S ribosomal protein L35;protein_id=WP_002811096.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3483651 3484193 . - . ID=gene-IXO1104_RS15935;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=IXO1104_RS15935;old_locus_tag=IXO1104_15935 NZ_CP047492.1 Protein Homology CDS 3483651 3484193 . - 0 ID=cds-WP_080098376.1;Parent=gene-IXO1104_RS15935;Dbxref=Genbank:WP_080098376.1;Name=WP_080098376.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=IXO1104_RS15935;product=translation initiation factor IF-3;protein_id=WP_080098376.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3484242 3486146 . - . ID=gene-IXO1104_RS15940;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=IXO1104_RS15940;old_locus_tag=IXO1104_15940 NZ_CP047492.1 Protein Homology CDS 3484242 3486146 . - 0 ID=cds-WP_011409044.1;Parent=gene-IXO1104_RS15940;Dbxref=Genbank:WP_011409044.1;Name=WP_011409044.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303507.1;locus_tag=IXO1104_RS15940;product=threonine--tRNA ligase;protein_id=WP_011409044.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3486471 3486652 . + . ID=gene-IXO1104_RS15945;Name=IXO1104_RS15945;end_range=3486652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15945;old_locus_tag=IXO1104_15945;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3486471 3486652 . + 0 ID=cds-IXO1104_RS15945;Parent=gene-IXO1104_RS15945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=3486652,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930238.1;locus_tag=IXO1104_RS15945;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3486679 3486861 . - . ID=gene-IXO1104_RS15950;Name=IXO1104_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15950;old_locus_tag=IXO1104_15950 NZ_CP047492.1 Protein Homology CDS 3486679 3486861 . - 0 ID=cds-WP_012445471.1;Parent=gene-IXO1104_RS15950;Dbxref=Genbank:WP_012445471.1;Name=WP_012445471.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=IXO1104_RS15950;product=integrase core domain-containing protein;protein_id=WP_012445471.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3486949 3487830 . + . ID=gene-IXO1104_RS15955;Name=IXO1104_RS15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15955;old_locus_tag=IXO1104_15955;pseudo=true NZ_CP047492.1 Protein Homology CDS 3486949 3487830 . + 0 ID=cds-IXO1104_RS15955;Parent=gene-IXO1104_RS15955;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS15955;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3487827 3488048 . - . ID=gene-IXO1104_RS15960;Name=IXO1104_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15960 NZ_CP047492.1 GeneMarkS-2+ CDS 3487827 3488048 . - 0 ID=cds-WP_012445473.1;Parent=gene-IXO1104_RS15960;Dbxref=Genbank:WP_012445473.1;Name=WP_012445473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS15960;product=hypothetical protein;protein_id=WP_012445473.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3488214 3489449 . + . ID=gene-IXO1104_RS15965;Name=IXO1104_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15965;old_locus_tag=IXO1104_15965 NZ_CP047492.1 Protein Homology CDS 3488214 3489449 . + 0 ID=cds-WP_133264638.1;Parent=gene-IXO1104_RS15965;Dbxref=Genbank:WP_133264638.1;Name=WP_133264638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS15965;product=ISL3 family transposase;protein_id=WP_133264638.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3489589 3489663 . - . ID=gene-IXO1104_RS15970;Name=IXO1104_RS15970;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS15970;old_locus_tag=IXO1104_15970 NZ_CP047492.1 tRNAscan-SE tRNA 3489589 3489663 . - . ID=rna-IXO1104_RS15970;Parent=gene-IXO1104_RS15970;anticodon=(pos:complement(3489629..3489631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15970;product=tRNA-Val NZ_CP047492.1 tRNAscan-SE exon 3489589 3489663 . - . ID=exon-IXO1104_RS15970-1;Parent=rna-IXO1104_RS15970;anticodon=(pos:complement(3489629..3489631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS15970;product=tRNA-Val NZ_CP047492.1 RefSeq gene 3489759 3491780 . - . ID=gene-IXO1104_RS15975;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=IXO1104_RS15975;old_locus_tag=IXO1104_15975 NZ_CP047492.1 Protein Homology CDS 3489759 3491780 . - 0 ID=cds-WP_011259712.1;Parent=gene-IXO1104_RS15975;Dbxref=Genbank:WP_011259712.1;Name=WP_011259712.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037621.1;locus_tag=IXO1104_RS15975;product=excinuclease ABC subunit UvrB;protein_id=WP_011259712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3491919 3492461 . + . ID=gene-IXO1104_RS15980;Name=IXO1104_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15980;old_locus_tag=IXO1104_15980 NZ_CP047492.1 Protein Homology CDS 3491919 3492461 . + 0 ID=cds-WP_011259713.1;Parent=gene-IXO1104_RS15980;Dbxref=Genbank:WP_011259713.1;Name=WP_011259713.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371290.1;locus_tag=IXO1104_RS15980;product=GspH/FimT family pseudopilin;protein_id=WP_011259713.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3492986 3493519 . - . ID=gene-IXO1104_RS15985;Name=IXO1104_RS15985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15985;old_locus_tag=IXO1104_15985;partial=true;pseudo=true;start_range=.,3492986 NZ_CP047492.1 Protein Homology CDS 3492986 3493519 . - 0 ID=cds-IXO1104_RS15985;Parent=gene-IXO1104_RS15985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807750.1;locus_tag=IXO1104_RS15985;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3492986;transl_table=11 NZ_CP047492.1 RefSeq gene 3493546 3494277 . - . ID=gene-IXO1104_RS15990;Name=IXO1104_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS15990 NZ_CP047492.1 Protein Homology CDS 3493546 3494277 . - 0 ID=cds-WP_048484533.1;Parent=gene-IXO1104_RS15990;Dbxref=Genbank:WP_048484533.1;Name=WP_048484533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503414.1;locus_tag=IXO1104_RS15990;product=hypothetical protein;protein_id=WP_048484533.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3494414 3495397 . - . ID=gene-IXO1104_RS15995;Name=IXO1104_RS15995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS15995;old_locus_tag=IXO1104_15995;pseudo=true NZ_CP047492.1 Protein Homology CDS 3494414 3495397 . - 0 ID=cds-IXO1104_RS15995;Parent=gene-IXO1104_RS15995;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS15995;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3495471 3498305 . - . ID=gene-IXO1104_RS16000;Name=IXO1104_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16000;old_locus_tag=IXO1104_16000 NZ_CP047492.1 Protein Homology CDS 3495471 3498305 . - 0 ID=cds-WP_164994147.1;Parent=gene-IXO1104_RS16000;Dbxref=Genbank:WP_164994147.1;Name=WP_164994147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445479.1;locus_tag=IXO1104_RS16000;product=hypothetical protein;protein_id=WP_164994147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3498302 3499231 . - . ID=gene-IXO1104_RS16005;Name=IXO1104_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16005;old_locus_tag=IXO1104_16005 NZ_CP047492.1 Protein Homology CDS 3498302 3499231 . - 0 ID=cds-WP_012444637.1-2;Parent=gene-IXO1104_RS16005;Dbxref=Genbank:WP_012444637.1;Name=WP_012444637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1104_RS16005;product=DUF4123 domain-containing protein;protein_id=WP_012444637.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3500277 3500687 . + . ID=gene-IXO1104_RS16010;Name=IXO1104_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16010;old_locus_tag=IXO1104_16010 NZ_CP047492.1 Protein Homology CDS 3500277 3500687 . + 0 ID=cds-WP_164994148.1;Parent=gene-IXO1104_RS16010;Dbxref=Genbank:WP_164994148.1;Name=WP_164994148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501332.1;locus_tag=IXO1104_RS16010;product=PAAR domain-containing protein;protein_id=WP_164994148.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3500684 3501193 . + . ID=gene-IXO1104_RS16015;Name=IXO1104_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16015;old_locus_tag=IXO1104_16015 NZ_CP047492.1 Protein Homology CDS 3500684 3501193 . + 0 ID=cds-WP_075241110.1;Parent=gene-IXO1104_RS16015;Dbxref=Genbank:WP_075241110.1;Name=WP_075241110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260874.1;locus_tag=IXO1104_RS16015;product=DUF4123 domain-containing protein;protein_id=WP_075241110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3501174 3501515 . + . ID=gene-IXO1104_RS16020;Name=IXO1104_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16020;old_locus_tag=IXO1104_16020 NZ_CP047492.1 Protein Homology CDS 3501174 3501515 . + 0 ID=cds-WP_075241112.1;Parent=gene-IXO1104_RS16020;Dbxref=Genbank:WP_075241112.1;Name=WP_075241112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1104_RS16020;product=hypothetical protein;protein_id=WP_075241112.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3501529 3502239 . + . ID=gene-IXO1104_RS16025;Name=IXO1104_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16025;old_locus_tag=IXO1104_16025 NZ_CP047492.1 Protein Homology CDS 3501529 3502239 . + 0 ID=cds-WP_048484937.1;Parent=gene-IXO1104_RS16025;Dbxref=Genbank:WP_048484937.1;Name=WP_048484937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408157.1;locus_tag=IXO1104_RS16025;product=Tox-REase-5 domain-containing protein;protein_id=WP_048484937.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3502247 3503008 . + . ID=gene-IXO1104_RS16030;Name=IXO1104_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16030;old_locus_tag=IXO1104_16030 NZ_CP047492.1 Protein Homology CDS 3502247 3503008 . + 0 ID=cds-WP_080493798.1;Parent=gene-IXO1104_RS16030;Dbxref=Genbank:WP_080493798.1;Name=WP_080493798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026917.2;locus_tag=IXO1104_RS16030;product=Imm52 family immunity protein;protein_id=WP_080493798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3503436 3504137 . - . ID=gene-IXO1104_RS16035;Name=IXO1104_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16035;old_locus_tag=IXO1104_16035 NZ_CP047492.1 Protein Homology CDS 3503436 3504137 . - 0 ID=cds-WP_048484935.1;Parent=gene-IXO1104_RS16035;Dbxref=Genbank:WP_048484935.1;Name=WP_048484935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=IXO1104_RS16035;product=site-specific DNA-methyltransferase;protein_id=WP_048484935.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3504055 3504240 . - . ID=gene-IXO1104_RS16040;Name=IXO1104_RS16040;end_range=3504240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16040;old_locus_tag=IXO1104_16040;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3504055 3504240 . - 0 ID=cds-IXO1104_RS16040;Parent=gene-IXO1104_RS16040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3504240,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=IXO1104_RS16040;partial=true;product=Com family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3504151 3504357 . + . ID=gene-IXO1104_RS16045;Name=IXO1104_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16045 NZ_CP047492.1 Protein Homology CDS 3504151 3504357 . + 0 ID=cds-WP_228329740.1;Parent=gene-IXO1104_RS16045;Dbxref=Genbank:WP_228329740.1;Name=WP_228329740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171515.1;locus_tag=IXO1104_RS16045;product=hypothetical protein;protein_id=WP_228329740.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3504326 3505348 . - . ID=gene-IXO1104_RS16050;Name=IXO1104_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16050;old_locus_tag=IXO1104_16045 NZ_CP047492.1 Protein Homology CDS 3504326 3505348 . - 0 ID=cds-WP_075244554.1;Parent=gene-IXO1104_RS16050;Dbxref=Genbank:WP_075244554.1;Name=WP_075244554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408154.1;locus_tag=IXO1104_RS16050;product=phage portal protein;protein_id=WP_075244554.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3505348 3507111 . - . ID=gene-IXO1104_RS16055;Name=IXO1104_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16055;old_locus_tag=IXO1104_16050 NZ_CP047492.1 Protein Homology CDS 3505348 3507111 . - 0 ID=cds-WP_206737956.1;Parent=gene-IXO1104_RS16055;Dbxref=Genbank:WP_206737956.1;Name=WP_206737956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929437.1;locus_tag=IXO1104_RS16055;product=terminase ATPase subunit family protein;protein_id=WP_206737956.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3507254 3508096 . + . ID=gene-IXO1104_RS16060;Name=IXO1104_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16060;old_locus_tag=IXO1104_16055 NZ_CP047492.1 Protein Homology CDS 3507254 3508096 . + 0 ID=cds-WP_075245002.1;Parent=gene-IXO1104_RS16060;Dbxref=Genbank:WP_075245002.1;Name=WP_075245002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809139.1;locus_tag=IXO1104_RS16060;product=GPO family capsid scaffolding protein;protein_id=WP_075245002.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3508143 3509159 . + . ID=gene-IXO1104_RS16065;Name=IXO1104_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16065;old_locus_tag=IXO1104_16060 NZ_CP047492.1 Protein Homology CDS 3508143 3509159 . + 0 ID=cds-WP_075240426.1;Parent=gene-IXO1104_RS16065;Dbxref=Genbank:WP_075240426.1;Name=WP_075240426.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809141.1;locus_tag=IXO1104_RS16065;product=phage major capsid protein%2C P2 family;protein_id=WP_075240426.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3509163 3509882 . + . ID=gene-IXO1104_RS16070;Name=IXO1104_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16070;old_locus_tag=IXO1104_16065 NZ_CP047492.1 Protein Homology CDS 3509163 3509882 . + 0 ID=cds-WP_048484871.1;Parent=gene-IXO1104_RS16070;Dbxref=Genbank:WP_048484871.1;Name=WP_048484871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364022.1;locus_tag=IXO1104_RS16070;product=terminase endonuclease subunit;protein_id=WP_048484871.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3509982 3510449 . + . ID=gene-IXO1104_RS16075;Name=IXO1104_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16075;old_locus_tag=IXO1104_16070 NZ_CP047492.1 Protein Homology CDS 3509982 3510449 . + 0 ID=cds-WP_012445486.1;Parent=gene-IXO1104_RS16075;Dbxref=Genbank:WP_012445486.1;Name=WP_012445486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809166.1;locus_tag=IXO1104_RS16075;product=head completion/stabilization protein;protein_id=WP_012445486.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3510449 3510658 . + . ID=gene-IXO1104_RS16080;Name=IXO1104_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16080;old_locus_tag=IXO1104_16075 NZ_CP047492.1 Protein Homology CDS 3510449 3510658 . + 0 ID=cds-WP_048484873.1;Parent=gene-IXO1104_RS16080;Dbxref=Genbank:WP_048484873.1;Name=WP_048484873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868168.1;locus_tag=IXO1104_RS16080;product=tail protein X;protein_id=WP_048484873.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3510663 3511019 . + . ID=gene-IXO1104_RS16085;Name=IXO1104_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16085;old_locus_tag=IXO1104_16080 NZ_CP047492.1 Protein Homology CDS 3510663 3511019 . + 0 ID=cds-WP_011258472.1;Parent=gene-IXO1104_RS16085;Dbxref=Genbank:WP_011258472.1;Name=WP_011258472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929454.1;locus_tag=IXO1104_RS16085;product=phage holin family protein;protein_id=WP_011258472.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3511012 3511287 . + . ID=gene-IXO1104_RS16090;Name=IXO1104_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16090;old_locus_tag=IXO1104_16085 NZ_CP047492.1 Protein Homology CDS 3511012 3511287 . + 0 ID=cds-WP_041182057.1;Parent=gene-IXO1104_RS16090;Dbxref=Genbank:WP_041182057.1;Name=WP_041182057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167622.1;locus_tag=IXO1104_RS16090;product=phage holin family protein;protein_id=WP_041182057.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3511287 3511925 . + . ID=gene-IXO1104_RS16095;Name=IXO1104_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16095;old_locus_tag=IXO1104_16090 NZ_CP047492.1 Protein Homology CDS 3511287 3511925 . + 0 ID=cds-WP_011408146.1;Parent=gene-IXO1104_RS16095;Dbxref=Genbank:WP_011408146.1;Name=WP_011408146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572719.1;locus_tag=IXO1104_RS16095;product=glycoside hydrolase family 19 protein;protein_id=WP_011408146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3511925 3512413 . + . ID=gene-IXO1104_RS16100;Name=IXO1104_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16100;old_locus_tag=IXO1104_16095 NZ_CP047492.1 Protein Homology CDS 3511925 3512413 . + 0 ID=cds-WP_069959805.1;Parent=gene-IXO1104_RS16100;Dbxref=Genbank:WP_069959805.1;Name=WP_069959805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118585.1;locus_tag=IXO1104_RS16100;product=hypothetical protein;protein_id=WP_069959805.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3512410 3512829 . + . ID=gene-IXO1104_RS16105;Name=IXO1104_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16105;old_locus_tag=IXO1104_16100 NZ_CP047492.1 Protein Homology CDS 3512410 3512829 . + 0 ID=cds-WP_012445490.1;Parent=gene-IXO1104_RS16105;Dbxref=Genbank:WP_012445490.1;Name=WP_012445490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445490.1;locus_tag=IXO1104_RS16105;product=phage tail protein;protein_id=WP_012445490.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3512817 3513266 . + . ID=gene-IXO1104_RS16110;Name=IXO1104_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16110;old_locus_tag=IXO1104_16105 NZ_CP047492.1 Protein Homology CDS 3512817 3513266 . + 0 ID=cds-WP_075240744.1;Parent=gene-IXO1104_RS16110;Dbxref=Genbank:WP_075240744.1;Name=WP_075240744.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572725.1;locus_tag=IXO1104_RS16110;product=phage virion morphogenesis protein;protein_id=WP_075240744.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3513483 3515243 . + . ID=gene-IXO1104_RS16115;Name=IXO1104_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16115;old_locus_tag=IXO1104_16110 NZ_CP047492.1 Protein Homology CDS 3513483 3515243 . + 0 ID=cds-WP_075240745.1;Parent=gene-IXO1104_RS16115;Dbxref=Genbank:WP_075240745.1;Name=WP_075240745.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038237.1;locus_tag=IXO1104_RS16115;product=retron Ec67 family RNA-directed DNA polymerase/endonuclease;protein_id=WP_075240745.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3515617 3516507 . + . ID=gene-IXO1104_RS16120;Name=IXO1104_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16120;old_locus_tag=IXO1104_16115 NZ_CP047492.1 Protein Homology CDS 3515617 3516507 . + 0 ID=cds-WP_075240434.1;Parent=gene-IXO1104_RS16120;Dbxref=Genbank:WP_075240434.1;Name=WP_075240434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904173.1;locus_tag=IXO1104_RS16120;product=baseplate J/gp47 family protein;protein_id=WP_075240434.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3516500 3517045 . + . ID=gene-IXO1104_RS16125;Name=IXO1104_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16125;old_locus_tag=IXO1104_16120 NZ_CP047492.1 Protein Homology CDS 3516500 3517045 . + 0 ID=cds-WP_075240435.1;Parent=gene-IXO1104_RS16125;Dbxref=Genbank:WP_075240435.1;Name=WP_075240435.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118949.1;locus_tag=IXO1104_RS16125;product=phage tail protein I;protein_id=WP_075240435.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3517055 3518560 . + . ID=gene-IXO1104_RS16130;Name=IXO1104_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16130;old_locus_tag=IXO1104_16125 NZ_CP047492.1 Protein Homology CDS 3517055 3518560 . + 0 ID=cds-WP_075240436.1;Parent=gene-IXO1104_RS16130;Dbxref=Genbank:WP_075240436.1;Name=WP_075240436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408140.1;locus_tag=IXO1104_RS16130;product=phage tail protein;protein_id=WP_075240436.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3518568 3519146 . + . ID=gene-IXO1104_RS16135;Name=IXO1104_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16135;old_locus_tag=IXO1104_16130 NZ_CP047492.1 Protein Homology CDS 3518568 3519146 . + 0 ID=cds-WP_075240437.1;Parent=gene-IXO1104_RS16135;Dbxref=Genbank:WP_075240437.1;Name=WP_075240437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408139.1;locus_tag=IXO1104_RS16135;product=phage tail protein;protein_id=WP_075240437.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3519207 3519770 . + . ID=gene-IXO1104_RS16140;Name=IXO1104_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16140;old_locus_tag=IXO1104_16135 NZ_CP047492.1 Protein Homology CDS 3519207 3519770 . + 0 ID=cds-WP_011408138.1;Parent=gene-IXO1104_RS16140;Dbxref=Genbank:WP_011408138.1;Name=WP_011408138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809189.1;locus_tag=IXO1104_RS16140;product=phage baseplate assembly protein V;protein_id=WP_011408138.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3519767 3520126 . + . ID=gene-IXO1104_RS16145;Name=IXO1104_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16145;old_locus_tag=IXO1104_16140 NZ_CP047492.1 Protein Homology CDS 3519767 3520126 . + 0 ID=cds-WP_069959797.1;Parent=gene-IXO1104_RS16145;Dbxref=Genbank:WP_069959797.1;Name=WP_069959797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809191.1;locus_tag=IXO1104_RS16145;product=GPW/gp25 family protein;protein_id=WP_069959797.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3520138 3521304 . + . ID=gene-IXO1104_RS16150;Name=IXO1104_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16150;old_locus_tag=IXO1104_16145 NZ_CP047492.1 Protein Homology CDS 3520138 3521304 . + 0 ID=cds-WP_075240438.1;Parent=gene-IXO1104_RS16150;Dbxref=Genbank:WP_075240438.1;Name=WP_075240438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450506.1;locus_tag=IXO1104_RS16150;product=phage tail sheath protein;protein_id=WP_075240438.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3521335 3521844 . + . ID=gene-IXO1104_RS16155;Name=IXO1104_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16155;old_locus_tag=IXO1104_16150 NZ_CP047492.1 Protein Homology CDS 3521335 3521844 . + 0 ID=cds-WP_075240439.1;Parent=gene-IXO1104_RS16155;Dbxref=Genbank:WP_075240439.1;Name=WP_075240439.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038108.1;locus_tag=IXO1104_RS16155;product=phage major tail tube protein;protein_id=WP_075240439.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3521889 3522191 . + . ID=gene-IXO1104_RS16160;Name=IXO1104_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16160;old_locus_tag=IXO1104_16155 NZ_CP047492.1 Protein Homology CDS 3521889 3522191 . + 0 ID=cds-WP_012445500.1;Parent=gene-IXO1104_RS16160;Dbxref=Genbank:WP_012445500.1;Name=WP_012445500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962736.1;locus_tag=IXO1104_RS16160;product=phage tail assembly protein;protein_id=WP_012445500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3522200 3522313 . + . ID=gene-IXO1104_RS16165;Name=IXO1104_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16165;old_locus_tag=IXO1104_16160 NZ_CP047492.1 Protein Homology CDS 3522200 3522313 . + 0 ID=cds-WP_053502988.1;Parent=gene-IXO1104_RS16165;Dbxref=Genbank:WP_053502988.1;Name=WP_053502988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118941.1;locus_tag=IXO1104_RS16165;product=GpE family phage tail protein;protein_id=WP_053502988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3522343 3525213 . + . ID=gene-IXO1104_RS16170;Name=IXO1104_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16170;old_locus_tag=IXO1104_16165 NZ_CP047492.1 Protein Homology CDS 3522343 3525213 . + 0 ID=cds-WP_075240440.1;Parent=gene-IXO1104_RS16170;Dbxref=Genbank:WP_075240440.1;Name=WP_075240440.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167608.1;locus_tag=IXO1104_RS16170;product=phage tail tape measure protein;protein_id=WP_075240440.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3525226 3525627 . + . ID=gene-IXO1104_RS16175;Name=IXO1104_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16175;old_locus_tag=IXO1104_16170 NZ_CP047492.1 Protein Homology CDS 3525226 3525627 . + 0 ID=cds-WP_048483454.1;Parent=gene-IXO1104_RS16175;Dbxref=Genbank:WP_048483454.1;Name=WP_048483454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118939.1;locus_tag=IXO1104_RS16175;product=phage tail protein;protein_id=WP_048483454.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3525624 3526610 . + . ID=gene-IXO1104_RS16180;Name=IXO1104_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16180;old_locus_tag=IXO1104_16175 NZ_CP047492.1 Protein Homology CDS 3525624 3526610 . + 0 ID=cds-WP_048483455.1;Parent=gene-IXO1104_RS16180;Dbxref=Genbank:WP_048483455.1;Name=WP_048483455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258453.1;locus_tag=IXO1104_RS16180;product=phage late control D family protein;protein_id=WP_048483455.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3527218 3527649 . - . ID=gene-IXO1104_RS16185;Name=IXO1104_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16185;old_locus_tag=IXO1104_16180 NZ_CP047492.1 Protein Homology CDS 3527218 3527649 . - 0 ID=cds-WP_012445504.1;Parent=gene-IXO1104_RS16185;Dbxref=Genbank:WP_012445504.1;Name=WP_012445504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364083.1;locus_tag=IXO1104_RS16185;product=transcriptional regulator;protein_id=WP_012445504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3527722 3527982 . + . ID=gene-IXO1104_RS16190;Name=IXO1104_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16190;old_locus_tag=IXO1104_16185 NZ_CP047492.1 Protein Homology CDS 3527722 3527982 . + 0 ID=cds-WP_041182707.1;Parent=gene-IXO1104_RS16190;Dbxref=Genbank:WP_041182707.1;Name=WP_041182707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=IXO1104_RS16190;product=hypothetical protein;protein_id=WP_041182707.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3527985 3528302 . + . ID=gene-IXO1104_RS16195;Name=IXO1104_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16195;old_locus_tag=IXO1104_16190 NZ_CP047492.1 Protein Homology CDS 3527985 3528302 . + 0 ID=cds-WP_041182927.1;Parent=gene-IXO1104_RS16195;Dbxref=Genbank:WP_041182927.1;Name=WP_041182927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572766.1;locus_tag=IXO1104_RS16195;product=ogr/Delta-like zinc finger family protein;protein_id=WP_041182927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3528315 3528593 . + . ID=gene-IXO1104_RS16200;Name=IXO1104_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16200;old_locus_tag=IXO1104_16195 NZ_CP047492.1 Protein Homology CDS 3528315 3528593 . + 0 ID=cds-WP_048483459.1;Parent=gene-IXO1104_RS16200;Dbxref=Genbank:WP_048483459.1;Name=WP_048483459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167602.1;locus_tag=IXO1104_RS16200;product=hypothetical protein;protein_id=WP_048483459.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3528811 3531495 . + . ID=gene-IXO1104_RS16205;Name=IXO1104_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16205;old_locus_tag=IXO1104_16200 NZ_CP047492.1 Protein Homology CDS 3528811 3531495 . + 0 ID=cds-WP_075240441.1;Parent=gene-IXO1104_RS16205;Dbxref=Genbank:WP_075240441.1;Name=WP_075240441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258449.1;locus_tag=IXO1104_RS16205;product=toprim domain-containing protein;protein_id=WP_075240441.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3531819 3532037 . + . ID=gene-IXO1104_RS16210;Name=IXO1104_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16210;old_locus_tag=IXO1104_16205 NZ_CP047492.1 Protein Homology CDS 3531819 3532037 . + 0 ID=cds-WP_012445510.1;Parent=gene-IXO1104_RS16210;Dbxref=Genbank:WP_012445510.1;Name=WP_012445510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922222.1;locus_tag=IXO1104_RS16210;product=hypothetical protein;protein_id=WP_012445510.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3532034 3532312 . + . ID=gene-IXO1104_RS16215;Name=IXO1104_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16215;old_locus_tag=IXO1104_16210 NZ_CP047492.1 Protein Homology CDS 3532034 3532312 . + 0 ID=cds-WP_012445511.1;Parent=gene-IXO1104_RS16215;Dbxref=Genbank:WP_012445511.1;Name=WP_012445511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922224.1;locus_tag=IXO1104_RS16215;product=hypothetical protein;protein_id=WP_012445511.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3532332 3532574 . + . ID=gene-IXO1104_RS16220;Name=IXO1104_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16220;old_locus_tag=IXO1104_16215 NZ_CP047492.1 Protein Homology CDS 3532332 3532574 . + 0 ID=cds-WP_229002611.1;Parent=gene-IXO1104_RS16220;Dbxref=Genbank:WP_229002611.1;Name=WP_229002611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364102.1;locus_tag=IXO1104_RS16220;product=hypothetical protein;protein_id=WP_229002611.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3532654 3533073 . + . ID=gene-IXO1104_RS16225;Name=IXO1104_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16225;old_locus_tag=IXO1104_16220 NZ_CP047492.1 Protein Homology CDS 3532654 3533073 . + 0 ID=cds-WP_041182710.1;Parent=gene-IXO1104_RS16225;Dbxref=Genbank:WP_041182710.1;Name=WP_041182710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472864.1;locus_tag=IXO1104_RS16225;product=hypothetical protein;protein_id=WP_041182710.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3533066 3533248 . + . ID=gene-IXO1104_RS16230;Name=IXO1104_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16230;old_locus_tag=IXO1104_16225 NZ_CP047492.1 Protein Homology CDS 3533066 3533248 . + 0 ID=cds-WP_041182711.1;Parent=gene-IXO1104_RS16230;Dbxref=Genbank:WP_041182711.1;Name=WP_041182711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471751.1;locus_tag=IXO1104_RS16230;product=hypothetical protein;protein_id=WP_041182711.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3533241 3533513 . + . ID=gene-IXO1104_RS16235;Name=IXO1104_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16235;old_locus_tag=IXO1104_16230 NZ_CP047492.1 Protein Homology CDS 3533241 3533513 . + 0 ID=cds-WP_041182712.1;Parent=gene-IXO1104_RS16235;Dbxref=Genbank:WP_041182712.1;Name=WP_041182712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572785.1;locus_tag=IXO1104_RS16235;product=hypothetical protein;protein_id=WP_041182712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3533510 3533734 . + . ID=gene-IXO1104_RS16240;Name=IXO1104_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16240;old_locus_tag=IXO1104_16235 NZ_CP047492.1 Protein Homology CDS 3533510 3533734 . + 0 ID=cds-WP_008572787.1;Parent=gene-IXO1104_RS16240;Dbxref=Genbank:WP_008572787.1;Name=WP_008572787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091205.1;locus_tag=IXO1104_RS16240;product=hypothetical protein;protein_id=WP_008572787.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3533731 3534003 . + . ID=gene-IXO1104_RS16245;Name=IXO1104_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16245;old_locus_tag=IXO1104_16240 NZ_CP047492.1 Protein Homology CDS 3533731 3534003 . + 0 ID=cds-WP_041182713.1;Parent=gene-IXO1104_RS16245;Dbxref=Genbank:WP_041182713.1;Name=WP_041182713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408131.1;locus_tag=IXO1104_RS16245;product=hypothetical protein;protein_id=WP_041182713.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3534000 3534209 . + . ID=gene-IXO1104_RS16250;Name=IXO1104_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16250 NZ_CP047492.1 Protein Homology CDS 3534000 3534209 . + 0 ID=cds-WP_041182714.1;Parent=gene-IXO1104_RS16250;Dbxref=Genbank:WP_041182714.1;Name=WP_041182714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167594.1;locus_tag=IXO1104_RS16250;product=hypothetical protein;protein_id=WP_041182714.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3534206 3534424 . + . ID=gene-IXO1104_RS16255;Name=IXO1104_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16255 NZ_CP047492.1 Protein Homology CDS 3534206 3534424 . + 0 ID=cds-WP_047339976.1;Parent=gene-IXO1104_RS16255;Dbxref=Genbank:WP_047339976.1;Name=WP_047339976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051723.1;locus_tag=IXO1104_RS16255;product=hypothetical protein;protein_id=WP_047339976.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3534424 3535665 . + . ID=gene-IXO1104_RS16260;Name=IXO1104_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16260;old_locus_tag=IXO1104_16245 NZ_CP047492.1 Protein Homology CDS 3534424 3535665 . + 0 ID=cds-WP_048483467.1;Parent=gene-IXO1104_RS16260;Dbxref=Genbank:WP_048483467.1;Name=WP_048483467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051722.1;locus_tag=IXO1104_RS16260;product=integrase;protein_id=WP_048483467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3535743 3535819 . - . ID=gene-IXO1104_RS16265;Name=IXO1104_RS16265;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS16265;old_locus_tag=IXO1104_16250 NZ_CP047492.1 tRNAscan-SE tRNA 3535743 3535819 . - . ID=rna-IXO1104_RS16265;Parent=gene-IXO1104_RS16265;anticodon=(pos:complement(3535783..3535785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16265;product=tRNA-Asn NZ_CP047492.1 tRNAscan-SE exon 3535743 3535819 . - . ID=exon-IXO1104_RS16265-1;Parent=rna-IXO1104_RS16265;anticodon=(pos:complement(3535783..3535785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16265;product=tRNA-Asn NZ_CP047492.1 RefSeq gene 3535872 3536321 . - . ID=gene-IXO1104_RS16270;Name=IXO1104_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16270;old_locus_tag=IXO1104_16255 NZ_CP047492.1 Protein Homology CDS 3535872 3536321 . - 0 ID=cds-WP_042465105.1;Parent=gene-IXO1104_RS16270;Dbxref=Genbank:WP_042465105.1;Name=WP_042465105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116280.1;locus_tag=IXO1104_RS16270;product=type IV pilin protein;protein_id=WP_042465105.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3536334 3540263 . - . ID=gene-IXO1104_RS16275;Name=IXO1104_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16275;old_locus_tag=IXO1104_16260 NZ_CP047492.1 Protein Homology CDS 3536334 3540263 . - 0 ID=cds-WP_241846810.1;Parent=gene-IXO1104_RS16275;Dbxref=Genbank:WP_241846810.1;Name=WP_241846810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371284.1;locus_tag=IXO1104_RS16275;product=PilC/PilY family type IV pilus protein;protein_id=WP_241846810.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3540274 3540783 . - . ID=gene-IXO1104_RS16280;Name=IXO1104_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16280;old_locus_tag=IXO1104_16265 NZ_CP047492.1 Protein Homology CDS 3540274 3540783 . - 0 ID=cds-WP_011259718.1;Parent=gene-IXO1104_RS16280;Dbxref=Genbank:WP_011259718.1;Name=WP_011259718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259718.1;locus_tag=IXO1104_RS16280;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=WP_011259718.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3540787 3541953 . - . ID=gene-IXO1104_RS16285;Name=IXO1104_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16285;old_locus_tag=IXO1104_16270 NZ_CP047492.1 Protein Homology CDS 3540787 3541953 . - 0 ID=cds-WP_011259719.1;Parent=gene-IXO1104_RS16285;Dbxref=Genbank:WP_011259719.1;Name=WP_011259719.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259719.1;locus_tag=IXO1104_RS16285;product=PilW family protein;protein_id=WP_011259719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3541950 3542423 . - . ID=gene-IXO1104_RS16290;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=IXO1104_RS16290;old_locus_tag=IXO1104_16275 NZ_CP047492.1 Protein Homology CDS 3541950 3542423 . - 0 ID=cds-WP_011259720.1;Parent=gene-IXO1104_RS16290;Dbxref=Genbank:WP_011259720.1;Name=WP_011259720.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259720.1;locus_tag=IXO1104_RS16290;product=type IV pilus modification protein PilV;protein_id=WP_011259720.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3542420 3542935 . - . ID=gene-IXO1104_RS16295;Name=IXO1104_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16295;old_locus_tag=IXO1104_16280 NZ_CP047492.1 Protein Homology CDS 3542420 3542935 . - 0 ID=cds-WP_011259721.1;Parent=gene-IXO1104_RS16295;Dbxref=Genbank:WP_011259721.1;Name=WP_011259721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259721.1;locus_tag=IXO1104_RS16295;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_011259721.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3543105 3544490 . - . ID=gene-IXO1104_RS16300;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=IXO1104_RS16300;old_locus_tag=IXO1104_16285 NZ_CP047492.1 Protein Homology CDS 3543105 3544490 . - 0 ID=cds-WP_011259722.1;Parent=gene-IXO1104_RS16300;Dbxref=Genbank:WP_011259722.1;Name=WP_011259722.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154671.1;locus_tag=IXO1104_RS16300;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_011259722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3544597 3547791 . - . ID=gene-IXO1104_RS16305;Name=IXO1104_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16305;old_locus_tag=IXO1104_16290 NZ_CP047492.1 Protein Homology CDS 3544597 3547791 . - 0 ID=cds-WP_011259723.1;Parent=gene-IXO1104_RS16305;Dbxref=Genbank:WP_011259723.1;Name=WP_011259723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167812.1;locus_tag=IXO1104_RS16305;product=TonB-dependent receptor;protein_id=WP_011259723.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3548404 3548480 . - . ID=gene-IXO1104_RS16310;Name=IXO1104_RS16310;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS16310;old_locus_tag=IXO1104_16295 NZ_CP047492.1 cmsearch ncRNA 3548404 3548480 . - . ID=rna-IXO1104_RS16310;Parent=gene-IXO1104_RS16310;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16310;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3548404 3548480 . - . ID=exon-IXO1104_RS16310-1;Parent=rna-IXO1104_RS16310;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16310;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3548549 3549148 . - . ID=gene-IXO1104_RS16315;Name=IXO1104_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16315;old_locus_tag=IXO1104_16300 NZ_CP047492.1 Protein Homology CDS 3548549 3549148 . - 0 ID=cds-WP_011409048.1;Parent=gene-IXO1104_RS16315;Dbxref=Genbank:WP_011409048.1;Name=WP_011409048.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810180.1;locus_tag=IXO1104_RS16315;product=YhgN family NAAT transporter;protein_id=WP_011409048.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3549145 3549888 . - . ID=gene-IXO1104_RS16320;Name=IXO1104_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16320;old_locus_tag=IXO1104_16305 NZ_CP047492.1 Protein Homology CDS 3549145 3549888 . - 0 ID=cds-WP_011259725.1;Parent=gene-IXO1104_RS16320;Dbxref=Genbank:WP_011259725.1;Name=WP_011259725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503773.1;locus_tag=IXO1104_RS16320;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011259725.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3549885 3550205 . - . ID=gene-IXO1104_RS16325;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=IXO1104_RS16325;old_locus_tag=IXO1104_16310 NZ_CP047492.1 Protein Homology CDS 3549885 3550205 . - 0 ID=cds-WP_011259726.1;Parent=gene-IXO1104_RS16325;Dbxref=Genbank:WP_011259726.1;Name=WP_011259726.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485599.1;locus_tag=IXO1104_RS16325;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011259726.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3550327 3550905 . + . ID=gene-IXO1104_RS16330;Name=IXO1104_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16330;old_locus_tag=IXO1104_16315 NZ_CP047492.1 Protein Homology CDS 3550327 3550905 . + 0 ID=cds-WP_011259727.1;Parent=gene-IXO1104_RS16330;Dbxref=Genbank:WP_011259727.1;Name=WP_011259727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259727.1;locus_tag=IXO1104_RS16330;product=superoxide dismutase;protein_id=WP_011259727.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3551047 3552192 . - . ID=gene-IXO1104_RS16335;Name=IXO1104_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16335;old_locus_tag=IXO1104_16320 NZ_CP047492.1 Protein Homology CDS 3551047 3552192 . - 0 ID=cds-WP_011259728.1;Parent=gene-IXO1104_RS16335;Dbxref=Genbank:WP_011259728.1;Name=WP_011259728.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051762.1;locus_tag=IXO1104_RS16335;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_011259728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3552189 3552692 . - . ID=gene-IXO1104_RS16340;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=IXO1104_RS16340;old_locus_tag=IXO1104_16325 NZ_CP047492.1 Protein Homology CDS 3552189 3552692 . - 0 ID=cds-WP_027703386.1;Parent=gene-IXO1104_RS16340;Dbxref=Genbank:WP_027703386.1;Name=WP_027703386.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468225.1;locus_tag=IXO1104_RS16340;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_027703386.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3552751 3553020 . + . ID=gene-IXO1104_RS16345;Name=IXO1104_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16345;old_locus_tag=IXO1104_16330 NZ_CP047492.1 Protein Homology CDS 3552751 3553020 . + 0 ID=cds-WP_027703385.1;Parent=gene-IXO1104_RS16345;Dbxref=Genbank:WP_027703385.1;Name=WP_027703385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570984.1;locus_tag=IXO1104_RS16345;product=hypothetical protein;protein_id=WP_027703385.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3553017 3553904 . + . ID=gene-IXO1104_RS16350;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=IXO1104_RS16350;old_locus_tag=IXO1104_16335 NZ_CP047492.1 Protein Homology CDS 3553017 3553904 . + 0 ID=cds-WP_024710844.1;Parent=gene-IXO1104_RS16350;Dbxref=Genbank:WP_024710844.1;Name=WP_024710844.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158758.1;locus_tag=IXO1104_RS16350;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_024710844.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3553968 3555008 . + . ID=gene-IXO1104_RS16355;Name=IXO1104_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16355;old_locus_tag=IXO1104_16340 NZ_CP047492.1 Protein Homology CDS 3553968 3555008 . + 0 ID=cds-WP_075239927.1;Parent=gene-IXO1104_RS16355;Dbxref=Genbank:WP_075239927.1;Name=WP_075239927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409052.1;locus_tag=IXO1104_RS16355;product=DUF2272 domain-containing protein;protein_id=WP_075239927.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3555382 3557496 . - . ID=gene-IXO1104_RS16360;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=IXO1104_RS16360;old_locus_tag=IXO1104_16345 NZ_CP047492.1 Protein Homology CDS 3555382 3557496 . - 0 ID=cds-WP_011259733.1;Parent=gene-IXO1104_RS16360;Dbxref=Genbank:WP_011259733.1;Name=WP_011259733.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259733.1;locus_tag=IXO1104_RS16360;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_011259733.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3557662 3557922 . - . ID=gene-IXO1104_RS16365;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=IXO1104_RS16365;old_locus_tag=IXO1104_16350 NZ_CP047492.1 Protein Homology CDS 3557662 3557922 . - 0 ID=cds-WP_003485583.1;Parent=gene-IXO1104_RS16365;Dbxref=Genbank:WP_003485583.1;Name=WP_003485583.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=IXO1104_RS16365;product=30S ribosomal protein S15;protein_id=WP_003485583.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3558079 3559005 . - . ID=gene-IXO1104_RS16370;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=IXO1104_RS16370;old_locus_tag=IXO1104_16355 NZ_CP047492.1 Protein Homology CDS 3558079 3559005 . - 0 ID=cds-WP_011259734.1;Parent=gene-IXO1104_RS16370;Dbxref=Genbank:WP_011259734.1;Name=WP_011259734.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848688.1;locus_tag=IXO1104_RS16370;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_011259734.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3559085 3559477 . - . ID=gene-IXO1104_RS16375;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=IXO1104_RS16375;old_locus_tag=IXO1104_16360 NZ_CP047492.1 Protein Homology CDS 3559085 3559477 . - 0 ID=cds-WP_011259735.1;Parent=gene-IXO1104_RS16375;Dbxref=Genbank:WP_011259735.1;Name=WP_011259735.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051765.1;locus_tag=IXO1104_RS16375;product=30S ribosome-binding factor RbfA;protein_id=WP_011259735.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3559621 3562341 . - . ID=gene-IXO1104_RS16380;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=IXO1104_RS16380;old_locus_tag=IXO1104_16365 NZ_CP047492.1 Protein Homology CDS 3559621 3562341 . - 0 ID=cds-WP_011409053.1;Parent=gene-IXO1104_RS16380;Dbxref=Genbank:WP_011409053.1;Name=WP_011409053.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159225.1;locus_tag=IXO1104_RS16380;product=translation initiation factor IF-2;protein_id=WP_011409053.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3562437 3563948 . - . ID=gene-IXO1104_RS16385;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=IXO1104_RS16385;old_locus_tag=IXO1104_16370 NZ_CP047492.1 Protein Homology CDS 3562437 3563948 . - 0 ID=cds-WP_011259737.1;Parent=gene-IXO1104_RS16385;Dbxref=Genbank:WP_011259737.1;Name=WP_011259737.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=IXO1104_RS16385;product=transcription termination factor NusA;protein_id=WP_011259737.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3563953 3564543 . - . ID=gene-IXO1104_RS16390;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=IXO1104_RS16390;old_locus_tag=IXO1104_16375 NZ_CP047492.1 Protein Homology CDS 3563953 3564543 . - 0 ID=cds-WP_011259738.1;Parent=gene-IXO1104_RS16390;Dbxref=Genbank:WP_011259738.1;Name=WP_011259738.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300413.1;locus_tag=IXO1104_RS16390;product=ribosome maturation factor RimP;protein_id=WP_011259738.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3564741 3564817 . - . ID=gene-IXO1104_RS16395;Name=IXO1104_RS16395;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS16395;old_locus_tag=IXO1104_16380 NZ_CP047492.1 tRNAscan-SE tRNA 3564741 3564817 . - . ID=rna-IXO1104_RS16395;Parent=gene-IXO1104_RS16395;anticodon=(pos:complement(3564781..3564783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16395;product=tRNA-Met NZ_CP047492.1 tRNAscan-SE exon 3564741 3564817 . - . ID=exon-IXO1104_RS16395-1;Parent=rna-IXO1104_RS16395;anticodon=(pos:complement(3564781..3564783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16395;product=tRNA-Met NZ_CP047492.1 RefSeq gene 3565018 3566478 . - . ID=gene-IXO1104_RS16400;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=IXO1104_RS16400;old_locus_tag=IXO1104_16385 NZ_CP047492.1 Protein Homology CDS 3565018 3566478 . - 0 ID=cds-WP_027703381.1;Parent=gene-IXO1104_RS16400;Dbxref=Genbank:WP_027703381.1;Name=WP_027703381.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485567.1;locus_tag=IXO1104_RS16400;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_027703381.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3566515 3568017 . - . ID=gene-IXO1104_RS16405;Name=IXO1104_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16405;old_locus_tag=IXO1104_16390 NZ_CP047492.1 Protein Homology CDS 3566515 3568017 . - 0 ID=cds-WP_011259740.1;Parent=gene-IXO1104_RS16405;Dbxref=Genbank:WP_011259740.1;Name=WP_011259740.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300411.1;locus_tag=IXO1104_RS16405;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_011259740.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3568038 3570197 . - . ID=gene-IXO1104_RS16410;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=IXO1104_RS16410;old_locus_tag=IXO1104_16395 NZ_CP047492.1 Protein Homology CDS 3568038 3570197 . - 0 ID=cds-WP_011259741.1;Parent=gene-IXO1104_RS16410;Dbxref=Genbank:WP_011259741.1;Name=WP_011259741.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485563.1;locus_tag=IXO1104_RS16410;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_011259741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3570205 3570510 . - . ID=gene-IXO1104_RS16415;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=IXO1104_RS16415;old_locus_tag=IXO1104_16400 NZ_CP047492.1 Protein Homology CDS 3570205 3570510 . - 0 ID=cds-WP_005914274.1;Parent=gene-IXO1104_RS16415;Dbxref=Genbank:WP_005914274.1;Name=WP_005914274.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450557.1;locus_tag=IXO1104_RS16415;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_005914274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3570507 3571169 . - . ID=gene-IXO1104_RS16420;Name=IXO1104_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16420;old_locus_tag=IXO1104_16405 NZ_CP047492.1 Protein Homology CDS 3570507 3571169 . - 0 ID=cds-WP_011409056.1;Parent=gene-IXO1104_RS16420;Dbxref=Genbank:WP_011409056.1;Name=WP_011409056.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237526.1;locus_tag=IXO1104_RS16420;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_011409056.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3571174 3571662 . - . ID=gene-IXO1104_RS16425;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=IXO1104_RS16425;old_locus_tag=IXO1104_16410 NZ_CP047492.1 Protein Homology CDS 3571174 3571662 . - 0 ID=cds-WP_011409057.1;Parent=gene-IXO1104_RS16425;Dbxref=Genbank:WP_011409057.1;Name=WP_011409057.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=IXO1104_RS16425;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011409057.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3571666 3572757 . - . ID=gene-IXO1104_RS16430;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=IXO1104_RS16430;old_locus_tag=IXO1104_16415 NZ_CP047492.1 Protein Homology CDS 3571666 3572757 . - 0 ID=cds-WP_011259744.1;Parent=gene-IXO1104_RS16430;Dbxref=Genbank:WP_011259744.1;Name=WP_011259744.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375869.1;locus_tag=IXO1104_RS16430;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_011259744.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3572754 3574988 . - . ID=gene-IXO1104_RS16435;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=IXO1104_RS16435;old_locus_tag=IXO1104_16420 NZ_CP047492.1 Protein Homology CDS 3572754 3574988 . - 0 ID=cds-WP_011259745.1;Parent=gene-IXO1104_RS16435;Dbxref=Genbank:WP_011259745.1;Name=WP_011259745.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347938.1;locus_tag=IXO1104_RS16435;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_011259745.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3574985 3576319 . - . ID=gene-IXO1104_RS16440;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=IXO1104_RS16440;old_locus_tag=IXO1104_16425 NZ_CP047492.1 Protein Homology CDS 3574985 3576319 . - 0 ID=cds-WP_011259746.1;Parent=gene-IXO1104_RS16440;Dbxref=Genbank:WP_011259746.1;Name=WP_011259746.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503795.1;locus_tag=IXO1104_RS16440;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_011259746.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3576323 3576850 . - . ID=gene-IXO1104_RS16445;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=IXO1104_RS16445;old_locus_tag=IXO1104_16430 NZ_CP047492.1 Protein Homology CDS 3576323 3576850 . - 0 ID=cds-WP_011259747.1;Parent=gene-IXO1104_RS16445;Dbxref=Genbank:WP_011259747.1;Name=WP_011259747.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=IXO1104_RS16445;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_011259747.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3576847 3578154 . - . ID=gene-IXO1104_RS16450;Name=IXO1104_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16450;old_locus_tag=IXO1104_16435 NZ_CP047492.1 Protein Homology CDS 3576847 3578154 . - 0 ID=cds-WP_011259748.1;Parent=gene-IXO1104_RS16450;Dbxref=Genbank:WP_011259748.1;Name=WP_011259748.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=IXO1104_RS16450;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_011259748.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3578151 3578903 . - . ID=gene-IXO1104_RS16455;Name=IXO1104_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16455;old_locus_tag=IXO1104_16440 NZ_CP047492.1 Protein Homology CDS 3578151 3578903 . - 0 ID=cds-WP_011259749.1;Parent=gene-IXO1104_RS16455;Dbxref=Genbank:WP_011259749.1;Name=WP_011259749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927494.1;locus_tag=IXO1104_RS16455;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_011259749.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3578940 3579494 . - . ID=gene-IXO1104_RS16460;Name=IXO1104_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16460;old_locus_tag=IXO1104_16445 NZ_CP047492.1 Protein Homology CDS 3578940 3579494 . - 0 ID=cds-WP_010371165.1;Parent=gene-IXO1104_RS16460;Dbxref=Genbank:WP_010371165.1;Name=WP_010371165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=IXO1104_RS16460;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_010371165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3579485 3579841 . - . ID=gene-IXO1104_RS16465;Name=IXO1104_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16465;old_locus_tag=IXO1104_16450 NZ_CP047492.1 Protein Homology CDS 3579485 3579841 . - 0 ID=cds-WP_011409060.1;Parent=gene-IXO1104_RS16465;Dbxref=Genbank:WP_011409060.1;Name=WP_011409060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=IXO1104_RS16465;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_011409060.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3579944 3580028 . - . ID=gene-IXO1104_RS16470;Name=IXO1104_RS16470;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS16470;old_locus_tag=IXO1104_16455 NZ_CP047492.1 tRNAscan-SE tRNA 3579944 3580028 . - . ID=rna-IXO1104_RS16470;Parent=gene-IXO1104_RS16470;anticodon=(pos:complement(3579992..3579994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16470;product=tRNA-Leu NZ_CP047492.1 tRNAscan-SE exon 3579944 3580028 . - . ID=exon-IXO1104_RS16470-1;Parent=rna-IXO1104_RS16470;anticodon=(pos:complement(3579992..3579994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS16470;product=tRNA-Leu NZ_CP047492.1 RefSeq gene 3580078 3580539 . - . ID=gene-IXO1104_RS16475;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=IXO1104_RS16475;old_locus_tag=IXO1104_16460 NZ_CP047492.1 Protein Homology CDS 3580078 3580539 . - 0 ID=cds-WP_011259752.1;Parent=gene-IXO1104_RS16475;Dbxref=Genbank:WP_011259752.1;Name=WP_011259752.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570967.1;locus_tag=IXO1104_RS16475;product=preprotein translocase subunit SecG;protein_id=WP_011259752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3580573 3581328 . - . ID=gene-IXO1104_RS16480;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=IXO1104_RS16480;old_locus_tag=IXO1104_16465 NZ_CP047492.1 Protein Homology CDS 3580573 3581328 . - 0 ID=cds-WP_011409061.1;Parent=gene-IXO1104_RS16480;Dbxref=Genbank:WP_011409061.1;Name=WP_011409061.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156090.1;locus_tag=IXO1104_RS16480;product=triose-phosphate isomerase;protein_id=WP_011409061.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3581441 3582241 . + . ID=gene-IXO1104_RS16485;Name=IXO1104_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16485;old_locus_tag=IXO1104_16470 NZ_CP047492.1 Protein Homology CDS 3581441 3582241 . + 0 ID=cds-WP_011409062.1;Parent=gene-IXO1104_RS16485;Dbxref=Genbank:WP_011409062.1;Name=WP_011409062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570965.1;locus_tag=IXO1104_RS16485;product=SDR family oxidoreductase;protein_id=WP_011409062.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3582433 3582509 . + . ID=gene-IXO1104_RS16490;Name=IXO1104_RS16490;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS16490;old_locus_tag=IXO1104_16475 NZ_CP047492.1 cmsearch ncRNA 3582433 3582509 . + . ID=rna-IXO1104_RS16490;Parent=gene-IXO1104_RS16490;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16490;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3582433 3582509 . + . ID=exon-IXO1104_RS16490-1;Parent=rna-IXO1104_RS16490;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16490;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3582592 3583020 . - . ID=gene-IXO1104_RS16495;Name=IXO1104_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16495;old_locus_tag=IXO1104_16480 NZ_CP047492.1 Protein Homology CDS 3582592 3583020 . - 0 ID=cds-WP_011409063.1;Parent=gene-IXO1104_RS16495;Dbxref=Genbank:WP_011409063.1;Name=WP_011409063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810241.1;locus_tag=IXO1104_RS16495;product=group 1 truncated hemoglobin;protein_id=WP_011409063.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3583020 3583118 . - . ID=gene-IXO1104_RS16500;Name=IXO1104_RS16500;end_range=3583118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16500;old_locus_tag=IXO1104_16485;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3583020 3583118 . - 0 ID=cds-IXO1104_RS16500;Parent=gene-IXO1104_RS16500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3583118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156087.1;locus_tag=IXO1104_RS16500;partial=true;product=DUF3034 family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3583185 3583948 . - . ID=gene-IXO1104_RS16505;Name=IXO1104_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16505;old_locus_tag=IXO1104_16490 NZ_CP047492.1 Protein Homology CDS 3583633 3583948 . - 0 ID=cds-WP_094187736.1-5;Parent=gene-IXO1104_RS16505;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS16505;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3583185 3583633 . - 2 ID=cds-WP_094187736.1-5;Parent=gene-IXO1104_RS16505;Dbxref=Genbank:WP_094187736.1;Name=WP_094187736.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS16505;product=IS5 family transposase;protein_id=WP_094187736.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3584106 3584892 . + . ID=gene-IXO1104_RS16510;Name=IXO1104_RS16510;end_range=3584892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16510;old_locus_tag=IXO1104_16495;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3584106 3584892 . + 0 ID=cds-IXO1104_RS16510;Parent=gene-IXO1104_RS16510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3584892,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1;locus_tag=IXO1104_RS16510;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3584972 3587338 . - . ID=gene-IXO1104_RS16515;Name=IXO1104_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16515;old_locus_tag=IXO1104_16500 NZ_CP047492.1 Protein Homology CDS 3584972 3587338 . - 0 ID=cds-WP_011259756.1;Parent=gene-IXO1104_RS16515;Dbxref=Genbank:WP_011259756.1;Name=WP_011259756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973623.1;locus_tag=IXO1104_RS16515;product=EAL domain-containing protein;protein_id=WP_011259756.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3587335 3588009 . - . ID=gene-IXO1104_RS16520;Name=IXO1104_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16520;old_locus_tag=IXO1104_16505 NZ_CP047492.1 Protein Homology CDS 3587335 3588009 . - 0 ID=cds-WP_011409066.1;Parent=gene-IXO1104_RS16520;Dbxref=Genbank:WP_011409066.1;Name=WP_011409066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485525.1;locus_tag=IXO1104_RS16520;product=hypothetical protein;protein_id=WP_011409066.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3588219 3589157 . - . ID=gene-IXO1104_RS16525;Name=IXO1104_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16525;old_locus_tag=IXO1104_16510 NZ_CP047492.1 Protein Homology CDS 3588219 3589157 . - 0 ID=cds-WP_011259758.1;Parent=gene-IXO1104_RS16525;Dbxref=Genbank:WP_011259758.1;Name=WP_011259758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485523.1;locus_tag=IXO1104_RS16525;product=isopenicillin N synthase family oxygenase;protein_id=WP_011259758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3589280 3590629 . - . ID=gene-IXO1104_RS16530;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=IXO1104_RS16530;old_locus_tag=IXO1104_16515 NZ_CP047492.1 Protein Homology CDS 3589280 3590629 . - 0 ID=cds-WP_011259759.1;Parent=gene-IXO1104_RS16530;Dbxref=Genbank:WP_011259759.1;Name=WP_011259759.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300396.1;locus_tag=IXO1104_RS16530;product=phosphoglucosamine mutase;protein_id=WP_011259759.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3590626 3591513 . - . ID=gene-IXO1104_RS16535;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=IXO1104_RS16535;old_locus_tag=IXO1104_16520 NZ_CP047492.1 Protein Homology CDS 3590626 3591513 . - 0 ID=cds-WP_011259760.1;Parent=gene-IXO1104_RS16535;Dbxref=Genbank:WP_011259760.1;Name=WP_011259760.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366658.1;locus_tag=IXO1104_RS16535;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_011259760.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3591833 3592639 . - . ID=gene-IXO1104_RS16540;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS16540;old_locus_tag=IXO1104_16525 NZ_CP047492.1 Protein Homology CDS 3591833 3592639 . - 0 ID=cds-WP_012445542.1;Parent=gene-IXO1104_RS16540;Dbxref=Genbank:WP_012445542.1;Name=WP_012445542.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503808.1;locus_tag=IXO1104_RS16540;product=tryptophan synthase subunit alpha;protein_id=WP_012445542.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3592688 3593040 . - . ID=gene-IXO1104_RS16545;Name=IXO1104_RS16545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16545;old_locus_tag=IXO1104_16530;pseudo=true NZ_CP047492.1 Protein Homology CDS 3592688 3593040 . - 0 ID=cds-IXO1104_RS16545;Parent=gene-IXO1104_RS16545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570955.1;locus_tag=IXO1104_RS16545;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3593085 3594302 . - . ID=gene-IXO1104_RS16550;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS16550;old_locus_tag=IXO1104_16535 NZ_CP047492.1 Protein Homology CDS 3593085 3594302 . - 0 ID=cds-WP_012445544.1;Parent=gene-IXO1104_RS16550;Dbxref=Genbank:WP_012445544.1;Name=WP_012445544.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914297.1;locus_tag=IXO1104_RS16550;product=tryptophan synthase subunit beta;protein_id=WP_012445544.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3594408 3595376 . + . ID=gene-IXO1104_RS16555;Name=IXO1104_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16555;old_locus_tag=IXO1104_16540 NZ_CP047492.1 Protein Homology CDS 3594408 3595376 . + 0 ID=cds-WP_033013162.1;Parent=gene-IXO1104_RS16555;Dbxref=Genbank:WP_033013162.1;Name=WP_033013162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409068.1;locus_tag=IXO1104_RS16555;product=LysR family transcriptional regulator;protein_id=WP_033013162.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3595712 3596380 . - . ID=gene-IXO1104_RS16560;Name=IXO1104_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16560;old_locus_tag=IXO1104_16545 NZ_CP047492.1 Protein Homology CDS 3595712 3596380 . - 0 ID=cds-WP_011259764.1;Parent=gene-IXO1104_RS16560;Dbxref=Genbank:WP_011259764.1;Name=WP_011259764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159966.1;locus_tag=IXO1104_RS16560;product=phosphoribosylanthranilate isomerase;protein_id=WP_011259764.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3596377 3597150 . - . ID=gene-IXO1104_RS16565;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=IXO1104_RS16565;old_locus_tag=IXO1104_16550 NZ_CP047492.1 Protein Homology CDS 3596377 3597150 . - 0 ID=cds-WP_075240411.1;Parent=gene-IXO1104_RS16565;Dbxref=Genbank:WP_075240411.1;Name=WP_075240411.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304909.1;locus_tag=IXO1104_RS16565;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_075240411.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3597320 3597727 . - . ID=gene-IXO1104_RS16570;Name=IXO1104_RS16570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16570;old_locus_tag=IXO1104_16555;pseudo=true NZ_CP047492.1 Protein Homology CDS 3597320 3597727 . - 0 ID=cds-IXO1104_RS16570;Parent=gene-IXO1104_RS16570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379378.1;locus_tag=IXO1104_RS16570;product=VOC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3597724 3599676 . - . ID=gene-IXO1104_RS16575;Name=IXO1104_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16575;old_locus_tag=IXO1104_16560 NZ_CP047492.1 Protein Homology CDS 3597724 3599676 . - 0 ID=cds-WP_075240410.1;Parent=gene-IXO1104_RS16575;Dbxref=Genbank:WP_075240410.1;Name=WP_075240410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113385.1;locus_tag=IXO1104_RS16575;product=ferrous iron transporter B;protein_id=WP_075240410.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3600223 3600298 . - . ID=gene-IXO1104_RS16580;Name=IXO1104_RS16580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS16580;old_locus_tag=IXO1104_16565 NZ_CP047492.1 cmsearch ncRNA 3600223 3600298 . - . ID=rna-IXO1104_RS16580;Parent=gene-IXO1104_RS16580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16580;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3600223 3600298 . - . ID=exon-IXO1104_RS16580-1;Parent=rna-IXO1104_RS16580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16580;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3600357 3601382 . - . ID=gene-IXO1104_RS16585;Name=IXO1104_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16585;old_locus_tag=IXO1104_16570 NZ_CP047492.1 Protein Homology CDS 3600357 3601382 . - 0 ID=cds-WP_011259769.1;Parent=gene-IXO1104_RS16585;Dbxref=Genbank:WP_011259769.1;Name=WP_011259769.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437949.1;locus_tag=IXO1104_RS16585;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_011259769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3601467 3602540 . - . ID=gene-IXO1104_RS16590;Name=IXO1104_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16590;old_locus_tag=IXO1104_16575 NZ_CP047492.1 Protein Homology CDS 3601467 3602540 . - 0 ID=cds-WP_011409070.1;Parent=gene-IXO1104_RS16590;Dbxref=Genbank:WP_011409070.1;Name=WP_011409070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379384.1;locus_tag=IXO1104_RS16590;product=D-glycerate dehydrogenase;protein_id=WP_011409070.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3602533 3603636 . - . ID=gene-IXO1104_RS16595;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=IXO1104_RS16595;old_locus_tag=IXO1104_16580 NZ_CP047492.1 Protein Homology CDS 3602533 3603636 . - 0 ID=cds-WP_011259771.1;Parent=gene-IXO1104_RS16595;Dbxref=Genbank:WP_011259771.1;Name=WP_011259771.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914304.1;locus_tag=IXO1104_RS16595;product=chorismate synthase;protein_id=WP_011259771.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3603647 3604573 . - . ID=gene-IXO1104_RS16600;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS16600;old_locus_tag=IXO1104_16585 NZ_CP047492.1 Protein Homology CDS 3603647 3604573 . - 0 ID=cds-WP_011259772.1;Parent=gene-IXO1104_RS16600;Dbxref=Genbank:WP_011259772.1;Name=WP_011259772.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927455.1;locus_tag=IXO1104_RS16600;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_011259772.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3604654 3605304 . + . ID=gene-IXO1104_RS16605;Name=IXO1104_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16605;old_locus_tag=IXO1104_16590 NZ_CP047492.1 Protein Homology CDS 3604654 3605304 . + 0 ID=cds-WP_011259773.1;Parent=gene-IXO1104_RS16605;Dbxref=Genbank:WP_011259773.1;Name=WP_011259773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302734.1;locus_tag=IXO1104_RS16605;product=SCO family protein;protein_id=WP_011259773.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3605301 3606149 . + . ID=gene-IXO1104_RS16610;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=IXO1104_RS16610;old_locus_tag=IXO1104_16595 NZ_CP047492.1 Protein Homology CDS 3605301 3606149 . + 0 ID=cds-WP_027703264.1;Parent=gene-IXO1104_RS16610;Dbxref=Genbank:WP_027703264.1;Name=WP_027703264.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409071.1;locus_tag=IXO1104_RS16610;product=archaetidylserine decarboxylase;protein_id=WP_027703264.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3606218 3606293 . - . ID=gene-IXO1104_RS16615;Name=IXO1104_RS16615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS16615;old_locus_tag=IXO1104_16600 NZ_CP047492.1 cmsearch ncRNA 3606218 3606293 . - . ID=rna-IXO1104_RS16615;Parent=gene-IXO1104_RS16615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16615;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3606218 3606293 . - . ID=exon-IXO1104_RS16615-1;Parent=rna-IXO1104_RS16615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16615;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3606700 3608283 . - . ID=gene-IXO1104_RS16620;Name=IXO1104_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16620;old_locus_tag=IXO1104_16605 NZ_CP047492.1 Protein Homology CDS 3606700 3608283 . - 0 ID=cds-WP_041182211.1;Parent=gene-IXO1104_RS16620;Dbxref=Genbank:WP_041182211.1;Name=WP_041182211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914309.1;locus_tag=IXO1104_RS16620;product=transglycosylase SLT domain-containing protein;protein_id=WP_041182211.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3608578 3608901 . + . ID=gene-IXO1104_RS16625;Name=IXO1104_RS16625;end_range=3608901,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16625;old_locus_tag=IXO1104_16610;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3608578 3608901 . + 0 ID=cds-IXO1104_RS16625;Parent=gene-IXO1104_RS16625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3608901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347958.1;locus_tag=IXO1104_RS16625;partial=true;product=DUF853 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3608803 3609461 . - . ID=gene-IXO1104_RS16630;Name=IXO1104_RS16630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16630;old_locus_tag=IXO1104_16615;partial=true;pseudo=true;start_range=.,3608803 NZ_CP047492.1 Protein Homology CDS 3608803 3609461 . - 0 ID=cds-IXO1104_RS16630;Parent=gene-IXO1104_RS16630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS16630;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,3608803;transl_table=11 NZ_CP047492.1 RefSeq gene 3609494 3610345 . - . ID=gene-IXO1104_RS16635;Name=IXO1104_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16635;old_locus_tag=IXO1104_16620 NZ_CP047492.1 Protein Homology CDS 3609494 3610345 . - 0 ID=cds-WP_230455559.1;Parent=gene-IXO1104_RS16635;Dbxref=Genbank:WP_230455559.1;Name=WP_230455559.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS16635;product=IS30 family transposase;protein_id=WP_230455559.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3610435 3611162 . - . ID=gene-IXO1104_RS16640;Name=IXO1104_RS16640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16640;old_locus_tag=IXO1104_16625;partial=true;pseudo=true;start_range=.,3610435 NZ_CP047492.1 Protein Homology CDS 3610435 3611162 . - 0 ID=cds-IXO1104_RS16640;Parent=gene-IXO1104_RS16640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156366.1;locus_tag=IXO1104_RS16640;partial=true;product=rhomboid family intramembrane serine protease;pseudo=true;start_range=.,3610435;transl_table=11 NZ_CP047492.1 RefSeq gene 3611273 3611779 . + . ID=gene-IXO1104_RS16645;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=IXO1104_RS16645;old_locus_tag=IXO1104_16635 NZ_CP047492.1 Protein Homology CDS 3611273 3611779 . + 0 ID=cds-WP_011409076.1;Parent=gene-IXO1104_RS16645;Dbxref=Genbank:WP_011409076.1;Name=WP_011409076.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302059.1;locus_tag=IXO1104_RS16645;product=transcription elongation factor GreB;protein_id=WP_011409076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3611901 3613271 . - . ID=gene-IXO1104_RS16650;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=IXO1104_RS16650;old_locus_tag=IXO1104_16640 NZ_CP047492.1 Protein Homology CDS 3611901 3613271 . - 0 ID=cds-WP_075240636.1;Parent=gene-IXO1104_RS16650;Dbxref=Genbank:WP_075240636.1;Name=WP_075240636.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037694.1;locus_tag=IXO1104_RS16650;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_075240636.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3613288 3614991 . + . ID=gene-IXO1104_RS16655;Name=IXO1104_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16655;old_locus_tag=IXO1104_16645 NZ_CP047492.1 Protein Homology CDS 3613288 3614991 . + 0 ID=cds-WP_178385216.1;Parent=gene-IXO1104_RS16655;Dbxref=Genbank:WP_178385216.1;Name=WP_178385216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927430.1;locus_tag=IXO1104_RS16655;product=recombinase family protein;protein_id=WP_178385216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3615337 3615744 . + . ID=gene-IXO1104_RS16660;Name=IXO1104_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16660;old_locus_tag=IXO1104_16655 NZ_CP047492.1 GeneMarkS-2+ CDS 3615337 3615744 . + 0 ID=cds-WP_241846811.1;Parent=gene-IXO1104_RS16660;Dbxref=Genbank:WP_241846811.1;Name=WP_241846811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS16660;product=hypothetical protein;protein_id=WP_241846811.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3615859 3616827 . - . ID=gene-IXO1104_RS16665;Name=IXO1104_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16665;old_locus_tag=IXO1104_16660 NZ_CP047492.1 Protein Homology CDS 3615859 3616827 . - 0 ID=cds-WP_058419161.1;Parent=gene-IXO1104_RS16665;Dbxref=Genbank:WP_058419161.1;Name=WP_058419161.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS16665;product=IS5 family transposase;protein_id=WP_058419161.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3617008 3618783 . + . ID=gene-IXO1104_RS16670;Name=IXO1104_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16670;old_locus_tag=IXO1104_16665 NZ_CP047492.1 Protein Homology CDS 3617008 3618783 . + 0 ID=cds-WP_241846812.1;Parent=gene-IXO1104_RS16670;Dbxref=Genbank:WP_241846812.1;Name=WP_241846812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116238.1;locus_tag=IXO1104_RS16670;product=DUF262 domain-containing protein;protein_id=WP_241846812.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3618903 3619178 . - . ID=gene-IXO1104_RS16675;Name=IXO1104_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16675;old_locus_tag=IXO1104_16670 NZ_CP047492.1 Protein Homology CDS 3618903 3619178 . - 0 ID=cds-WP_075240457.1;Parent=gene-IXO1104_RS16675;Dbxref=Genbank:WP_075240457.1;Name=WP_075240457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116239.1;locus_tag=IXO1104_RS16675;product=hypothetical protein;protein_id=WP_075240457.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3619175 3619447 . - . ID=gene-IXO1104_RS16680;Name=IXO1104_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16680 NZ_CP047492.1 Protein Homology CDS 3619175 3619447 . - 0 ID=cds-WP_075240456.1;Parent=gene-IXO1104_RS16680;Dbxref=Genbank:WP_075240456.1;Name=WP_075240456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408131.1;locus_tag=IXO1104_RS16680;product=hypothetical protein;protein_id=WP_075240456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3619444 3619668 . - . ID=gene-IXO1104_RS16685;Name=IXO1104_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16685;old_locus_tag=IXO1104_16675 NZ_CP047492.1 Protein Homology CDS 3619444 3619668 . - 0 ID=cds-WP_075240455.1;Parent=gene-IXO1104_RS16685;Dbxref=Genbank:WP_075240455.1;Name=WP_075240455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091205.1;locus_tag=IXO1104_RS16685;product=hypothetical protein;protein_id=WP_075240455.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3619665 3619937 . - . ID=gene-IXO1104_RS16690;Name=IXO1104_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16690;old_locus_tag=IXO1104_16680 NZ_CP047492.1 Protein Homology CDS 3619665 3619937 . - 0 ID=cds-WP_075240454.1;Parent=gene-IXO1104_RS16690;Dbxref=Genbank:WP_075240454.1;Name=WP_075240454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572785.1;locus_tag=IXO1104_RS16690;product=hypothetical protein;protein_id=WP_075240454.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3619930 3620106 . - . ID=gene-IXO1104_RS16695;Name=IXO1104_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16695 NZ_CP047492.1 Protein Homology CDS 3619930 3620106 . - 0 ID=cds-WP_017116242.1;Parent=gene-IXO1104_RS16695;Dbxref=Genbank:WP_017116242.1;Name=WP_017116242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922230.1;locus_tag=IXO1104_RS16695;product=hypothetical protein;protein_id=WP_017116242.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3620099 3620509 . - . ID=gene-IXO1104_RS16700;Name=IXO1104_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16700;old_locus_tag=IXO1104_16685 NZ_CP047492.1 Protein Homology CDS 3620099 3620509 . - 0 ID=cds-WP_010364106.1;Parent=gene-IXO1104_RS16700;Dbxref=Genbank:WP_010364106.1;Name=WP_010364106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038122.1;locus_tag=IXO1104_RS16700;product=hypothetical protein;protein_id=WP_010364106.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3620735 3621013 . - . ID=gene-IXO1104_RS16705;Name=IXO1104_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16705;old_locus_tag=IXO1104_16690 NZ_CP047492.1 Protein Homology CDS 3620735 3621013 . - 0 ID=cds-WP_011258448.1;Parent=gene-IXO1104_RS16705;Dbxref=Genbank:WP_011258448.1;Name=WP_011258448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922224.1;locus_tag=IXO1104_RS16705;product=hypothetical protein;protein_id=WP_011258448.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3621010 3621228 . - . ID=gene-IXO1104_RS16710;Name=IXO1104_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16710;old_locus_tag=IXO1104_16695 NZ_CP047492.1 Protein Homology CDS 3621010 3621228 . - 0 ID=cds-WP_011408133.1;Parent=gene-IXO1104_RS16710;Dbxref=Genbank:WP_011408133.1;Name=WP_011408133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922222.1;locus_tag=IXO1104_RS16710;product=hypothetical protein;protein_id=WP_011408133.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3621537 3624233 . - . ID=gene-IXO1104_RS16715;Name=IXO1104_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16715;old_locus_tag=IXO1104_16700 NZ_CP047492.1 Protein Homology CDS 3621537 3624233 . - 0 ID=cds-WP_011408134.1;Parent=gene-IXO1104_RS16715;Dbxref=Genbank:WP_011408134.1;Name=WP_011408134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258449.1;locus_tag=IXO1104_RS16715;product=toprim domain-containing protein;protein_id=WP_011408134.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3624243 3624455 . - . ID=gene-IXO1104_RS16720;Name=IXO1104_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16720;old_locus_tag=IXO1104_16705 NZ_CP047492.1 Protein Homology CDS 3624243 3624455 . - 0 ID=cds-WP_011258450.1;Parent=gene-IXO1104_RS16720;Dbxref=Genbank:WP_011258450.1;Name=WP_011258450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364092.1;locus_tag=IXO1104_RS16720;product=hypothetical protein;protein_id=WP_011258450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3624452 3624730 . - . ID=gene-IXO1104_RS16725;Name=IXO1104_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16725;old_locus_tag=IXO1104_16710 NZ_CP047492.1 Protein Homology CDS 3624452 3624730 . - 0 ID=cds-WP_011408135.1;Parent=gene-IXO1104_RS16725;Dbxref=Genbank:WP_011408135.1;Name=WP_011408135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851009.1;locus_tag=IXO1104_RS16725;product=hypothetical protein;protein_id=WP_011408135.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3624741 3625061 . - . ID=gene-IXO1104_RS16730;Name=IXO1104_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16730;old_locus_tag=IXO1104_16715 NZ_CP047492.1 Protein Homology CDS 3624741 3625061 . - 0 ID=cds-WP_011408136.1;Parent=gene-IXO1104_RS16730;Dbxref=Genbank:WP_011408136.1;Name=WP_011408136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572766.1;locus_tag=IXO1104_RS16730;product=ogr/Delta-like zinc finger family protein;protein_id=WP_011408136.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3625064 3625303 . - . ID=gene-IXO1104_RS16735;Name=IXO1104_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16735;old_locus_tag=IXO1104_16720 NZ_CP047492.1 Protein Homology CDS 3625064 3625303 . - 0 ID=cds-WP_228329739.1;Parent=gene-IXO1104_RS16735;Dbxref=Genbank:WP_228329739.1;Name=WP_228329739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=IXO1104_RS16735;product=DNA-binding protein;protein_id=WP_228329739.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3625393 3625830 . + . ID=gene-IXO1104_RS16740;Name=IXO1104_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16740;old_locus_tag=IXO1104_16725 NZ_CP047492.1 Protein Homology CDS 3625393 3625830 . + 0 ID=cds-WP_011258452.1;Parent=gene-IXO1104_RS16740;Dbxref=Genbank:WP_011258452.1;Name=WP_011258452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258452.1;locus_tag=IXO1104_RS16740;product=helix-turn-helix domain-containing protein;protein_id=WP_011258452.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3626491 3627477 . - . ID=gene-IXO1104_RS16745;Name=IXO1104_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16745;old_locus_tag=IXO1104_16730 NZ_CP047492.1 Protein Homology CDS 3626491 3627477 . - 0 ID=cds-WP_011258453.1;Parent=gene-IXO1104_RS16745;Dbxref=Genbank:WP_011258453.1;Name=WP_011258453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258453.1;locus_tag=IXO1104_RS16745;product=phage late control D family protein;protein_id=WP_011258453.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3627474 3627875 . - . ID=gene-IXO1104_RS16750;Name=IXO1104_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16750;old_locus_tag=IXO1104_16735 NZ_CP047492.1 Protein Homology CDS 3627474 3627875 . - 0 ID=cds-WP_011258454.1;Parent=gene-IXO1104_RS16750;Dbxref=Genbank:WP_011258454.1;Name=WP_011258454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258454.1;locus_tag=IXO1104_RS16750;product=phage tail protein;protein_id=WP_011258454.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3627888 3630758 . - . ID=gene-IXO1104_RS16755;Name=IXO1104_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16755;old_locus_tag=IXO1104_16740 NZ_CP047492.1 Protein Homology CDS 3627888 3630758 . - 0 ID=cds-WP_011258455.1;Parent=gene-IXO1104_RS16755;Dbxref=Genbank:WP_011258455.1;Name=WP_011258455.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167608.1;locus_tag=IXO1104_RS16755;product=phage tail tape measure protein;protein_id=WP_011258455.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3630791 3630904 . - . ID=gene-IXO1104_RS16760;Name=IXO1104_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16760;old_locus_tag=IXO1104_16745 NZ_CP047492.1 Protein Homology CDS 3630791 3630904 . - 0 ID=cds-WP_011258456.1;Parent=gene-IXO1104_RS16760;Dbxref=Genbank:WP_011258456.1;Name=WP_011258456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118941.1;locus_tag=IXO1104_RS16760;product=GpE family phage tail protein;protein_id=WP_011258456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3630913 3631215 . - . ID=gene-IXO1104_RS16765;Name=IXO1104_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16765;old_locus_tag=IXO1104_16750 NZ_CP047492.1 Protein Homology CDS 3630913 3631215 . - 0 ID=cds-WP_011258457.1;Parent=gene-IXO1104_RS16765;Dbxref=Genbank:WP_011258457.1;Name=WP_011258457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851112.1;locus_tag=IXO1104_RS16765;product=phage tail assembly protein;protein_id=WP_011258457.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3631261 3631770 . - . ID=gene-IXO1104_RS16770;Name=IXO1104_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16770;old_locus_tag=IXO1104_16755 NZ_CP047492.1 Protein Homology CDS 3631261 3631770 . - 0 ID=cds-WP_011258458.1;Parent=gene-IXO1104_RS16770;Dbxref=Genbank:WP_011258458.1;Name=WP_011258458.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038108.1;locus_tag=IXO1104_RS16770;product=phage major tail tube protein;protein_id=WP_011258458.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3631801 3632967 . - . ID=gene-IXO1104_RS16775;Name=IXO1104_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16775;old_locus_tag=IXO1104_16760 NZ_CP047492.1 Protein Homology CDS 3631801 3632967 . - 0 ID=cds-WP_075240453.1;Parent=gene-IXO1104_RS16775;Dbxref=Genbank:WP_075240453.1;Name=WP_075240453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450506.1;locus_tag=IXO1104_RS16775;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_075240453.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3632979 3633338 . - . ID=gene-IXO1104_RS16780;Name=IXO1104_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16780;old_locus_tag=IXO1104_16765 NZ_CP047492.1 Protein Homology CDS 3632979 3633338 . - 0 ID=cds-WP_075240452.1;Parent=gene-IXO1104_RS16780;Dbxref=Genbank:WP_075240452.1;Name=WP_075240452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809191.1;locus_tag=IXO1104_RS16780;product=GPW/gp25 family protein;protein_id=WP_075240452.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3633335 3633898 . - . ID=gene-IXO1104_RS16785;Name=IXO1104_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16785;old_locus_tag=IXO1104_16770 NZ_CP047492.1 Protein Homology CDS 3633335 3633898 . - 0 ID=cds-WP_075240451.1;Parent=gene-IXO1104_RS16785;Dbxref=Genbank:WP_075240451.1;Name=WP_075240451.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809189.1;locus_tag=IXO1104_RS16785;product=phage baseplate assembly protein V;protein_id=WP_075240451.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3633959 3634537 . - . ID=gene-IXO1104_RS16790;Name=IXO1104_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16790;old_locus_tag=IXO1104_16775 NZ_CP047492.1 Protein Homology CDS 3633959 3634537 . - 0 ID=cds-WP_075240450.1;Parent=gene-IXO1104_RS16790;Dbxref=Genbank:WP_075240450.1;Name=WP_075240450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364050.1;locus_tag=IXO1104_RS16790;product=phage tail protein;protein_id=WP_075240450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3634547 3636052 . - . ID=gene-IXO1104_RS16795;Name=IXO1104_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16795;old_locus_tag=IXO1104_16780 NZ_CP047492.1 Protein Homology CDS 3634547 3636052 . - 0 ID=cds-WP_075240449.1;Parent=gene-IXO1104_RS16795;Dbxref=Genbank:WP_075240449.1;Name=WP_075240449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364048.1;locus_tag=IXO1104_RS16795;product=phage tail protein;protein_id=WP_075240449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3636062 3636607 . - . ID=gene-IXO1104_RS16800;Name=IXO1104_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16800;old_locus_tag=IXO1104_16785 NZ_CP047492.1 Protein Homology CDS 3636062 3636607 . - 0 ID=cds-WP_075240448.1;Parent=gene-IXO1104_RS16800;Dbxref=Genbank:WP_075240448.1;Name=WP_075240448.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118949.1;locus_tag=IXO1104_RS16800;product=phage tail protein I;protein_id=WP_075240448.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3636600 3637490 . - . ID=gene-IXO1104_RS16805;Name=IXO1104_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16805;old_locus_tag=IXO1104_16790 NZ_CP047492.1 Protein Homology CDS 3636600 3637490 . - 0 ID=cds-WP_075240447.1;Parent=gene-IXO1104_RS16805;Dbxref=Genbank:WP_075240447.1;Name=WP_075240447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904173.1;locus_tag=IXO1104_RS16805;product=baseplate J/gp47 family protein;protein_id=WP_075240447.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3637767 3638399 . - . ID=gene-IXO1104_RS16810;Name=IXO1104_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16810;old_locus_tag=IXO1104_16795 NZ_CP047492.1 Protein Homology CDS 3637767 3638399 . - 0 ID=cds-WP_143700599.1;Parent=gene-IXO1104_RS16810;Dbxref=Genbank:WP_143700599.1;Name=WP_143700599.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021180.2;locus_tag=IXO1104_RS16810;product=DUF2026 family protein;protein_id=WP_143700599.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3638675 3639121 . - . ID=gene-IXO1104_RS16815;Name=IXO1104_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16815;old_locus_tag=IXO1104_16800 NZ_CP047492.1 Protein Homology CDS 3638675 3639121 . - 0 ID=cds-WP_075240753.1;Parent=gene-IXO1104_RS16815;Dbxref=Genbank:WP_075240753.1;Name=WP_075240753.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348765.1;locus_tag=IXO1104_RS16815;product=phage virion morphogenesis protein;protein_id=WP_075240753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3639109 3639528 . - . ID=gene-IXO1104_RS16820;Name=IXO1104_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16820;old_locus_tag=IXO1104_16805 NZ_CP047492.1 Protein Homology CDS 3639109 3639528 . - 0 ID=cds-WP_075240752.1;Parent=gene-IXO1104_RS16820;Dbxref=Genbank:WP_075240752.1;Name=WP_075240752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445490.1;locus_tag=IXO1104_RS16820;product=phage tail protein;protein_id=WP_075240752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3639525 3640013 . - . ID=gene-IXO1104_RS16825;Name=IXO1104_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16825;old_locus_tag=IXO1104_16810 NZ_CP047492.1 Protein Homology CDS 3639525 3640013 . - 0 ID=cds-WP_011258469.1;Parent=gene-IXO1104_RS16825;Dbxref=Genbank:WP_011258469.1;Name=WP_011258469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118585.1;locus_tag=IXO1104_RS16825;product=hypothetical protein;protein_id=WP_011258469.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3640013 3640651 . - . ID=gene-IXO1104_RS16830;Name=IXO1104_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16830;old_locus_tag=IXO1104_16815 NZ_CP047492.1 Protein Homology CDS 3640013 3640651 . - 0 ID=cds-WP_011408146.1-2;Parent=gene-IXO1104_RS16830;Dbxref=Genbank:WP_011408146.1;Name=WP_011408146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572719.1;locus_tag=IXO1104_RS16830;product=glycoside hydrolase family 19 protein;protein_id=WP_011408146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3640651 3640926 . - . ID=gene-IXO1104_RS16835;Name=IXO1104_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16835;old_locus_tag=IXO1104_16820 NZ_CP047492.1 Protein Homology CDS 3640651 3640926 . - 0 ID=cds-WP_024745970.1;Parent=gene-IXO1104_RS16835;Dbxref=Genbank:WP_024745970.1;Name=WP_024745970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167622.1;locus_tag=IXO1104_RS16835;product=phage holin family protein;protein_id=WP_024745970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3640919 3641275 . - . ID=gene-IXO1104_RS16840;Name=IXO1104_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16840;old_locus_tag=IXO1104_16825 NZ_CP047492.1 Protein Homology CDS 3640919 3641275 . - 0 ID=cds-WP_048484874.1;Parent=gene-IXO1104_RS16840;Dbxref=Genbank:WP_048484874.1;Name=WP_048484874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929454.1;locus_tag=IXO1104_RS16840;product=phage holin family protein;protein_id=WP_048484874.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3641280 3641489 . - . ID=gene-IXO1104_RS16845;Name=IXO1104_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16845;old_locus_tag=IXO1104_16830 NZ_CP047492.1 Protein Homology CDS 3641280 3641489 . - 0 ID=cds-WP_048484873.1-2;Parent=gene-IXO1104_RS16845;Dbxref=Genbank:WP_048484873.1;Name=WP_048484873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868168.1;locus_tag=IXO1104_RS16845;product=tail protein X;protein_id=WP_048484873.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3641489 3641956 . - . ID=gene-IXO1104_RS16850;Name=IXO1104_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16850;old_locus_tag=IXO1104_16835 NZ_CP047492.1 Protein Homology CDS 3641489 3641956 . - 0 ID=cds-WP_012445486.1-2;Parent=gene-IXO1104_RS16850;Dbxref=Genbank:WP_012445486.1;Name=WP_012445486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809166.1;locus_tag=IXO1104_RS16850;product=head completion/stabilization protein;protein_id=WP_012445486.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3642056 3642775 . - . ID=gene-IXO1104_RS16855;Name=IXO1104_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16855;old_locus_tag=IXO1104_16840 NZ_CP047492.1 Protein Homology CDS 3642056 3642775 . - 0 ID=cds-WP_048484871.1-2;Parent=gene-IXO1104_RS16855;Dbxref=Genbank:WP_048484871.1;Name=WP_048484871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364022.1;locus_tag=IXO1104_RS16855;product=terminase endonuclease subunit;protein_id=WP_048484871.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3642779 3643795 . - . ID=gene-IXO1104_RS16860;Name=IXO1104_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16860;old_locus_tag=IXO1104_16845 NZ_CP047492.1 Protein Homology CDS 3642779 3643795 . - 0 ID=cds-WP_048484870.1;Parent=gene-IXO1104_RS16860;Dbxref=Genbank:WP_048484870.1;Name=WP_048484870.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809141.1;locus_tag=IXO1104_RS16860;product=phage major capsid protein%2C P2 family;protein_id=WP_048484870.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3643842 3644684 . - . ID=gene-IXO1104_RS16865;Name=IXO1104_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16865;old_locus_tag=IXO1104_16850 NZ_CP047492.1 Protein Homology CDS 3643842 3644684 . - 0 ID=cds-WP_075245002.1-2;Parent=gene-IXO1104_RS16865;Dbxref=Genbank:WP_075245002.1;Name=WP_075245002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809139.1;locus_tag=IXO1104_RS16865;product=GPO family capsid scaffolding protein;protein_id=WP_075245002.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3644827 3646590 . + . ID=gene-IXO1104_RS16870;Name=IXO1104_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16870;old_locus_tag=IXO1104_16855 NZ_CP047492.1 Protein Homology CDS 3644827 3646590 . + 0 ID=cds-WP_178385302.1;Parent=gene-IXO1104_RS16870;Dbxref=Genbank:WP_178385302.1;Name=WP_178385302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929437.1;locus_tag=IXO1104_RS16870;product=terminase ATPase subunit family protein;protein_id=WP_178385302.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3646590 3647612 . + . ID=gene-IXO1104_RS16875;Name=IXO1104_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16875;old_locus_tag=IXO1104_16860 NZ_CP047492.1 Protein Homology CDS 3646590 3647612 . + 0 ID=cds-WP_075244554.1-2;Parent=gene-IXO1104_RS16875;Dbxref=Genbank:WP_075244554.1;Name=WP_075244554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408154.1;locus_tag=IXO1104_RS16875;product=phage portal protein;protein_id=WP_075244554.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3647581 3647787 . - . ID=gene-IXO1104_RS16880;Name=IXO1104_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16880 NZ_CP047492.1 Protein Homology CDS 3647581 3647787 . - 0 ID=cds-WP_228329740.1-2;Parent=gene-IXO1104_RS16880;Dbxref=Genbank:WP_228329740.1;Name=WP_228329740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171515.1;locus_tag=IXO1104_RS16880;product=hypothetical protein;protein_id=WP_228329740.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3647698 3647883 . + . ID=gene-IXO1104_RS16885;Name=IXO1104_RS16885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16885;old_locus_tag=IXO1104_16865;partial=true;pseudo=true;start_range=.,3647698 NZ_CP047492.1 Protein Homology CDS 3647698 3647883 . + 0 ID=cds-IXO1104_RS16885;Parent=gene-IXO1104_RS16885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=IXO1104_RS16885;partial=true;product=Com family DNA-binding transcriptional regulator;pseudo=true;start_range=.,3647698;transl_table=11 NZ_CP047492.1 RefSeq gene 3647801 3648511 . + . ID=gene-IXO1104_RS16890;Name=IXO1104_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16890;old_locus_tag=IXO1104_16870 NZ_CP047492.1 Protein Homology CDS 3647801 3648511 . + 0 ID=cds-WP_075246299.1;Parent=gene-IXO1104_RS16890;Dbxref=Genbank:WP_075246299.1;Name=WP_075246299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=IXO1104_RS16890;product=site-specific DNA-methyltransferase;protein_id=WP_075246299.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3648586 3649338 . - . ID=gene-IXO1104_RS16895;Name=IXO1104_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16895;old_locus_tag=IXO1104_16875 NZ_CP047492.1 Protein Homology CDS 3648586 3649338 . - 0 ID=cds-WP_075240685.1;Parent=gene-IXO1104_RS16895;Dbxref=Genbank:WP_075240685.1;Name=WP_075240685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026917.2;locus_tag=IXO1104_RS16895;product=Imm52 family immunity protein;protein_id=WP_075240685.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3649335 3650042 . - . ID=gene-IXO1104_RS16900;Name=IXO1104_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16900;old_locus_tag=IXO1104_16880 NZ_CP047492.1 Protein Homology CDS 3649335 3650042 . - 0 ID=cds-WP_075240684.1;Parent=gene-IXO1104_RS16900;Dbxref=Genbank:WP_075240684.1;Name=WP_075240684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409848.1;locus_tag=IXO1104_RS16900;product=Tox-REase-5 domain-containing protein;protein_id=WP_075240684.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3650056 3650397 . - . ID=gene-IXO1104_RS16905;Name=IXO1104_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16905;old_locus_tag=IXO1104_16885 NZ_CP047492.1 Protein Homology CDS 3650056 3650397 . - 0 ID=cds-WP_011408158.1;Parent=gene-IXO1104_RS16905;Dbxref=Genbank:WP_011408158.1;Name=WP_011408158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1104_RS16905;product=hypothetical protein;protein_id=WP_011408158.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3650378 3650887 . - . ID=gene-IXO1104_RS16910;Name=IXO1104_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16910;old_locus_tag=IXO1104_16890 NZ_CP047492.1 Protein Homology CDS 3650378 3650887 . - 0 ID=cds-WP_075245050.1;Parent=gene-IXO1104_RS16910;Dbxref=Genbank:WP_075245050.1;Name=WP_075245050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260874.1;locus_tag=IXO1104_RS16910;product=DUF4123 domain-containing protein;protein_id=WP_075245050.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3650884 3651294 . - . ID=gene-IXO1104_RS16915;Name=IXO1104_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16915;old_locus_tag=IXO1104_16895 NZ_CP047492.1 Protein Homology CDS 3650884 3651294 . - 0 ID=cds-WP_048484867.1;Parent=gene-IXO1104_RS16915;Dbxref=Genbank:WP_048484867.1;Name=WP_048484867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=IXO1104_RS16915;product=PAAR domain-containing protein;protein_id=WP_048484867.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3652249 3652407 . - . ID=gene-IXO1104_RS16920;Name=IXO1104_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16920 NZ_CP047492.1 Protein Homology CDS 3652249 3652407 . - 0 ID=cds-WP_235429129.1;Parent=gene-IXO1104_RS16920;Dbxref=Genbank:WP_235429129.1;Name=WP_235429129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024830.2;locus_tag=IXO1104_RS16920;product=DUF4113 domain-containing protein;protein_id=WP_235429129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3652479 3652733 . - . ID=gene-IXO1104_RS16925;Name=IXO1104_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16925 NZ_CP047492.1 Protein Homology CDS 3652479 3652733 . - 0 ID=cds-WP_241846813.1;Parent=gene-IXO1104_RS16925;Dbxref=Genbank:WP_241846813.1;Name=WP_241846813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023227.2;locus_tag=IXO1104_RS16925;product=hypothetical protein;protein_id=WP_241846813.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3653215 3654183 . + . ID=gene-IXO1104_RS16930;Name=IXO1104_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16930;old_locus_tag=IXO1104_16905 NZ_CP047492.1 Protein Homology CDS 3653215 3654183 . + 0 ID=cds-WP_058419161.1-2;Parent=gene-IXO1104_RS16930;Dbxref=Genbank:WP_058419161.1;Name=WP_058419161.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS16930;product=IS5 family transposase;protein_id=WP_058419161.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3654670 3654745 . - . ID=gene-IXO1104_RS16935;Name=IXO1104_RS16935;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS16935;old_locus_tag=IXO1104_16910 NZ_CP047492.1 cmsearch ncRNA 3654670 3654745 . - . ID=rna-IXO1104_RS16935;Parent=gene-IXO1104_RS16935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16935;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3654670 3654745 . - . ID=exon-IXO1104_RS16935-1;Parent=rna-IXO1104_RS16935;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS16935;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 3655093 3655754 . + . ID=gene-IXO1104_RS16940;Name=IXO1104_RS16940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16940;old_locus_tag=IXO1104_16915;pseudo=true NZ_CP047492.1 Protein Homology CDS 3655093 3655754 . + 0 ID=cds-IXO1104_RS16940;Parent=gene-IXO1104_RS16940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302061.1;locus_tag=IXO1104_RS16940;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3655751 3656185 . + . ID=gene-IXO1104_RS16945;Name=IXO1104_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16945;old_locus_tag=IXO1104_16920 NZ_CP047492.1 Protein Homology CDS 3655751 3656185 . + 0 ID=cds-WP_011409078.1;Parent=gene-IXO1104_RS16945;Dbxref=Genbank:WP_011409078.1;Name=WP_011409078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503835.1;locus_tag=IXO1104_RS16945;product=HIT family protein;protein_id=WP_011409078.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3656213 3656380 . + . ID=gene-IXO1104_RS16950;Name=IXO1104_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16950;old_locus_tag=IXO1104_16925 NZ_CP047492.1 Protein Homology CDS 3656213 3656380 . + 0 ID=cds-WP_011259782.1;Parent=gene-IXO1104_RS16950;Dbxref=Genbank:WP_011259782.1;Name=WP_011259782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259782.1;locus_tag=IXO1104_RS16950;product=DUF5668 domain-containing protein;protein_id=WP_011259782.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3656976 3657161 . + . ID=gene-IXO1104_RS16955;Name=IXO1104_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16955;old_locus_tag=IXO1104_16930 NZ_CP047492.1 Protein Homology CDS 3656976 3657161 . + 0 ID=cds-WP_011259783.1;Parent=gene-IXO1104_RS16955;Dbxref=Genbank:WP_011259783.1;Name=WP_011259783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486896.1;locus_tag=IXO1104_RS16955;product=DUF5668 domain-containing protein;protein_id=WP_011259783.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3657196 3657765 . - . ID=gene-IXO1104_RS16960;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=IXO1104_RS16960;old_locus_tag=IXO1104_16935 NZ_CP047492.1 Protein Homology CDS 3657196 3657765 . - 0 ID=cds-WP_011259784.1;Parent=gene-IXO1104_RS16960;Dbxref=Genbank:WP_011259784.1;Name=WP_011259784.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=IXO1104_RS16960;product=dCTP deaminase;protein_id=WP_011259784.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3657858 3658709 . - . ID=gene-IXO1104_RS16965;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=IXO1104_RS16965;old_locus_tag=IXO1104_16940 NZ_CP047492.1 Protein Homology CDS 3657858 3658709 . - 0 ID=cds-WP_011259785.1;Parent=gene-IXO1104_RS16965;Dbxref=Genbank:WP_011259785.1;Name=WP_011259785.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156372.1;locus_tag=IXO1104_RS16965;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_011259785.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3659177 3659872 . - . ID=gene-IXO1104_RS16970;Name=IXO1104_RS16970;end_range=3659872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16970;old_locus_tag=IXO1104_16945;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3659177 3659872 . - 0 ID=cds-IXO1104_RS16970;Parent=gene-IXO1104_RS16970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3659872,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS16970;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3660097 3662112 . + . ID=gene-IXO1104_RS16975;Name=IXO1104_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16975;old_locus_tag=IXO1104_16950 NZ_CP047492.1 Protein Homology CDS 3660097 3662112 . + 0 ID=cds-WP_011259787.1;Parent=gene-IXO1104_RS16975;Dbxref=Genbank:WP_011259787.1;Name=WP_011259787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969573.1;locus_tag=IXO1104_RS16975;product=M13 family metallopeptidase;protein_id=WP_011259787.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3662383 3663081 . - . ID=gene-IXO1104_RS16980;Name=IXO1104_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16980;old_locus_tag=IXO1104_16955 NZ_CP047492.1 Protein Homology CDS 3662383 3663081 . - 0 ID=cds-WP_012445555.1;Parent=gene-IXO1104_RS16980;Dbxref=Genbank:WP_012445555.1;Name=WP_012445555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169516.1;locus_tag=IXO1104_RS16980;product=rhomboid family intramembrane serine protease;protein_id=WP_012445555.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3663122 3663529 . - . ID=gene-IXO1104_RS16985;Name=IXO1104_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16985;old_locus_tag=IXO1104_16960 NZ_CP047492.1 Protein Homology CDS 3663122 3663529 . - 0 ID=cds-WP_011409081.1;Parent=gene-IXO1104_RS16985;Dbxref=Genbank:WP_011409081.1;Name=WP_011409081.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051802.1;locus_tag=IXO1104_RS16985;product=MGMT family protein;protein_id=WP_011409081.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3663770 3663949 . - . ID=gene-IXO1104_RS16990;Name=IXO1104_RS16990;end_range=3663949,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS16990;old_locus_tag=IXO1104_16965;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3663770 3663949 . - 0 ID=cds-IXO1104_RS16990;Parent=gene-IXO1104_RS16990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3663949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486876.1;locus_tag=IXO1104_RS16990;partial=true;product=glutathione-disulfide reductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3663967 3664929 . - . ID=gene-IXO1104_RS16995;Name=IXO1104_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS16995;old_locus_tag=IXO1104_16970 NZ_CP047492.1 Protein Homology CDS 3663967 3664929 . - 0 ID=cds-WP_164994150.1;Parent=gene-IXO1104_RS16995;Dbxref=Genbank:WP_164994150.1;Name=WP_164994150.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1104_RS16995;product=IS1595 family transposase;protein_id=WP_164994150.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3665021 3666217 . - . ID=gene-IXO1104_RS17000;Name=IXO1104_RS17000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17000;old_locus_tag=IXO1104_16975;partial=true;pseudo=true;start_range=.,3665021 NZ_CP047492.1 Protein Homology CDS 3665021 3666217 . - 0 ID=cds-IXO1104_RS17000;Parent=gene-IXO1104_RS17000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486876.1;locus_tag=IXO1104_RS17000;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;start_range=.,3665021;transl_table=11 NZ_CP047492.1 RefSeq gene 3666214 3667464 . - . ID=gene-IXO1104_RS17005;Name=IXO1104_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17005;old_locus_tag=IXO1104_16980 NZ_CP047492.1 Protein Homology CDS 3666214 3667464 . - 0 ID=cds-WP_011409084.1;Parent=gene-IXO1104_RS17005;Dbxref=Genbank:WP_011409084.1;Name=WP_011409084.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377592.1;locus_tag=IXO1104_RS17005;product=FAD-dependent oxidoreductase;protein_id=WP_011409084.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3667472 3668716 . - . ID=gene-IXO1104_RS17010;Name=IXO1104_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17010;old_locus_tag=IXO1104_16985 NZ_CP047492.1 Protein Homology CDS 3667472 3668716 . - 0 ID=cds-WP_011409085.1;Parent=gene-IXO1104_RS17010;Dbxref=Genbank:WP_011409085.1;Name=WP_011409085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486872.1;locus_tag=IXO1104_RS17010;product=DUF418 domain-containing protein;protein_id=WP_011409085.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3668944 3669423 . - . ID=gene-IXO1104_RS17015;Name=IXO1104_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17015;old_locus_tag=IXO1104_16990 NZ_CP047492.1 Protein Homology CDS 3668944 3669423 . - 0 ID=cds-WP_011259794.1;Parent=gene-IXO1104_RS17015;Dbxref=Genbank:WP_011259794.1;Name=WP_011259794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903985.1;locus_tag=IXO1104_RS17015;product=peptidylprolyl isomerase;protein_id=WP_011259794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3669534 3670070 . + . ID=gene-IXO1104_RS17020;Name=IXO1104_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17020;old_locus_tag=IXO1104_16995 NZ_CP047492.1 Protein Homology CDS 3669534 3670070 . + 0 ID=cds-WP_027704197.1;Parent=gene-IXO1104_RS17020;Dbxref=Genbank:WP_027704197.1;Name=WP_027704197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156384.1;locus_tag=IXO1104_RS17020;product=C40 family peptidase;protein_id=WP_027704197.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3670180 3670929 . + . ID=gene-IXO1104_RS17025;Name=IXO1104_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17025;old_locus_tag=IXO1104_17000 NZ_CP047492.1 Protein Homology CDS 3670180 3670929 . + 0 ID=cds-WP_011259796.1;Parent=gene-IXO1104_RS17025;Dbxref=Genbank:WP_011259796.1;Name=WP_011259796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437923.1;locus_tag=IXO1104_RS17025;product=C40 family peptidase;protein_id=WP_011259796.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3671137 3671628 . - . ID=gene-IXO1104_RS17030;Name=IXO1104_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17030;old_locus_tag=IXO1104_17005 NZ_CP047492.1 Protein Homology CDS 3671137 3671628 . - 0 ID=cds-WP_011259797.1;Parent=gene-IXO1104_RS17030;Dbxref=Genbank:WP_011259797.1;Name=WP_011259797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259797.1;locus_tag=IXO1104_RS17030;product=acyl-CoA thioesterase;protein_id=WP_011259797.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3671641 3671868 . - . ID=gene-IXO1104_RS17035;Name=IXO1104_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17035 NZ_CP047492.1 GeneMarkS-2+ CDS 3671641 3671868 . - 0 ID=cds-WP_125168763.1;Parent=gene-IXO1104_RS17035;Dbxref=Genbank:WP_125168763.1;Name=WP_125168763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17035;product=hypothetical protein;protein_id=WP_125168763.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3671875 3672710 . - . ID=gene-IXO1104_RS17040;Name=IXO1104_RS17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17040;old_locus_tag=IXO1104_17010;pseudo=true NZ_CP047492.1 Protein Homology CDS 3671875 3672710 . - 0 ID=cds-IXO1104_RS17040;Parent=gene-IXO1104_RS17040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112463.1;locus_tag=IXO1104_RS17040;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3672720 3674061 . - . ID=gene-IXO1104_RS17045;Name=IXO1104_RS17045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17045;old_locus_tag=IXO1104_17015;pseudo=true NZ_CP047492.1 Protein Homology CDS 3672720 3674061 . - 0 ID=cds-IXO1104_RS17045;Parent=gene-IXO1104_RS17045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300949.1;locus_tag=IXO1104_RS17045;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3674206 3675912 . + . ID=gene-IXO1104_RS17050;Name=IXO1104_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17050;old_locus_tag=IXO1104_17020 NZ_CP047492.1 Protein Homology CDS 3674206 3675912 . + 0 ID=cds-WP_012445565.1;Parent=gene-IXO1104_RS17050;Dbxref=Genbank:WP_012445565.1;Name=WP_012445565.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502713.1;locus_tag=IXO1104_RS17050;product=alkaline phosphatase;protein_id=WP_012445565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3675946 3677250 . + . ID=gene-IXO1104_RS17055;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=IXO1104_RS17055;old_locus_tag=IXO1104_17025 NZ_CP047492.1 Protein Homology CDS 3675946 3677250 . + 0 ID=cds-WP_012445566.1;Parent=gene-IXO1104_RS17055;Dbxref=Genbank:WP_012445566.1;Name=WP_012445566.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090562.1;locus_tag=IXO1104_RS17055;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_012445566.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3677282 3677542 . + . ID=gene-IXO1104_RS17060;Name=IXO1104_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17060;old_locus_tag=IXO1104_17030 NZ_CP047492.1 Protein Homology CDS 3677282 3677542 . + 0 ID=cds-WP_011259802.1;Parent=gene-IXO1104_RS17060;Dbxref=Genbank:WP_011259802.1;Name=WP_011259802.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159976.1;locus_tag=IXO1104_RS17060;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011259802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3677544 3678419 . + . ID=gene-IXO1104_RS17065;Name=IXO1104_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17065;old_locus_tag=IXO1104_17035 NZ_CP047492.1 Protein Homology CDS 3677544 3678419 . + 0 ID=cds-WP_011259803.1;Parent=gene-IXO1104_RS17065;Dbxref=Genbank:WP_011259803.1;Name=WP_011259803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174296.1;locus_tag=IXO1104_RS17065;product=polyprenyl synthetase family protein;protein_id=WP_011259803.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3679103 3680184 . + . ID=gene-IXO1104_RS17070;Name=IXO1104_RS17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17070;old_locus_tag=IXO1104_17040;pseudo=true NZ_CP047492.1 Protein Homology CDS 3679103 3680184 . + 0 ID=cds-IXO1104_RS17070;Parent=gene-IXO1104_RS17070;Note=frameshifted;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508287.1;locus_tag=IXO1104_RS17070;product=M35 family metallo-endopeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3680254 3680718 . - . ID=gene-IXO1104_RS17075;Name=IXO1104_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17075;old_locus_tag=IXO1104_17045 NZ_CP047492.1 Protein Homology CDS 3680254 3680718 . - 0 ID=cds-WP_027704198.1;Parent=gene-IXO1104_RS17075;Dbxref=Genbank:WP_027704198.1;Name=WP_027704198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112466.1;locus_tag=IXO1104_RS17075;product=DUF4870 domain-containing protein;protein_id=WP_027704198.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3680770 3680934 . - . ID=gene-IXO1104_RS17080;Name=IXO1104_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17080;old_locus_tag=IXO1104_17050 NZ_CP047492.1 Protein Homology CDS 3680770 3680934 . - 0 ID=cds-WP_228329765.1;Parent=gene-IXO1104_RS17080;Dbxref=Genbank:WP_228329765.1;Name=WP_228329765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502706.1;locus_tag=IXO1104_RS17080;product=DUF4870 domain-containing protein;protein_id=WP_228329765.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3680931 3681251 . - . ID=gene-IXO1104_RS17085;Name=IXO1104_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17085;old_locus_tag=IXO1104_17055 NZ_CP047492.1 GeneMarkS-2+ CDS 3680931 3681251 . - 0 ID=cds-WP_069963878.1;Parent=gene-IXO1104_RS17085;Dbxref=Genbank:WP_069963878.1;Name=WP_069963878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17085;product=hypothetical protein;protein_id=WP_069963878.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3681248 3682615 . - . ID=gene-IXO1104_RS17090;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17090;old_locus_tag=IXO1104_17060 NZ_CP047492.1 Protein Homology CDS 3681248 3682615 . - 0 ID=cds-WP_012445571.1;Parent=gene-IXO1104_RS17090;Dbxref=Genbank:WP_012445571.1;Name=WP_012445571.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019662101.1;locus_tag=IXO1104_RS17090;product=metalloprotease PmbA;protein_id=WP_012445571.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3682761 3683342 . + . ID=gene-IXO1104_RS17095;Name=IXO1104_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17095;old_locus_tag=IXO1104_17065 NZ_CP047492.1 Protein Homology CDS 3682761 3683342 . + 0 ID=cds-WP_011409095.1;Parent=gene-IXO1104_RS17095;Dbxref=Genbank:WP_011409095.1;Name=WP_011409095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156395.1;locus_tag=IXO1104_RS17095;product=ribosome-associated protein;protein_id=WP_011409095.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3683599 3685044 . - . ID=gene-IXO1104_RS17100;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=IXO1104_RS17100;old_locus_tag=IXO1104_17070 NZ_CP047492.1 Protein Homology CDS 3683599 3685044 . - 0 ID=cds-WP_012445573.1;Parent=gene-IXO1104_RS17100;Dbxref=Genbank:WP_012445573.1;Name=WP_012445573.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972594.1;locus_tag=IXO1104_RS17100;product=metalloprotease TldD;protein_id=WP_012445573.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3685143 3685885 . + . ID=gene-IXO1104_RS17105;Name=IXO1104_RS17105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17105;old_locus_tag=IXO1104_17075;pseudo=true NZ_CP047492.1 Protein Homology CDS 3685143 3685885 . + 0 ID=cds-IXO1104_RS17105;Parent=gene-IXO1104_RS17105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919426.1;locus_tag=IXO1104_RS17105;product=DUF6065 family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3685891 3689811 . - . ID=gene-IXO1104_RS17110;Name=IXO1104_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17110;old_locus_tag=IXO1104_17080 NZ_CP047492.1 Protein Homology CDS 3685891 3689811 . - 0 ID=cds-WP_075240527.1;Parent=gene-IXO1104_RS17110;Dbxref=Genbank:WP_075240527.1;Name=WP_075240527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051814.1;locus_tag=IXO1104_RS17110;product=YhdP family protein;protein_id=WP_075240527.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3689959 3691458 . - . ID=gene-IXO1104_RS17115;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=IXO1104_RS17115;old_locus_tag=IXO1104_17085 NZ_CP047492.1 Protein Homology CDS 3689959 3691458 . - 0 ID=cds-WP_011259814.1;Parent=gene-IXO1104_RS17115;Dbxref=Genbank:WP_011259814.1;Name=WP_011259814.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802933.1;locus_tag=IXO1104_RS17115;product=ribonuclease G;protein_id=WP_011259814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3691458 3692030 . - . ID=gene-IXO1104_RS17120;Name=IXO1104_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17120;old_locus_tag=IXO1104_17090 NZ_CP047492.1 Protein Homology CDS 3691458 3692030 . - 0 ID=cds-WP_011409098.1;Parent=gene-IXO1104_RS17120;Dbxref=Genbank:WP_011409098.1;Name=WP_011409098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117854.1;locus_tag=IXO1104_RS17120;product=Maf-like protein;protein_id=WP_011409098.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3692169 3692903 . + . ID=gene-IXO1104_RS17125;Name=IXO1104_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17125;old_locus_tag=IXO1104_17095 NZ_CP047492.1 Protein Homology CDS 3692169 3692903 . + 0 ID=cds-WP_011259816.1;Parent=gene-IXO1104_RS17125;Dbxref=Genbank:WP_011259816.1;Name=WP_011259816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302808.1;locus_tag=IXO1104_RS17125;product=SIMPL domain-containing protein;protein_id=WP_011259816.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3693037 3694005 . - . ID=gene-IXO1104_RS17130;Name=IXO1104_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17130;old_locus_tag=IXO1104_17100 NZ_CP047492.1 Protein Homology CDS 3693037 3694005 . - 0 ID=cds-WP_011258802.1-12;Parent=gene-IXO1104_RS17130;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS17130;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3694290 3695088 . + . ID=gene-IXO1104_RS17135;Name=IXO1104_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17135;old_locus_tag=IXO1104_17105 NZ_CP047492.1 Protein Homology CDS 3694290 3694561 . + 0 ID=cds-WP_094187728.1-8;Parent=gene-IXO1104_RS17135;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS17135;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3694560 3695088 . + 1 ID=cds-WP_094187728.1-8;Parent=gene-IXO1104_RS17135;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS17135;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3695162 3695239 . + . ID=gene-IXO1104_RS17140;Name=IXO1104_RS17140;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS17140;old_locus_tag=IXO1104_17110 NZ_CP047492.1 cmsearch ncRNA 3695162 3695239 . + . ID=rna-IXO1104_RS17140;Parent=gene-IXO1104_RS17140;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17140;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3695162 3695239 . + . ID=exon-IXO1104_RS17140-1;Parent=rna-IXO1104_RS17140;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17140;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3695387 3698500 . + . ID=gene-IXO1104_RS17145;Name=IXO1104_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17145;old_locus_tag=IXO1104_17115 NZ_CP047492.1 Protein Homology CDS 3695387 3698500 . + 0 ID=cds-WP_075240646.1;Parent=gene-IXO1104_RS17145;Dbxref=Genbank:WP_075240646.1;Name=WP_075240646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377546.1;locus_tag=IXO1104_RS17145;product=TonB-dependent receptor;protein_id=WP_075240646.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3698880 3699480 . + . ID=gene-IXO1104_RS17150;Name=IXO1104_RS17150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17150;old_locus_tag=IXO1104_17120;pseudo=true NZ_CP047492.1 Protein Homology CDS 3698880 3699480 . + 0 ID=cds-IXO1104_RS17150;Parent=gene-IXO1104_RS17150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163037.1;locus_tag=IXO1104_RS17150;product=energy transducer TonB;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3699767 3699842 . + . ID=gene-IXO1104_RS17155;Name=IXO1104_RS17155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS17155;old_locus_tag=IXO1104_17125 NZ_CP047492.1 cmsearch ncRNA 3699767 3699842 . + . ID=rna-IXO1104_RS17155;Parent=gene-IXO1104_RS17155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17155;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3699767 3699842 . + . ID=exon-IXO1104_RS17155-1;Parent=rna-IXO1104_RS17155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17155;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3699916 3700386 . - . ID=gene-IXO1104_RS17160;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS17160;old_locus_tag=IXO1104_17130 NZ_CP047492.1 Protein Homology CDS 3699916 3700386 . - 0 ID=cds-WP_011409102.1;Parent=gene-IXO1104_RS17160;Dbxref=Genbank:WP_011409102.1;Name=WP_011409102.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301047.1;locus_tag=IXO1104_RS17160;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011409102.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3700508 3700963 . + . ID=gene-IXO1104_RS17165;Name=IXO1104_RS17165;end_range=3700963,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17165;old_locus_tag=IXO1104_17135;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3700508 3700963 . + 0 ID=cds-IXO1104_RS17165;Parent=gene-IXO1104_RS17165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3700963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933077.1;locus_tag=IXO1104_RS17165;partial=true;product=PhoX family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3701472 3702587 . - . ID=gene-IXO1104_RS17170;Name=IXO1104_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17170;old_locus_tag=IXO1104_17145 NZ_CP047492.1 Protein Homology CDS 3701472 3702587 . - 0 ID=cds-WP_011259821.1;Parent=gene-IXO1104_RS17170;Dbxref=Genbank:WP_011259821.1;Name=WP_011259821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445581.1;locus_tag=IXO1104_RS17170;product=J domain-containing protein;protein_id=WP_011259821.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3702599 3703015 . - . ID=gene-IXO1104_RS17175;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=IXO1104_RS17175;old_locus_tag=IXO1104_17150 NZ_CP047492.1 Protein Homology CDS 3702599 3703015 . - 0 ID=cds-WP_011259822.1;Parent=gene-IXO1104_RS17175;Dbxref=Genbank:WP_011259822.1;Name=WP_011259822.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259822.1;locus_tag=IXO1104_RS17175;product=ribosome silencing factor;protein_id=WP_011259822.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3703072 3703971 . - . ID=gene-IXO1104_RS17180;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=IXO1104_RS17180;old_locus_tag=IXO1104_17155 NZ_CP047492.1 Protein Homology CDS 3703072 3703971 . - 0 ID=cds-WP_027703805.1;Parent=gene-IXO1104_RS17180;Dbxref=Genbank:WP_027703805.1;Name=WP_027703805.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157150.1;locus_tag=IXO1104_RS17180;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_027703805.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3703968 3704996 . - . ID=gene-IXO1104_RS17185;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17185;old_locus_tag=IXO1104_17160 NZ_CP047492.1 Protein Homology CDS 3703968 3704996 . - 0 ID=cds-WP_011259823.1;Parent=gene-IXO1104_RS17185;Dbxref=Genbank:WP_011259823.1;Name=WP_011259823.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116404.1;locus_tag=IXO1104_RS17185;product=DNA polymerase III subunit delta;protein_id=WP_011259823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3705019 3705654 . - . ID=gene-IXO1104_RS17190;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=IXO1104_RS17190;old_locus_tag=IXO1104_17165 NZ_CP047492.1 Protein Homology CDS 3705019 3705654 . - 0 ID=cds-WP_011409105.1;Parent=gene-IXO1104_RS17190;Dbxref=Genbank:WP_011409105.1;Name=WP_011409105.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162628.1;locus_tag=IXO1104_RS17190;product=LPS assembly lipoprotein LptE;protein_id=WP_011409105.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3706168 3708810 . - . ID=gene-IXO1104_RS17195;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=IXO1104_RS17195;old_locus_tag=IXO1104_17170 NZ_CP047492.1 Protein Homology CDS 3706168 3708810 . - 0 ID=cds-WP_011259825.1;Parent=gene-IXO1104_RS17195;Dbxref=Genbank:WP_011259825.1;Name=WP_011259825.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972619.1;locus_tag=IXO1104_RS17195;product=leucine--tRNA ligase;protein_id=WP_011259825.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3708883 3709494 . - . ID=gene-IXO1104_RS17200;Name=IXO1104_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17200;old_locus_tag=IXO1104_17175 NZ_CP047492.1 Protein Homology CDS 3708883 3709494 . - 0 ID=cds-WP_011259826.1;Parent=gene-IXO1104_RS17200;Dbxref=Genbank:WP_011259826.1;Name=WP_011259826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502688.1;locus_tag=IXO1104_RS17200;product=DUF998 domain-containing protein;protein_id=WP_011259826.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3709699 3710556 . + . ID=gene-IXO1104_RS17205;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17205;old_locus_tag=IXO1104_17180 NZ_CP047492.1 Protein Homology CDS 3709699 3710556 . + 0 ID=cds-WP_011409107.1;Parent=gene-IXO1104_RS17205;Dbxref=Genbank:WP_011409107.1;Name=WP_011409107.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919399.1;locus_tag=IXO1104_RS17205;product=thioredoxin;protein_id=WP_011409107.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3710812 3711261 . + . ID=gene-IXO1104_RS17210;Name=IXO1104_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17210;old_locus_tag=IXO1104_17185 NZ_CP047492.1 Protein Homology CDS 3710812 3711261 . + 0 ID=cds-WP_027703806.1;Parent=gene-IXO1104_RS17210;Dbxref=Genbank:WP_027703806.1;Name=WP_027703806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304338.1;locus_tag=IXO1104_RS17210;product=DUF4442 domain-containing protein;protein_id=WP_027703806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3711561 3712526 . - . ID=gene-IXO1104_RS17215;Name=IXO1104_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17215;old_locus_tag=IXO1104_17190 NZ_CP047492.1 Protein Homology CDS 3711561 3712526 . - 0 ID=cds-WP_109181928.1-3;Parent=gene-IXO1104_RS17215;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS17215;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3712651 3713414 . + . ID=gene-IXO1104_RS17220;Name=IXO1104_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17220;old_locus_tag=IXO1104_17195 NZ_CP047492.1 Protein Homology CDS 3712651 3712966 . + 0 ID=cds-WP_094187715.1-12;Parent=gene-IXO1104_RS17220;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS17220;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3712966 3713414 . + 2 ID=cds-WP_094187715.1-12;Parent=gene-IXO1104_RS17220;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS17220;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3713835 3714317 . + . ID=gene-IXO1104_RS17225;Name=IXO1104_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17225 NZ_CP047492.1 Protein Homology CDS 3713835 3714317 . + 0 ID=cds-WP_228383552.1;Parent=gene-IXO1104_RS17225;Dbxref=Genbank:WP_228383552.1;Name=WP_228383552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157142.1;locus_tag=IXO1104_RS17225;product=type III effector protein XopAB;protein_id=WP_228383552.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3714791 3715024 . + . ID=gene-IXO1104_RS17230;Name=IXO1104_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17230;old_locus_tag=IXO1104_17205 NZ_CP047492.1 Protein Homology CDS 3714791 3715024 . + 0 ID=cds-WP_011259829.1;Parent=gene-IXO1104_RS17230;Dbxref=Genbank:WP_011259829.1;Name=WP_011259829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051827.1;locus_tag=IXO1104_RS17230;product=DUF378 domain-containing protein;protein_id=WP_011259829.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3715058 3716071 . + . ID=gene-IXO1104_RS17235;Name=IXO1104_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17235;old_locus_tag=IXO1104_17210 NZ_CP047492.1 Protein Homology CDS 3715058 3716071 . + 0 ID=cds-WP_011409111.1;Parent=gene-IXO1104_RS17235;Dbxref=Genbank:WP_011409111.1;Name=WP_011409111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502684.1;locus_tag=IXO1104_RS17235;product=peptidylprolyl isomerase;protein_id=WP_011409111.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3716039 3716230 . - . ID=gene-IXO1104_RS17240;Name=IXO1104_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17240;old_locus_tag=IXO1104_17215 NZ_CP047492.1 GeneMarkS-2+ CDS 3716039 3716230 . - 0 ID=cds-WP_011259831.1;Parent=gene-IXO1104_RS17240;Dbxref=Genbank:WP_011259831.1;Name=WP_011259831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17240;product=hypothetical protein;protein_id=WP_011259831.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3716321 3717639 . - . ID=gene-IXO1104_RS17245;Name=IXO1104_RS17245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17245;old_locus_tag=IXO1104_17220;pseudo=true NZ_CP047492.1 Protein Homology CDS 3716321 3717639 . - 0 ID=cds-IXO1104_RS17245;Parent=gene-IXO1104_RS17245;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17245;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3717727 3718941 . - . ID=gene-IXO1104_RS17250;Name=IXO1104_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17250;old_locus_tag=IXO1104_17225 NZ_CP047492.1 Protein Homology CDS 3717727 3718941 . - 0 ID=cds-WP_011407913.1-6;Parent=gene-IXO1104_RS17250;Dbxref=Genbank:WP_011407913.1;Name=WP_011407913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS17250;product=IS4 family transposase;protein_id=WP_011407913.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3719304 3720260 . + . ID=gene-IXO1104_RS17255;Name=IXO1104_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17255;old_locus_tag=IXO1104_17230 NZ_CP047492.1 Protein Homology CDS 3719304 3720260 . + 0 ID=cds-WP_011407237.1-11;Parent=gene-IXO1104_RS17255;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS17255;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3720292 3721527 . - . ID=gene-IXO1104_RS17260;Name=IXO1104_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17260;old_locus_tag=IXO1104_17235 NZ_CP047492.1 Protein Homology CDS 3720292 3721527 . - 0 ID=cds-WP_011260830.1;Parent=gene-IXO1104_RS17260;Dbxref=Genbank:WP_011260830.1;Name=WP_011260830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS17260;product=ISL3 family transposase;protein_id=WP_011260830.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3721656 3722624 . - . ID=gene-IXO1104_RS17265;Name=IXO1104_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17265;old_locus_tag=IXO1104_17240 NZ_CP047492.1 Protein Homology CDS 3721656 3722624 . - 0 ID=cds-WP_011258802.1-13;Parent=gene-IXO1104_RS17265;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS17265;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3722725 3723681 . - . ID=gene-IXO1104_RS17270;Name=IXO1104_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17270;old_locus_tag=IXO1104_17245 NZ_CP047492.1 Protein Homology CDS 3722725 3723681 . - 0 ID=cds-WP_041182719.1-2;Parent=gene-IXO1104_RS17270;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS17270;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3723780 3724211 . + . ID=gene-IXO1104_RS17275;Name=IXO1104_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17275;old_locus_tag=IXO1104_17250 NZ_CP047492.1 GeneMarkS-2+ CDS 3723780 3724211 . + 0 ID=cds-WP_230455481.1;Parent=gene-IXO1104_RS17275;Dbxref=Genbank:WP_230455481.1;Name=WP_230455481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17275;product=hypothetical protein;protein_id=WP_230455481.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3724208 3725173 . - . ID=gene-IXO1104_RS17280;Name=IXO1104_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17280;old_locus_tag=IXO1104_17255 NZ_CP047492.1 Protein Homology CDS 3724208 3725173 . - 0 ID=cds-WP_133265413.1-2;Parent=gene-IXO1104_RS17280;Dbxref=Genbank:WP_133265413.1;Name=WP_133265413.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS17280;product=IS1595 family transposase;protein_id=WP_133265413.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3725414 3726177 . + . ID=gene-IXO1104_RS17285;Name=IXO1104_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17285;old_locus_tag=IXO1104_17260 NZ_CP047492.1 Protein Homology CDS 3725414 3725729 . + 0 ID=cds-WP_094187771.1-2;Parent=gene-IXO1104_RS17285;Dbxref=Genbank:WP_094187771.1;Name=WP_094187771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS17285;product=IS5 family transposase;protein_id=WP_094187771.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3725729 3726177 . + 2 ID=cds-WP_094187771.1-2;Parent=gene-IXO1104_RS17285;Dbxref=Genbank:WP_094187771.1;Name=WP_094187771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS17285;product=IS5 family transposase;protein_id=WP_094187771.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3726479 3728611 . + . ID=gene-IXO1104_RS17290;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=IXO1104_RS17290;old_locus_tag=IXO1104_17265 NZ_CP047492.1 Protein Homology CDS 3726479 3728611 . + 0 ID=cds-WP_011409116.1;Parent=gene-IXO1104_RS17290;Dbxref=Genbank:WP_011409116.1;Name=WP_011409116.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172327.1;locus_tag=IXO1104_RS17290;product=glycogen debranching protein GlgX;protein_id=WP_011409116.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3729162 3730130 . - . ID=gene-IXO1104_RS17295;Name=IXO1104_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17295;old_locus_tag=IXO1104_17270 NZ_CP047492.1 Protein Homology CDS 3729162 3730130 . - 0 ID=cds-WP_011258802.1-14;Parent=gene-IXO1104_RS17295;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS17295;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3730275 3730919 . + . ID=gene-IXO1104_RS17300;Name=IXO1104_RS17300;end_range=3730919,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17300;old_locus_tag=IXO1104_17275;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3730275 3730919 . + 0 ID=cds-IXO1104_RS17300;Parent=gene-IXO1104_RS17300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3730919,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015257952.1;locus_tag=IXO1104_RS17300;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3730931 3731887 . - . ID=gene-IXO1104_RS17305;Name=IXO1104_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17305;old_locus_tag=IXO1104_17280 NZ_CP047492.1 Protein Homology CDS 3730931 3731887 . - 0 ID=cds-WP_041182545.1-9;Parent=gene-IXO1104_RS17305;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS17305;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3732175 3732639 . - . ID=gene-IXO1104_RS17310;Name=IXO1104_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17310;old_locus_tag=IXO1104_17285 NZ_CP047492.1 Protein Homology CDS 3732175 3732639 . - 0 ID=cds-WP_075239868.1;Parent=gene-IXO1104_RS17310;Dbxref=Genbank:WP_075239868.1;Name=WP_075239868.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026766.2;locus_tag=IXO1104_RS17310;product=Imm26 family immunity protein;protein_id=WP_075239868.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3732636 3737318 . - . ID=gene-IXO1104_RS17315;Name=IXO1104_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17315;old_locus_tag=IXO1104_17290 NZ_CP047492.1 Protein Homology CDS 3732636 3737318 . - 0 ID=cds-WP_241846814.1;Parent=gene-IXO1104_RS17315;Dbxref=Genbank:WP_241846814.1;Name=WP_241846814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268398.1;locus_tag=IXO1104_RS17315;product=DUF6531 domain-containing protein;protein_id=WP_241846814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3737337 3737465 . - . ID=gene-IXO1104_RS17320;Name=IXO1104_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17320 NZ_CP047492.1 Protein Homology CDS 3737337 3737465 . - 0 ID=cds-WP_011258410.1;Parent=gene-IXO1104_RS17320;Dbxref=Genbank:WP_011258410.1;Name=WP_011258410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300517.1;locus_tag=IXO1104_RS17320;product=hypothetical protein;protein_id=WP_011258410.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3737462 3739081 . - . ID=gene-IXO1104_RS17325;Name=IXO1104_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17325;old_locus_tag=IXO1104_17295 NZ_CP047492.1 Protein Homology CDS 3737462 3739081 . - 0 ID=cds-WP_044756973.1;Parent=gene-IXO1104_RS17325;Dbxref=Genbank:WP_044756973.1;Name=WP_044756973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444471.1;locus_tag=IXO1104_RS17325;product=hypothetical protein;protein_id=WP_044756973.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3739105 3741375 . - . ID=gene-IXO1104_RS17330;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=IXO1104_RS17330;old_locus_tag=IXO1104_17300 NZ_CP047492.1 Protein Homology CDS 3739105 3741375 . - 0 ID=cds-WP_011258406.1;Parent=gene-IXO1104_RS17330;Dbxref=Genbank:WP_011258406.1;Name=WP_011258406.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=vgrG;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300515.1;locus_tag=IXO1104_RS17330;product=type VI secretion system tip protein VgrG;protein_id=WP_011258406.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3741576 3743456 . - . ID=gene-IXO1104_RS17335;Name=IXO1104_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17335;old_locus_tag=IXO1104_17305 NZ_CP047492.1 Protein Homology CDS 3741576 3743456 . - 0 ID=cds-WP_012444469.1;Parent=gene-IXO1104_RS17335;Dbxref=Genbank:WP_012444469.1;Name=WP_012444469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346766.1;locus_tag=IXO1104_RS17335;product=tetratricopeptide repeat protein;protein_id=WP_012444469.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3743623 3743958 . - . ID=gene-IXO1104_RS17340;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=IXO1104_RS17340;old_locus_tag=IXO1104_17310 NZ_CP047492.1 Protein Homology CDS 3743623 3743958 . - 0 ID=cds-WP_010365831.1;Parent=gene-IXO1104_RS17340;Dbxref=Genbank:WP_010365831.1;Name=WP_010365831.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoD;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156584.1;locus_tag=IXO1104_RS17340;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_010365831.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3743958 3744590 . - . ID=gene-IXO1104_RS17345;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=IXO1104_RS17345;old_locus_tag=IXO1104_17315 NZ_CP047492.1 Protein Homology CDS 3743958 3744590 . - 0 ID=cds-WP_012444468.1;Parent=gene-IXO1104_RS17345;Dbxref=Genbank:WP_012444468.1;Name=WP_012444468.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoC;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851535.1;locus_tag=IXO1104_RS17345;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_012444468.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3744587 3746587 . - . ID=gene-IXO1104_RS17350;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=IXO1104_RS17350;old_locus_tag=IXO1104_17320 NZ_CP047492.1 Protein Homology CDS 3744587 3746587 . - 0 ID=cds-WP_011408097.1;Parent=gene-IXO1104_RS17350;Dbxref=Genbank:WP_011408097.1;Name=WP_011408097.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoB;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472398.1;locus_tag=IXO1104_RS17350;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_011408097.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3746587 3747522 . - . ID=gene-IXO1104_RS17355;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17355;old_locus_tag=IXO1104_17325 NZ_CP047492.1 Protein Homology CDS 3746587 3747522 . - 0 ID=cds-WP_011258402.1;Parent=gene-IXO1104_RS17355;Dbxref=Genbank:WP_011258402.1;Name=WP_011258402.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoA;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=IXO1104_RS17355;product=ubiquinol oxidase subunit II;protein_id=WP_011258402.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3747884 3747959 . - . ID=gene-IXO1104_RS17360;Name=IXO1104_RS17360;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS17360;old_locus_tag=IXO1104_17330 NZ_CP047492.1 tRNAscan-SE tRNA 3747884 3747959 . - . ID=rna-IXO1104_RS17360;Parent=gene-IXO1104_RS17360;anticodon=(pos:complement(3747924..3747926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS17360;product=tRNA-Thr NZ_CP047492.1 tRNAscan-SE exon 3747884 3747959 . - . ID=exon-IXO1104_RS17360-1;Parent=rna-IXO1104_RS17360;anticodon=(pos:complement(3747924..3747926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS17360;product=tRNA-Thr NZ_CP047492.1 RefSeq gene 3748036 3748986 . - . ID=gene-IXO1104_RS17365;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=IXO1104_RS17365;old_locus_tag=IXO1104_17335 NZ_CP047492.1 Protein Homology CDS 3748036 3748986 . - 0 ID=cds-WP_011258401.1;Parent=gene-IXO1104_RS17365;Dbxref=Genbank:WP_011258401.1;Name=WP_011258401.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258401.1;locus_tag=IXO1104_RS17365;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011258401.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3749076 3749576 . - . ID=gene-IXO1104_RS17370;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17370;old_locus_tag=IXO1104_17340 NZ_CP047492.1 Protein Homology CDS 3749076 3749576 . - 0 ID=cds-WP_011408096.1;Parent=gene-IXO1104_RS17370;Dbxref=Genbank:WP_011408096.1;Name=WP_011408096.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408096.1;locus_tag=IXO1104_RS17370;product=signal peptidase II;protein_id=WP_011408096.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3749891 3752722 . - . ID=gene-IXO1104_RS17375;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=IXO1104_RS17375;old_locus_tag=IXO1104_17345 NZ_CP047492.1 Protein Homology CDS 3749891 3752722 . - 0 ID=cds-WP_011258399.1;Parent=gene-IXO1104_RS17375;Dbxref=Genbank:WP_011258399.1;Name=WP_011258399.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928804.1;locus_tag=IXO1104_RS17375;product=isoleucine--tRNA ligase;protein_id=WP_011258399.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3752729 3753745 . - . ID=gene-IXO1104_RS17380;Name=IXO1104_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17380;old_locus_tag=IXO1104_17350 NZ_CP047492.1 Protein Homology CDS 3752729 3753745 . - 0 ID=cds-WP_011408095.1;Parent=gene-IXO1104_RS17380;Dbxref=Genbank:WP_011408095.1;Name=WP_011408095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165409.1;locus_tag=IXO1104_RS17380;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_011408095.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3753944 3755548 . - . ID=gene-IXO1104_RS17385;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS17385;old_locus_tag=IXO1104_17355 NZ_CP047492.1 Protein Homology CDS 3753944 3755548 . - 0 ID=cds-WP_011408094.1;Parent=gene-IXO1104_RS17385;Dbxref=Genbank:WP_011408094.1;Name=WP_011408094.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=IXO1104_RS17385;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_011408094.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3755665 3755934 . + . ID=gene-IXO1104_RS17390;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=IXO1104_RS17390;old_locus_tag=IXO1104_17360 NZ_CP047492.1 Protein Homology CDS 3755665 3755934 . + 0 ID=cds-WP_003484323.1;Parent=gene-IXO1104_RS17390;Dbxref=Genbank:WP_003484323.1;Name=WP_003484323.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184515.1;locus_tag=IXO1104_RS17390;product=30S ribosomal protein S20;protein_id=WP_003484323.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3756026 3757078 . - . ID=gene-IXO1104_RS17395;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=IXO1104_RS17395;old_locus_tag=IXO1104_17365 NZ_CP047492.1 Protein Homology CDS 3756026 3757078 . - 0 ID=cds-WP_011258396.1;Parent=gene-IXO1104_RS17395;Dbxref=Genbank:WP_011258396.1;Name=WP_011258396.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036350.1;locus_tag=IXO1104_RS17395;product=GTPase ObgE;protein_id=WP_011258396.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3757311 3757571 . - . ID=gene-IXO1104_RS17400;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17400;old_locus_tag=IXO1104_17370 NZ_CP047492.1 Protein Homology CDS 3757311 3757571 . - 0 ID=cds-WP_011258395.1;Parent=gene-IXO1104_RS17400;Dbxref=Genbank:WP_011258395.1;Name=WP_011258395.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534652.1;locus_tag=IXO1104_RS17400;product=50S ribosomal protein L27;protein_id=WP_011258395.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3757584 3757904 . - . ID=gene-IXO1104_RS17405;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=IXO1104_RS17405;old_locus_tag=IXO1104_17375 NZ_CP047492.1 Protein Homology CDS 3757584 3757904 . - 0 ID=cds-WP_011258394.1;Parent=gene-IXO1104_RS17405;Dbxref=Genbank:WP_011258394.1;Name=WP_011258394.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484328.1;locus_tag=IXO1104_RS17405;product=50S ribosomal protein L21;protein_id=WP_011258394.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3758197 3761163 . + . ID=gene-IXO1104_RS17410;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17410;old_locus_tag=IXO1104_17380 NZ_CP047492.1 Protein Homology CDS 3758197 3761163 . + 0 ID=cds-WP_012444462.1;Parent=gene-IXO1104_RS17410;Dbxref=Genbank:WP_012444462.1;Name=WP_012444462.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504280.1;locus_tag=IXO1104_RS17410;product=excinuclease ABC subunit UvrA;protein_id=WP_012444462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3761163 3761567 . + . ID=gene-IXO1104_RS17415;Name=IXO1104_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17415;old_locus_tag=IXO1104_17385 NZ_CP047492.1 Protein Homology CDS 3761163 3761567 . + 0 ID=cds-WP_011408092.1;Parent=gene-IXO1104_RS17415;Dbxref=Genbank:WP_011408092.1;Name=WP_011408092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989963.1;locus_tag=IXO1104_RS17415;product=acyl-CoA thioesterase;protein_id=WP_011408092.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3761681 3762145 . - . ID=gene-IXO1104_RS17420;Name=IXO1104_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17420;old_locus_tag=IXO1104_17390 NZ_CP047492.1 Protein Homology CDS 3761681 3762145 . - 0 ID=cds-WP_011258392.1;Parent=gene-IXO1104_RS17420;Dbxref=Genbank:WP_011258392.1;Name=WP_011258392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346748.1;locus_tag=IXO1104_RS17420;product=copper chaperone PCu(A)C;protein_id=WP_011258392.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3762169 3762939 . + . ID=gene-IXO1104_RS17425;Name=IXO1104_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17425;old_locus_tag=IXO1104_17395 NZ_CP047492.1 Protein Homology CDS 3762169 3762939 . + 0 ID=cds-WP_011408091.1;Parent=gene-IXO1104_RS17425;Dbxref=Genbank:WP_011408091.1;Name=WP_011408091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156572.1;locus_tag=IXO1104_RS17425;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_011408091.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3763010 3763915 . + . ID=gene-IXO1104_RS17430;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=IXO1104_RS17430;old_locus_tag=IXO1104_17400 NZ_CP047492.1 Protein Homology CDS 3763010 3763915 . + 0 ID=cds-WP_011408090.1;Parent=gene-IXO1104_RS17430;Dbxref=Genbank:WP_011408090.1;Name=WP_011408090.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850289.1;locus_tag=IXO1104_RS17430;product=acyl-CoA thioesterase II;protein_id=WP_011408090.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3764143 3764646 . + . ID=gene-IXO1104_RS17435;Name=IXO1104_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17435;old_locus_tag=IXO1104_17405 NZ_CP047492.1 Protein Homology CDS 3764143 3764646 . + 0 ID=cds-WP_011408089.1;Parent=gene-IXO1104_RS17435;Dbxref=Genbank:WP_011408089.1;Name=WP_011408089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156570.1;locus_tag=IXO1104_RS17435;product=hypothetical protein;protein_id=WP_011408089.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3764758 3765418 . + . ID=gene-IXO1104_RS17440;Name=IXO1104_RS17440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17440;old_locus_tag=IXO1104_17410;pseudo=true NZ_CP047492.1 Protein Homology CDS 3764758 3765418 . + 0 ID=cds-IXO1104_RS17440;Parent=gene-IXO1104_RS17440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156569.1;locus_tag=IXO1104_RS17440;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3765726 3766211 . + . ID=gene-IXO1104_RS17445;Name=IXO1104_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17445;old_locus_tag=IXO1104_17415 NZ_CP047492.1 Protein Homology CDS 3765726 3766211 . + 0 ID=cds-WP_011258387.1;Parent=gene-IXO1104_RS17445;Dbxref=Genbank:WP_011258387.1;Name=WP_011258387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167060.1;locus_tag=IXO1104_RS17445;product=hypothetical protein;protein_id=WP_011258387.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3766345 3766926 . - . ID=gene-IXO1104_RS17450;Name=IXO1104_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17450;old_locus_tag=IXO1104_17420 NZ_CP047492.1 Protein Homology CDS 3766345 3766926 . - 0 ID=cds-WP_011408086.1;Parent=gene-IXO1104_RS17450;Dbxref=Genbank:WP_011408086.1;Name=WP_011408086.1;Ontology_term=GO:0005509;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156567.1;locus_tag=IXO1104_RS17450;product=EF-hand domain-containing protein;protein_id=WP_011408086.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3767146 3767901 . + . ID=gene-IXO1104_RS17455;Name=IXO1104_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17455;old_locus_tag=IXO1104_17425 NZ_CP047492.1 Protein Homology CDS 3767146 3767901 . + 0 ID=cds-WP_011408085.1;Parent=gene-IXO1104_RS17455;Dbxref=Genbank:WP_011408085.1;Name=WP_011408085.1;Ontology_term=GO:0016598,GO:0004057,GO:0008914;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA,leucyltransferase activity|0008914||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258385.1;locus_tag=IXO1104_RS17455;product=arginyltransferase;protein_id=WP_011408085.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3767855 3769186 . + . ID=gene-IXO1104_RS17460;Name=IXO1104_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17460;old_locus_tag=IXO1104_17430 NZ_CP047492.1 Protein Homology CDS 3767855 3769186 . + 0 ID=cds-WP_027703288.1;Parent=gene-IXO1104_RS17460;Dbxref=Genbank:WP_027703288.1;Name=WP_027703288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371500.1;locus_tag=IXO1104_RS17460;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_027703288.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3769193 3769405 . - . ID=gene-IXO1104_RS17465;Name=IXO1104_RS17465;end_range=3769405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17465;old_locus_tag=IXO1104_17435;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3769193 3769405 . - 0 ID=cds-IXO1104_RS17465;Parent=gene-IXO1104_RS17465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3769405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS17465;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3769491 3771092 . - . ID=gene-IXO1104_RS17470;Name=IXO1104_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17470;old_locus_tag=IXO1104_17440 NZ_CP047492.1 Protein Homology CDS 3769491 3771092 . - 0 ID=cds-WP_011258382.1;Parent=gene-IXO1104_RS17470;Dbxref=Genbank:WP_011258382.1;Name=WP_011258382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156983.1;locus_tag=IXO1104_RS17470;product=membrane protein;protein_id=WP_011258382.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3771469 3772614 . + . ID=gene-IXO1104_RS17475;Name=IXO1104_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17475;old_locus_tag=IXO1104_17445 NZ_CP047492.1 Protein Homology CDS 3771469 3772614 . + 0 ID=cds-WP_228329710.1;Parent=gene-IXO1104_RS17475;Dbxref=Genbank:WP_228329710.1;Name=WP_228329710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408083.1;locus_tag=IXO1104_RS17475;product=DUF4432 family protein;protein_id=WP_228329710.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3772710 3773183 . - . ID=gene-IXO1104_RS17480;Name=IXO1104_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17480;old_locus_tag=IXO1104_17450 NZ_CP047492.1 Protein Homology CDS 3772710 3773183 . - 0 ID=cds-WP_011408082.1;Parent=gene-IXO1104_RS17480;Dbxref=Genbank:WP_011408082.1;Name=WP_011408082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156981.1;locus_tag=IXO1104_RS17480;product=DUF3574 domain-containing protein;protein_id=WP_011408082.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3773419 3775854 . + . ID=gene-IXO1104_RS17485;Name=IXO1104_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17485;old_locus_tag=IXO1104_17455 NZ_CP047492.1 Protein Homology CDS 3773419 3775854 . + 0 ID=cds-WP_011408081.1;Parent=gene-IXO1104_RS17485;Dbxref=Genbank:WP_011408081.1;Name=WP_011408081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158509.1;locus_tag=IXO1104_RS17485;product=TonB-dependent receptor;protein_id=WP_011408081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3776324 3776947 . + . ID=gene-IXO1104_RS17490;Name=IXO1104_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17490;old_locus_tag=IXO1104_17460 NZ_CP047492.1 Protein Homology CDS 3776324 3776947 . + 0 ID=cds-WP_228329709.1;Parent=gene-IXO1104_RS17490;Dbxref=Genbank:WP_228329709.1;Name=WP_228329709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303881.1;locus_tag=IXO1104_RS17490;product=hypothetical protein;protein_id=WP_228329709.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3777173 3777931 . + . ID=gene-IXO1104_RS17495;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=IXO1104_RS17495;old_locus_tag=IXO1104_17465 NZ_CP047492.1 Protein Homology CDS 3777173 3777931 . + 0 ID=cds-WP_011408079.1;Parent=gene-IXO1104_RS17495;Dbxref=Genbank:WP_011408079.1;Name=WP_011408079.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156980.1;locus_tag=IXO1104_RS17495;product=trehalose-phosphatase;protein_id=WP_011408079.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3777976 3779754 . + . ID=gene-IXO1104_RS17500;Name=IXO1104_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17500;old_locus_tag=IXO1104_17470 NZ_CP047492.1 Protein Homology CDS 3777976 3779754 . + 0 ID=cds-WP_075240478.1;Parent=gene-IXO1104_RS17500;Dbxref=Genbank:WP_075240478.1;Name=WP_075240478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901287.1;locus_tag=IXO1104_RS17500;product=glycoside hydrolase family 15 protein;protein_id=WP_075240478.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3779751 3781118 . + . ID=gene-IXO1104_RS17505;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17505;old_locus_tag=IXO1104_17475 NZ_CP047492.1 Protein Homology CDS 3779751 3781118 . + 0 ID=cds-WP_012444454.1;Parent=gene-IXO1104_RS17505;Dbxref=Genbank:WP_012444454.1;Name=WP_012444454.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156978.1;locus_tag=IXO1104_RS17505;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_012444454.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3781343 3781736 . - . ID=gene-IXO1104_RS17510;Name=IXO1104_RS17510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17510;old_locus_tag=IXO1104_17480;pseudo=true NZ_CP047492.1 Protein Homology CDS 3781343 3781736 . - 0 ID=cds-IXO1104_RS17510;Parent=gene-IXO1104_RS17510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052111.1;locus_tag=IXO1104_RS17510;product=thiol-disulfide oxidoreductase DCC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3781723 3782247 . - . ID=gene-IXO1104_RS17515;Name=IXO1104_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17515;old_locus_tag=IXO1104_17485 NZ_CP047492.1 Protein Homology CDS 3781723 3782247 . - 0 ID=cds-WP_027703285.1;Parent=gene-IXO1104_RS17515;Dbxref=Genbank:WP_027703285.1;Name=WP_027703285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303877.1;locus_tag=IXO1104_RS17515;product=DUF4166 domain-containing protein;protein_id=WP_027703285.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3782250 3783056 . - . ID=gene-IXO1104_RS17520;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=IXO1104_RS17520;old_locus_tag=IXO1104_17490 NZ_CP047492.1 Protein Homology CDS 3782250 3783056 . - 0 ID=cds-WP_012444451.1;Parent=gene-IXO1104_RS17520;Dbxref=Genbank:WP_012444451.1;Name=WP_012444451.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444451.1;locus_tag=IXO1104_RS17520;product=peptidoglycan editing factor PgeF;protein_id=WP_012444451.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3783064 3784059 . - . ID=gene-IXO1104_RS17525;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=IXO1104_RS17525;old_locus_tag=IXO1104_17495 NZ_CP047492.1 Protein Homology CDS 3783064 3784059 . - 0 ID=cds-WP_027703284.1;Parent=gene-IXO1104_RS17525;Dbxref=Genbank:WP_027703284.1;Name=WP_027703284.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408077.1;locus_tag=IXO1104_RS17525;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_027703284.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3784180 3785061 . + . ID=gene-IXO1104_RS17530;Name=IXO1104_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17530;old_locus_tag=IXO1104_17500 NZ_CP047492.1 Protein Homology CDS 3784180 3785061 . + 0 ID=cds-WP_011258370.1;Parent=gene-IXO1104_RS17530;Dbxref=Genbank:WP_011258370.1;Name=WP_011258370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155156.1;locus_tag=IXO1104_RS17530;product=outer membrane protein assembly factor BamD;protein_id=WP_011258370.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3785219 3786859 . - . ID=gene-IXO1104_RS17535;Name=IXO1104_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17535;old_locus_tag=IXO1104_17505 NZ_CP047492.1 Protein Homology CDS 3785219 3786859 . - 0 ID=cds-WP_027703283.1;Parent=gene-IXO1104_RS17535;Dbxref=Genbank:WP_027703283.1;Name=WP_027703283.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915802.1;locus_tag=IXO1104_RS17535;product=NAD+ synthase;protein_id=WP_027703283.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3786957 3787448 . - . ID=gene-IXO1104_RS17540;Name=IXO1104_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17540;old_locus_tag=IXO1104_17510 NZ_CP047492.1 Protein Homology CDS 3786957 3787448 . - 0 ID=cds-WP_027703282.1;Parent=gene-IXO1104_RS17540;Dbxref=Genbank:WP_027703282.1;Name=WP_027703282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165087.1;locus_tag=IXO1104_RS17540;product=hypothetical protein;protein_id=WP_027703282.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3787621 3788496 . - . ID=gene-IXO1104_RS17545;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=IXO1104_RS17545;old_locus_tag=IXO1104_17515 NZ_CP047492.1 Protein Homology CDS 3787621 3788496 . - 0 ID=cds-WP_011258368.1;Parent=gene-IXO1104_RS17545;Dbxref=Genbank:WP_011258368.1;Name=WP_011258368.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812253.1;locus_tag=IXO1104_RS17545;product=succinate--CoA ligase subunit alpha;protein_id=WP_011258368.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3788521 3789690 . - . ID=gene-IXO1104_RS17550;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=IXO1104_RS17550;old_locus_tag=IXO1104_17520 NZ_CP047492.1 Protein Homology CDS 3788521 3789690 . - 0 ID=cds-WP_011258367.1;Parent=gene-IXO1104_RS17550;Dbxref=Genbank:WP_011258367.1;Name=WP_011258367.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183942.1;locus_tag=IXO1104_RS17550;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_011258367.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3789924 3791537 . + . ID=gene-IXO1104_RS17555;Name=IXO1104_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17555;old_locus_tag=IXO1104_17525 NZ_CP047492.1 Protein Homology CDS 3789924 3791537 . + 0 ID=cds-WP_011258366.1;Parent=gene-IXO1104_RS17555;Dbxref=Genbank:WP_011258366.1;Name=WP_011258366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=IXO1104_RS17555;product=HAMP domain-containing histidine kinase;protein_id=WP_011258366.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3791868 3793259 . + . ID=gene-IXO1104_RS17560;Name=IXO1104_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17560;old_locus_tag=IXO1104_17530 NZ_CP047492.1 Protein Homology CDS 3791868 3793259 . + 0 ID=cds-WP_033013168.1;Parent=gene-IXO1104_RS17560;Dbxref=Genbank:WP_033013168.1;Name=WP_033013168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094694.1;locus_tag=IXO1104_RS17560;product=sigma-54 dependent transcriptional regulator;protein_id=WP_033013168.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3793332 3793538 . + . ID=gene-IXO1104_RS17565;Name=IXO1104_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17565;old_locus_tag=IXO1104_17535 NZ_CP047492.1 Protein Homology CDS 3793332 3793538 . + 0 ID=cds-WP_027703281.1;Parent=gene-IXO1104_RS17565;Dbxref=Genbank:WP_027703281.1;Name=WP_027703281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812262.1;locus_tag=IXO1104_RS17565;product=DUF2559 family protein;protein_id=WP_027703281.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3793600 3793761 . + . ID=gene-IXO1104_RS17570;Name=IXO1104_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17570 NZ_CP047492.1 GeneMarkS-2+ CDS 3793600 3793761 . + 0 ID=cds-WP_153296778.1;Parent=gene-IXO1104_RS17570;Dbxref=Genbank:WP_153296778.1;Name=WP_153296778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17570;product=hypothetical protein;protein_id=WP_153296778.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3793831 3794109 . + . ID=gene-IXO1104_RS17575;Name=IXO1104_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17575 NZ_CP047492.1 Protein Homology CDS 3793831 3794109 . + 0 ID=cds-WP_229001933.1;Parent=gene-IXO1104_RS17575;Dbxref=Genbank:WP_229001933.1;Name=WP_229001933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=IXO1104_RS17575;product=Fic family protein;protein_id=WP_229001933.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3794118 3795851 . - . ID=gene-IXO1104_RS17580;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=IXO1104_RS17580;old_locus_tag=IXO1104_17545 NZ_CP047492.1 Protein Homology CDS 3794118 3795851 . - 0 ID=cds-WP_011408072.1;Parent=gene-IXO1104_RS17580;Dbxref=Genbank:WP_011408072.1;Name=WP_011408072.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437606.1;locus_tag=IXO1104_RS17580;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_011408072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3795886 3797385 . - . ID=gene-IXO1104_RS17585;Name=IXO1104_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17585;old_locus_tag=IXO1104_17550 NZ_CP047492.1 Protein Homology CDS 3795886 3797385 . - 0 ID=cds-WP_229002722.1;Parent=gene-IXO1104_RS17585;Dbxref=Genbank:WP_229002722.1;Name=WP_229002722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437605.1;locus_tag=IXO1104_RS17585;product=hypothetical protein;protein_id=WP_229002722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3797382 3798011 . - . ID=gene-IXO1104_RS17590;Name=IXO1104_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17590;old_locus_tag=IXO1104_17555 NZ_CP047492.1 Protein Homology CDS 3797382 3798011 . - 0 ID=cds-WP_011408070.1;Parent=gene-IXO1104_RS17590;Dbxref=Genbank:WP_011408070.1;Name=WP_011408070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408070.1;locus_tag=IXO1104_RS17590;product=hypothetical protein;protein_id=WP_011408070.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3798022 3799611 . - . ID=gene-IXO1104_RS17595;Name=IXO1104_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17595;old_locus_tag=IXO1104_17560 NZ_CP047492.1 Protein Homology CDS 3798022 3799611 . - 0 ID=cds-WP_075240477.1;Parent=gene-IXO1104_RS17595;Dbxref=Genbank:WP_075240477.1;Name=WP_075240477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504322.1;locus_tag=IXO1104_RS17595;product=phosphoethanolamine transferase;protein_id=WP_075240477.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3799746 3800171 . - . ID=gene-IXO1104_RS17600;Name=IXO1104_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17600;old_locus_tag=IXO1104_17565 NZ_CP047492.1 Protein Homology CDS 3799746 3800171 . - 0 ID=cds-WP_011408068.1;Parent=gene-IXO1104_RS17600;Dbxref=Genbank:WP_011408068.1;Name=WP_011408068.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363792.1;locus_tag=IXO1104_RS17600;product=pilin;protein_id=WP_011408068.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3800526 3801785 . + . ID=gene-IXO1104_RS17605;Name=IXO1104_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17605;old_locus_tag=IXO1104_17570 NZ_CP047492.1 Protein Homology CDS 3800526 3801785 . + 0 ID=cds-WP_011408067.1;Parent=gene-IXO1104_RS17605;Dbxref=Genbank:WP_011408067.1;Name=WP_011408067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437601.1;locus_tag=IXO1104_RS17605;product=type II secretion system F family protein;protein_id=WP_011408067.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3801792 3802655 . + . ID=gene-IXO1104_RS17610;Name=IXO1104_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17610;old_locus_tag=IXO1104_17575 NZ_CP047492.1 Protein Homology CDS 3801792 3802655 . + 0 ID=cds-WP_011258358.1;Parent=gene-IXO1104_RS17610;Dbxref=Genbank:WP_011258358.1;Name=WP_011258358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302544.1;locus_tag=IXO1104_RS17610;product=A24 family peptidase;protein_id=WP_011258358.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3802669 3803277 . + . ID=gene-IXO1104_RS17615;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=IXO1104_RS17615;old_locus_tag=IXO1104_17580 NZ_CP047492.1 Protein Homology CDS 3802669 3803277 . + 0 ID=cds-WP_011258357.1;Parent=gene-IXO1104_RS17615;Dbxref=Genbank:WP_011258357.1;Name=WP_011258357.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258357.1;locus_tag=IXO1104_RS17615;product=dephospho-CoA kinase;protein_id=WP_011258357.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3803348 3804667 . + . ID=gene-IXO1104_RS17620;Name=IXO1104_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17620;old_locus_tag=IXO1104_17585 NZ_CP047492.1 Protein Homology CDS 3803348 3804667 . + 0 ID=cds-WP_263113775.1;Parent=gene-IXO1104_RS17620;Dbxref=Genbank:WP_263113775.1;Name=WP_263113775.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17620;product=IS701 family transposase;protein_id=WP_263113775.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3804909 3805871 . + . ID=gene-IXO1104_RS17625;Name=IXO1104_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17625;old_locus_tag=IXO1104_17590 NZ_CP047492.1 Protein Homology CDS 3804909 3805871 . + 0 ID=cds-WP_041182297.1-2;Parent=gene-IXO1104_RS17625;Dbxref=Genbank:WP_041182297.1;Name=WP_041182297.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS17625;product=IS1595 family transposase;protein_id=WP_041182297.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3806308 3806610 . - . ID=gene-IXO1104_RS17630;Name=IXO1104_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17630;old_locus_tag=IXO1104_17595 NZ_CP047492.1 Protein Homology CDS 3806308 3806610 . - 0 ID=cds-WP_158645227.1;Parent=gene-IXO1104_RS17630;Dbxref=Genbank:WP_158645227.1;Name=WP_158645227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026861.2;locus_tag=IXO1104_RS17630;product=hypothetical protein;protein_id=WP_158645227.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3806644 3807600 . - . ID=gene-IXO1104_RS17635;Name=IXO1104_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17635;old_locus_tag=IXO1104_17600 NZ_CP047492.1 Protein Homology CDS 3806644 3807600 . - 0 ID=cds-WP_041182719.1-3;Parent=gene-IXO1104_RS17635;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS17635;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3807839 3809158 . - . ID=gene-IXO1104_RS17640;Name=IXO1104_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17640;old_locus_tag=IXO1104_17605 NZ_CP047492.1 Protein Homology CDS 3807839 3809158 . - 0 ID=cds-WP_151420504.1-2;Parent=gene-IXO1104_RS17640;Dbxref=Genbank:WP_151420504.1;Name=WP_151420504.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17640;product=IS701 family transposase;protein_id=WP_151420504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3809273 3809641 . - . ID=gene-IXO1104_RS17645;Name=IXO1104_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17645;old_locus_tag=IXO1104_17610 NZ_CP047492.1 Protein Homology CDS 3809273 3809641 . - 0 ID=cds-WP_011408064.1;Parent=gene-IXO1104_RS17645;Dbxref=Genbank:WP_011408064.1;Name=WP_011408064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448936.1;locus_tag=IXO1104_RS17645;product=hypothetical protein;protein_id=WP_011408064.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3809647 3811155 . - . ID=gene-IXO1104_RS17650;Name=IXO1104_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17650;old_locus_tag=IXO1104_17615 NZ_CP047492.1 Protein Homology CDS 3809647 3811155 . - 0 ID=cds-WP_075240223.1;Parent=gene-IXO1104_RS17650;Dbxref=Genbank:WP_075240223.1;Name=WP_075240223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258354.1;locus_tag=IXO1104_RS17650;product=RHS repeat-associated core domain-containing protein;protein_id=WP_075240223.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3811157 3811486 . - . ID=gene-IXO1104_RS17655;Name=IXO1104_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17655;old_locus_tag=IXO1104_17620 NZ_CP047492.1 GeneMarkS-2+ CDS 3811157 3811486 . - 0 ID=cds-WP_143685531.1;Parent=gene-IXO1104_RS17655;Dbxref=Genbank:WP_143685531.1;Name=WP_143685531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17655;product=hypothetical protein;protein_id=WP_143685531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3811483 3811782 . - . ID=gene-IXO1104_RS17660;Name=IXO1104_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17660;old_locus_tag=IXO1104_17625 NZ_CP047492.1 GeneMarkS-2+ CDS 3811483 3811782 . - 0 ID=cds-WP_125168747.1;Parent=gene-IXO1104_RS17660;Dbxref=Genbank:WP_125168747.1;Name=WP_125168747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17660;product=hypothetical protein;protein_id=WP_125168747.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3811931 3812899 . - . ID=gene-IXO1104_RS17665;Name=IXO1104_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17665;old_locus_tag=IXO1104_17630 NZ_CP047492.1 Protein Homology CDS 3811931 3812899 . - 0 ID=cds-WP_011258802.1-15;Parent=gene-IXO1104_RS17665;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS17665;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3812951 3813442 . - . ID=gene-IXO1104_RS17670;Name=IXO1104_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17670;old_locus_tag=IXO1104_17635 NZ_CP047492.1 GeneMarkS-2+ CDS 3812951 3813442 . - 0 ID=cds-WP_125168746.1;Parent=gene-IXO1104_RS17670;Dbxref=Genbank:WP_125168746.1;Name=WP_125168746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS17670;product=hypothetical protein;protein_id=WP_125168746.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3813439 3817929 . - . ID=gene-IXO1104_RS17675;Name=IXO1104_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17675;old_locus_tag=IXO1104_17640 NZ_CP047492.1 Protein Homology CDS 3813439 3817929 . - 0 ID=cds-WP_263117721.1;Parent=gene-IXO1104_RS17675;Dbxref=Genbank:WP_263117721.1;Name=WP_263117721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258350.1;locus_tag=IXO1104_RS17675;product=type IV secretion protein Rhs;protein_id=WP_263117721.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3818054 3819089 . - . ID=gene-IXO1104_RS17680;Name=IXO1104_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17680;old_locus_tag=IXO1104_17645 NZ_CP047492.1 Protein Homology CDS 3818259 3819089 . - 0 ID=cds-WP_241846853.1-2;Parent=gene-IXO1104_RS17680;Dbxref=Genbank:WP_241846853.1;Name=WP_241846853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS17680;product=IS5 family transposase;protein_id=WP_241846853.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3818054 3818257 . - 0 ID=cds-WP_241846853.1-2;Parent=gene-IXO1104_RS17680;Dbxref=Genbank:WP_241846853.1;Name=WP_241846853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS17680;product=IS5 family transposase;protein_id=WP_241846853.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3819227 3819559 . + . ID=gene-IXO1104_RS17685;Name=IXO1104_RS17685;end_range=3819559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17685;old_locus_tag=IXO1104_17650;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3819227 3819559 . + 0 ID=cds-IXO1104_RS17685;Parent=gene-IXO1104_RS17685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3819559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17685;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3819571 3820806 . - . ID=gene-IXO1104_RS17690;Name=IXO1104_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17690;old_locus_tag=IXO1104_17655 NZ_CP047492.1 Protein Homology CDS 3819571 3820806 . - 0 ID=cds-WP_069959761.1;Parent=gene-IXO1104_RS17690;Dbxref=Genbank:WP_069959761.1;Name=WP_069959761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS17690;product=ISL3 family transposase;protein_id=WP_069959761.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3820871 3821866 . + . ID=gene-IXO1104_RS17695;Name=IXO1104_RS17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17695;old_locus_tag=IXO1104_17660;partial=true;pseudo=true;start_range=.,3820871 NZ_CP047492.1 Protein Homology CDS 3820871 3821866 . + 0 ID=cds-IXO1104_RS17695;Parent=gene-IXO1104_RS17695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17695;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,3820871;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3821909 3822088 . + . ID=gene-IXO1104_RS17700;Name=IXO1104_RS17700;end_range=3822088,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17700;old_locus_tag=IXO1104_17665;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3821909 3822088 . + 0 ID=cds-IXO1104_RS17700;Parent=gene-IXO1104_RS17700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3822088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS17700;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3822144 3823178 . + . ID=gene-IXO1104_RS17705;Name=IXO1104_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17705;old_locus_tag=IXO1104_17670 NZ_CP047492.1 Protein Homology CDS 3822144 3823178 . + 0 ID=cds-WP_011407587.1-4;Parent=gene-IXO1104_RS17705;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1104_RS17705;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3823196 3823788 . + . ID=gene-IXO1104_RS17710;Name=IXO1104_RS17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17710;old_locus_tag=IXO1104_17675;partial=true;pseudo=true;start_range=.,3823196 NZ_CP047492.1 Protein Homology CDS 3823196 3823788 . + 0 ID=cds-IXO1104_RS17710;Parent=gene-IXO1104_RS17710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS17710;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3823196;transl_table=11 NZ_CP047492.1 RefSeq gene 3823864 3825696 . - . ID=gene-IXO1104_RS17715;Name=IXO1104_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17715;old_locus_tag=IXO1104_17680 NZ_CP047492.1 Protein Homology CDS 3823864 3825696 . - 0 ID=cds-WP_011258344.1;Parent=gene-IXO1104_RS17715;Dbxref=Genbank:WP_011258344.1;Name=WP_011258344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377503.1;locus_tag=IXO1104_RS17715;product=ABC transporter ATP-binding protein/permease;protein_id=WP_011258344.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3825828 3826418 . - . ID=gene-IXO1104_RS17720;Name=IXO1104_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17720;old_locus_tag=IXO1104_17685 NZ_CP047492.1 Protein Homology CDS 3825828 3826418 . - 0 ID=cds-WP_011258343.1;Parent=gene-IXO1104_RS17720;Dbxref=Genbank:WP_011258343.1;Name=WP_011258343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487596.1;locus_tag=IXO1104_RS17720;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_011258343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3826484 3829540 . - . ID=gene-IXO1104_RS17725;Name=IXO1104_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17725;old_locus_tag=IXO1104_17690 NZ_CP047492.1 Protein Homology CDS 3826484 3829540 . - 0 ID=cds-WP_044756980.1;Parent=gene-IXO1104_RS17725;Dbxref=Genbank:WP_044756980.1;Name=WP_044756980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366871.1;locus_tag=IXO1104_RS17725;product=efflux RND transporter permease subunit;protein_id=WP_044756980.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3829537 3830640 . - . ID=gene-IXO1104_RS17730;Name=IXO1104_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17730;old_locus_tag=IXO1104_17695 NZ_CP047492.1 Protein Homology CDS 3829537 3830640 . - 0 ID=cds-WP_011258341.1;Parent=gene-IXO1104_RS17730;Dbxref=Genbank:WP_011258341.1;Name=WP_011258341.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258341.1;locus_tag=IXO1104_RS17730;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011258341.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3830666 3831502 . - . ID=gene-IXO1104_RS17735;Name=IXO1104_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17735;old_locus_tag=IXO1104_17700 NZ_CP047492.1 Protein Homology CDS 3830666 3831502 . - 0 ID=cds-WP_011258340.1;Parent=gene-IXO1104_RS17735;Dbxref=Genbank:WP_011258340.1;Name=WP_011258340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366875.1;locus_tag=IXO1104_RS17735;product=MipA/OmpV family protein;protein_id=WP_011258340.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3831522 3832991 . - . ID=gene-IXO1104_RS17740;Name=IXO1104_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17740;old_locus_tag=IXO1104_17705 NZ_CP047492.1 Protein Homology CDS 3831522 3832991 . - 0 ID=cds-WP_033013597.1;Parent=gene-IXO1104_RS17740;Dbxref=Genbank:WP_033013597.1;Name=WP_033013597.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487588.1;locus_tag=IXO1104_RS17740;product=efflux transporter outer membrane subunit;protein_id=WP_033013597.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3833097 3833786 . + . ID=gene-IXO1104_RS17745;Name=IXO1104_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17745;old_locus_tag=IXO1104_17710 NZ_CP047492.1 Protein Homology CDS 3833097 3833786 . + 0 ID=cds-WP_012444424.1;Parent=gene-IXO1104_RS17745;Dbxref=Genbank:WP_012444424.1;Name=WP_012444424.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408057.1;locus_tag=IXO1104_RS17745;product=response regulator;protein_id=WP_012444424.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3833783 3834976 . + . ID=gene-IXO1104_RS17750;Name=IXO1104_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17750;old_locus_tag=IXO1104_17715 NZ_CP047492.1 Protein Homology CDS 3833783 3834976 . + 0 ID=cds-WP_011258337.1;Parent=gene-IXO1104_RS17750;Dbxref=Genbank:WP_011258337.1;Name=WP_011258337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155809.1;locus_tag=IXO1104_RS17750;product=ATP-binding protein;protein_id=WP_011258337.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3835035 3836300 . - . ID=gene-IXO1104_RS17755;Name=IXO1104_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17755;old_locus_tag=IXO1104_17720 NZ_CP047492.1 Protein Homology CDS 3835035 3836300 . - 0 ID=cds-WP_011258336.1;Parent=gene-IXO1104_RS17755;Dbxref=Genbank:WP_011258336.1;Name=WP_011258336.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487582.1;locus_tag=IXO1104_RS17755;product=cation:proton antiporter;protein_id=WP_011258336.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3836447 3838123 . - . ID=gene-IXO1104_RS17760;Name=IXO1104_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17760;old_locus_tag=IXO1104_17725 NZ_CP047492.1 Protein Homology CDS 3836447 3838123 . - 0 ID=cds-WP_027704126.1;Parent=gene-IXO1104_RS17760;Dbxref=Genbank:WP_027704126.1;Name=WP_027704126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258335.1;locus_tag=IXO1104_RS17760;product=serine hydrolase;protein_id=WP_027704126.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3838065 3838565 . - . ID=gene-IXO1104_RS17765;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=IXO1104_RS17765;old_locus_tag=IXO1104_17730 NZ_CP047492.1 Protein Homology CDS 3838065 3838565 . - 0 ID=cds-WP_075240408.1;Parent=gene-IXO1104_RS17765;Dbxref=Genbank:WP_075240408.1;Name=WP_075240408.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172501.1;locus_tag=IXO1104_RS17765;product=ribonuclease E activity regulator RraA;protein_id=WP_075240408.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3839138 3839971 . + . ID=gene-IXO1104_RS17770;Name=IXO1104_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17770;old_locus_tag=IXO1104_17735 NZ_CP047492.1 Protein Homology CDS 3839138 3839971 . + 0 ID=cds-WP_075240409.1;Parent=gene-IXO1104_RS17770;Dbxref=Genbank:WP_075240409.1;Name=WP_075240409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155814.1;locus_tag=IXO1104_RS17770;product=DUF72 domain-containing protein;protein_id=WP_075240409.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3840030 3840106 . + . ID=gene-IXO1104_RS17775;Name=IXO1104_RS17775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS17775;old_locus_tag=IXO1104_17740 NZ_CP047492.1 cmsearch ncRNA 3840030 3840106 . + . ID=rna-IXO1104_RS17775;Parent=gene-IXO1104_RS17775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17775;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3840030 3840106 . + . ID=exon-IXO1104_RS17775-1;Parent=rna-IXO1104_RS17775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17775;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3840381 3841328 . + . ID=gene-IXO1104_RS17780;Name=IXO1104_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17780;old_locus_tag=IXO1104_17745 NZ_CP047492.1 Protein Homology CDS 3840381 3841328 . + 0 ID=cds-WP_075240407.1;Parent=gene-IXO1104_RS17780;Dbxref=Genbank:WP_075240407.1;Name=WP_075240407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304048.1;locus_tag=IXO1104_RS17780;product=DMT family transporter;protein_id=WP_075240407.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3841516 3842238 . - . ID=gene-IXO1104_RS17785;Name=IXO1104_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17785;old_locus_tag=IXO1104_17750 NZ_CP047492.1 Protein Homology CDS 3841516 3842238 . - 0 ID=cds-WP_075240406.1;Parent=gene-IXO1104_RS17785;Dbxref=Genbank:WP_075240406.1;Name=WP_075240406.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573501.1;locus_tag=IXO1104_RS17785;product=pseudouridine synthase;protein_id=WP_075240406.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3842381 3844777 . - . ID=gene-IXO1104_RS17790;Name=IXO1104_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17790;old_locus_tag=IXO1104_17755 NZ_CP047492.1 Protein Homology CDS 3842381 3844777 . - 0 ID=cds-WP_075240405.1;Parent=gene-IXO1104_RS17790;Dbxref=Genbank:WP_075240405.1;Name=WP_075240405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573503.1;locus_tag=IXO1104_RS17790;product=EAL domain-containing protein;protein_id=WP_075240405.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3845041 3846945 . - . ID=gene-IXO1104_RS17795;Name=IXO1104_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17795;old_locus_tag=IXO1104_17760 NZ_CP047492.1 Protein Homology CDS 3845041 3846945 . - 0 ID=cds-WP_011258329.1;Parent=gene-IXO1104_RS17795;Dbxref=Genbank:WP_011258329.1;Name=WP_011258329.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159026.1;locus_tag=IXO1104_RS17795;product=DEAD/DEAH box helicase;protein_id=WP_011258329.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3847177 3847592 . + . ID=gene-IXO1104_RS17800;Name=IXO1104_RS17800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17800;old_locus_tag=IXO1104_17765;pseudo=true NZ_CP047492.1 Protein Homology CDS 3847177 3847592 . + 0 ID=cds-IXO1104_RS17800;Parent=gene-IXO1104_RS17800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017914609.1;locus_tag=IXO1104_RS17800;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3847622 3848271 . + . ID=gene-IXO1104_RS17805;Name=IXO1104_RS17805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17805;old_locus_tag=IXO1104_17770;pseudo=true NZ_CP047492.1 Protein Homology CDS 3847622 3848271 . + 0 ID=cds-IXO1104_RS17805;Parent=gene-IXO1104_RS17805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169196.1;locus_tag=IXO1104_RS17805;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3848308 3848550 . + . ID=gene-IXO1104_RS17810;Name=IXO1104_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17810;old_locus_tag=IXO1104_17775 NZ_CP047492.1 Protein Homology CDS 3848308 3848550 . + 0 ID=cds-WP_011258326.1;Parent=gene-IXO1104_RS17810;Dbxref=Genbank:WP_011258326.1;Name=WP_011258326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919351.1;locus_tag=IXO1104_RS17810;product=RNA-binding S4 domain-containing protein;protein_id=WP_011258326.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3848547 3848863 . + . ID=gene-IXO1104_RS17815;Name=IXO1104_RS17815;end_range=3848863,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17815;old_locus_tag=IXO1104_17780;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3848547 3848863 . + 0 ID=cds-IXO1104_RS17815;Parent=gene-IXO1104_RS17815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3848863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169195.1;locus_tag=IXO1104_RS17815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3848896 3849297 . - . ID=gene-IXO1104_RS17820;Name=IXO1104_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17820;old_locus_tag=IXO1104_17785 NZ_CP047492.1 Protein Homology CDS 3848896 3849297 . - 0 ID=cds-WP_011258325.1;Parent=gene-IXO1104_RS17820;Dbxref=Genbank:WP_011258325.1;Name=WP_011258325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304051.1;locus_tag=IXO1104_RS17820;product=MAPEG family protein;protein_id=WP_011258325.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3849323 3849856 . - . ID=gene-IXO1104_RS17825;Name=IXO1104_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17825;old_locus_tag=IXO1104_17790 NZ_CP047492.1 Protein Homology CDS 3849323 3849856 . - 0 ID=cds-WP_027704130.1;Parent=gene-IXO1104_RS17825;Dbxref=Genbank:WP_027704130.1;Name=WP_027704130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155824.1;locus_tag=IXO1104_RS17825;product=DUF4019 domain-containing protein;protein_id=WP_027704130.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3850259 3850513 . - . ID=gene-IXO1104_RS17830;Name=IXO1104_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17830;old_locus_tag=IXO1104_17795 NZ_CP047492.1 Protein Homology CDS 3850259 3850513 . - 0 ID=cds-WP_011258323.1;Parent=gene-IXO1104_RS17830;Dbxref=Genbank:WP_011258323.1;Name=WP_011258323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377450.1;locus_tag=IXO1104_RS17830;product=hypothetical protein;protein_id=WP_011258323.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3850592 3851156 . - . ID=gene-IXO1104_RS17835;Name=IXO1104_RS17835;end_range=3851156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17835;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3850592 3851156 . - 0 ID=cds-IXO1104_RS17835;Parent=gene-IXO1104_RS17835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3851156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929315.1;locus_tag=IXO1104_RS17835;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3851245 3852210 . + . ID=gene-IXO1104_RS17840;Name=IXO1104_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17840;old_locus_tag=IXO1104_17810 NZ_CP047492.1 Protein Homology CDS 3851245 3852210 . + 0 ID=cds-WP_115877379.1-2;Parent=gene-IXO1104_RS17840;Dbxref=Genbank:WP_115877379.1;Name=WP_115877379.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS17840;product=IS1595 family transposase;protein_id=WP_115877379.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3852217 3852882 . - . ID=gene-IXO1104_RS17845;Name=IXO1104_RS17845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17845;old_locus_tag=IXO1104_17815;partial=true;pseudo=true;start_range=.,3852217 NZ_CP047492.1 Protein Homology CDS 3852217 3852882 . - 0 ID=cds-IXO1104_RS17845;Parent=gene-IXO1104_RS17845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929315.1;locus_tag=IXO1104_RS17845;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3852217;transl_table=11 NZ_CP047492.1 RefSeq gene 3853029 3854492 . + . ID=gene-IXO1104_RS17850;Name=IXO1104_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17850;old_locus_tag=IXO1104_17820 NZ_CP047492.1 Protein Homology CDS 3853029 3854492 . + 0 ID=cds-WP_075239291.1;Parent=gene-IXO1104_RS17850;Dbxref=Genbank:WP_075239291.1;Name=WP_075239291.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301296.1;locus_tag=IXO1104_RS17850;product=helix-turn-helix domain-containing protein;protein_id=WP_075239291.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3854489 3855034 . + . ID=gene-IXO1104_RS17855;Name=IXO1104_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17855;old_locus_tag=IXO1104_17825 NZ_CP047492.1 Protein Homology CDS 3854489 3855034 . + 0 ID=cds-WP_011258319.1;Parent=gene-IXO1104_RS17855;Dbxref=Genbank:WP_011258319.1;Name=WP_011258319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348043.1;locus_tag=IXO1104_RS17855;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_011258319.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3855291 3856597 . + . ID=gene-IXO1104_RS17860;Name=IXO1104_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17860;old_locus_tag=IXO1104_17830;pseudo=true NZ_CP047492.1 Protein Homology CDS 3855291 3856597 . + 0 ID=cds-IXO1104_RS17860;Parent=gene-IXO1104_RS17860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155829.1;locus_tag=IXO1104_RS17860;product=ectonucleotide pyrophosphatase/phosphodiesterase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3856724 3858169 . + . ID=gene-IXO1104_RS17865;Name=IXO1104_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17865;old_locus_tag=IXO1104_17835 NZ_CP047492.1 Protein Homology CDS 3856724 3858169 . + 0 ID=cds-WP_011258317.1;Parent=gene-IXO1104_RS17865;Dbxref=Genbank:WP_011258317.1;Name=WP_011258317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302096.1;locus_tag=IXO1104_RS17865;product=chloride channel protein;protein_id=WP_011258317.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3858242 3859282 . + . ID=gene-IXO1104_RS17870;Name=IXO1104_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17870;old_locus_tag=IXO1104_17840 NZ_CP047492.1 Protein Homology CDS 3858242 3859282 . + 0 ID=cds-WP_044756986.1;Parent=gene-IXO1104_RS17870;Dbxref=Genbank:WP_044756986.1;Name=WP_044756986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377437.1;locus_tag=IXO1104_RS17870;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_044756986.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3859415 3859597 . - . ID=gene-IXO1104_RS17875;Name=IXO1104_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17875;old_locus_tag=IXO1104_17845 NZ_CP047492.1 Protein Homology CDS 3859415 3859597 . - 0 ID=cds-WP_011408042.1;Parent=gene-IXO1104_RS17875;Dbxref=Genbank:WP_011408042.1;Name=WP_011408042.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487537.1;locus_tag=IXO1104_RS17875;product=30S ribosomal protein THX;protein_id=WP_011408042.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3859897 3860307 . - . ID=gene-IXO1104_RS17880;Name=IXO1104_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17880;old_locus_tag=IXO1104_17850 NZ_CP047492.1 Protein Homology CDS 3859897 3860307 . - 0 ID=cds-WP_011258314.1;Parent=gene-IXO1104_RS17880;Dbxref=Genbank:WP_011258314.1;Name=WP_011258314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366931.1;locus_tag=IXO1104_RS17880;product=MerC domain-containing protein;protein_id=WP_011258314.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3860508 3862545 . + . ID=gene-IXO1104_RS17885;Name=IXO1104_RS17885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17885;old_locus_tag=IXO1104_17855;pseudo=true NZ_CP047492.1 Protein Homology CDS 3860508 3862545 . + 0 ID=cds-IXO1104_RS17885;Parent=gene-IXO1104_RS17885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998312.1;locus_tag=IXO1104_RS17885;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3863043 3864362 . - . ID=gene-IXO1104_RS17890;Name=IXO1104_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17890;old_locus_tag=IXO1104_17860 NZ_CP047492.1 Protein Homology CDS 3863043 3864362 . - 0 ID=cds-WP_011407489.1;Parent=gene-IXO1104_RS17890;Dbxref=Genbank:WP_011407489.1;Name=WP_011407489.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS17890;product=IS701 family transposase;protein_id=WP_011407489.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3864461 3866794 . + . ID=gene-IXO1104_RS17895;Name=IXO1104_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17895;old_locus_tag=IXO1104_17865 NZ_CP047492.1 Protein Homology CDS 3864461 3866794 . + 0 ID=cds-WP_075240731.1;Parent=gene-IXO1104_RS17895;Dbxref=Genbank:WP_075240731.1;Name=WP_075240731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119005.1;locus_tag=IXO1104_RS17895;product=TonB-dependent receptor;protein_id=WP_075240731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3867038 3867994 . - . ID=gene-IXO1104_RS17900;Name=IXO1104_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17900;old_locus_tag=IXO1104_17870 NZ_CP047492.1 Protein Homology CDS 3867038 3867994 . - 0 ID=cds-WP_041182615.1;Parent=gene-IXO1104_RS17900;Dbxref=Genbank:WP_041182615.1;Name=WP_041182615.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS17900;product=IS30 family transposase;protein_id=WP_041182615.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3868046 3868381 . - . ID=gene-IXO1104_RS17905;Name=IXO1104_RS17905;end_range=3868381,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17905;old_locus_tag=IXO1104_17875;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3868046 3868381 . - 0 ID=cds-IXO1104_RS17905;Parent=gene-IXO1104_RS17905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3868381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483598.1;locus_tag=IXO1104_RS17905;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3868555 3869280 . - . ID=gene-IXO1104_RS17910;Name=IXO1104_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17910;old_locus_tag=IXO1104_17880 NZ_CP047492.1 Protein Homology CDS 3868555 3869280 . - 0 ID=cds-WP_012444400.1;Parent=gene-IXO1104_RS17910;Dbxref=Genbank:WP_012444400.1;Name=WP_012444400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155745.1;locus_tag=IXO1104_RS17910;product=OmpA family protein;protein_id=WP_012444400.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3869617 3869693 . + . ID=gene-IXO1104_RS17915;Name=IXO1104_RS17915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS17915;old_locus_tag=IXO1104_17885 NZ_CP047492.1 cmsearch ncRNA 3869617 3869693 . + . ID=rna-IXO1104_RS17915;Parent=gene-IXO1104_RS17915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17915;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3869617 3869693 . + . ID=exon-IXO1104_RS17915-1;Parent=rna-IXO1104_RS17915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS17915;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3869697 3871115 . - . ID=gene-IXO1104_RS17920;Name=IXO1104_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17920;old_locus_tag=IXO1104_17890 NZ_CP047492.1 Protein Homology CDS 3869697 3871115 . - 0 ID=cds-WP_075240704.1;Parent=gene-IXO1104_RS17920;Dbxref=Genbank:WP_075240704.1;Name=WP_075240704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113227.1;locus_tag=IXO1104_RS17920;product=DNA photolyase family protein;protein_id=WP_075240704.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3871218 3872648 . - . ID=gene-IXO1104_RS17925;Name=IXO1104_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17925;old_locus_tag=IXO1104_17895 NZ_CP047492.1 Protein Homology CDS 3871218 3872648 . - 0 ID=cds-WP_011408037.1;Parent=gene-IXO1104_RS17925;Dbxref=Genbank:WP_011408037.1;Name=WP_011408037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006377195.1;locus_tag=IXO1104_RS17925;product=replicative DNA helicase;protein_id=WP_011408037.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3872870 3873424 . - . ID=gene-IXO1104_RS17930;Name=IXO1104_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17930;old_locus_tag=IXO1104_17900 NZ_CP047492.1 Protein Homology CDS 3872870 3873424 . - 0 ID=cds-WP_011258306.1;Parent=gene-IXO1104_RS17930;Dbxref=Genbank:WP_011258306.1;Name=WP_011258306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972091.1;locus_tag=IXO1104_RS17930;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_011258306.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3873641 3875581 . - . ID=gene-IXO1104_RS17935;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=IXO1104_RS17935;old_locus_tag=IXO1104_17905 NZ_CP047492.1 Protein Homology CDS 3873641 3875581 . - 0 ID=cds-WP_011258305.1;Parent=gene-IXO1104_RS17935;Dbxref=Genbank:WP_011258305.1;Name=WP_011258305.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089787.1;locus_tag=IXO1104_RS17935;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_011258305.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3875757 3876395 . - . ID=gene-IXO1104_RS17940;Name=IXO1104_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17940;old_locus_tag=IXO1104_17910 NZ_CP047492.1 Protein Homology CDS 3875757 3876395 . - 0 ID=cds-WP_027704133.1;Parent=gene-IXO1104_RS17940;Dbxref=Genbank:WP_027704133.1;Name=WP_027704133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966694.1;locus_tag=IXO1104_RS17940;product=glutathione S-transferase family protein;protein_id=WP_027704133.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3876521 3878547 . - . ID=gene-IXO1104_RS17945;Name=IXO1104_RS17945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17945;old_locus_tag=IXO1104_17915;pseudo=true NZ_CP047492.1 Protein Homology CDS 3876521 3878547 . - 0 ID=cds-IXO1104_RS17945;Parent=gene-IXO1104_RS17945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171542.1;locus_tag=IXO1104_RS17945;product=DUF3857 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3878629 3879621 . - . ID=gene-IXO1104_RS17950;Name=IXO1104_RS17950;end_range=3879621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17950;old_locus_tag=IXO1104_17920;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3878629 3879621 . - 0 ID=cds-IXO1104_RS17950;Parent=gene-IXO1104_RS17950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016627;end_range=3879621,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988347.1;locus_tag=IXO1104_RS17950;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3879628 3880434 . - . ID=gene-IXO1104_RS17955;Name=IXO1104_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17955;old_locus_tag=IXO1104_17925 NZ_CP047492.1 Protein Homology CDS 3879628 3880434 . - 0 ID=cds-WP_075240727.1-2;Parent=gene-IXO1104_RS17955;Dbxref=Genbank:WP_075240727.1;Name=WP_075240727.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1104_RS17955;product=IS5 family transposase;protein_id=WP_075240727.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3880478 3880663 . - . ID=gene-IXO1104_RS17960;Name=IXO1104_RS17960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS17960;old_locus_tag=IXO1104_17930;partial=true;pseudo=true;start_range=.,3880478 NZ_CP047492.1 Protein Homology CDS 3880478 3880663 . - 0 ID=cds-IXO1104_RS17960;Parent=gene-IXO1104_RS17960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988347.1;locus_tag=IXO1104_RS17960;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,3880478;transl_table=11 NZ_CP047492.1 RefSeq gene 3880809 3881600 . - . ID=gene-IXO1104_RS17965;Name=IXO1104_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17965;old_locus_tag=IXO1104_17935 NZ_CP047492.1 Protein Homology CDS 3880809 3881600 . - 0 ID=cds-WP_012444392.1;Parent=gene-IXO1104_RS17965;Dbxref=Genbank:WP_012444392.1;Name=WP_012444392.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161798.1;locus_tag=IXO1104_RS17965;product=glycine zipper 2TM domain-containing protein;protein_id=WP_012444392.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3881746 3881961 . + . ID=gene-IXO1104_RS17970;Name=IXO1104_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17970;old_locus_tag=IXO1104_17940 NZ_CP047492.1 Protein Homology CDS 3881746 3881961 . + 0 ID=cds-WP_012444391.1;Parent=gene-IXO1104_RS17970;Dbxref=Genbank:WP_012444391.1;Name=WP_012444391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902710.1;locus_tag=IXO1104_RS17970;product=hypothetical protein;protein_id=WP_012444391.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3881961 3882728 . + . ID=gene-IXO1104_RS17975;Name=IXO1104_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17975;old_locus_tag=IXO1104_17945 NZ_CP047492.1 Protein Homology CDS 3881961 3882728 . + 0 ID=cds-WP_012444390.1;Parent=gene-IXO1104_RS17975;Dbxref=Genbank:WP_012444390.1;Name=WP_012444390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444390.1;locus_tag=IXO1104_RS17975;product=TatD family hydrolase;protein_id=WP_012444390.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3882790 3883620 . - . ID=gene-IXO1104_RS17980;Name=IXO1104_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17980;old_locus_tag=IXO1104_17950 NZ_CP047492.1 Protein Homology CDS 3882790 3883620 . - 0 ID=cds-WP_011258297.1;Parent=gene-IXO1104_RS17980;Dbxref=Genbank:WP_011258297.1;Name=WP_011258297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849525.1;locus_tag=IXO1104_RS17980;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_011258297.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3883693 3884121 . + . ID=gene-IXO1104_RS17985;Name=IXO1104_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17985;old_locus_tag=IXO1104_17955 NZ_CP047492.1 Protein Homology CDS 3883693 3884121 . + 0 ID=cds-WP_027704135.1;Parent=gene-IXO1104_RS17985;Dbxref=Genbank:WP_027704135.1;Name=WP_027704135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966688.1;locus_tag=IXO1104_RS17985;product=cytochrome c;protein_id=WP_027704135.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3884253 3884732 . + . ID=gene-IXO1104_RS17990;Name=IXO1104_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17990;old_locus_tag=IXO1104_17960 NZ_CP047492.1 Protein Homology CDS 3884253 3884732 . + 0 ID=cds-WP_011408030.1;Parent=gene-IXO1104_RS17990;Dbxref=Genbank:WP_011408030.1;Name=WP_011408030.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303254.1;locus_tag=IXO1104_RS17990;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011408030.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3884983 3885198 . - . ID=gene-IXO1104_RS17995;Name=IXO1104_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS17995;old_locus_tag=IXO1104_17965 NZ_CP047492.1 Protein Homology CDS 3884983 3885198 . - 0 ID=cds-WP_011258294.1;Parent=gene-IXO1104_RS17995;Dbxref=Genbank:WP_011258294.1;Name=WP_011258294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483561.1;locus_tag=IXO1104_RS17995;product=cold-shock protein;protein_id=WP_011258294.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3885426 3885911 . + . ID=gene-IXO1104_RS18000;Name=IXO1104_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18000;old_locus_tag=IXO1104_17970 NZ_CP047492.1 Protein Homology CDS 3885426 3885911 . + 0 ID=cds-WP_011258293.1;Parent=gene-IXO1104_RS18000;Dbxref=Genbank:WP_011258293.1;Name=WP_011258293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155733.1;locus_tag=IXO1104_RS18000;product=DUF456 domain-containing protein;protein_id=WP_011258293.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3886024 3886218 . + . ID=gene-IXO1104_RS18005;Name=IXO1104_RS18005;end_range=3886218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18005;old_locus_tag=IXO1104_17975;partial=true;pseudo=true;start_range=.,3886024 NZ_CP047492.1 Protein Homology CDS 3886024 3886218 . + 0 ID=cds-IXO1104_RS18005;Parent=gene-IXO1104_RS18005;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3886218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1104_RS18005;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3886024;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3886340 3887287 . + . ID=gene-IXO1104_RS18010;Name=IXO1104_RS18010;end_range=3887287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18010;old_locus_tag=IXO1104_17980;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3886340 3887287 . + 0 ID=cds-IXO1104_RS18010;Parent=gene-IXO1104_RS18010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3887287,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS18010;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3887293 3887457 . - . ID=gene-IXO1104_RS18015;Name=IXO1104_RS18015;end_range=3887457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18015;old_locus_tag=IXO1104_17985;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3887293 3887457 . - 0 ID=cds-IXO1104_RS18015;Parent=gene-IXO1104_RS18015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3887457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS18015;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3887473 3887676 . - . ID=gene-IXO1104_RS18020;Name=IXO1104_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18020;old_locus_tag=IXO1104_17990 NZ_CP047492.1 Protein Homology CDS 3887473 3887676 . - 0 ID=cds-WP_011258291.1;Parent=gene-IXO1104_RS18020;Dbxref=Genbank:WP_011258291.1;Name=WP_011258291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488570.1;locus_tag=IXO1104_RS18020;product=hypothetical protein;protein_id=WP_011258291.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3887899 3888318 . + . ID=gene-IXO1104_RS18025;Name=IXO1104_RS18025;end_range=3888318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18025;old_locus_tag=IXO1104_17995;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3887899 3888318 . + 0 ID=cds-IXO1104_RS18025;Parent=gene-IXO1104_RS18025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3888318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463427.1;locus_tag=IXO1104_RS18025;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3888454 3888912 . - . ID=gene-IXO1104_RS18030;Name=IXO1104_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18030;old_locus_tag=IXO1104_18000 NZ_CP047492.1 Protein Homology CDS 3888454 3888912 . - 0 ID=cds-WP_011408025.1;Parent=gene-IXO1104_RS18030;Dbxref=Genbank:WP_011408025.1;Name=WP_011408025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157164.1;locus_tag=IXO1104_RS18030;product=cupin domain-containing protein;protein_id=WP_011408025.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3889054 3889130 . + . ID=gene-IXO1104_RS18035;Name=IXO1104_RS18035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS18035;old_locus_tag=IXO1104_18005 NZ_CP047492.1 cmsearch ncRNA 3889054 3889130 . + . ID=rna-IXO1104_RS18035;Parent=gene-IXO1104_RS18035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18035;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3889054 3889130 . + . ID=exon-IXO1104_RS18035-1;Parent=rna-IXO1104_RS18035;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18035;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3889318 3889824 . - . ID=gene-IXO1104_RS18040;Name=IXO1104_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18040;old_locus_tag=IXO1104_18010 NZ_CP047492.1 Protein Homology CDS 3889318 3889824 . - 0 ID=cds-WP_011408024.1;Parent=gene-IXO1104_RS18040;Dbxref=Genbank:WP_011408024.1;Name=WP_011408024.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157169.1;locus_tag=IXO1104_RS18040;product=transcriptional repressor;protein_id=WP_011408024.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3889838 3891241 . - . ID=gene-IXO1104_RS18045;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=IXO1104_RS18045;old_locus_tag=IXO1104_18015 NZ_CP047492.1 Protein Homology CDS 3889838 3891241 . - 0 ID=cds-WP_011258289.1;Parent=gene-IXO1104_RS18045;Dbxref=Genbank:WP_011258289.1;Name=WP_011258289.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237481.1;locus_tag=IXO1104_RS18045;product=glutamate--tRNA ligase;protein_id=WP_011258289.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3891310 3891957 . - . ID=gene-IXO1104_RS18050;Name=IXO1104_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18050 NZ_CP047492.1 Protein Homology CDS 3891310 3891957 . - 0 ID=cds-WP_241846815.1;Parent=gene-IXO1104_RS18050;Dbxref=Genbank:WP_241846815.1;Name=WP_241846815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023695.2;locus_tag=IXO1104_RS18050;product=DUF3616 domain-containing protein;protein_id=WP_241846815.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3891849 3892367 . - . ID=gene-IXO1104_RS18055;Name=IXO1104_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18055 NZ_CP047492.1 Protein Homology CDS 3891849 3892367 . - 0 ID=cds-WP_241846816.1;Parent=gene-IXO1104_RS18055;Dbxref=Genbank:WP_241846816.1;Name=WP_241846816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258287.1;locus_tag=IXO1104_RS18055;product=DUF3616 domain-containing protein;protein_id=WP_241846816.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3892431 3893315 . - . ID=gene-IXO1104_RS18060;Name=IXO1104_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18060;old_locus_tag=IXO1104_18025 NZ_CP047492.1 Protein Homology CDS 3892431 3893315 . - 0 ID=cds-WP_075240473.1;Parent=gene-IXO1104_RS18060;Dbxref=Genbank:WP_075240473.1;Name=WP_075240473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444381.1;locus_tag=IXO1104_RS18060;product=carbon-nitrogen hydrolase family protein;protein_id=WP_075240473.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3893433 3893996 . - . ID=gene-IXO1104_RS18065;Name=IXO1104_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18065;old_locus_tag=IXO1104_18030 NZ_CP047492.1 Protein Homology CDS 3893433 3893996 . - 0 ID=cds-WP_103073530.1;Parent=gene-IXO1104_RS18065;Dbxref=Genbank:WP_103073530.1;Name=WP_103073530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576094.1;locus_tag=IXO1104_RS18065;product=GNAT family acetyltransferase;protein_id=WP_103073530.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3894252 3895064 . + . ID=gene-IXO1104_RS18070;Name=IXO1104_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18070;old_locus_tag=IXO1104_18035 NZ_CP047492.1 Protein Homology CDS 3894252 3895064 . + 0 ID=cds-WP_069960179.1;Parent=gene-IXO1104_RS18070;Dbxref=Genbank:WP_069960179.1;Name=WP_069960179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051873.1;locus_tag=IXO1104_RS18070;product=C1 family peptidase;protein_id=WP_069960179.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3895257 3896258 . - . ID=gene-IXO1104_RS18075;Name=IXO1104_RS18075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18075;old_locus_tag=IXO1104_18040;partial=true;pseudo=true;start_range=.,3895257 NZ_CP047492.1 Protein Homology CDS 3895257 3896258 . - 0 ID=cds-IXO1104_RS18075;Parent=gene-IXO1104_RS18075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=IXO1104_RS18075;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3895257;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3896227 3896327 . - . ID=gene-IXO1104_RS18080;Name=IXO1104_RS18080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18080;partial=true;pseudo=true;start_range=.,3896227 NZ_CP047492.1 Protein Homology CDS 3896227 3896327 . - 0 ID=cds-IXO1104_RS18080;Parent=gene-IXO1104_RS18080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971608.1;locus_tag=IXO1104_RS18080;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,3896227;transl_table=11 NZ_CP047492.1 RefSeq gene 3896426 3896809 . - . ID=gene-IXO1104_RS18085;Name=IXO1104_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18085;old_locus_tag=IXO1104_18050 NZ_CP047492.1 Protein Homology CDS 3896426 3896809 . - 0 ID=cds-WP_011408018.1;Parent=gene-IXO1104_RS18085;Dbxref=Genbank:WP_011408018.1;Name=WP_011408018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=IXO1104_RS18085;product=inner membrane CreD family protein;protein_id=WP_011408018.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3897325 3898137 . + . ID=gene-IXO1104_RS18090;Name=IXO1104_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18090;old_locus_tag=IXO1104_18055 NZ_CP047492.1 Protein Homology CDS 3897325 3898137 . + 0 ID=cds-WP_011258280.1;Parent=gene-IXO1104_RS18090;Dbxref=Genbank:WP_011258280.1;Name=WP_011258280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157176.1;locus_tag=IXO1104_RS18090;product=C1 family peptidase;protein_id=WP_011258280.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3898198 3899256 . + . ID=gene-IXO1104_RS18095;Name=IXO1104_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18095;old_locus_tag=IXO1104_18060 NZ_CP047492.1 Protein Homology CDS 3898198 3899256 . + 0 ID=cds-WP_117231579.1;Parent=gene-IXO1104_RS18095;Dbxref=Genbank:WP_117231579.1;Name=WP_117231579.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=IXO1104_RS18095;product=IS630 family transposase;protein_id=WP_117231579.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3899419 3900421 . - . ID=gene-IXO1104_RS18100;Name=IXO1104_RS18100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18100;old_locus_tag=IXO1104_18065;partial=true;pseudo=true;start_range=.,3899419 NZ_CP047492.1 Protein Homology CDS 3899419 3900421 . - 0 ID=cds-IXO1104_RS18100;Parent=gene-IXO1104_RS18100;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=IXO1104_RS18100;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3899419;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3900390 3900526 . - . ID=gene-IXO1104_RS18105;Name=IXO1104_RS18105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18105;partial=true;pseudo=true;start_range=.,3900390 NZ_CP047492.1 Protein Homology CDS 3900390 3900526 . - 0 ID=cds-IXO1104_RS18105;Parent=gene-IXO1104_RS18105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159908.1;locus_tag=IXO1104_RS18105;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,3900390;transl_table=11 NZ_CP047492.1 RefSeq gene 3900571 3900957 . - . ID=gene-IXO1104_RS18110;Name=IXO1104_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18110;old_locus_tag=IXO1104_18075 NZ_CP047492.1 Protein Homology CDS 3900571 3900957 . - 0 ID=cds-WP_075240373.1;Parent=gene-IXO1104_RS18110;Dbxref=Genbank:WP_075240373.1;Name=WP_075240373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=IXO1104_RS18110;product=inner membrane CreD family protein;protein_id=WP_075240373.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3901689 3902501 . + . ID=gene-IXO1104_RS18115;Name=IXO1104_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18115;old_locus_tag=IXO1104_18080 NZ_CP047492.1 Protein Homology CDS 3901689 3902501 . + 0 ID=cds-WP_075240355.1;Parent=gene-IXO1104_RS18115;Dbxref=Genbank:WP_075240355.1;Name=WP_075240355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051873.1;locus_tag=IXO1104_RS18115;product=C1 family peptidase;protein_id=WP_075240355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3902521 3903555 . - . ID=gene-IXO1104_RS18120;Name=IXO1104_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18120;old_locus_tag=IXO1104_18085 NZ_CP047492.1 Protein Homology CDS 3902521 3903555 . - 0 ID=cds-WP_117231580.1;Parent=gene-IXO1104_RS18120;Dbxref=Genbank:WP_117231580.1;Name=WP_117231580.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1104_RS18120;product=IS630 family transposase;protein_id=WP_117231580.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3903711 3904403 . - . ID=gene-IXO1104_RS18125;Name=IXO1104_RS18125;end_range=3904403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18125;old_locus_tag=IXO1104_18090;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3903711 3904403 . - 0 ID=cds-IXO1104_RS18125;Parent=gene-IXO1104_RS18125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3904403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090630.1;locus_tag=IXO1104_RS18125;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3904499 3905734 . + . ID=gene-IXO1104_RS18130;Name=IXO1104_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18130;old_locus_tag=IXO1104_18095 NZ_CP047492.1 Protein Homology CDS 3904499 3905734 . + 0 ID=cds-WP_012445794.1-3;Parent=gene-IXO1104_RS18130;Dbxref=Genbank:WP_012445794.1;Name=WP_012445794.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS18130;product=ISL3 family transposase;protein_id=WP_012445794.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3905909 3906019 . - . ID=gene-IXO1104_RS18135;Name=IXO1104_RS18135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18135;old_locus_tag=IXO1104_18100;partial=true;pseudo=true;start_range=.,3905909 NZ_CP047492.1 Protein Homology CDS 3905909 3906019 . - 0 ID=cds-IXO1104_RS18135;Parent=gene-IXO1104_RS18135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902310.1;locus_tag=IXO1104_RS18135;partial=true;product=two-component system response regulator CreB;pseudo=true;start_range=.,3905909;transl_table=11 NZ_CP047492.1 RefSeq gene 3906186 3907094 . + . ID=gene-IXO1104_RS18140;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS18140;old_locus_tag=IXO1104_18105 NZ_CP047492.1 Protein Homology CDS 3906186 3907094 . + 0 ID=cds-WP_011408011.1;Parent=gene-IXO1104_RS18140;Dbxref=Genbank:WP_011408011.1;Name=WP_011408011.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919277.1;locus_tag=IXO1104_RS18140;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_011408011.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3907506 3908048 . + . ID=gene-IXO1104_RS18145;Name=IXO1104_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18145;old_locus_tag=IXO1104_18110 NZ_CP047492.1 Protein Homology CDS 3907506 3908048 . + 0 ID=cds-WP_011258270.1;Parent=gene-IXO1104_RS18145;Dbxref=Genbank:WP_011258270.1;Name=WP_011258270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301140.1;locus_tag=IXO1104_RS18145;product=GNAT family N-acetyltransferase;protein_id=WP_011258270.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3908451 3911915 . + . ID=gene-IXO1104_RS18150;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=IXO1104_RS18150;old_locus_tag=IXO1104_18115 NZ_CP047492.1 Protein Homology CDS 3908451 3911915 . + 0 ID=cds-WP_012444366.1;Parent=gene-IXO1104_RS18150;Dbxref=Genbank:WP_012444366.1;Name=WP_012444366.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090633.1;locus_tag=IXO1104_RS18150;product=transcription-repair coupling factor;protein_id=WP_012444366.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3912147 3912365 . - . ID=gene-IXO1104_RS18155;Name=IXO1104_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18155;old_locus_tag=IXO1104_18120 NZ_CP047492.1 GeneMarkS-2+ CDS 3912147 3912365 . - 0 ID=cds-WP_128415371.1;Parent=gene-IXO1104_RS18155;Dbxref=Genbank:WP_128415371.1;Name=WP_128415371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18155;product=hypothetical protein;protein_id=WP_128415371.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3912405 3912734 . + . ID=gene-IXO1104_RS18160;Name=IXO1104_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18160;old_locus_tag=IXO1104_18125 NZ_CP047492.1 Protein Homology CDS 3912405 3912734 . + 0 ID=cds-WP_011258268.1;Parent=gene-IXO1104_RS18160;Dbxref=Genbank:WP_011258268.1;Name=WP_011258268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905011.1;locus_tag=IXO1104_RS18160;product=STAS domain-containing protein;protein_id=WP_011258268.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3912753 3914774 . + . ID=gene-IXO1104_RS18165;Name=IXO1104_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18165;old_locus_tag=IXO1104_18130 NZ_CP047492.1 Protein Homology CDS 3912753 3914774 . + 0 ID=cds-WP_011258267.1;Parent=gene-IXO1104_RS18165;Dbxref=Genbank:WP_011258267.1;Name=WP_011258267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576106.1;locus_tag=IXO1104_RS18165;product=chemotaxis protein CheA;protein_id=WP_011258267.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3914843 3917005 . + . ID=gene-IXO1104_RS18170;Name=IXO1104_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18170;old_locus_tag=IXO1104_18135 NZ_CP047492.1 Protein Homology CDS 3914843 3917005 . + 0 ID=cds-WP_027703636.1;Parent=gene-IXO1104_RS18170;Dbxref=Genbank:WP_027703636.1;Name=WP_027703636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971660.1;locus_tag=IXO1104_RS18170;product=methyl-accepting chemotaxis protein;protein_id=WP_027703636.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3917016 3917531 . + . ID=gene-IXO1104_RS18175;Name=IXO1104_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18175;old_locus_tag=IXO1104_18140 NZ_CP047492.1 Protein Homology CDS 3917016 3917531 . + 0 ID=cds-WP_011258265.1;Parent=gene-IXO1104_RS18175;Dbxref=Genbank:WP_011258265.1;Name=WP_011258265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502619.1;locus_tag=IXO1104_RS18175;product=chemotaxis protein CheW;protein_id=WP_011258265.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3917558 3918841 . + . ID=gene-IXO1104_RS18180;Name=IXO1104_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18180;old_locus_tag=IXO1104_18145 NZ_CP047492.1 Protein Homology CDS 3917558 3918841 . + 0 ID=cds-WP_027703637.1;Parent=gene-IXO1104_RS18180;Dbxref=Genbank:WP_027703637.1;Name=WP_027703637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375512.1;locus_tag=IXO1104_RS18180;product=EAL domain-containing response regulator;protein_id=WP_027703637.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3918846 3919652 . + . ID=gene-IXO1104_RS18185;Name=IXO1104_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18185;old_locus_tag=IXO1104_18150 NZ_CP047492.1 Protein Homology CDS 3918846 3919652 . + 0 ID=cds-WP_012444362.1;Parent=gene-IXO1104_RS18185;Dbxref=Genbank:WP_012444362.1;Name=WP_012444362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301146.1;locus_tag=IXO1104_RS18185;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_012444362.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3919649 3920788 . + . ID=gene-IXO1104_RS18190;Name=IXO1104_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18190;old_locus_tag=IXO1104_18155 NZ_CP047492.1 Protein Homology CDS 3919649 3920788 . + 0 ID=cds-WP_012444361.1;Parent=gene-IXO1104_RS18190;Dbxref=Genbank:WP_012444361.1;Name=WP_012444361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971662.1;locus_tag=IXO1104_RS18190;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_012444361.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3920957 3922517 . - . ID=gene-IXO1104_RS18195;Name=IXO1104_RS18195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18195;old_locus_tag=IXO1104_18160;pseudo=true NZ_CP047492.1 Protein Homology CDS 3920957 3922517 . - 0 ID=cds-IXO1104_RS18195;Parent=gene-IXO1104_RS18195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051886.1;locus_tag=IXO1104_RS18195;product=phospholipase D family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3922736 3924793 . - . ID=gene-IXO1104_RS18200;Name=IXO1104_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18200;old_locus_tag=IXO1104_18165 NZ_CP047492.1 Protein Homology CDS 3922736 3924793 . - 0 ID=cds-WP_075239012.1;Parent=gene-IXO1104_RS18200;Dbxref=Genbank:WP_075239012.1;Name=WP_075239012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408003.1;locus_tag=IXO1104_RS18200;product=M13 family peptidase;protein_id=WP_075239012.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3925137 3925391 . - . ID=gene-IXO1104_RS18205;Name=IXO1104_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18205;old_locus_tag=IXO1104_18170 NZ_CP047492.1 Protein Homology CDS 3925137 3925391 . - 0 ID=cds-WP_103057495.1;Parent=gene-IXO1104_RS18205;Dbxref=Genbank:WP_103057495.1;Name=WP_103057495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112229.1;locus_tag=IXO1104_RS18205;product=hypothetical protein;protein_id=WP_103057495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3925470 3925545 . + . ID=gene-IXO1104_RS18210;Name=IXO1104_RS18210;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS18210;old_locus_tag=IXO1104_18175 NZ_CP047492.1 cmsearch ncRNA 3925470 3925545 . + . ID=rna-IXO1104_RS18210;Parent=gene-IXO1104_RS18210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18210;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 3925470 3925545 . + . ID=exon-IXO1104_RS18210-1;Parent=rna-IXO1104_RS18210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18210;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 3925740 3926489 . - . ID=gene-IXO1104_RS18215;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18215;old_locus_tag=IXO1104_18180 NZ_CP047492.1 Protein Homology CDS 3925740 3926489 . - 0 ID=cds-WP_012444355.1;Parent=gene-IXO1104_RS18215;Dbxref=Genbank:WP_012444355.1;Name=WP_012444355.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167506.1;locus_tag=IXO1104_RS18215;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_012444355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3926593 3927306 . + . ID=gene-IXO1104_RS18220;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=IXO1104_RS18220;old_locus_tag=IXO1104_18185 NZ_CP047492.1 Protein Homology CDS 3926593 3927306 . + 0 ID=cds-WP_012444354.1;Parent=gene-IXO1104_RS18220;Dbxref=Genbank:WP_012444354.1;Name=WP_012444354.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444354.1;locus_tag=IXO1104_RS18220;product=deoxyribonuclease V;protein_id=WP_012444354.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3927630 3927890 . + . ID=gene-IXO1104_RS18225;Name=IXO1104_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18225;old_locus_tag=IXO1104_18190 NZ_CP047492.1 GeneMarkS-2+ CDS 3927630 3927890 . + 0 ID=cds-WP_075241283.1;Parent=gene-IXO1104_RS18225;Dbxref=Genbank:WP_075241283.1;Name=WP_075241283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18225;product=hypothetical protein;protein_id=WP_075241283.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3928068 3928958 . + . ID=gene-IXO1104_RS18230;Name=IXO1104_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18230;old_locus_tag=IXO1104_18195 NZ_CP047492.1 Protein Homology CDS 3928068 3928958 . + 0 ID=cds-WP_012444353.1;Parent=gene-IXO1104_RS18230;Dbxref=Genbank:WP_012444353.1;Name=WP_012444353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375490.1;locus_tag=IXO1104_RS18230;product=pirin family protein;protein_id=WP_012444353.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3929205 3929666 . + . ID=gene-IXO1104_RS18235;Name=IXO1104_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18235;old_locus_tag=IXO1104_18200 NZ_CP047492.1 Protein Homology CDS 3929205 3929666 . + 0 ID=cds-WP_011407999.1;Parent=gene-IXO1104_RS18235;Dbxref=Genbank:WP_011407999.1;Name=WP_011407999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488124.1;locus_tag=IXO1104_RS18235;product=hypothetical protein;protein_id=WP_011407999.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3929998 3932406 . - . ID=gene-IXO1104_RS18240;Name=IXO1104_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18240;old_locus_tag=IXO1104_18205 NZ_CP047492.1 Protein Homology CDS 3929998 3932406 . - 0 ID=cds-WP_075240713.1;Parent=gene-IXO1104_RS18240;Dbxref=Genbank:WP_075240713.1;Name=WP_075240713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502594.1;locus_tag=IXO1104_RS18240;product=DUF2235 domain-containing protein;protein_id=WP_075240713.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3932403 3932636 . - . ID=gene-IXO1104_RS18245;Name=IXO1104_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18245;old_locus_tag=IXO1104_18210 NZ_CP047492.1 Protein Homology CDS 3932403 3932636 . - 0 ID=cds-WP_011258251.1;Parent=gene-IXO1104_RS18245;Dbxref=Genbank:WP_011258251.1;Name=WP_011258251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502589.1;locus_tag=IXO1104_RS18245;product=DUF3304 domain-containing protein;protein_id=WP_011258251.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3932994 3933956 . - . ID=gene-IXO1104_RS18250;Name=IXO1104_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18250;old_locus_tag=IXO1104_18215 NZ_CP047492.1 Protein Homology CDS 3932994 3933956 . - 0 ID=cds-WP_011409456.1-2;Parent=gene-IXO1104_RS18250;Dbxref=Genbank:WP_011409456.1;Name=WP_011409456.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS18250;product=IS1595 family transposase;protein_id=WP_011409456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3934180 3934758 . - . ID=gene-IXO1104_RS18255;Name=IXO1104_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18255;old_locus_tag=IXO1104_18220 NZ_CP047492.1 GeneMarkS-2+ CDS 3934180 3934758 . - 0 ID=cds-WP_075239675.1;Parent=gene-IXO1104_RS18255;Dbxref=Genbank:WP_075239675.1;Name=WP_075239675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18255;product=DUF3304 domain-containing protein;protein_id=WP_075239675.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3934827 3935735 . - . ID=gene-IXO1104_RS18260;Name=IXO1104_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18260;old_locus_tag=IXO1104_18225 NZ_CP047492.1 Protein Homology CDS 3934827 3935735 . - 0 ID=cds-WP_011407982.1;Parent=gene-IXO1104_RS18260;Dbxref=Genbank:WP_011407982.1;Name=WP_011407982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=IXO1104_RS18260;product=DUF4123 domain-containing protein;protein_id=WP_011407982.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3935742 3938168 . - . ID=gene-IXO1104_RS18265;Name=IXO1104_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18265;old_locus_tag=IXO1104_18230 NZ_CP047492.1 Protein Homology CDS 3935742 3938168 . - 0 ID=cds-WP_117231581.1;Parent=gene-IXO1104_RS18265;Dbxref=Genbank:WP_117231581.1;Name=WP_117231581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407986.1;locus_tag=IXO1104_RS18265;product=type VI secretion system tip protein VgrG;protein_id=WP_117231581.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3938178 3939596 . - . ID=gene-IXO1104_RS18270;Name=IXO1104_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18270;old_locus_tag=IXO1104_18235 NZ_CP047492.1 Protein Homology CDS 3938178 3939596 . - 0 ID=cds-WP_228329700.1;Parent=gene-IXO1104_RS18270;Dbxref=Genbank:WP_228329700.1;Name=WP_228329700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502397.1;locus_tag=IXO1104_RS18270;product=DUF2235 domain-containing protein;protein_id=WP_228329700.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3939580 3940158 . - . ID=gene-IXO1104_RS18275;Name=IXO1104_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18275;old_locus_tag=IXO1104_18240 NZ_CP047492.1 GeneMarkS-2+ CDS 3939580 3940158 . - 0 ID=cds-WP_075241467.1;Parent=gene-IXO1104_RS18275;Dbxref=Genbank:WP_075241467.1;Name=WP_075241467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18275;product=DUF3304 domain-containing protein;protein_id=WP_075241467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3940227 3941135 . - . ID=gene-IXO1104_RS18280;Name=IXO1104_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18280;old_locus_tag=IXO1104_18245 NZ_CP047492.1 Protein Homology CDS 3940227 3941135 . - 0 ID=cds-WP_011407982.1-2;Parent=gene-IXO1104_RS18280;Dbxref=Genbank:WP_011407982.1;Name=WP_011407982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=IXO1104_RS18280;product=DUF4123 domain-containing protein;protein_id=WP_011407982.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3941142 3943811 . - . ID=gene-IXO1104_RS18285;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=IXO1104_RS18285;old_locus_tag=IXO1104_18250 NZ_CP047492.1 Protein Homology CDS 3941142 3943811 . - 0 ID=cds-WP_263117722.1;Parent=gene-IXO1104_RS18285;Dbxref=Genbank:WP_263117722.1;Name=WP_263117722.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=vgrG;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409214.1;locus_tag=IXO1104_RS18285;product=type VI secretion system tip protein VgrG;protein_id=WP_263117722.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3943997 3944959 . + . ID=gene-IXO1104_RS18290;Name=IXO1104_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18290;old_locus_tag=IXO1104_18255 NZ_CP047492.1 Protein Homology CDS 3943997 3944959 . + 0 ID=cds-WP_041182245.1;Parent=gene-IXO1104_RS18290;Dbxref=Genbank:WP_041182245.1;Name=WP_041182245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444336.1;locus_tag=IXO1104_RS18290;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_041182245.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3945012 3947960 . - . ID=gene-IXO1104_RS18295;Name=IXO1104_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18295;old_locus_tag=IXO1104_18260 NZ_CP047492.1 Protein Homology CDS 3945012 3947960 . - 0 ID=cds-WP_241846817.1;Parent=gene-IXO1104_RS18295;Dbxref=Genbank:WP_241846817.1;Name=WP_241846817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801754.1;locus_tag=IXO1104_RS18295;product=DNA repair protein;protein_id=WP_241846817.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3948064 3948668 . - . ID=gene-IXO1104_RS18300;Name=IXO1104_RS18300;end_range=3948668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18300;old_locus_tag=IXO1104_18265;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3948064 3948668 . - 0 ID=cds-IXO1104_RS18300;Parent=gene-IXO1104_RS18300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3948668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444332.1;locus_tag=IXO1104_RS18300;partial=true;product=DUF2345 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3948691 3950523 . - . ID=gene-IXO1104_RS18305;Name=IXO1104_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18305;old_locus_tag=IXO1104_18270 NZ_CP047492.1 Protein Homology CDS 3948691 3950523 . - 0 ID=cds-WP_011259970.1;Parent=gene-IXO1104_RS18305;Dbxref=Genbank:WP_011259970.1;Name=WP_011259970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264907.1;locus_tag=IXO1104_RS18305;product=DUF2235 domain-containing protein;protein_id=WP_011259970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3950520 3950999 . - . ID=gene-IXO1104_RS18310;Name=IXO1104_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18310;old_locus_tag=IXO1104_18275 NZ_CP047492.1 Protein Homology CDS 3950520 3950999 . - 0 ID=cds-WP_011409218.1;Parent=gene-IXO1104_RS18310;Dbxref=Genbank:WP_011409218.1;Name=WP_011409218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409219.1;locus_tag=IXO1104_RS18310;product=DUF3304 domain-containing protein;protein_id=WP_011409218.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3951023 3951487 . - . ID=gene-IXO1104_RS18315;Name=IXO1104_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18315;old_locus_tag=IXO1104_18280 NZ_CP047492.1 Protein Homology CDS 3951023 3951487 . - 0 ID=cds-WP_011259972.1;Parent=gene-IXO1104_RS18315;Dbxref=Genbank:WP_011259972.1;Name=WP_011259972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=IXO1104_RS18315;product=DUF3304 domain-containing protein;protein_id=WP_011259972.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3951484 3951807 . - . ID=gene-IXO1104_RS18320;Name=IXO1104_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18320;old_locus_tag=IXO1104_18285 NZ_CP047492.1 GeneMarkS-2+ CDS 3951484 3951807 . - 0 ID=cds-WP_048485619.1;Parent=gene-IXO1104_RS18320;Dbxref=Genbank:WP_048485619.1;Name=WP_048485619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18320;product=hypothetical protein;protein_id=WP_048485619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3951804 3952283 . - . ID=gene-IXO1104_RS18325;Name=IXO1104_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18325;old_locus_tag=IXO1104_18290 NZ_CP047492.1 Protein Homology CDS 3951804 3952283 . - 0 ID=cds-WP_011409219.1;Parent=gene-IXO1104_RS18325;Dbxref=Genbank:WP_011409219.1;Name=WP_011409219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409219.1;locus_tag=IXO1104_RS18325;product=DUF3304 domain-containing protein;protein_id=WP_011409219.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3952307 3952771 . - . ID=gene-IXO1104_RS18330;Name=IXO1104_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18330;old_locus_tag=IXO1104_18295 NZ_CP047492.1 Protein Homology CDS 3952307 3952771 . - 0 ID=cds-WP_075240218.1;Parent=gene-IXO1104_RS18330;Dbxref=Genbank:WP_075240218.1;Name=WP_075240218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=IXO1104_RS18330;product=DUF3304 domain-containing protein;protein_id=WP_075240218.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3952768 3953649 . - . ID=gene-IXO1104_RS18335;Name=IXO1104_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18335;old_locus_tag=IXO1104_18300 NZ_CP047492.1 Protein Homology CDS 3952768 3953649 . - 0 ID=cds-WP_229001898.1;Parent=gene-IXO1104_RS18335;Dbxref=Genbank:WP_229001898.1;Name=WP_229001898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801745.1;locus_tag=IXO1104_RS18335;product=DUF4123 domain-containing protein;protein_id=WP_229001898.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3953664 3956480 . - . ID=gene-IXO1104_RS18340;Name=IXO1104_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18340;old_locus_tag=IXO1104_18305 NZ_CP047492.1 Protein Homology CDS 3953664 3956480 . - 0 ID=cds-WP_164994154.1;Parent=gene-IXO1104_RS18340;Dbxref=Genbank:WP_164994154.1;Name=WP_164994154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409222.1;locus_tag=IXO1104_RS18340;product=type VI secretion system tip protein VgrG;protein_id=WP_164994154.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3956601 3956819 . - . ID=gene-IXO1104_RS18345;Name=IXO1104_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18345;old_locus_tag=IXO1104_18310 NZ_CP047492.1 GeneMarkS-2+ CDS 3956601 3956819 . - 0 ID=cds-WP_228329634.1;Parent=gene-IXO1104_RS18345;Dbxref=Genbank:WP_228329634.1;Name=WP_228329634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18345;product=hypothetical protein;protein_id=WP_228329634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3957430 3958503 . + . ID=gene-IXO1104_RS18350;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18350;old_locus_tag=IXO1104_18315 NZ_CP047492.1 Protein Homology CDS 3957430 3958503 . + 0 ID=cds-WP_011409224.1;Parent=gene-IXO1104_RS18350;Dbxref=Genbank:WP_011409224.1;Name=WP_011409224.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471063.1;locus_tag=IXO1104_RS18350;product=type VI secretion system protein TssA;protein_id=WP_011409224.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3958556 3959374 . - . ID=gene-IXO1104_RS18355;Name=IXO1104_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18355;old_locus_tag=IXO1104_18320 NZ_CP047492.1 Protein Homology CDS 3958556 3959374 . - 0 ID=cds-WP_069964784.1;Parent=gene-IXO1104_RS18355;Dbxref=Genbank:WP_069964784.1;Name=WP_069964784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444331.1;locus_tag=IXO1104_RS18355;product=OmpA family protein;protein_id=WP_069964784.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3959371 3960354 . - . ID=gene-IXO1104_RS18360;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=IXO1104_RS18360;old_locus_tag=IXO1104_18325 NZ_CP047492.1 Protein Homology CDS 3959371 3960354 . - 0 ID=cds-WP_075240552.1;Parent=gene-IXO1104_RS18360;Dbxref=Genbank:WP_075240552.1;Name=WP_075240552.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259979.1;locus_tag=IXO1104_RS18360;product=type VI secretion system-associated protein TagF;protein_id=WP_075240552.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3960351 3964088 . - . ID=gene-IXO1104_RS18365;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=IXO1104_RS18365;old_locus_tag=IXO1104_18330 NZ_CP047492.1 Protein Homology CDS 3960351 3964088 . - 0 ID=cds-WP_069964588.1;Parent=gene-IXO1104_RS18365;Dbxref=Genbank:WP_069964588.1;Name=WP_069964588.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801812.1;locus_tag=IXO1104_RS18365;product=type VI secretion system membrane subunit TssM;protein_id=WP_069964588.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3964104 3965585 . - . ID=gene-IXO1104_RS18370;Name=IXO1104_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18370;old_locus_tag=IXO1104_18335 NZ_CP047492.1 Protein Homology CDS 3964104 3965585 . - 0 ID=cds-WP_012444329.1;Parent=gene-IXO1104_RS18370;Dbxref=Genbank:WP_012444329.1;Name=WP_012444329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444329.1;locus_tag=IXO1104_RS18370;product=hypothetical protein;protein_id=WP_012444329.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3965645 3965905 . - . ID=gene-IXO1104_RS18375;Name=IXO1104_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18375;old_locus_tag=IXO1104_18340 NZ_CP047492.1 Protein Homology CDS 3965645 3965905 . - 0 ID=cds-WP_012444328.1;Parent=gene-IXO1104_RS18375;Dbxref=Genbank:WP_012444328.1;Name=WP_012444328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471049.1;locus_tag=IXO1104_RS18375;product=PAAR domain-containing protein;protein_id=WP_012444328.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3966015 3966872 . - . ID=gene-IXO1104_RS18380;Name=IXO1104_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18380;old_locus_tag=IXO1104_18345 NZ_CP047492.1 Protein Homology CDS 3966015 3966872 . - 0 ID=cds-WP_075244683.1;Parent=gene-IXO1104_RS18380;Dbxref=Genbank:WP_075244683.1;Name=WP_075244683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471046.1;locus_tag=IXO1104_RS18380;product=M15 family metallopeptidase;protein_id=WP_075244683.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3967093 3967824 . + . ID=gene-IXO1104_RS18385;Name=IXO1104_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18385;old_locus_tag=IXO1104_18350 NZ_CP047492.1 Protein Homology CDS 3967093 3967824 . + 0 ID=cds-WP_075240226.1;Parent=gene-IXO1104_RS18385;Dbxref=Genbank:WP_075240226.1;Name=WP_075240226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409229.1;locus_tag=IXO1104_RS18385;product=hypothetical protein;protein_id=WP_075240226.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3967862 3968017 . + . ID=gene-IXO1104_RS18390;Name=IXO1104_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18390 NZ_CP047492.1 GeneMarkS-2+ CDS 3967862 3968017 . + 0 ID=cds-WP_153303321.1;Parent=gene-IXO1104_RS18390;Dbxref=Genbank:WP_153303321.1;Name=WP_153303321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS18390;product=hypothetical protein;protein_id=WP_153303321.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3968087 3968257 . + . ID=gene-IXO1104_RS18395;Name=IXO1104_RS18395;end_range=3968257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18395;old_locus_tag=IXO1104_18355;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 3968087 3968257 . + 0 ID=cds-IXO1104_RS18395;Parent=gene-IXO1104_RS18395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3968257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=IXO1104_RS18395;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3968243 3968641 . + . ID=gene-IXO1104_RS18400;Name=IXO1104_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18400 NZ_CP047492.1 Protein Homology CDS 3968243 3968641 . + 0 ID=cds-WP_143704877.1;Parent=gene-IXO1104_RS18400;Dbxref=Genbank:WP_143704877.1;Name=WP_143704877.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=IXO1104_RS18400;product=transposase;protein_id=WP_143704877.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3968841 3970043 . - . ID=gene-IXO1104_RS18405;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=IXO1104_RS18405;old_locus_tag=IXO1104_18360 NZ_CP047492.1 Protein Homology CDS 3968841 3970043 . - 0 ID=cds-WP_011409230.1;Parent=gene-IXO1104_RS18405;Dbxref=Genbank:WP_011409230.1;Name=WP_011409230.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472403.1;locus_tag=IXO1104_RS18405;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_011409230.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3970243 3970650 . + . ID=gene-IXO1104_RS18410;Name=IXO1104_RS18410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18410;old_locus_tag=IXO1104_18365;partial=true;pseudo=true;start_range=.,3970243 NZ_CP047492.1 Protein Homology CDS 3970243 3970650 . + 0 ID=cds-IXO1104_RS18410;Parent=gene-IXO1104_RS18410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507017.1;locus_tag=IXO1104_RS18410;partial=true;product=SPFH domain-containing protein;pseudo=true;start_range=.,3970243;transl_table=11 NZ_CP047492.1 RefSeq gene 3970660 3970944 . + . ID=gene-IXO1104_RS18415;Name=IXO1104_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18415;old_locus_tag=IXO1104_18370 NZ_CP047492.1 Protein Homology CDS 3970660 3970944 . + 0 ID=cds-WP_011259987.1;Parent=gene-IXO1104_RS18415;Dbxref=Genbank:WP_011259987.1;Name=WP_011259987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156562.1;locus_tag=IXO1104_RS18415;product=hypothetical protein;protein_id=WP_011259987.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3970941 3971120 . + . ID=gene-IXO1104_RS18420;Name=IXO1104_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18420;old_locus_tag=IXO1104_18375 NZ_CP047492.1 Protein Homology CDS 3970941 3971120 . + 0 ID=cds-WP_011259988.1;Parent=gene-IXO1104_RS18420;Dbxref=Genbank:WP_011259988.1;Name=WP_011259988.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302659.1;locus_tag=IXO1104_RS18420;product=Arc family DNA-binding protein;protein_id=WP_011259988.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3971251 3972048 . + . ID=gene-IXO1104_RS18425;Name=IXO1104_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18425;old_locus_tag=IXO1104_18380 NZ_CP047492.1 Protein Homology CDS 3971251 3972048 . + 0 ID=cds-WP_011259989.1;Parent=gene-IXO1104_RS18425;Dbxref=Genbank:WP_011259989.1;Name=WP_011259989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259989.1;locus_tag=IXO1104_RS18425;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_011259989.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3972112 3972786 . - . ID=gene-IXO1104_RS18430;Name=IXO1104_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18430;old_locus_tag=IXO1104_18385 NZ_CP047492.1 Protein Homology CDS 3972112 3972786 . - 0 ID=cds-WP_011259990.1;Parent=gene-IXO1104_RS18430;Dbxref=Genbank:WP_011259990.1;Name=WP_011259990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574704.1;locus_tag=IXO1104_RS18430;product=DNA-3-methyladenine glycosylase;protein_id=WP_011259990.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3972789 3973175 . - . ID=gene-IXO1104_RS18435;Name=IXO1104_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18435;old_locus_tag=IXO1104_18390 NZ_CP047492.1 Protein Homology CDS 3972789 3973175 . - 0 ID=cds-WP_027703302.1;Parent=gene-IXO1104_RS18435;Dbxref=Genbank:WP_027703302.1;Name=WP_027703302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259991.1;locus_tag=IXO1104_RS18435;product=DUF423 domain-containing protein;protein_id=WP_027703302.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3973257 3974438 . - . ID=gene-IXO1104_RS18440;Name=IXO1104_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18440;old_locus_tag=IXO1104_18395 NZ_CP047492.1 Protein Homology CDS 3973257 3974438 . - 0 ID=cds-WP_011259992.1;Parent=gene-IXO1104_RS18440;Dbxref=Genbank:WP_011259992.1;Name=WP_011259992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117313.1;locus_tag=IXO1104_RS18440;product=SRPBCC family protein;protein_id=WP_011259992.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3974789 3975430 . - . ID=gene-IXO1104_RS18445;Name=IXO1104_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18445;old_locus_tag=IXO1104_18400 NZ_CP047492.1 Protein Homology CDS 3974789 3975430 . - 0 ID=cds-WP_010371538.1;Parent=gene-IXO1104_RS18445;Dbxref=Genbank:WP_010371538.1;Name=WP_010371538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807809.1;locus_tag=IXO1104_RS18445;product=response regulator transcription factor;protein_id=WP_010371538.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3975430 3976626 . - . ID=gene-IXO1104_RS18450;Name=IXO1104_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18450;old_locus_tag=IXO1104_18405 NZ_CP047492.1 Protein Homology CDS 3975430 3976626 . - 0 ID=cds-WP_011259994.1;Parent=gene-IXO1104_RS18450;Dbxref=Genbank:WP_011259994.1;Name=WP_011259994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171659.1;locus_tag=IXO1104_RS18450;product=sensor histidine kinase;protein_id=WP_011259994.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3976681 3977479 . + . ID=gene-IXO1104_RS18455;Name=IXO1104_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18455;old_locus_tag=IXO1104_18410 NZ_CP047492.1 Protein Homology CDS 3976681 3976952 . + 0 ID=cds-WP_094187763.1-7;Parent=gene-IXO1104_RS18455;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS18455;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 3976951 3977479 . + 1 ID=cds-WP_094187763.1-7;Parent=gene-IXO1104_RS18455;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS18455;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3977723 3978319 . + . ID=gene-IXO1104_RS18460;Name=IXO1104_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18460;old_locus_tag=IXO1104_18415 NZ_CP047492.1 Protein Homology CDS 3977723 3978319 . + 0 ID=cds-WP_011259995.1;Parent=gene-IXO1104_RS18460;Dbxref=Genbank:WP_011259995.1;Name=WP_011259995.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156556.1;locus_tag=IXO1104_RS18460;product=GNAT family N-acetyltransferase;protein_id=WP_011259995.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3978324 3979064 . + . ID=gene-IXO1104_RS18465;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=IXO1104_RS18465;old_locus_tag=IXO1104_18420 NZ_CP047492.1 Protein Homology CDS 3978324 3979064 . + 0 ID=cds-WP_027703303.1;Parent=gene-IXO1104_RS18465;Dbxref=Genbank:WP_027703303.1;Name=WP_027703303.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=IXO1104_RS18465;product=septum site-determining protein MinC;protein_id=WP_027703303.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3979100 3979909 . + . ID=gene-IXO1104_RS18470;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=IXO1104_RS18470;old_locus_tag=IXO1104_18425 NZ_CP047492.1 Protein Homology CDS 3979100 3979909 . + 0 ID=cds-WP_012444318.1;Parent=gene-IXO1104_RS18470;Dbxref=Genbank:WP_012444318.1;Name=WP_012444318.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=IXO1104_RS18470;product=septum site-determining protein MinD;protein_id=WP_012444318.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3979912 3980169 . + . ID=gene-IXO1104_RS18475;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=IXO1104_RS18475;old_locus_tag=IXO1104_18430 NZ_CP047492.1 Protein Homology CDS 3979912 3980169 . + 0 ID=cds-WP_003484370.1;Parent=gene-IXO1104_RS18475;Dbxref=Genbank:WP_003484370.1;Name=WP_003484370.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036323.1;locus_tag=IXO1104_RS18475;product=cell division topological specificity factor MinE;protein_id=WP_003484370.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3980238 3980729 . + . ID=gene-IXO1104_RS18480;Name=IXO1104_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18480;old_locus_tag=IXO1104_18435 NZ_CP047492.1 Protein Homology CDS 3980238 3980729 . + 0 ID=cds-WP_027703304.1;Parent=gene-IXO1104_RS18480;Dbxref=Genbank:WP_027703304.1;Name=WP_027703304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484372.1;locus_tag=IXO1104_RS18480;product=hypothetical protein;protein_id=WP_027703304.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3980881 3982173 . - . ID=gene-IXO1104_RS18485;Name=IXO1104_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18485;old_locus_tag=IXO1104_18440 NZ_CP047492.1 Protein Homology CDS 3980881 3982173 . - 0 ID=cds-WP_027703305.1;Parent=gene-IXO1104_RS18485;Dbxref=Genbank:WP_027703305.1;Name=WP_027703305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303739.1;locus_tag=IXO1104_RS18485;product=HAMP domain-containing histidine kinase;protein_id=WP_027703305.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3982166 3982882 . - . ID=gene-IXO1104_RS18490;Name=IXO1104_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18490;old_locus_tag=IXO1104_18445 NZ_CP047492.1 Protein Homology CDS 3982166 3982882 . - 0 ID=cds-WP_011409239.1;Parent=gene-IXO1104_RS18490;Dbxref=Genbank:WP_011409239.1;Name=WP_011409239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484375.1;locus_tag=IXO1104_RS18490;product=response regulator transcription factor;protein_id=WP_011409239.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3983101 3984834 . + . ID=gene-IXO1104_RS18495;Name=IXO1104_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18495;old_locus_tag=IXO1104_18450 NZ_CP047492.1 Protein Homology CDS 3983101 3984834 . + 0 ID=cds-WP_027703306.1;Parent=gene-IXO1104_RS18495;Dbxref=Genbank:WP_027703306.1;Name=WP_027703306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930293.1;locus_tag=IXO1104_RS18495;product=glycosyltransferase family 39 protein;protein_id=WP_027703306.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3984934 3985698 . + . ID=gene-IXO1104_RS18500;Name=IXO1104_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18500;old_locus_tag=IXO1104_18455 NZ_CP047492.1 Protein Homology CDS 3984934 3985698 . + 0 ID=cds-WP_011409241.1;Parent=gene-IXO1104_RS18500;Dbxref=Genbank:WP_011409241.1;Name=WP_011409241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089620.1;locus_tag=IXO1104_RS18500;product=phosphatase PAP2 family protein;protein_id=WP_011409241.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3985695 3987365 . + . ID=gene-IXO1104_RS18505;Name=IXO1104_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18505;old_locus_tag=IXO1104_18460 NZ_CP047492.1 Protein Homology CDS 3985695 3987365 . + 0 ID=cds-WP_011409242.1;Parent=gene-IXO1104_RS18505;Dbxref=Genbank:WP_011409242.1;Name=WP_011409242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577029.1;locus_tag=IXO1104_RS18505;product=phosphoethanolamine transferase;protein_id=WP_011409242.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3987477 3989495 . + . ID=gene-IXO1104_RS18510;Name=IXO1104_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18510;old_locus_tag=IXO1104_18465 NZ_CP047492.1 Protein Homology CDS 3987477 3989495 . + 0 ID=cds-WP_075240502.1;Parent=gene-IXO1104_RS18510;Dbxref=Genbank:WP_075240502.1;Name=WP_075240502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484383.1;locus_tag=IXO1104_RS18510;product=M2 family metallopeptidase;protein_id=WP_075240502.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3989577 3989981 . - . ID=gene-IXO1104_RS18515;Name=IXO1104_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18515;old_locus_tag=IXO1104_18470 NZ_CP047492.1 Protein Homology CDS 3989577 3989981 . - 0 ID=cds-WP_011260005.1;Parent=gene-IXO1104_RS18515;Dbxref=Genbank:WP_011260005.1;Name=WP_011260005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154690.1;locus_tag=IXO1104_RS18515;product=hypothetical protein;protein_id=WP_011260005.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 3989998 3991028 . - . ID=gene-IXO1104_RS18520;Name=IXO1104_RS18520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18520;old_locus_tag=IXO1104_18475;pseudo=true NZ_CP047492.1 Protein Homology CDS 3989998 3991028 . - 0 ID=cds-IXO1104_RS18520;Parent=gene-IXO1104_RS18520;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930283.1;locus_tag=IXO1104_RS18520;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 3991323 3993482 . - . ID=gene-IXO1104_RS18525;Name=raxB;gbkey=Gene;gene=raxB;gene_biotype=protein_coding;locus_tag=IXO1104_RS18525;old_locus_tag=IXO1104_18480 NZ_CP047492.1 Protein Homology CDS 3991323 3993482 . - 0 ID=cds-WP_075240503.1;Parent=gene-IXO1104_RS18525;Dbxref=Genbank:WP_075240503.1;Name=WP_075240503.1;Note=Cleaves RaxX at a Gly-Gly motif on export.;gbkey=CDS;gene=raxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302887.1;locus_tag=IXO1104_RS18525;product=peptidase domain-containing ABC transporter RaxB;protein_id=WP_075240503.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3993479 3994798 . - . ID=gene-IXO1104_RS18530;Name=IXO1104_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18530;old_locus_tag=IXO1104_18485 NZ_CP047492.1 Protein Homology CDS 3993479 3994798 . - 0 ID=cds-WP_241846818.1;Parent=gene-IXO1104_RS18530;Dbxref=Genbank:WP_241846818.1;Name=WP_241846818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260007.1;locus_tag=IXO1104_RS18530;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_241846818.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3994779 3995582 . - . ID=gene-IXO1104_RS18535;Name=raxST;gbkey=Gene;gene=raxST;gene_biotype=protein_coding;locus_tag=IXO1104_RS18535;old_locus_tag=IXO1104_18490 NZ_CP047492.1 Protein Homology CDS 3994779 3995582 . - 0 ID=cds-WP_027703307.1;Parent=gene-IXO1104_RS18535;Dbxref=Genbank:WP_027703307.1;Name=WP_027703307.1;gbkey=CDS;gene=raxST;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160223.1;locus_tag=IXO1104_RS18535;product=RiPP modification sulfotransferase RaxST;protein_id=WP_027703307.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3996013 3996195 . + . ID=gene-IXO1104_RS18540;Name=raxX;gbkey=Gene;gene=raxX;gene_biotype=protein_coding;locus_tag=IXO1104_RS18540;old_locus_tag=IXO1104_18495 NZ_CP047492.1 Protein Homology CDS 3996013 3996195 . + 0 ID=cds-WP_041182602.1;Parent=gene-IXO1104_RS18540;Dbxref=Genbank:WP_041182602.1;Name=WP_041182602.1;gbkey=CDS;gene=raxX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154694.1;locus_tag=IXO1104_RS18540;product=RaxX family RiPP;protein_id=WP_041182602.1;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 3996449 3996563 . + . ID=id-NZ_CP047492.1:3996449..3996563;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 3996663 3999617 . + . ID=gene-IXO1104_RS18545;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=IXO1104_RS18545;old_locus_tag=IXO1104_18500 NZ_CP047492.1 Protein Homology CDS 3996663 3999617 . + 0 ID=cds-WP_069965063.1;Parent=gene-IXO1104_RS18545;Dbxref=Genbank:WP_069965063.1;Name=WP_069965063.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050782.1;locus_tag=IXO1104_RS18545;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_069965063.1;transl_table=11 NZ_CP047492.1 RefSeq gene 3999947 4000396 . + . ID=gene-IXO1104_RS18550;Name=IXO1104_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18550;old_locus_tag=IXO1104_18505 NZ_CP047492.1 Protein Homology CDS 3999947 4000396 . + 0 ID=cds-WP_011260010.1;Parent=gene-IXO1104_RS18550;Dbxref=Genbank:WP_011260010.1;Name=WP_011260010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409249.1;locus_tag=IXO1104_RS18550;product=hypothetical protein;protein_id=WP_011260010.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4000393 4001088 . + . ID=gene-IXO1104_RS18555;Name=IXO1104_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18555;old_locus_tag=IXO1104_18510 NZ_CP047492.1 Protein Homology CDS 4000393 4001088 . + 0 ID=cds-WP_011260011.1;Parent=gene-IXO1104_RS18555;Dbxref=Genbank:WP_011260011.1;Name=WP_011260011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409250.1;locus_tag=IXO1104_RS18555;product=VRR-NUC domain-containing protein;protein_id=WP_011260011.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4001096 4002166 . + . ID=gene-IXO1104_RS18560;Name=IXO1104_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18560;old_locus_tag=IXO1104_18515 NZ_CP047492.1 Protein Homology CDS 4001096 4002166 . + 0 ID=cds-WP_044756504.1;Parent=gene-IXO1104_RS18560;Dbxref=Genbank:WP_044756504.1;Name=WP_044756504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=IXO1104_RS18560;product=DUF3396 domain-containing protein;protein_id=WP_044756504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4002163 4003248 . + . ID=gene-IXO1104_RS18565;Name=IXO1104_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18565;old_locus_tag=IXO1104_18520 NZ_CP047492.1 Protein Homology CDS 4002163 4003248 . + 0 ID=cds-WP_011409252.1;Parent=gene-IXO1104_RS18565;Dbxref=Genbank:WP_011409252.1;Name=WP_011409252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305349.1;locus_tag=IXO1104_RS18565;product=DUF3396 domain-containing protein;protein_id=WP_011409252.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4003394 4003477 . + . ID=gene-IXO1104_RS18570;Name=IXO1104_RS18570;end_range=4003477,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18570;old_locus_tag=IXO1104_18525;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4003394 4003477 . + 0 ID=cds-IXO1104_RS18570;Parent=gene-IXO1104_RS18570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4003477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS18570;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4003509 4004550 . - . ID=gene-IXO1104_RS18575;Name=IXO1104_RS18575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18575;old_locus_tag=IXO1104_18530;pseudo=true NZ_CP047492.1 Protein Homology CDS 4003509 4004550 . - 0 ID=cds-IXO1104_RS18575;Parent=gene-IXO1104_RS18575;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS18575;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4004649 4005605 . - . ID=gene-IXO1104_RS18580;Name=IXO1104_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18580;old_locus_tag=IXO1104_18535 NZ_CP047492.1 Protein Homology CDS 4004649 4005605 . - 0 ID=cds-WP_082322974.1;Parent=gene-IXO1104_RS18580;Dbxref=Genbank:WP_082322974.1;Name=WP_082322974.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS18580;product=IS30-like element IS1112 family transposase;protein_id=WP_082322974.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4005700 4006241 . + . ID=gene-IXO1104_RS18585;Name=IXO1104_RS18585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18585;old_locus_tag=IXO1104_18540;partial=true;pseudo=true;start_range=.,4005700 NZ_CP047492.1 Protein Homology CDS 4005700 4006241 . + 0 ID=cds-IXO1104_RS18585;Parent=gene-IXO1104_RS18585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS18585;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,4005700;transl_table=11 NZ_CP047492.1 RefSeq gene 4006423 4007481 . + . ID=gene-IXO1104_RS18590;Name=IXO1104_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18590;old_locus_tag=IXO1104_18545 NZ_CP047492.1 Protein Homology CDS 4006423 4007481 . + 0 ID=cds-WP_164994180.1;Parent=gene-IXO1104_RS18590;Dbxref=Genbank:WP_164994180.1;Name=WP_164994180.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409255.1;locus_tag=IXO1104_RS18590;product=IS630 family transposase;protein_id=WP_164994180.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4007615 4007998 . - . ID=gene-IXO1104_RS18595;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS18595;old_locus_tag=IXO1104_18550 NZ_CP047492.1 Protein Homology CDS 4007615 4007998 . - 0 ID=cds-WP_003486665.1;Parent=gene-IXO1104_RS18595;Dbxref=Genbank:WP_003486665.1;Name=WP_003486665.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1;locus_tag=IXO1104_RS18595;product=50S ribosomal protein L17;protein_id=WP_003486665.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4008180 4009178 . - . ID=gene-IXO1104_RS18600;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18600;old_locus_tag=IXO1104_18555 NZ_CP047492.1 Protein Homology CDS 4008180 4009178 . - 0 ID=cds-WP_002811635.1;Parent=gene-IXO1104_RS18600;Dbxref=Genbank:WP_002811635.1;Name=WP_002811635.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=IXO1104_RS18600;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002811635.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4009232 4009858 . - . ID=gene-IXO1104_RS18605;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=IXO1104_RS18605;old_locus_tag=IXO1104_18560 NZ_CP047492.1 Protein Homology CDS 4009232 4009858 . - 0 ID=cds-WP_011260018.1;Parent=gene-IXO1104_RS18605;Dbxref=Genbank:WP_011260018.1;Name=WP_011260018.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145446.1;locus_tag=IXO1104_RS18605;product=30S ribosomal protein S4;protein_id=WP_011260018.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4009874 4010266 . - . ID=gene-IXO1104_RS18610;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=IXO1104_RS18610;old_locus_tag=IXO1104_18565 NZ_CP047492.1 Protein Homology CDS 4009874 4010266 . - 0 ID=cds-WP_011260019.1;Parent=gene-IXO1104_RS18610;Dbxref=Genbank:WP_011260019.1;Name=WP_011260019.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996786.1;locus_tag=IXO1104_RS18610;product=30S ribosomal protein S11;protein_id=WP_011260019.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4010277 4010633 . - . ID=gene-IXO1104_RS18615;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=IXO1104_RS18615;old_locus_tag=IXO1104_18570 NZ_CP047492.1 Protein Homology CDS 4010277 4010633 . - 0 ID=cds-WP_003486672.1;Parent=gene-IXO1104_RS18615;Dbxref=Genbank:WP_003486672.1;Name=WP_003486672.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154500.1;locus_tag=IXO1104_RS18615;product=30S ribosomal protein S13;protein_id=WP_003486672.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4010966 4012330 . - . ID=gene-IXO1104_RS18620;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=IXO1104_RS18620;old_locus_tag=IXO1104_18575 NZ_CP047492.1 Protein Homology CDS 4010966 4012330 . - 0 ID=cds-WP_011260020.1;Parent=gene-IXO1104_RS18620;Dbxref=Genbank:WP_011260020.1;Name=WP_011260020.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486674.1;locus_tag=IXO1104_RS18620;product=preprotein translocase subunit SecY;protein_id=WP_011260020.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4012338 4012781 . - . ID=gene-IXO1104_RS18625;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=IXO1104_RS18625;old_locus_tag=IXO1104_18580 NZ_CP047492.1 Protein Homology CDS 4012338 4012781 . - 0 ID=cds-WP_011260021.1;Parent=gene-IXO1104_RS18625;Dbxref=Genbank:WP_011260021.1;Name=WP_011260021.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=IXO1104_RS18625;product=50S ribosomal protein L15;protein_id=WP_011260021.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4012786 4012977 . - . ID=gene-IXO1104_RS18630;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=IXO1104_RS18630;old_locus_tag=IXO1104_18585 NZ_CP047492.1 Protein Homology CDS 4012786 4012977 . - 0 ID=cds-WP_003486678.1;Parent=gene-IXO1104_RS18630;Dbxref=Genbank:WP_003486678.1;Name=WP_003486678.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486678.1;locus_tag=IXO1104_RS18630;product=50S ribosomal protein L30;protein_id=WP_003486678.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4012970 4013512 . - . ID=gene-IXO1104_RS18635;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=IXO1104_RS18635;old_locus_tag=IXO1104_18590 NZ_CP047492.1 Protein Homology CDS 4012970 4013512 . - 0 ID=cds-WP_003486682.1;Parent=gene-IXO1104_RS18635;Dbxref=Genbank:WP_003486682.1;Name=WP_003486682.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145411.1;locus_tag=IXO1104_RS18635;product=30S ribosomal protein S5;protein_id=WP_003486682.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4013671 4014030 . - . ID=gene-IXO1104_RS18640;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=IXO1104_RS18640;old_locus_tag=IXO1104_18595 NZ_CP047492.1 Protein Homology CDS 4013671 4014030 . - 0 ID=cds-WP_010371104.1;Parent=gene-IXO1104_RS18640;Dbxref=Genbank:WP_010371104.1;Name=WP_010371104.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811659.1;locus_tag=IXO1104_RS18640;product=50S ribosomal protein L18;protein_id=WP_010371104.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4014119 4014646 . - . ID=gene-IXO1104_RS18645;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=IXO1104_RS18645;old_locus_tag=IXO1104_18600 NZ_CP047492.1 Protein Homology CDS 4014119 4014646 . - 0 ID=cds-WP_011260022.1;Parent=gene-IXO1104_RS18645;Dbxref=Genbank:WP_011260022.1;Name=WP_011260022.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=IXO1104_RS18645;product=50S ribosomal protein L6;protein_id=WP_011260022.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4014662 4015060 . - . ID=gene-IXO1104_RS18650;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=IXO1104_RS18650;old_locus_tag=IXO1104_18605 NZ_CP047492.1 Protein Homology CDS 4014662 4015060 . - 0 ID=cds-WP_011260023.1;Parent=gene-IXO1104_RS18650;Dbxref=Genbank:WP_011260023.1;Name=WP_011260023.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=IXO1104_RS18650;product=30S ribosomal protein S8;protein_id=WP_011260023.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4015266 4015571 . - . ID=gene-IXO1104_RS18655;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=IXO1104_RS18655;old_locus_tag=IXO1104_18610 NZ_CP047492.1 Protein Homology CDS 4015266 4015571 . - 0 ID=cds-WP_005917137.1;Parent=gene-IXO1104_RS18655;Dbxref=Genbank:WP_005917137.1;Name=WP_005917137.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917137.1;locus_tag=IXO1104_RS18655;product=30S ribosomal protein S14;protein_id=WP_005917137.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4015590 4016132 . - . ID=gene-IXO1104_RS18660;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=IXO1104_RS18660;old_locus_tag=IXO1104_18615 NZ_CP047492.1 Protein Homology CDS 4015590 4016132 . - 0 ID=cds-WP_011260024.1;Parent=gene-IXO1104_RS18660;Dbxref=Genbank:WP_011260024.1;Name=WP_011260024.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486694.1;locus_tag=IXO1104_RS18660;product=50S ribosomal protein L5;protein_id=WP_011260024.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4016144 4016461 . - . ID=gene-IXO1104_RS18665;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=IXO1104_RS18665;old_locus_tag=IXO1104_18620 NZ_CP047492.1 Protein Homology CDS 4016144 4016461 . - 0 ID=cds-WP_011260025.1;Parent=gene-IXO1104_RS18665;Dbxref=Genbank:WP_011260025.1;Name=WP_011260025.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=IXO1104_RS18665;product=50S ribosomal protein L24;protein_id=WP_011260025.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4016477 4016845 . - . ID=gene-IXO1104_RS18670;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=IXO1104_RS18670;old_locus_tag=IXO1104_18625 NZ_CP047492.1 Protein Homology CDS 4016477 4016845 . - 0 ID=cds-WP_011260026.1;Parent=gene-IXO1104_RS18670;Dbxref=Genbank:WP_011260026.1;Name=WP_011260026.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=IXO1104_RS18670;product=50S ribosomal protein L14;protein_id=WP_011260026.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4016860 4017129 . - . ID=gene-IXO1104_RS18675;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS18675;old_locus_tag=IXO1104_18630 NZ_CP047492.1 Protein Homology CDS 4016860 4017129 . - 0 ID=cds-WP_003486701.1;Parent=gene-IXO1104_RS18675;Dbxref=Genbank:WP_003486701.1;Name=WP_003486701.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154489.1;locus_tag=IXO1104_RS18675;product=30S ribosomal protein S17;protein_id=WP_003486701.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4017141 4017326 . - . ID=gene-IXO1104_RS18680;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=IXO1104_RS18680;old_locus_tag=IXO1104_18635 NZ_CP047492.1 Protein Homology CDS 4017141 4017326 . - 0 ID=cds-WP_003486703.1;Parent=gene-IXO1104_RS18680;Dbxref=Genbank:WP_003486703.1;Name=WP_003486703.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050639.1;locus_tag=IXO1104_RS18680;product=50S ribosomal protein L29;protein_id=WP_003486703.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4017326 4017739 . - . ID=gene-IXO1104_RS18685;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=IXO1104_RS18685;old_locus_tag=IXO1104_18640 NZ_CP047492.1 Protein Homology CDS 4017326 4017739 . - 0 ID=cds-WP_003486706.1;Parent=gene-IXO1104_RS18685;Dbxref=Genbank:WP_003486706.1;Name=WP_003486706.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=IXO1104_RS18685;product=50S ribosomal protein L16;protein_id=WP_003486706.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4017745 4018479 . - . ID=gene-IXO1104_RS18690;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=IXO1104_RS18690;old_locus_tag=IXO1104_18645 NZ_CP047492.1 Protein Homology CDS 4017745 4018479 . - 0 ID=cds-WP_005993372.1;Parent=gene-IXO1104_RS18690;Dbxref=Genbank:WP_005993372.1;Name=WP_005993372.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811684.1;locus_tag=IXO1104_RS18690;product=30S ribosomal protein S3;protein_id=WP_005993372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4018497 4018832 . - . ID=gene-IXO1104_RS18695;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=IXO1104_RS18695;old_locus_tag=IXO1104_18650 NZ_CP047492.1 Protein Homology CDS 4018497 4018832 . - 0 ID=cds-WP_002811686.1;Parent=gene-IXO1104_RS18695;Dbxref=Genbank:WP_002811686.1;Name=WP_002811686.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=IXO1104_RS18695;product=50S ribosomal protein L22;protein_id=WP_002811686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4018845 4019114 . - . ID=gene-IXO1104_RS18700;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=IXO1104_RS18700;old_locus_tag=IXO1104_18655 NZ_CP047492.1 Protein Homology CDS 4018845 4019114 . - 0 ID=cds-WP_005993369.1;Parent=gene-IXO1104_RS18700;Dbxref=Genbank:WP_005993369.1;Name=WP_005993369.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341594.1;locus_tag=IXO1104_RS18700;product=30S ribosomal protein S19;protein_id=WP_005993369.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4019121 4019948 . - . ID=gene-IXO1104_RS18705;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=IXO1104_RS18705;old_locus_tag=IXO1104_18660 NZ_CP047492.1 Protein Homology CDS 4019121 4019948 . - 0 ID=cds-WP_011260027.1;Parent=gene-IXO1104_RS18705;Dbxref=Genbank:WP_011260027.1;Name=WP_011260027.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=IXO1104_RS18705;product=50S ribosomal protein L2;protein_id=WP_011260027.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4019959 4020258 . - . ID=gene-IXO1104_RS18710;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=IXO1104_RS18710;old_locus_tag=IXO1104_18665 NZ_CP047492.1 Protein Homology CDS 4019959 4020258 . - 0 ID=cds-WP_003486717.1;Parent=gene-IXO1104_RS18710;Dbxref=Genbank:WP_003486717.1;Name=WP_003486717.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145338.1;locus_tag=IXO1104_RS18710;product=50S ribosomal protein L23;protein_id=WP_003486717.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4020255 4020860 . - . ID=gene-IXO1104_RS18715;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=IXO1104_RS18715;old_locus_tag=IXO1104_18670 NZ_CP047492.1 Protein Homology CDS 4020255 4020860 . - 0 ID=cds-WP_011260028.1;Parent=gene-IXO1104_RS18715;Dbxref=Genbank:WP_011260028.1;Name=WP_011260028.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=IXO1104_RS18715;product=50S ribosomal protein L4;protein_id=WP_011260028.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4020873 4021523 . - . ID=gene-IXO1104_RS18720;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=IXO1104_RS18720;old_locus_tag=IXO1104_18675 NZ_CP047492.1 Protein Homology CDS 4020873 4021523 . - 0 ID=cds-WP_011260029.1;Parent=gene-IXO1104_RS18720;Dbxref=Genbank:WP_011260029.1;Name=WP_011260029.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036123.1;locus_tag=IXO1104_RS18720;product=50S ribosomal protein L3;protein_id=WP_011260029.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4021535 4021849 . - . ID=gene-IXO1104_RS18725;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS18725;old_locus_tag=IXO1104_18680 NZ_CP047492.1 Protein Homology CDS 4021535 4021849 . - 0 ID=cds-WP_011409257.1;Parent=gene-IXO1104_RS18725;Dbxref=Genbank:WP_011409257.1;Name=WP_011409257.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=IXO1104_RS18725;product=30S ribosomal protein S10;protein_id=WP_011409257.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4022639 4023310 . + . ID=gene-IXO1104_RS18730;Name=IXO1104_RS18730;end_range=4023310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18730;old_locus_tag=IXO1104_18685;partial=true;pseudo=true;start_range=.,4022639 NZ_CP047492.1 Protein Homology CDS 4022639 4023310 . + 0 ID=cds-IXO1104_RS18730;Parent=gene-IXO1104_RS18730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=4023310,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1104_RS18730;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4022639;transl_table=11 NZ_CP047492.1 RefSeq gene 4023626 4024816 . - . ID=gene-IXO1104_RS18735;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IXO1104_RS18735;old_locus_tag=IXO1104_18690 NZ_CP047492.1 Protein Homology CDS 4023626 4024816 . - 0 ID=cds-WP_011260030.1;Parent=gene-IXO1104_RS18735;Dbxref=Genbank:WP_011260030.1;Name=WP_011260030.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=IXO1104_RS18735;product=elongation factor Tu;protein_id=WP_011260030.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4024866 4026983 . - . ID=gene-IXO1104_RS18740;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18740;old_locus_tag=IXO1104_18695 NZ_CP047492.1 Protein Homology CDS 4024866 4026983 . - 0 ID=cds-WP_011260031.1;Parent=gene-IXO1104_RS18740;Dbxref=Genbank:WP_011260031.1;Name=WP_011260031.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156211.1;locus_tag=IXO1104_RS18740;product=elongation factor G;protein_id=WP_011260031.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4027122 4027589 . - . ID=gene-IXO1104_RS18745;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=IXO1104_RS18745;old_locus_tag=IXO1104_18700 NZ_CP047492.1 Protein Homology CDS 4027122 4027589 . - 0 ID=cds-WP_011260032.1;Parent=gene-IXO1104_RS18745;Dbxref=Genbank:WP_011260032.1;Name=WP_011260032.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=IXO1104_RS18745;product=30S ribosomal protein S7;protein_id=WP_011260032.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4027602 4027976 . - . ID=gene-IXO1104_RS18750;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=IXO1104_RS18750;old_locus_tag=IXO1104_18705 NZ_CP047492.1 Protein Homology CDS 4027602 4027976 . - 0 ID=cds-WP_002811712.1;Parent=gene-IXO1104_RS18750;Dbxref=Genbank:WP_002811712.1;Name=WP_002811712.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=IXO1104_RS18750;product=30S ribosomal protein S12;protein_id=WP_002811712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4028195 4032412 . - . ID=gene-IXO1104_RS18755;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=IXO1104_RS18755;old_locus_tag=IXO1104_18710 NZ_CP047492.1 Protein Homology CDS 4028195 4032412 . - 0 ID=cds-WP_075239310.1;Parent=gene-IXO1104_RS18755;Dbxref=Genbank:WP_075239310.1;Name=WP_075239310.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036119.1;locus_tag=IXO1104_RS18755;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_075239310.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4032563 4036714 . - . ID=gene-IXO1104_RS18760;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=IXO1104_RS18760;old_locus_tag=IXO1104_18715 NZ_CP047492.1 Protein Homology CDS 4032563 4036714 . - 0 ID=cds-WP_011260034.1;Parent=gene-IXO1104_RS18760;Dbxref=Genbank:WP_011260034.1;Name=WP_011260034.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930752.1;locus_tag=IXO1104_RS18760;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_011260034.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4037011 4037379 . - . ID=gene-IXO1104_RS18765;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=IXO1104_RS18765;old_locus_tag=IXO1104_18720 NZ_CP047492.1 Protein Homology CDS 4037011 4037379 . - 0 ID=cds-WP_011260035.1;Parent=gene-IXO1104_RS18765;Dbxref=Genbank:WP_011260035.1;Name=WP_011260035.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574194.1;locus_tag=IXO1104_RS18765;product=50S ribosomal protein L7/L12;protein_id=WP_011260035.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4037434 4037967 . - . ID=gene-IXO1104_RS18770;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=IXO1104_RS18770;old_locus_tag=IXO1104_18725 NZ_CP047492.1 Protein Homology CDS 4037434 4037967 . - 0 ID=cds-WP_011260036.1;Parent=gene-IXO1104_RS18770;Dbxref=Genbank:WP_011260036.1;Name=WP_011260036.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036116.1;locus_tag=IXO1104_RS18770;product=50S ribosomal protein L10;protein_id=WP_011260036.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4038513 4039211 . - . ID=gene-IXO1104_RS18775;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18775;old_locus_tag=IXO1104_18730 NZ_CP047492.1 Protein Homology CDS 4038513 4039211 . - 0 ID=cds-WP_011409258.1;Parent=gene-IXO1104_RS18775;Dbxref=Genbank:WP_011409258.1;Name=WP_011409258.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341341.1;locus_tag=IXO1104_RS18775;product=50S ribosomal protein L1;protein_id=WP_011409258.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4039215 4039643 . - . ID=gene-IXO1104_RS18780;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=IXO1104_RS18780;old_locus_tag=IXO1104_18735 NZ_CP047492.1 Protein Homology CDS 4039215 4039643 . - 0 ID=cds-WP_011260038.1;Parent=gene-IXO1104_RS18780;Dbxref=Genbank:WP_011260038.1;Name=WP_011260038.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=IXO1104_RS18780;product=50S ribosomal protein L11;protein_id=WP_011260038.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4039840 4040397 . - . ID=gene-IXO1104_RS18785;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=IXO1104_RS18785;old_locus_tag=IXO1104_18740 NZ_CP047492.1 Protein Homology CDS 4039840 4040397 . - 0 ID=cds-WP_011409259.1;Parent=gene-IXO1104_RS18785;Dbxref=Genbank:WP_011409259.1;Name=WP_011409259.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162956.1;locus_tag=IXO1104_RS18785;product=transcription termination/antitermination protein NusG;protein_id=WP_011409259.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4040411 4040821 . - . ID=gene-IXO1104_RS18790;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=IXO1104_RS18790;old_locus_tag=IXO1104_18745 NZ_CP047492.1 Protein Homology CDS 4040411 4040821 . - 0 ID=cds-WP_011260040.1;Parent=gene-IXO1104_RS18790;Dbxref=Genbank:WP_011260040.1;Name=WP_011260040.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993330.1;locus_tag=IXO1104_RS18790;product=preprotein translocase subunit SecE;protein_id=WP_011260040.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4040871 4040946 . - . ID=gene-IXO1104_RS18795;Name=IXO1104_RS18795;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS18795;old_locus_tag=IXO1104_18750 NZ_CP047492.1 tRNAscan-SE tRNA 4040871 4040946 . - . ID=rna-IXO1104_RS18795;Parent=gene-IXO1104_RS18795;anticodon=(pos:complement(4040911..4040913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18795;product=tRNA-Trp NZ_CP047492.1 tRNAscan-SE exon 4040871 4040946 . - . ID=exon-IXO1104_RS18795-1;Parent=rna-IXO1104_RS18795;anticodon=(pos:complement(4040911..4040913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18795;product=tRNA-Trp NZ_CP047492.1 RefSeq gene 4041052 4042242 . - . ID=gene-IXO1104_RS18800;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IXO1104_RS18800;old_locus_tag=IXO1104_18755 NZ_CP047492.1 Protein Homology CDS 4041052 4042242 . - 0 ID=cds-WP_011260030.1-2;Parent=gene-IXO1104_RS18800;Dbxref=Genbank:WP_011260030.1;Name=WP_011260030.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=IXO1104_RS18800;product=elongation factor Tu;protein_id=WP_011260030.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4042289 4042364 . - . ID=gene-IXO1104_RS18805;Name=IXO1104_RS18805;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS18805;old_locus_tag=IXO1104_18760 NZ_CP047492.1 tRNAscan-SE tRNA 4042289 4042364 . - . ID=rna-IXO1104_RS18805;Parent=gene-IXO1104_RS18805;anticodon=(pos:complement(4042329..4042331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18805;product=tRNA-Thr NZ_CP047492.1 tRNAscan-SE exon 4042289 4042364 . - . ID=exon-IXO1104_RS18805-1;Parent=rna-IXO1104_RS18805;anticodon=(pos:complement(4042329..4042331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18805;product=tRNA-Thr NZ_CP047492.1 RefSeq gene 4042399 4042472 . - . ID=gene-IXO1104_RS18810;Name=IXO1104_RS18810;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS18810;old_locus_tag=IXO1104_18765 NZ_CP047492.1 tRNAscan-SE tRNA 4042399 4042472 . - . ID=rna-IXO1104_RS18810;Parent=gene-IXO1104_RS18810;anticodon=(pos:complement(4042438..4042440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18810;product=tRNA-Gly NZ_CP047492.1 tRNAscan-SE exon 4042399 4042472 . - . ID=exon-IXO1104_RS18810-1;Parent=rna-IXO1104_RS18810;anticodon=(pos:complement(4042438..4042440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18810;product=tRNA-Gly NZ_CP047492.1 RefSeq gene 4042502 4042587 . - . ID=gene-IXO1104_RS18815;Name=IXO1104_RS18815;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS18815;old_locus_tag=IXO1104_18770 NZ_CP047492.1 tRNAscan-SE tRNA 4042502 4042587 . - . ID=rna-IXO1104_RS18815;Parent=gene-IXO1104_RS18815;anticodon=(pos:complement(4042551..4042553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18815;product=tRNA-Tyr NZ_CP047492.1 tRNAscan-SE exon 4042502 4042587 . - . ID=exon-IXO1104_RS18815-1;Parent=rna-IXO1104_RS18815;anticodon=(pos:complement(4042551..4042553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18815;product=tRNA-Tyr NZ_CP047492.1 RefSeq gene 4042741 4043832 . - . ID=gene-IXO1104_RS18820;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=IXO1104_RS18820;old_locus_tag=IXO1104_18775 NZ_CP047492.1 Protein Homology CDS 4042741 4043832 . - 0 ID=cds-WP_011260041.1;Parent=gene-IXO1104_RS18820;Dbxref=Genbank:WP_011260041.1;Name=WP_011260041.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506572.1;locus_tag=IXO1104_RS18820;product=redox-regulated ATPase YchF;protein_id=WP_011260041.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4043907 4044491 . - . ID=gene-IXO1104_RS18825;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=IXO1104_RS18825;old_locus_tag=IXO1104_18780 NZ_CP047492.1 Protein Homology CDS 4043907 4044491 . - 0 ID=cds-WP_011260042.1;Parent=gene-IXO1104_RS18825;Dbxref=Genbank:WP_011260042.1;Name=WP_011260042.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968854.1;locus_tag=IXO1104_RS18825;product=aminoacyl-tRNA hydrolase;protein_id=WP_011260042.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4044543 4045178 . - . ID=gene-IXO1104_RS18830;Name=IXO1104_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18830;old_locus_tag=IXO1104_18785 NZ_CP047492.1 Protein Homology CDS 4044543 4045178 . - 0 ID=cds-WP_011260043.1;Parent=gene-IXO1104_RS18830;Dbxref=Genbank:WP_011260043.1;Name=WP_011260043.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486759.1;locus_tag=IXO1104_RS18830;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_011260043.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4045288 4046247 . - . ID=gene-IXO1104_RS18835;Name=IXO1104_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18835;old_locus_tag=IXO1104_18790 NZ_CP047492.1 Protein Homology CDS 4045288 4046247 . - 0 ID=cds-WP_011409260.1;Parent=gene-IXO1104_RS18835;Dbxref=Genbank:WP_011409260.1;Name=WP_011409260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003428.0;locus_tag=IXO1104_RS18835;product=ribose-phosphate diphosphokinase;protein_id=WP_011409260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4046375 4046451 . - . ID=gene-IXO1104_RS18840;Name=IXO1104_RS18840;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS18840;old_locus_tag=IXO1104_18795 NZ_CP047492.1 tRNAscan-SE tRNA 4046375 4046451 . - . ID=rna-IXO1104_RS18840;Parent=gene-IXO1104_RS18840;anticodon=(pos:complement(4046415..4046417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18840;product=tRNA-Gln NZ_CP047492.1 tRNAscan-SE exon 4046375 4046451 . - . ID=exon-IXO1104_RS18840-1;Parent=rna-IXO1104_RS18840;anticodon=(pos:complement(4046415..4046417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS18840;product=tRNA-Gln NZ_CP047492.1 RefSeq gene 4046455 4047342 . - . ID=gene-IXO1104_RS18845;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=IXO1104_RS18845;old_locus_tag=IXO1104_18800 NZ_CP047492.1 Protein Homology CDS 4046455 4047342 . - 0 ID=cds-WP_011260045.1;Parent=gene-IXO1104_RS18845;Dbxref=Genbank:WP_011260045.1;Name=WP_011260045.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346534.1;locus_tag=IXO1104_RS18845;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_011260045.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4047324 4047977 . - . ID=gene-IXO1104_RS18850;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=IXO1104_RS18850;old_locus_tag=IXO1104_18805 NZ_CP047492.1 Protein Homology CDS 4047324 4047977 . - 0 ID=cds-WP_011260046.1;Parent=gene-IXO1104_RS18850;Dbxref=Genbank:WP_011260046.1;Name=WP_011260046.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172004.1;locus_tag=IXO1104_RS18850;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_011260046.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4047974 4049662 . - . ID=gene-IXO1104_RS18855;Name=IXO1104_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18855;old_locus_tag=IXO1104_18810 NZ_CP047492.1 Protein Homology CDS 4047974 4049662 . - 0 ID=cds-WP_011409262.1;Parent=gene-IXO1104_RS18855;Dbxref=Genbank:WP_011409262.1;Name=WP_011409262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972526.1;locus_tag=IXO1104_RS18855;product=tetratricopeptide repeat protein;protein_id=WP_011409262.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4049728 4051026 . + . ID=gene-IXO1104_RS18860;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18860;old_locus_tag=IXO1104_18815 NZ_CP047492.1 Protein Homology CDS 4049728 4051026 . + 0 ID=cds-WP_011260048.1;Parent=gene-IXO1104_RS18860;Dbxref=Genbank:WP_011260048.1;Name=WP_011260048.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450610.1;locus_tag=IXO1104_RS18860;product=glutamyl-tRNA reductase;protein_id=WP_011260048.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4051004 4052089 . + . ID=gene-IXO1104_RS18865;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18865;old_locus_tag=IXO1104_18820 NZ_CP047492.1 Protein Homology CDS 4051004 4052089 . + 0 ID=cds-WP_011260049.1;Parent=gene-IXO1104_RS18865;Dbxref=Genbank:WP_011260049.1;Name=WP_011260049.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=IXO1104_RS18865;product=peptide chain release factor 1;protein_id=WP_011260049.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4052086 4053792 . + . ID=gene-IXO1104_RS18870;Name=IXO1104_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18870;old_locus_tag=IXO1104_18825 NZ_CP047492.1 Protein Homology CDS 4052086 4053792 . + 0 ID=cds-WP_012444287.1;Parent=gene-IXO1104_RS18870;Dbxref=Genbank:WP_012444287.1;Name=WP_012444287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118468.1;locus_tag=IXO1104_RS18870;product=tetratricopeptide repeat protein;protein_id=WP_012444287.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4054258 4054776 . + . ID=gene-IXO1104_RS18875;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=IXO1104_RS18875;old_locus_tag=IXO1104_18830 NZ_CP047492.1 Protein Homology CDS 4054258 4054776 . + 0 ID=cds-WP_011260051.1;Parent=gene-IXO1104_RS18875;Dbxref=Genbank:WP_011260051.1;Name=WP_011260051.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346528.1;locus_tag=IXO1104_RS18875;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_011260051.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4054809 4055591 . + . ID=gene-IXO1104_RS18880;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=IXO1104_RS18880;old_locus_tag=IXO1104_18835 NZ_CP047492.1 Protein Homology CDS 4054809 4055591 . + 0 ID=cds-WP_011260052.1;Parent=gene-IXO1104_RS18880;Dbxref=Genbank:WP_011260052.1;Name=WP_011260052.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965859.1;locus_tag=IXO1104_RS18880;product=polyphosphate kinase 2;protein_id=WP_011260052.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4055573 4056802 . - . ID=gene-IXO1104_RS18885;Name=IXO1104_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18885;old_locus_tag=IXO1104_18840 NZ_CP047492.1 Protein Homology CDS 4055573 4056802 . - 0 ID=cds-WP_011260053.1;Parent=gene-IXO1104_RS18885;Dbxref=Genbank:WP_011260053.1;Name=WP_011260053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925993.1;locus_tag=IXO1104_RS18885;product=hypothetical protein;protein_id=WP_011260053.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4056888 4057154 . - . ID=gene-IXO1104_RS18890;Name=IXO1104_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18890;old_locus_tag=IXO1104_18845 NZ_CP047492.1 Protein Homology CDS 4056888 4057154 . - 0 ID=cds-WP_011409264.1;Parent=gene-IXO1104_RS18890;Dbxref=Genbank:WP_011409264.1;Name=WP_011409264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112879.1;locus_tag=IXO1104_RS18890;product=acylphosphatase;protein_id=WP_011409264.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4057154 4057756 . - . ID=gene-IXO1104_RS18895;Name=IXO1104_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18895;old_locus_tag=IXO1104_18850 NZ_CP047492.1 Protein Homology CDS 4057154 4057756 . - 0 ID=cds-WP_012444285.1;Parent=gene-IXO1104_RS18895;Dbxref=Genbank:WP_012444285.1;Name=WP_012444285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346527.1;locus_tag=IXO1104_RS18895;product=TlpA family protein disulfide reductase;protein_id=WP_012444285.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4057753 4059030 . - . ID=gene-IXO1104_RS18900;Name=IXO1104_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18900;old_locus_tag=IXO1104_18855 NZ_CP047492.1 Protein Homology CDS 4057753 4059030 . - 0 ID=cds-WP_011260056.1;Parent=gene-IXO1104_RS18900;Dbxref=Genbank:WP_011260056.1;Name=WP_011260056.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036096.1;locus_tag=IXO1104_RS18900;product=YihY family inner membrane protein;protein_id=WP_011260056.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4059142 4059738 . + . ID=gene-IXO1104_RS18905;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=IXO1104_RS18905;old_locus_tag=IXO1104_18860 NZ_CP047492.1 Protein Homology CDS 4059142 4059738 . + 0 ID=cds-WP_005925984.1;Parent=gene-IXO1104_RS18905;Dbxref=Genbank:WP_005925984.1;Name=WP_005925984.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367335.1;locus_tag=IXO1104_RS18905;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_005925984.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4059735 4060082 . + . ID=gene-IXO1104_RS18910;Name=IXO1104_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18910;old_locus_tag=IXO1104_18865 NZ_CP047492.1 Protein Homology CDS 4059735 4060082 . + 0 ID=cds-WP_041182600.1;Parent=gene-IXO1104_RS18910;Dbxref=Genbank:WP_041182600.1;Name=WP_041182600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502128.1;locus_tag=IXO1104_RS18910;product=DUF2069 domain-containing protein;protein_id=WP_041182600.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4060212 4060286 . + . ID=gene-IXO1104_RS18915;Name=IXO1104_RS18915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS18915;old_locus_tag=IXO1104_18870 NZ_CP047492.1 cmsearch ncRNA 4060212 4060286 . + . ID=rna-IXO1104_RS18915;Parent=gene-IXO1104_RS18915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18915;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4060212 4060286 . + . ID=exon-IXO1104_RS18915-1;Parent=rna-IXO1104_RS18915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS18915;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4060291 4061511 . - . ID=gene-IXO1104_RS18920;Name=IXO1104_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18920;old_locus_tag=IXO1104_18875 NZ_CP047492.1 Protein Homology CDS 4060291 4061511 . - 0 ID=cds-WP_011409266.1;Parent=gene-IXO1104_RS18920;Dbxref=Genbank:WP_011409266.1;Name=WP_011409266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158669.1;locus_tag=IXO1104_RS18920;product=xylanase;protein_id=WP_011409266.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4062025 4062510 . + . ID=gene-IXO1104_RS18925;Name=IXO1104_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18925;old_locus_tag=IXO1104_18880 NZ_CP047492.1 Protein Homology CDS 4062025 4062510 . + 0 ID=cds-WP_011409267.1;Parent=gene-IXO1104_RS18925;Dbxref=Genbank:WP_011409267.1;Name=WP_011409267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488754.1;locus_tag=IXO1104_RS18925;product=asparaginase domain-containing protein;protein_id=WP_011409267.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4062515 4062988 . + . ID=gene-IXO1104_RS18930;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=IXO1104_RS18930;old_locus_tag=IXO1104_18885 NZ_CP047492.1 Protein Homology CDS 4062515 4062988 . + 0 ID=cds-WP_012444282.1;Parent=gene-IXO1104_RS18930;Dbxref=Genbank:WP_012444282.1;Name=WP_012444282.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988832.1;locus_tag=IXO1104_RS18930;product=Cys-tRNA(Pro) deacylase;protein_id=WP_012444282.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4063196 4064893 . - . ID=gene-IXO1104_RS18935;Name=IXO1104_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18935;old_locus_tag=IXO1104_18890 NZ_CP047492.1 Protein Homology CDS 4063196 4064893 . - 0 ID=cds-WP_027703427.1;Parent=gene-IXO1104_RS18935;Dbxref=Genbank:WP_027703427.1;Name=WP_027703427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850309.1;locus_tag=IXO1104_RS18935;product=S8 family serine peptidase;protein_id=WP_027703427.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4065237 4066601 . - . ID=gene-IXO1104_RS18940;Name=IXO1104_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18940;old_locus_tag=IXO1104_18895 NZ_CP047492.1 Protein Homology CDS 4065237 4066601 . - 0 ID=cds-WP_012444279.1;Parent=gene-IXO1104_RS18940;Dbxref=Genbank:WP_012444279.1;Name=WP_012444279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900706.1;locus_tag=IXO1104_RS18940;product=S8 family peptidase;protein_id=WP_012444279.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4066862 4068030 . - . ID=gene-IXO1104_RS18945;Name=IXO1104_RS18945;end_range=4068030,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS18945;old_locus_tag=IXO1104_18900;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4066862 4068030 . - 0 ID=cds-IXO1104_RS18945;Parent=gene-IXO1104_RS18945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4068030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972507.1;locus_tag=IXO1104_RS18945;partial=true;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4068347 4069432 . - . ID=gene-IXO1104_RS18950;Name=IXO1104_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18950;old_locus_tag=IXO1104_18905 NZ_CP047492.1 Protein Homology CDS 4068347 4069432 . - 0 ID=cds-WP_011260065.1;Parent=gene-IXO1104_RS18950;Dbxref=Genbank:WP_011260065.1;Name=WP_011260065.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036086.1;locus_tag=IXO1104_RS18950;product=branched-chain amino acid aminotransferase;protein_id=WP_011260065.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4069497 4070051 . - . ID=gene-IXO1104_RS18955;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=IXO1104_RS18955;old_locus_tag=IXO1104_18910 NZ_CP047492.1 Protein Homology CDS 4069497 4070051 . - 0 ID=cds-WP_011260066.1;Parent=gene-IXO1104_RS18955;Dbxref=Genbank:WP_011260066.1;Name=WP_011260066.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=sufT;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488784.1;locus_tag=IXO1104_RS18955;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_011260066.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4070238 4070657 . + . ID=gene-IXO1104_RS18960;Name=IXO1104_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18960;old_locus_tag=IXO1104_18915 NZ_CP047492.1 Protein Homology CDS 4070238 4070657 . + 0 ID=cds-WP_011409271.1;Parent=gene-IXO1104_RS18960;Dbxref=Genbank:WP_011409271.1;Name=WP_011409271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156959.1;locus_tag=IXO1104_RS18960;product=hypothetical protein;protein_id=WP_011409271.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4070772 4070996 . - . ID=gene-IXO1104_RS18965;Name=IXO1104_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18965;old_locus_tag=IXO1104_18920 NZ_CP047492.1 Protein Homology CDS 4070772 4070996 . - 0 ID=cds-WP_027703428.1;Parent=gene-IXO1104_RS18965;Dbxref=Genbank:WP_027703428.1;Name=WP_027703428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304579.1;locus_tag=IXO1104_RS18965;product=hypothetical protein;protein_id=WP_027703428.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4071200 4071998 . + . ID=gene-IXO1104_RS18970;Name=IXO1104_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18970;old_locus_tag=IXO1104_18925 NZ_CP047492.1 Protein Homology CDS 4071200 4071471 . + 0 ID=cds-WP_094187731.1-3;Parent=gene-IXO1104_RS18970;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS18970;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4071470 4071998 . + 1 ID=cds-WP_094187731.1-3;Parent=gene-IXO1104_RS18970;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS18970;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4071912 4073399 . - . ID=gene-IXO1104_RS18975;Name=IXO1104_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18975;old_locus_tag=IXO1104_18930 NZ_CP047492.1 Protein Homology CDS 4071912 4073399 . - 0 ID=cds-WP_011260068.1;Parent=gene-IXO1104_RS18975;Dbxref=Genbank:WP_011260068.1;Name=WP_011260068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260068.1;locus_tag=IXO1104_RS18975;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_011260068.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4073396 4073701 . - . ID=gene-IXO1104_RS18980;Name=IXO1104_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18980;old_locus_tag=IXO1104_18935 NZ_CP047492.1 Protein Homology CDS 4073396 4073701 . - 0 ID=cds-WP_011409274.1;Parent=gene-IXO1104_RS18980;Dbxref=Genbank:WP_011409274.1;Name=WP_011409274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488789.1;locus_tag=IXO1104_RS18980;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_011409274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4073825 4074394 . + . ID=gene-IXO1104_RS18985;Name=IXO1104_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18985;old_locus_tag=IXO1104_18940 NZ_CP047492.1 Protein Homology CDS 4073825 4074394 . + 0 ID=cds-WP_012444275.1;Parent=gene-IXO1104_RS18985;Dbxref=Genbank:WP_012444275.1;Name=WP_012444275.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156960.1;locus_tag=IXO1104_RS18985;product=RNA polymerase sigma factor;protein_id=WP_012444275.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4074391 4074741 . + . ID=gene-IXO1104_RS18990;Name=IXO1104_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18990;old_locus_tag=IXO1104_18945 NZ_CP047492.1 Protein Homology CDS 4074391 4074741 . + 0 ID=cds-WP_012444274.1;Parent=gene-IXO1104_RS18990;Dbxref=Genbank:WP_012444274.1;Name=WP_012444274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578132.1;locus_tag=IXO1104_RS18990;product=hypothetical protein;protein_id=WP_012444274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4074747 4075232 . + . ID=gene-IXO1104_RS18995;Name=IXO1104_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS18995;old_locus_tag=IXO1104_18950 NZ_CP047492.1 Protein Homology CDS 4074747 4075232 . + 0 ID=cds-WP_027703741.1;Parent=gene-IXO1104_RS18995;Dbxref=Genbank:WP_027703741.1;Name=WP_027703741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156962.1;locus_tag=IXO1104_RS18995;product=DUF3106 domain-containing protein;protein_id=WP_027703741.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4075630 4076727 . - . ID=gene-IXO1104_RS19000;Name=IXO1104_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19000;old_locus_tag=IXO1104_18955 NZ_CP047492.1 Protein Homology CDS 4075630 4076727 . - 0 ID=cds-WP_011409276.1;Parent=gene-IXO1104_RS19000;Dbxref=Genbank:WP_011409276.1;Name=WP_011409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488800.1;locus_tag=IXO1104_RS19000;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_011409276.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4076873 4079212 . - . ID=gene-IXO1104_RS19005;Name=IXO1104_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19005;old_locus_tag=IXO1104_18960 NZ_CP047492.1 Protein Homology CDS 4076873 4079212 . - 0 ID=cds-WP_011260076.1;Parent=gene-IXO1104_RS19005;Dbxref=Genbank:WP_011260076.1;Name=WP_011260076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915543.1;locus_tag=IXO1104_RS19005;product=DUF1631 domain-containing protein;protein_id=WP_011260076.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4079580 4080155 . + . ID=gene-IXO1104_RS19010;Name=IXO1104_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19010;old_locus_tag=IXO1104_18965 NZ_CP047492.1 Protein Homology CDS 4079580 4080155 . + 0 ID=cds-WP_011409277.1;Parent=gene-IXO1104_RS19010;Dbxref=Genbank:WP_011409277.1;Name=WP_011409277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915539.1;locus_tag=IXO1104_RS19010;product=nitroreductase;protein_id=WP_011409277.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4080152 4081138 . + . ID=gene-IXO1104_RS19015;Name=IXO1104_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19015;old_locus_tag=IXO1104_18970 NZ_CP047492.1 Protein Homology CDS 4080152 4081138 . + 0 ID=cds-WP_011260078.1;Parent=gene-IXO1104_RS19015;Dbxref=Genbank:WP_011260078.1;Name=WP_011260078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156966.1;locus_tag=IXO1104_RS19015;product=exodeoxyribonuclease IX;protein_id=WP_011260078.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4081135 4081686 . + . ID=gene-IXO1104_RS19020;Name=IXO1104_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19020;old_locus_tag=IXO1104_18975 NZ_CP047492.1 Protein Homology CDS 4081135 4081686 . + 0 ID=cds-WP_011260079.1;Parent=gene-IXO1104_RS19020;Dbxref=Genbank:WP_011260079.1;Name=WP_011260079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472542.1;locus_tag=IXO1104_RS19020;product=NUDIX hydrolase;protein_id=WP_011260079.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4081667 4082464 . + . ID=gene-IXO1104_RS19025;Name=IXO1104_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19025;old_locus_tag=IXO1104_18980 NZ_CP047492.1 Protein Homology CDS 4081667 4082464 . + 0 ID=cds-WP_011260080.1;Parent=gene-IXO1104_RS19025;Dbxref=Genbank:WP_011260080.1;Name=WP_011260080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260080.1;locus_tag=IXO1104_RS19025;product=N-formylglutamate amidohydrolase;protein_id=WP_011260080.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4082665 4083606 . - . ID=gene-IXO1104_RS19030;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=IXO1104_RS19030;old_locus_tag=IXO1104_18985 NZ_CP047492.1 Protein Homology CDS 4082665 4083606 . - 0 ID=cds-WP_011260081.1;Parent=gene-IXO1104_RS19030;Dbxref=Genbank:WP_011260081.1;Name=WP_011260081.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811802.1;locus_tag=IXO1104_RS19030;product=prolyl aminopeptidase;protein_id=WP_011260081.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4083695 4084000 . + . ID=gene-IXO1104_RS19035;Name=IXO1104_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19035;old_locus_tag=IXO1104_18990 NZ_CP047492.1 Protein Homology CDS 4083695 4084000 . + 0 ID=cds-WP_011409278.1;Parent=gene-IXO1104_RS19035;Dbxref=Genbank:WP_011409278.1;Name=WP_011409278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304656.1;locus_tag=IXO1104_RS19035;product=hypothetical protein;protein_id=WP_011409278.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4084180 4084491 . + . ID=gene-IXO1104_RS19040;Name=IXO1104_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19040;old_locus_tag=IXO1104_18995 NZ_CP047492.1 Protein Homology CDS 4084180 4084491 . + 0 ID=cds-WP_229002696.1;Parent=gene-IXO1104_RS19040;Dbxref=Genbank:WP_229002696.1;Name=WP_229002696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300205.1;locus_tag=IXO1104_RS19040;product=hypothetical protein;protein_id=WP_229002696.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4084502 4084828 . - . ID=gene-IXO1104_RS19045;Name=IXO1104_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19045;old_locus_tag=IXO1104_19000 NZ_CP047492.1 Protein Homology CDS 4084502 4084828 . - 0 ID=cds-WP_011260082.1;Parent=gene-IXO1104_RS19045;Dbxref=Genbank:WP_011260082.1;Name=WP_011260082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260082.1;locus_tag=IXO1104_RS19045;product=hypothetical protein;protein_id=WP_011260082.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4084872 4085270 . - . ID=gene-IXO1104_RS19050;Name=IXO1104_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19050;old_locus_tag=IXO1104_19005 NZ_CP047492.1 Protein Homology CDS 4084872 4085270 . - 0 ID=cds-WP_011260083.1;Parent=gene-IXO1104_RS19050;Dbxref=Genbank:WP_011260083.1;Name=WP_011260083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260083.1;locus_tag=IXO1104_RS19050;product=hypothetical protein;protein_id=WP_011260083.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4085508 4086353 . - . ID=gene-IXO1104_RS19055;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=IXO1104_RS19055;old_locus_tag=IXO1104_19010 NZ_CP047492.1 Protein Homology CDS 4085508 4086353 . - 0 ID=cds-WP_011260084.1;Parent=gene-IXO1104_RS19055;Dbxref=Genbank:WP_011260084.1;Name=WP_011260084.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304655.1;locus_tag=IXO1104_RS19055;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_011260084.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4086555 4087118 . + . ID=gene-IXO1104_RS19060;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=IXO1104_RS19060;old_locus_tag=IXO1104_19015 NZ_CP047492.1 Protein Homology CDS 4086555 4087118 . + 0 ID=cds-WP_010381556.1;Parent=gene-IXO1104_RS19060;Dbxref=Genbank:WP_010381556.1;Name=WP_010381556.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114658.1;locus_tag=IXO1104_RS19060;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_010381556.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4087314 4088906 . + . ID=gene-IXO1104_RS19065;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=IXO1104_RS19065;old_locus_tag=IXO1104_19020 NZ_CP047492.1 Protein Homology CDS 4087314 4088906 . + 0 ID=cds-WP_011409282.1;Parent=gene-IXO1104_RS19065;Dbxref=Genbank:WP_011409282.1;Name=WP_011409282.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488827.1;locus_tag=IXO1104_RS19065;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_011409282.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4088998 4089939 . + . ID=gene-IXO1104_RS19070;Name=IXO1104_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19070;old_locus_tag=IXO1104_19025 NZ_CP047492.1 Protein Homology CDS 4088998 4089939 . + 0 ID=cds-WP_012444268.1;Parent=gene-IXO1104_RS19070;Dbxref=Genbank:WP_012444268.1;Name=WP_012444268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811807.1;locus_tag=IXO1104_RS19070;product=LysR substrate-binding domain-containing protein;protein_id=WP_012444268.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4090366 4090797 . + . ID=gene-IXO1104_RS19075;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=IXO1104_RS19075;old_locus_tag=IXO1104_19030 NZ_CP047492.1 Protein Homology CDS 4090366 4090797 . + 0 ID=cds-WP_011409284.1;Parent=gene-IXO1104_RS19075;Dbxref=Genbank:WP_011409284.1;Name=WP_011409284.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381561.1;locus_tag=IXO1104_RS19075;product=nucleoside diphosphate kinase regulator;protein_id=WP_011409284.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4090860 4091828 . + . ID=gene-IXO1104_RS19080;Name=IXO1104_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19080;old_locus_tag=IXO1104_19035 NZ_CP047492.1 Protein Homology CDS 4090860 4091828 . + 0 ID=cds-WP_012444266.1;Parent=gene-IXO1104_RS19080;Dbxref=Genbank:WP_012444266.1;Name=WP_012444266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089458.1;locus_tag=IXO1104_RS19080;product=transaldolase;protein_id=WP_012444266.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4092294 4092485 . + . ID=gene-IXO1104_RS19085;Name=IXO1104_RS19085;end_range=4092485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19085;old_locus_tag=IXO1104_19040;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4092294 4092485 . + 0 ID=cds-IXO1104_RS19085;Parent=gene-IXO1104_RS19085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4092485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS19085;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4092492 4093457 . - . ID=gene-IXO1104_RS19090;Name=IXO1104_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19090;old_locus_tag=IXO1104_19045 NZ_CP047492.1 Protein Homology CDS 4092492 4093457 . - 0 ID=cds-WP_109181928.1-4;Parent=gene-IXO1104_RS19090;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS19090;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4093546 4094678 . + . ID=gene-IXO1104_RS19095;Name=IXO1104_RS19095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19095;old_locus_tag=IXO1104_19050;partial=true;pseudo=true;start_range=.,4093546 NZ_CP047492.1 Protein Homology CDS 4093546 4094678 . + 0 ID=cds-IXO1104_RS19095;Parent=gene-IXO1104_RS19095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS19095;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,4093546;transl_table=11 NZ_CP047492.1 RefSeq gene 4094890 4095468 . + . ID=gene-IXO1104_RS19100;Name=IXO1104_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19100;old_locus_tag=IXO1104_19055 NZ_CP047492.1 Protein Homology CDS 4094890 4095468 . + 0 ID=cds-WP_011260092.1;Parent=gene-IXO1104_RS19100;Dbxref=Genbank:WP_011260092.1;Name=WP_011260092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156974.1;locus_tag=IXO1104_RS19100;product=glutamine amidotransferase;protein_id=WP_011260092.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4095884 4096534 . - . ID=gene-IXO1104_RS19105;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19105;old_locus_tag=IXO1104_19060 NZ_CP047492.1 Protein Homology CDS 4095884 4096534 . - 0 ID=cds-WP_011409288.1;Parent=gene-IXO1104_RS19105;Dbxref=Genbank:WP_011409288.1;Name=WP_011409288.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089456.1;locus_tag=IXO1104_RS19105;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_011409288.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4096630 4096875 . - . ID=gene-IXO1104_RS19110;Name=IXO1104_RS19110;end_range=4096875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19110;old_locus_tag=IXO1104_19065;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4096630 4096875 . - 0 ID=cds-IXO1104_RS19110;Parent=gene-IXO1104_RS19110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4096875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160446.1;locus_tag=IXO1104_RS19110;partial=true;product=SgcJ/EcaC family oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4096895 4098109 . - . ID=gene-IXO1104_RS19115;Name=IXO1104_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19115;old_locus_tag=IXO1104_19070 NZ_CP047492.1 Protein Homology CDS 4096895 4098109 . - 0 ID=cds-WP_044756487.1;Parent=gene-IXO1104_RS19115;Dbxref=Genbank:WP_044756487.1;Name=WP_044756487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS19115;product=IS4 family transposase;protein_id=WP_044756487.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4098227 4098505 . - . ID=gene-IXO1104_RS19120;Name=IXO1104_RS19120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19120;old_locus_tag=IXO1104_19075;partial=true;pseudo=true;start_range=.,4098227 NZ_CP047492.1 Protein Homology CDS 4098227 4098505 . - 0 ID=cds-IXO1104_RS19120;Parent=gene-IXO1104_RS19120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160446.1;locus_tag=IXO1104_RS19120;partial=true;product=SgcJ/EcaC family oxidoreductase;pseudo=true;start_range=.,4098227;transl_table=11 NZ_CP047492.1 RefSeq gene 4098630 4099337 . + . ID=gene-IXO1104_RS19125;Name=IXO1104_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19125;old_locus_tag=IXO1104_19080 NZ_CP047492.1 Protein Homology CDS 4098630 4099337 . + 0 ID=cds-WP_075240588.1;Parent=gene-IXO1104_RS19125;Dbxref=Genbank:WP_075240588.1;Name=WP_075240588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994157.1;locus_tag=IXO1104_RS19125;product=response regulator transcription factor;protein_id=WP_075240588.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4099334 4100414 . + . ID=gene-IXO1104_RS19130;Name=IXO1104_RS19130;end_range=4100414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19130;old_locus_tag=IXO1104_19085;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4099334 4100414 . + 0 ID=cds-IXO1104_RS19130;Parent=gene-IXO1104_RS19130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4100414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900734.1;locus_tag=IXO1104_RS19130;partial=true;product=CHASE3 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4100457 4101255 . + . ID=gene-IXO1104_RS19135;Name=IXO1104_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19135;old_locus_tag=IXO1104_19090 NZ_CP047492.1 Protein Homology CDS 4100457 4100728 . + 0 ID=cds-WP_094187801.1;Parent=gene-IXO1104_RS19135;Dbxref=Genbank:WP_094187801.1;Name=WP_094187801.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS19135;product=IS5 family transposase;protein_id=WP_094187801.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4100727 4101255 . + 1 ID=cds-WP_094187801.1;Parent=gene-IXO1104_RS19135;Dbxref=Genbank:WP_094187801.1;Name=WP_094187801.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS19135;product=IS5 family transposase;protein_id=WP_094187801.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4101309 4101665 . + . ID=gene-IXO1104_RS19140;Name=IXO1104_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19140 NZ_CP047492.1 GeneMarkS-2+ CDS 4101309 4101665 . + 0 ID=cds-WP_011407260.1;Parent=gene-IXO1104_RS19140;Dbxref=Genbank:WP_011407260.1;Name=WP_011407260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS19140;product=IS5 family transposase;protein_id=WP_011407260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4101631 4102119 . + . ID=gene-IXO1104_RS19145;Name=IXO1104_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19145 NZ_CP047492.1 GeneMarkS-2+ CDS 4101631 4102119 . + 0 ID=cds-WP_241846860.1;Parent=gene-IXO1104_RS19145;Dbxref=Genbank:WP_241846860.1;Name=WP_241846860.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS19145;product=IS5 family transposase;protein_id=WP_241846860.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4102017 4102934 . + . ID=gene-IXO1104_RS19150;Name=IXO1104_RS19150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19150;old_locus_tag=IXO1104_19100;partial=true;pseudo=true;start_range=.,4102017 NZ_CP047492.1 Protein Homology CDS 4102017 4102934 . + 0 ID=cds-IXO1104_RS19150;Parent=gene-IXO1104_RS19150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900734.1;locus_tag=IXO1104_RS19150;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,4102017;transl_table=11 NZ_CP047492.1 RefSeq gene 4102931 4103395 . + . ID=gene-IXO1104_RS19155;Name=IXO1104_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19155;old_locus_tag=IXO1104_19105 NZ_CP047492.1 Protein Homology CDS 4102931 4103395 . + 0 ID=cds-WP_011409313.1;Parent=gene-IXO1104_RS19155;Dbxref=Genbank:WP_011409313.1;Name=WP_011409313.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367413.1;locus_tag=IXO1104_RS19155;product=response regulator;protein_id=WP_011409313.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4103510 4103746 . - . ID=gene-IXO1104_RS19160;Name=IXO1104_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19160;old_locus_tag=IXO1104_19110 NZ_CP047492.1 Protein Homology CDS 4103510 4103746 . - 0 ID=cds-WP_012444257.1;Parent=gene-IXO1104_RS19160;Dbxref=Genbank:WP_012444257.1;Name=WP_012444257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444257.1;locus_tag=IXO1104_RS19160;product=DUF2007 domain-containing protein;protein_id=WP_012444257.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4103748 4104389 . - . ID=gene-IXO1104_RS19165;Name=IXO1104_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19165;old_locus_tag=IXO1104_19115 NZ_CP047492.1 Protein Homology CDS 4103748 4104389 . - 0 ID=cds-WP_075240758.1;Parent=gene-IXO1104_RS19165;Dbxref=Genbank:WP_075240758.1;Name=WP_075240758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381590.1;locus_tag=IXO1104_RS19165;product=glutathione S-transferase family protein;protein_id=WP_075240758.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4104794 4106533 . + . ID=gene-IXO1104_RS19170;Name=IXO1104_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19170;old_locus_tag=IXO1104_19120 NZ_CP047492.1 Protein Homology CDS 4104794 4106533 . + 0 ID=cds-WP_011260138.1;Parent=gene-IXO1104_RS19170;Dbxref=Genbank:WP_011260138.1;Name=WP_011260138.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449568.1;locus_tag=IXO1104_RS19170;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_011260138.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4106726 4106911 . + . ID=gene-IXO1104_RS19175;Name=IXO1104_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19175 NZ_CP047492.1 Protein Homology CDS 4106726 4106911 . + 0 ID=cds-WP_059317428.1;Parent=gene-IXO1104_RS19175;Dbxref=Genbank:WP_059317428.1;Name=WP_059317428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502089.1;locus_tag=IXO1104_RS19175;product=hypothetical protein;protein_id=WP_059317428.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4106961 4107614 . - . ID=gene-IXO1104_RS19180;Name=IXO1104_RS19180;end_range=4107614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19180;old_locus_tag=IXO1104_19125;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4106961 4107614 . - 0 ID=cds-IXO1104_RS19180;Parent=gene-IXO1104_RS19180;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4107614,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS19180;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4107623 4108386 . - . ID=gene-IXO1104_RS19185;Name=IXO1104_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19185;old_locus_tag=IXO1104_19130 NZ_CP047492.1 Protein Homology CDS 4108071 4108386 . - 0 ID=cds-WP_094187715.1-13;Parent=gene-IXO1104_RS19185;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS19185;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4107623 4108071 . - 2 ID=cds-WP_094187715.1-13;Parent=gene-IXO1104_RS19185;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS19185;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4108591 4108752 . - . ID=gene-IXO1104_RS19190;Name=IXO1104_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19190;old_locus_tag=IXO1104_19135 NZ_CP047492.1 Protein Homology CDS 4108591 4108752 . - 0 ID=cds-WP_115844438.1;Parent=gene-IXO1104_RS19190;Dbxref=Genbank:WP_115844438.1;Name=WP_115844438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=IXO1104_RS19190;product=helix-turn-helix domain-containing protein;protein_id=WP_115844438.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4108854 4108949 . + . ID=gene-IXO1104_RS19195;Name=IXO1104_RS19195;end_range=4108949,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19195;old_locus_tag=IXO1104_19140;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4108854 4108949 . + 0 ID=cds-IXO1104_RS19195;Parent=gene-IXO1104_RS19195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4108949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472687.1;locus_tag=IXO1104_RS19195;partial=true;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4108960 4109759 . - . ID=gene-IXO1104_RS19200;Name=IXO1104_RS19200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19200;old_locus_tag=IXO1104_19145;pseudo=true NZ_CP047492.1 Protein Homology CDS 4108960 4109759 . - 0 ID=cds-IXO1104_RS19200;Parent=gene-IXO1104_RS19200;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS19200;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4109812 4110674 . + . ID=gene-IXO1104_RS19205;Name=IXO1104_RS19205;end_range=4110674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19205;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4109812 4110674 . + 0 ID=cds-IXO1104_RS19205;Parent=gene-IXO1104_RS19205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4110674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965281.1;locus_tag=IXO1104_RS19205;partial=true;product=DMT family transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4111039 4111120 . - . ID=gene-IXO1104_RS19210;Name=IXO1104_RS19210;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19210;old_locus_tag=IXO1104_19160 NZ_CP047492.1 cmsearch ncRNA 4111039 4111120 . - . ID=rna-IXO1104_RS19210;Parent=gene-IXO1104_RS19210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19210;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4111039 4111120 . - . ID=exon-IXO1104_RS19210-1;Parent=rna-IXO1104_RS19210;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19210;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4111357 4111767 . + . ID=gene-IXO1104_RS19215;Name=IXO1104_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19215;old_locus_tag=IXO1104_19165 NZ_CP047492.1 Protein Homology CDS 4111357 4111767 . + 0 ID=cds-WP_011409317.1;Parent=gene-IXO1104_RS19215;Dbxref=Genbank:WP_011409317.1;Name=WP_011409317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112744.1;locus_tag=IXO1104_RS19215;product=hypothetical protein;protein_id=WP_011409317.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4111767 4112327 . + . ID=gene-IXO1104_RS19220;Name=IXO1104_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19220;old_locus_tag=IXO1104_19170 NZ_CP047492.1 Protein Homology CDS 4111767 4112327 . + 0 ID=cds-WP_011409318.1;Parent=gene-IXO1104_RS19220;Dbxref=Genbank:WP_011409318.1;Name=WP_011409318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572602.1;locus_tag=IXO1104_RS19220;product=nucleoside deaminase;protein_id=WP_011409318.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4112364 4113407 . + . ID=gene-IXO1104_RS19225;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=IXO1104_RS19225;old_locus_tag=IXO1104_19175 NZ_CP047492.1 Protein Homology CDS 4112364 4113407 . + 0 ID=cds-WP_011409319.1;Parent=gene-IXO1104_RS19225;Dbxref=Genbank:WP_011409319.1;Name=WP_011409319.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260144.1;locus_tag=IXO1104_RS19225;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_011409319.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4113736 4114845 . - . ID=gene-IXO1104_RS19230;Name=IXO1104_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19230;old_locus_tag=IXO1104_19180 NZ_CP047492.1 Protein Homology CDS 4113736 4114845 . - 0 ID=cds-WP_012444247.1;Parent=gene-IXO1104_RS19230;Dbxref=Genbank:WP_012444247.1;Name=WP_012444247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300569.1;locus_tag=IXO1104_RS19230;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_012444247.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4115069 4115947 . + . ID=gene-IXO1104_RS19235;Name=IXO1104_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19235;old_locus_tag=IXO1104_19185 NZ_CP047492.1 Protein Homology CDS 4115069 4115947 . + 0 ID=cds-WP_012444246.1;Parent=gene-IXO1104_RS19235;Dbxref=Genbank:WP_012444246.1;Name=WP_012444246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157294.1;locus_tag=IXO1104_RS19235;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_012444246.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4116030 4116752 . + . ID=gene-IXO1104_RS19240;Name=IXO1104_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19240;old_locus_tag=IXO1104_19190 NZ_CP047492.1 Protein Homology CDS 4116030 4116752 . + 0 ID=cds-WP_027703838.1;Parent=gene-IXO1104_RS19240;Dbxref=Genbank:WP_027703838.1;Name=WP_027703838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449576.1;locus_tag=IXO1104_RS19240;product=hypothetical protein;protein_id=WP_027703838.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4116952 4117359 . + . ID=gene-IXO1104_RS19245;Name=IXO1104_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19245;old_locus_tag=IXO1104_19195 NZ_CP047492.1 Protein Homology CDS 4116952 4117359 . + 0 ID=cds-WP_011409323.1;Parent=gene-IXO1104_RS19245;Dbxref=Genbank:WP_011409323.1;Name=WP_011409323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157296.1;locus_tag=IXO1104_RS19245;product=hypothetical protein;protein_id=WP_011409323.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4117487 4117960 . + . ID=gene-IXO1104_RS19250;Name=IXO1104_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19250;old_locus_tag=IXO1104_19200 NZ_CP047492.1 Protein Homology CDS 4117487 4117960 . + 0 ID=cds-WP_011260149.1;Parent=gene-IXO1104_RS19250;Dbxref=Genbank:WP_011260149.1;Name=WP_011260149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157297.1;locus_tag=IXO1104_RS19250;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011260149.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4118006 4118833 . + . ID=gene-IXO1104_RS19255;Name=IXO1104_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19255;old_locus_tag=IXO1104_19205 NZ_CP047492.1 Protein Homology CDS 4118006 4118833 . + 0 ID=cds-WP_011260150.1;Parent=gene-IXO1104_RS19255;Dbxref=Genbank:WP_011260150.1;Name=WP_011260150.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572593.1;locus_tag=IXO1104_RS19255;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_011260150.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4118917 4120386 . + . ID=gene-IXO1104_RS19260;Name=IXO1104_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19260;old_locus_tag=IXO1104_19210 NZ_CP047492.1 Protein Homology CDS 4118917 4120386 . + 0 ID=cds-WP_075239769.1;Parent=gene-IXO1104_RS19260;Dbxref=Genbank:WP_075239769.1;Name=WP_075239769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014077148.1;locus_tag=IXO1104_RS19260;product=aldehyde dehydrogenase;protein_id=WP_075239769.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4120589 4122067 . + . ID=gene-IXO1104_RS19265;Name=IXO1104_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19265;old_locus_tag=IXO1104_19215 NZ_CP047492.1 Protein Homology CDS 4120589 4122067 . + 0 ID=cds-WP_044756484.1;Parent=gene-IXO1104_RS19265;Dbxref=Genbank:WP_044756484.1;Name=WP_044756484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367439.1;locus_tag=IXO1104_RS19265;product=AMP-binding protein;protein_id=WP_044756484.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4122252 4123253 . - . ID=gene-IXO1104_RS19270;Name=IXO1104_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19270;old_locus_tag=IXO1104_19220 NZ_CP047492.1 Protein Homology CDS 4122252 4123253 . - 0 ID=cds-WP_011409327.1;Parent=gene-IXO1104_RS19270;Dbxref=Genbank:WP_011409327.1;Name=WP_011409327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970087.1;locus_tag=IXO1104_RS19270;product=LysR substrate-binding domain-containing protein;protein_id=WP_011409327.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4123319 4123679 . - . ID=gene-IXO1104_RS19275;Name=IXO1104_RS19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19275;old_locus_tag=IXO1104_19225;pseudo=true NZ_CP047492.1 Protein Homology CDS 4123319 4123679 . - 0 ID=cds-IXO1104_RS19275;Parent=gene-IXO1104_RS19275;Note=extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols%3B part of the bacterial aromatic compound degradation pathway%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157300.1;locus_tag=IXO1104_RS19275;product=protocatechuate 3%2C4-dioxygenase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4123690 4124586 . - . ID=gene-IXO1104_RS19280;Name=IXO1104_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19280;old_locus_tag=IXO1104_19230 NZ_CP047492.1 Protein Homology CDS 4123690 4124586 . - 0 ID=cds-WP_011260154.1;Parent=gene-IXO1104_RS19280;Dbxref=Genbank:WP_011260154.1;Name=WP_011260154.1;Ontology_term=GO:0006725,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157301.1;locus_tag=IXO1104_RS19280;product=gallate dioxygenase;protein_id=WP_011260154.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4124823 4125285 . + . ID=gene-IXO1104_RS19285;Name=IXO1104_RS19285;end_range=4125285,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19285;old_locus_tag=IXO1104_19235;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4124823 4125285 . + 0 ID=cds-IXO1104_RS19285;Parent=gene-IXO1104_RS19285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4125285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157302.1;locus_tag=IXO1104_RS19285;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4125282 4125665 . - . ID=gene-IXO1104_RS19290;Name=IXO1104_RS19290;end_range=4125665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19290;old_locus_tag=IXO1104_19240;partial=true;pseudo=true;start_range=.,4125282 NZ_CP047492.1 Protein Homology CDS 4125282 4125665 . - 0 ID=cds-IXO1104_RS19290;Parent=gene-IXO1104_RS19290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=4125665,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409255.1;locus_tag=IXO1104_RS19290;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,4125282;transl_table=11 NZ_CP047492.1 RefSeq gene 4125670 4126635 . - . ID=gene-IXO1104_RS19295;Name=IXO1104_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19295;old_locus_tag=IXO1104_19245 NZ_CP047492.1 Protein Homology CDS 4125670 4126635 . - 0 ID=cds-WP_109182027.1-5;Parent=gene-IXO1104_RS19295;Dbxref=Genbank:WP_109182027.1;Name=WP_109182027.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS19295;product=IS1595 family transposase;protein_id=WP_109182027.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4126723 4127244 . - . ID=gene-IXO1104_RS19300;Name=IXO1104_RS19300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19300;old_locus_tag=IXO1104_19250;partial=true;pseudo=true;start_range=.,4126723 NZ_CP047492.1 Protein Homology CDS 4126723 4127244 . - 0 ID=cds-IXO1104_RS19300;Parent=gene-IXO1104_RS19300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445209.1;locus_tag=IXO1104_RS19300;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4126723;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4127361 4128084 . - . ID=gene-IXO1104_RS19305;Name=IXO1104_RS19305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19305;old_locus_tag=IXO1104_19255;pseudo=true NZ_CP047492.1 Protein Homology CDS 4127361 4128084 . - 0 ID=cds-IXO1104_RS19305;Parent=gene-IXO1104_RS19305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089440.1;locus_tag=IXO1104_RS19305;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4128212 4129393 . - . ID=gene-IXO1104_RS19310;Name=IXO1104_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19310;old_locus_tag=IXO1104_19260 NZ_CP047492.1 Protein Homology CDS 4128212 4129393 . - 0 ID=cds-WP_075239523.1;Parent=gene-IXO1104_RS19310;Dbxref=Genbank:WP_075239523.1;Name=WP_075239523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157306.1;locus_tag=IXO1104_RS19310;product=UbiH/UbiF family hydroxylase;protein_id=WP_075239523.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4129390 4130598 . - . ID=gene-IXO1104_RS19315;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=IXO1104_RS19315;old_locus_tag=IXO1104_19265 NZ_CP047492.1 Protein Homology CDS 4129390 4130598 . - 0 ID=cds-WP_011409334.1;Parent=gene-IXO1104_RS19315;Dbxref=Genbank:WP_011409334.1;Name=WP_011409334.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171680.1;locus_tag=IXO1104_RS19315;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_011409334.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4130897 4131475 . + . ID=gene-IXO1104_RS19320;Name=IXO1104_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19320;old_locus_tag=IXO1104_19270 NZ_CP047492.1 Protein Homology CDS 4130897 4131475 . + 0 ID=cds-WP_011260162.1;Parent=gene-IXO1104_RS19320;Dbxref=Genbank:WP_011260162.1;Name=WP_011260162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159102.1;locus_tag=IXO1104_RS19320;product=hypothetical protein;protein_id=WP_011260162.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4131479 4132036 . + . ID=gene-IXO1104_RS19325;Name=IXO1104_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19325;old_locus_tag=IXO1104_19275 NZ_CP047492.1 Protein Homology CDS 4131479 4132036 . + 0 ID=cds-WP_011260163.1;Parent=gene-IXO1104_RS19325;Dbxref=Genbank:WP_011260163.1;Name=WP_011260163.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502064.1;locus_tag=IXO1104_RS19325;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011260163.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4132074 4132982 . + . ID=gene-IXO1104_RS19330;Name=IXO1104_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19330;old_locus_tag=IXO1104_19280 NZ_CP047492.1 Protein Homology CDS 4132074 4132982 . + 0 ID=cds-WP_027704107.1;Parent=gene-IXO1104_RS19330;Dbxref=Genbank:WP_027704107.1;Name=WP_027704107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900762.1;locus_tag=IXO1104_RS19330;product=histone deacetylase family protein;protein_id=WP_027704107.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4133110 4135551 . + . ID=gene-IXO1104_RS19335;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=IXO1104_RS19335;old_locus_tag=IXO1104_19285 NZ_CP047492.1 Protein Homology CDS 4133110 4135551 . + 0 ID=cds-WP_012444236.1;Parent=gene-IXO1104_RS19335;Dbxref=Genbank:WP_012444236.1;Name=WP_012444236.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036030.1;locus_tag=IXO1104_RS19335;product=LPS-assembly protein LptD;protein_id=WP_012444236.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4135548 4136939 . + . ID=gene-IXO1104_RS19340;Name=IXO1104_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19340;old_locus_tag=IXO1104_19290 NZ_CP047492.1 Protein Homology CDS 4135548 4136939 . + 0 ID=cds-WP_011260166.1;Parent=gene-IXO1104_RS19340;Dbxref=Genbank:WP_011260166.1;Name=WP_011260166.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157312.1;locus_tag=IXO1104_RS19340;product=peptidylprolyl isomerase;protein_id=WP_011260166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4136960 4137931 . + . ID=gene-IXO1104_RS19345;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19345;old_locus_tag=IXO1104_19295 NZ_CP047492.1 Protein Homology CDS 4136960 4137931 . + 0 ID=cds-WP_075240487.1;Parent=gene-IXO1104_RS19345;Dbxref=Genbank:WP_075240487.1;Name=WP_075240487.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157313.1;locus_tag=IXO1104_RS19345;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_075240487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4138055 4138130 . + . ID=gene-IXO1104_RS19350;Name=IXO1104_RS19350;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19350;old_locus_tag=IXO1104_19300 NZ_CP047492.1 cmsearch ncRNA 4138055 4138130 . + . ID=rna-IXO1104_RS19350;Parent=gene-IXO1104_RS19350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19350;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4138055 4138130 . + . ID=exon-IXO1104_RS19350-1;Parent=rna-IXO1104_RS19350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19350;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4138188 4138976 . + . ID=gene-IXO1104_RS19355;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19355;old_locus_tag=IXO1104_19305 NZ_CP047492.1 Protein Homology CDS 4138188 4138976 . + 0 ID=cds-WP_011260168.1;Parent=gene-IXO1104_RS19355;Dbxref=Genbank:WP_011260168.1;Name=WP_011260168.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260168.1;locus_tag=IXO1104_RS19355;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011260168.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4139013 4139396 . + . ID=gene-IXO1104_RS19360;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=IXO1104_RS19360;old_locus_tag=IXO1104_19310 NZ_CP047492.1 Protein Homology CDS 4139013 4139396 . + 0 ID=cds-WP_011260169.1;Parent=gene-IXO1104_RS19360;Dbxref=Genbank:WP_011260169.1;Name=WP_011260169.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451488.1;locus_tag=IXO1104_RS19360;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011260169.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4139425 4140381 . + . ID=gene-IXO1104_RS19365;Name=IXO1104_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19365;old_locus_tag=IXO1104_19315 NZ_CP047492.1 Protein Homology CDS 4139425 4140381 . + 0 ID=cds-WP_075239788.1;Parent=gene-IXO1104_RS19365;Dbxref=Genbank:WP_075239788.1;Name=WP_075239788.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157315.1;locus_tag=IXO1104_RS19365;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_075239788.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4140435 4140929 . - . ID=gene-IXO1104_RS19370;Name=IXO1104_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19370;old_locus_tag=IXO1104_19320 NZ_CP047492.1 Protein Homology CDS 4140435 4140929 . - 0 ID=cds-WP_069959986.1;Parent=gene-IXO1104_RS19370;Dbxref=Genbank:WP_069959986.1;Name=WP_069959986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157316.1;locus_tag=IXO1104_RS19370;product=dihydrofolate reductase;protein_id=WP_069959986.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4140926 4141132 . - . ID=gene-IXO1104_RS19375;Name=IXO1104_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19375;old_locus_tag=IXO1104_19325 NZ_CP047492.1 GeneMarkS-2+ CDS 4140926 4141132 . - 0 ID=cds-WP_263117723.1;Parent=gene-IXO1104_RS19375;Dbxref=Genbank:WP_263117723.1;Name=WP_263117723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS19375;product=hypothetical protein;protein_id=WP_263117723.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4141198 4142154 . - . ID=gene-IXO1104_RS19380;Name=IXO1104_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19380;old_locus_tag=IXO1104_19330 NZ_CP047492.1 Protein Homology CDS 4141198 4142154 . - 0 ID=cds-WP_041182545.1-10;Parent=gene-IXO1104_RS19380;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS19380;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4142338 4143132 . - . ID=gene-IXO1104_RS19385;Name=IXO1104_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19385;old_locus_tag=IXO1104_19335 NZ_CP047492.1 Protein Homology CDS 4142338 4143132 . - 0 ID=cds-WP_011260172.1;Parent=gene-IXO1104_RS19385;Dbxref=Genbank:WP_011260172.1;Name=WP_011260172.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260172.1;locus_tag=IXO1104_RS19385;product=thymidylate synthase;protein_id=WP_011260172.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4143129 4144019 . - . ID=gene-IXO1104_RS19390;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=IXO1104_RS19390;old_locus_tag=IXO1104_19340 NZ_CP047492.1 Protein Homology CDS 4143129 4144019 . - 0 ID=cds-WP_011260173.1;Parent=gene-IXO1104_RS19390;Dbxref=Genbank:WP_011260173.1;Name=WP_011260173.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945080.1;locus_tag=IXO1104_RS19390;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_011260173.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4144074 4144565 . - . ID=gene-IXO1104_RS19395;Name=IXO1104_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19395;old_locus_tag=IXO1104_19345 NZ_CP047492.1 Protein Homology CDS 4144074 4144565 . - 0 ID=cds-WP_011260174.1;Parent=gene-IXO1104_RS19395;Dbxref=Genbank:WP_011260174.1;Name=WP_011260174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972126.1;locus_tag=IXO1104_RS19395;product=TPM domain-containing protein;protein_id=WP_011260174.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4144565 4145455 . - . ID=gene-IXO1104_RS19400;Name=IXO1104_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19400;old_locus_tag=IXO1104_19350 NZ_CP047492.1 Protein Homology CDS 4144565 4145455 . - 0 ID=cds-WP_027704105.1;Parent=gene-IXO1104_RS19400;Dbxref=Genbank:WP_027704105.1;Name=WP_027704105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472553.1;locus_tag=IXO1104_RS19400;product=TPM domain-containing protein;protein_id=WP_027704105.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4145793 4146431 . - . ID=gene-IXO1104_RS19405;Name=IXO1104_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19405;old_locus_tag=IXO1104_19355 NZ_CP047492.1 Protein Homology CDS 4145793 4146431 . - 0 ID=cds-WP_011409343.1;Parent=gene-IXO1104_RS19405;Dbxref=Genbank:WP_011409343.1;Name=WP_011409343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381647.1;locus_tag=IXO1104_RS19405;product=LemA family protein;protein_id=WP_011409343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4146527 4146907 . - . ID=gene-IXO1104_RS19410;Name=IXO1104_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19410;old_locus_tag=IXO1104_19360 NZ_CP047492.1 Protein Homology CDS 4146527 4146907 . - 0 ID=cds-WP_011409344.1;Parent=gene-IXO1104_RS19410;Dbxref=Genbank:WP_011409344.1;Name=WP_011409344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573596.1;locus_tag=IXO1104_RS19410;product=diacylglycerol kinase;protein_id=WP_011409344.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4147090 4147791 . + . ID=gene-IXO1104_RS19415;Name=IXO1104_RS19415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19415;old_locus_tag=IXO1104_19365;pseudo=true NZ_CP047492.1 Protein Homology CDS 4147090 4147791 . + 0 ID=cds-IXO1104_RS19415;Parent=gene-IXO1104_RS19415;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157323.1;locus_tag=IXO1104_RS19415;product=SGNH/GDSL hydrolase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4147834 4149048 . - . ID=gene-IXO1104_RS19420;Name=IXO1104_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19420;old_locus_tag=IXO1104_19370 NZ_CP047492.1 Protein Homology CDS 4147834 4149048 . - 0 ID=cds-WP_154741246.1;Parent=gene-IXO1104_RS19420;Dbxref=Genbank:WP_154741246.1;Name=WP_154741246.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS19420;product=IS4 family transposase;protein_id=WP_154741246.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4149291 4149367 . - . ID=gene-IXO1104_RS19425;Name=IXO1104_RS19425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19425;old_locus_tag=IXO1104_19375 NZ_CP047492.1 cmsearch ncRNA 4149291 4149367 . - . ID=rna-IXO1104_RS19425;Parent=gene-IXO1104_RS19425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19425;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4149291 4149367 . - . ID=exon-IXO1104_RS19425-1;Parent=rna-IXO1104_RS19425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19425;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4149725 4150996 . - . ID=gene-IXO1104_RS19430;Name=IXO1104_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19430;old_locus_tag=IXO1104_19380 NZ_CP047492.1 Protein Homology CDS 4149725 4150996 . - 0 ID=cds-WP_011409346.1;Parent=gene-IXO1104_RS19430;Dbxref=Genbank:WP_011409346.1;Name=WP_011409346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900779.1;locus_tag=IXO1104_RS19430;product=HAMP domain-containing histidine kinase;protein_id=WP_011409346.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4151139 4151852 . - . ID=gene-IXO1104_RS19435;Name=IXO1104_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19435;old_locus_tag=IXO1104_19385 NZ_CP047492.1 Protein Homology CDS 4151139 4151852 . - 0 ID=cds-WP_002811889.1;Parent=gene-IXO1104_RS19435;Dbxref=Genbank:WP_002811889.1;Name=WP_002811889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661106.1;locus_tag=IXO1104_RS19435;product=response regulator transcription factor;protein_id=WP_002811889.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4151944 4152612 . - . ID=gene-IXO1104_RS19440;Name=IXO1104_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19440;old_locus_tag=IXO1104_19390 NZ_CP047492.1 Protein Homology CDS 4151944 4152612 . - 0 ID=cds-WP_011260184.1;Parent=gene-IXO1104_RS19440;Dbxref=Genbank:WP_011260184.1;Name=WP_011260184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260184.1;locus_tag=IXO1104_RS19440;product=arylesterase;protein_id=WP_011260184.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4152722 4153321 . + . ID=gene-IXO1104_RS19445;Name=IXO1104_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19445;old_locus_tag=IXO1104_19395 NZ_CP047492.1 Protein Homology CDS 4152722 4153321 . + 0 ID=cds-WP_011409347.1;Parent=gene-IXO1104_RS19445;Dbxref=Genbank:WP_011409347.1;Name=WP_011409347.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381667.1;locus_tag=IXO1104_RS19445;product=ATP-binding cassette domain-containing protein;protein_id=WP_011409347.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4153318 4155801 . + . ID=gene-IXO1104_RS19450;Name=IXO1104_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19450;old_locus_tag=IXO1104_19400 NZ_CP047492.1 Protein Homology CDS 4153318 4155801 . + 0 ID=cds-WP_075240686.1;Parent=gene-IXO1104_RS19450;Dbxref=Genbank:WP_075240686.1;Name=WP_075240686.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485158.1;locus_tag=IXO1104_RS19450;product=FtsX-like permease family protein;protein_id=WP_075240686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4156115 4157032 . + . ID=gene-IXO1104_RS19455;Name=IXO1104_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19455;old_locus_tag=IXO1104_19405 NZ_CP047492.1 Protein Homology CDS 4156115 4157032 . + 0 ID=cds-WP_075240687.1;Parent=gene-IXO1104_RS19455;Dbxref=Genbank:WP_075240687.1;Name=WP_075240687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409349.1;locus_tag=IXO1104_RS19455;product=TauD/TfdA family dioxygenase;protein_id=WP_075240687.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4157074 4158120 . + . ID=gene-IXO1104_RS19460;Name=IXO1104_RS19460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19460;old_locus_tag=IXO1104_19410;pseudo=true NZ_CP047492.1 Protein Homology CDS 4157074 4158120 . + 0 ID=cds-IXO1104_RS19460;Parent=gene-IXO1104_RS19460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346464.1;locus_tag=IXO1104_RS19460;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4158124 4158958 . + . ID=gene-IXO1104_RS19465;Name=IXO1104_RS19465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19465;old_locus_tag=IXO1104_19415;pseudo=true NZ_CP047492.1 Protein Homology CDS 4158124 4158958 . + 0 ID=cds-IXO1104_RS19465;Parent=gene-IXO1104_RS19465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972117.1;locus_tag=IXO1104_RS19465;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4158955 4159840 . + . ID=gene-IXO1104_RS19470;Name=IXO1104_RS19470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19470;old_locus_tag=IXO1104_19420;pseudo=true NZ_CP047492.1 Protein Homology CDS 4158955 4159840 . + 0 ID=cds-IXO1104_RS19470;Parent=gene-IXO1104_RS19470;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160361.1;locus_tag=IXO1104_RS19470;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4159923 4160276 . + . ID=gene-IXO1104_RS19475;Name=IXO1104_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19475;old_locus_tag=IXO1104_19425 NZ_CP047492.1 Protein Homology CDS 4159923 4160276 . + 0 ID=cds-WP_011260188.1;Parent=gene-IXO1104_RS19475;Dbxref=Genbank:WP_011260188.1;Name=WP_011260188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303348.1;locus_tag=IXO1104_RS19475;product=DMT family protein;protein_id=WP_011260188.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4160345 4160419 . + . ID=gene-IXO1104_RS19480;Name=IXO1104_RS19480;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19480;old_locus_tag=IXO1104_19430 NZ_CP047492.1 cmsearch ncRNA 4160345 4160419 . + . ID=rna-IXO1104_RS19480;Parent=gene-IXO1104_RS19480;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19480;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4160345 4160419 . + . ID=exon-IXO1104_RS19480-1;Parent=rna-IXO1104_RS19480;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19480;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4160439 4160515 . - . ID=gene-IXO1104_RS19485;Name=IXO1104_RS19485;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19485;old_locus_tag=IXO1104_19435 NZ_CP047492.1 cmsearch ncRNA 4160439 4160515 . - . ID=rna-IXO1104_RS19485;Parent=gene-IXO1104_RS19485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19485;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4160439 4160515 . - . ID=exon-IXO1104_RS19485-1;Parent=rna-IXO1104_RS19485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19485;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4160578 4161225 . - . ID=gene-IXO1104_RS19490;Name=IXO1104_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19490;old_locus_tag=IXO1104_19440 NZ_CP047492.1 Protein Homology CDS 4160578 4161225 . - 0 ID=cds-WP_011260189.1;Parent=gene-IXO1104_RS19490;Dbxref=Genbank:WP_011260189.1;Name=WP_011260189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409353.1;locus_tag=IXO1104_RS19490;product=hypothetical protein;protein_id=WP_011260189.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4161762 4161838 . + . ID=gene-IXO1104_RS19495;Name=IXO1104_RS19495;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19495;old_locus_tag=IXO1104_19445 NZ_CP047492.1 cmsearch ncRNA 4161762 4161838 . + . ID=rna-IXO1104_RS19495;Parent=gene-IXO1104_RS19495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19495;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4161762 4161838 . + . ID=exon-IXO1104_RS19495-1;Parent=rna-IXO1104_RS19495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19495;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4161862 4162101 . - . ID=gene-IXO1104_RS19500;Name=IXO1104_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19500;old_locus_tag=IXO1104_19450 NZ_CP047492.1 Protein Homology CDS 4161862 4162101 . - 0 ID=cds-WP_027704205.1;Parent=gene-IXO1104_RS19500;Dbxref=Genbank:WP_027704205.1;Name=WP_027704205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269995.1;locus_tag=IXO1104_RS19500;product=hemin uptake protein HemP;protein_id=WP_027704205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4162482 4163450 . - . ID=gene-IXO1104_RS19505;Name=IXO1104_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19505;old_locus_tag=IXO1104_19455 NZ_CP047492.1 Protein Homology CDS 4162482 4163450 . - 0 ID=cds-WP_011409354.1;Parent=gene-IXO1104_RS19505;Dbxref=Genbank:WP_011409354.1;Name=WP_011409354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930920.1;locus_tag=IXO1104_RS19505;product=aldo/keto reductase;protein_id=WP_011409354.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4163975 4164349 . + . ID=gene-IXO1104_RS19510;Name=IXO1104_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19510;old_locus_tag=IXO1104_19460 NZ_CP047492.1 GeneMarkS-2+ CDS 4163975 4164349 . + 0 ID=cds-WP_153303323.1;Parent=gene-IXO1104_RS19510;Dbxref=Genbank:WP_153303323.1;Name=WP_153303323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS19510;product=hypothetical protein;protein_id=WP_153303323.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4164649 4165947 . + . ID=gene-IXO1104_RS19515;Name=IXO1104_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19515;old_locus_tag=IXO1104_19465 NZ_CP047492.1 Protein Homology CDS 4164649 4165947 . + 0 ID=cds-WP_011409355.1;Parent=gene-IXO1104_RS19515;Dbxref=Genbank:WP_011409355.1;Name=WP_011409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304462.1;locus_tag=IXO1104_RS19515;product=nucleoside transporter NupC;protein_id=WP_011409355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4166039 4166989 . + . ID=gene-IXO1104_RS19520;Name=IXO1104_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19520;old_locus_tag=IXO1104_19470 NZ_CP047492.1 Protein Homology CDS 4166039 4166989 . + 0 ID=cds-WP_011409356.1;Parent=gene-IXO1104_RS19520;Dbxref=Genbank:WP_011409356.1;Name=WP_011409356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167865.1;locus_tag=IXO1104_RS19520;product=ribokinase;protein_id=WP_011409356.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4167670 4169763 . + . ID=gene-IXO1104_RS19525;Name=IXO1104_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19525;old_locus_tag=IXO1104_19475 NZ_CP047492.1 Protein Homology CDS 4167670 4169763 . + 0 ID=cds-WP_027704209.1;Parent=gene-IXO1104_RS19525;Dbxref=Genbank:WP_027704209.1;Name=WP_027704209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930931.1;locus_tag=IXO1104_RS19525;product=carbohydrate-binding protein;protein_id=WP_027704209.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4169873 4170871 . + . ID=gene-IXO1104_RS19530;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=IXO1104_RS19530;old_locus_tag=IXO1104_19480 NZ_CP047492.1 Protein Homology CDS 4169873 4170871 . + 0 ID=cds-WP_011260196.1;Parent=gene-IXO1104_RS19530;Dbxref=Genbank:WP_011260196.1;Name=WP_011260196.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050554.1;locus_tag=IXO1104_RS19530;product=tRNA dihydrouridine synthase DusB;protein_id=WP_011260196.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4170899 4171721 . + . ID=gene-IXO1104_RS19535;Name=IXO1104_RS19535;end_range=4171721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19535;old_locus_tag=IXO1104_19485;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4170899 4171721 . + 0 ID=cds-IXO1104_RS19535;Parent=gene-IXO1104_RS19535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008168;end_range=4171721,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485197.1;locus_tag=IXO1104_RS19535;partial=true;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4171718 4172814 . - . ID=gene-IXO1104_RS19540;Name=IXO1104_RS19540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19540;old_locus_tag=IXO1104_19490;pseudo=true NZ_CP047492.1 Protein Homology CDS 4171718 4172814 . - 0 ID=cds-IXO1104_RS19540;Parent=gene-IXO1104_RS19540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970626.1;locus_tag=IXO1104_RS19540;product=metal-dependent hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4173060 4174271 . + . ID=gene-IXO1104_RS19545;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=IXO1104_RS19545;old_locus_tag=IXO1104_19495 NZ_CP047492.1 Protein Homology CDS 4173060 4174271 . + 0 ID=cds-WP_005910819.1;Parent=gene-IXO1104_RS19545;Dbxref=Genbank:WP_005910819.1;Name=WP_005910819.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=IXO1104_RS19545;product=methionine adenosyltransferase;protein_id=WP_005910819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4174616 4176214 . - . ID=gene-IXO1104_RS19550;Name=IXO1104_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19550;old_locus_tag=IXO1104_19500 NZ_CP047492.1 Protein Homology CDS 4174616 4176214 . - 0 ID=cds-WP_069960259.1;Parent=gene-IXO1104_RS19550;Dbxref=Genbank:WP_069960259.1;Name=WP_069960259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159806.1;locus_tag=IXO1104_RS19550;product=histidine-type phosphatase;protein_id=WP_069960259.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4176204 4178975 . - . ID=gene-IXO1104_RS19555;Name=IXO1104_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19555;old_locus_tag=IXO1104_19505 NZ_CP047492.1 Protein Homology CDS 4176204 4178975 . - 0 ID=cds-WP_075240465.1;Parent=gene-IXO1104_RS19555;Dbxref=Genbank:WP_075240465.1;Name=WP_075240465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910823.1;locus_tag=IXO1104_RS19555;product=TonB-dependent receptor;protein_id=WP_075240465.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4178974 4179211 . + . ID=gene-IXO1104_RS19560;Name=IXO1104_RS19560;end_range=4179211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19560;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4178974 4179211 . + 0 ID=cds-IXO1104_RS19560;Parent=gene-IXO1104_RS19560;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4179211,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155362.1;locus_tag=IXO1104_RS19560;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4179449 4180423 . + . ID=gene-IXO1104_RS19565;Name=IXO1104_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19565;old_locus_tag=IXO1104_19510 NZ_CP047492.1 Protein Homology CDS 4179449 4180423 . + 0 ID=cds-WP_069960260.1;Parent=gene-IXO1104_RS19565;Dbxref=Genbank:WP_069960260.1;Name=WP_069960260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113643.1;locus_tag=IXO1104_RS19565;product=hypothetical protein;protein_id=WP_069960260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4180487 4181044 . - . ID=gene-IXO1104_RS19570;Name=IXO1104_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19570;old_locus_tag=IXO1104_19515 NZ_CP047492.1 Protein Homology CDS 4180487 4181044 . - 0 ID=cds-WP_024710449.1;Parent=gene-IXO1104_RS19570;Dbxref=Genbank:WP_024710449.1;Name=WP_024710449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112764.1;locus_tag=IXO1104_RS19570;product=TetR/AcrR family transcriptional regulator;protein_id=WP_024710449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4181182 4183896 . - . ID=gene-IXO1104_RS19575;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=IXO1104_RS19575;old_locus_tag=IXO1104_19520 NZ_CP047492.1 Protein Homology CDS 4181182 4183896 . - 0 ID=cds-WP_075240072.1;Parent=gene-IXO1104_RS19575;Dbxref=Genbank:WP_075240072.1;Name=WP_075240072.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155365.1;locus_tag=IXO1104_RS19575;product=phosphoenolpyruvate carboxylase;protein_id=WP_075240072.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4184225 4184548 . - . ID=gene-IXO1104_RS19580;Name=IXO1104_RS19580;end_range=4184548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19580;partial=true;pseudo=true;start_range=.,4184225 NZ_CP047492.1 Protein Homology CDS 4184225 4184548 . - 0 ID=cds-IXO1104_RS19580;Parent=gene-IXO1104_RS19580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=4184548,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158615.1;locus_tag=IXO1104_RS19580;partial=true;product=prolyl oligopeptidase family serine peptidase;pseudo=true;start_range=.,4184225;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 4184801 4184916 . + . ID=id-NZ_CP047492.1:4184801..4184916;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 4184949 4186391 . + . ID=gene-IXO1104_RS19585;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=IXO1104_RS19585;old_locus_tag=IXO1104_19530 NZ_CP047492.1 Protein Homology CDS 4184949 4186391 . + 0 ID=cds-WP_011260204.1;Parent=gene-IXO1104_RS19585;Dbxref=Genbank:WP_011260204.1;Name=WP_011260204.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035988.1;locus_tag=IXO1104_RS19585;product=adenosylhomocysteinase;protein_id=WP_011260204.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4186623 4187408 . - . ID=gene-IXO1104_RS19590;Name=IXO1104_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19590;old_locus_tag=IXO1104_19535 NZ_CP047492.1 Protein Homology CDS 4186623 4187408 . - 0 ID=cds-WP_012444205.1;Parent=gene-IXO1104_RS19590;Dbxref=Genbank:WP_012444205.1;Name=WP_012444205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160285.1;locus_tag=IXO1104_RS19590;product=class I SAM-dependent methyltransferase;protein_id=WP_012444205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4187440 4188372 . - . ID=gene-IXO1104_RS19595;Name=IXO1104_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19595;old_locus_tag=IXO1104_19540 NZ_CP047492.1 Protein Homology CDS 4187440 4188372 . - 0 ID=cds-WP_011260206.1;Parent=gene-IXO1104_RS19595;Dbxref=Genbank:WP_011260206.1;Name=WP_011260206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155369.1;locus_tag=IXO1104_RS19595;product=sulfotransferase domain-containing protein;protein_id=WP_011260206.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4188863 4189549 . - . ID=gene-IXO1104_RS19600;Name=IXO1104_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19600;old_locus_tag=IXO1104_19545 NZ_CP047492.1 Protein Homology CDS 4188863 4189549 . - 0 ID=cds-WP_075238977.1;Parent=gene-IXO1104_RS19600;Dbxref=Genbank:WP_075238977.1;Name=WP_075238977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155370.1;locus_tag=IXO1104_RS19600;product=hypothetical protein;protein_id=WP_075238977.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4189700 4190257 . - . ID=gene-IXO1104_RS19605;Name=IXO1104_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19605;old_locus_tag=IXO1104_19550 NZ_CP047492.1 Protein Homology CDS 4189700 4190257 . - 0 ID=cds-WP_075238978.1;Parent=gene-IXO1104_RS19605;Dbxref=Genbank:WP_075238978.1;Name=WP_075238978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158826.1;locus_tag=IXO1104_RS19605;product=DUF3228 family protein;protein_id=WP_075238978.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4190486 4191031 . - . ID=gene-IXO1104_RS19610;Name=IXO1104_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19610;old_locus_tag=IXO1104_19555 NZ_CP047492.1 Protein Homology CDS 4190486 4191031 . - 0 ID=cds-WP_011260209.1;Parent=gene-IXO1104_RS19610;Dbxref=Genbank:WP_011260209.1;Name=WP_011260209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260209.1;locus_tag=IXO1104_RS19610;product=DUF2058 domain-containing protein;protein_id=WP_011260209.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4191850 4191926 . - . ID=gene-IXO1104_RS19615;Name=IXO1104_RS19615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19615;old_locus_tag=IXO1104_19565 NZ_CP047492.1 cmsearch ncRNA 4191850 4191926 . - . ID=rna-IXO1104_RS19615;Parent=gene-IXO1104_RS19615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19615;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4191850 4191926 . - . ID=exon-IXO1104_RS19615-1;Parent=rna-IXO1104_RS19615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19615;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4192351 4193286 . - . ID=gene-IXO1104_RS19620;Name=IXO1104_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19620;old_locus_tag=IXO1104_19570 NZ_CP047492.1 Protein Homology CDS 4192351 4193286 . - 0 ID=cds-WP_075240461.1;Parent=gene-IXO1104_RS19620;Dbxref=Genbank:WP_075240461.1;Name=WP_075240461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485244.1;locus_tag=IXO1104_RS19620;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_075240461.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4193664 4194067 . + . ID=gene-IXO1104_RS19625;Name=IXO1104_RS19625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19625;old_locus_tag=IXO1104_19575;pseudo=true NZ_CP047492.1 Protein Homology CDS 4193664 4194067 . + 0 ID=cds-IXO1104_RS19625;Parent=gene-IXO1104_RS19625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968728.1;locus_tag=IXO1104_RS19625;product=VOC family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4194147 4194677 . - . ID=gene-IXO1104_RS19630;Name=IXO1104_RS19630;end_range=4194677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19630;old_locus_tag=IXO1104_19580;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4194147 4194677 . - 0 ID=cds-IXO1104_RS19630;Parent=gene-IXO1104_RS19630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=4194677,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160284.1;locus_tag=IXO1104_RS19630;partial=true;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4194974 4195951 . - . ID=gene-IXO1104_RS19635;Name=IXO1104_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19635;old_locus_tag=IXO1104_19585 NZ_CP047492.1 Protein Homology CDS 4194974 4195951 . - 0 ID=cds-WP_011260213.1;Parent=gene-IXO1104_RS19635;Dbxref=Genbank:WP_011260213.1;Name=WP_011260213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812340.1;locus_tag=IXO1104_RS19635;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_011260213.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4196442 4197824 . + . ID=gene-IXO1104_RS19640;Name=IXO1104_RS19640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19640;old_locus_tag=IXO1104_19590;pseudo=true NZ_CP047492.1 Protein Homology CDS 4196442 4197824 . + 0 ID=cds-IXO1104_RS19640;Parent=gene-IXO1104_RS19640;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346430.1;locus_tag=IXO1104_RS19640;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4197864 4198691 . + . ID=gene-IXO1104_RS19645;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=IXO1104_RS19645;old_locus_tag=IXO1104_19595 NZ_CP047492.1 Protein Homology CDS 4197864 4198691 . + 0 ID=cds-WP_011260216.1;Parent=gene-IXO1104_RS19645;Dbxref=Genbank:WP_011260216.1;Name=WP_011260216.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155379.1;locus_tag=IXO1104_RS19645;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_011260216.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4198874 4198950 . + . ID=gene-IXO1104_RS19650;Name=IXO1104_RS19650;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS19650;old_locus_tag=IXO1104_19600 NZ_CP047492.1 cmsearch ncRNA 4198874 4198950 . + . ID=rna-IXO1104_RS19650;Parent=gene-IXO1104_RS19650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19650;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4198874 4198950 . + . ID=exon-IXO1104_RS19650-1;Parent=rna-IXO1104_RS19650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19650;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4199064 4199651 . + . ID=gene-IXO1104_RS19655;Name=IXO1104_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19655;old_locus_tag=IXO1104_19605 NZ_CP047492.1 Protein Homology CDS 4199064 4199651 . + 0 ID=cds-WP_011260218.1;Parent=gene-IXO1104_RS19655;Dbxref=Genbank:WP_011260218.1;Name=WP_011260218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155380.1;locus_tag=IXO1104_RS19655;product=hypothetical protein;protein_id=WP_011260218.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4199837 4200784 . - . ID=gene-IXO1104_RS19660;Name=IXO1104_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19660;old_locus_tag=IXO1104_19610 NZ_CP047492.1 Protein Homology CDS 4199837 4200784 . - 0 ID=cds-WP_011260220.1;Parent=gene-IXO1104_RS19660;Dbxref=Genbank:WP_011260220.1;Name=WP_011260220.1;Ontology_term=GO:0008413;gbkey=CDS;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910877.1;locus_tag=IXO1104_RS19660;product=Nudix family hydrolase;protein_id=WP_011260220.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4200925 4201293 . - . ID=gene-IXO1104_RS19665;Name=IXO1104_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19665;old_locus_tag=IXO1104_19615 NZ_CP047492.1 Protein Homology CDS 4200925 4201293 . - 0 ID=cds-WP_011409371.1;Parent=gene-IXO1104_RS19665;Dbxref=Genbank:WP_011409371.1;Name=WP_011409371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506680.1;locus_tag=IXO1104_RS19665;product=glyoxalase;protein_id=WP_011409371.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4201758 4204496 . - . ID=gene-IXO1104_RS19670;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19670;old_locus_tag=IXO1104_19620 NZ_CP047492.1 Protein Homology CDS 4201758 4204496 . - 0 ID=cds-WP_012444193.1;Parent=gene-IXO1104_RS19670;Dbxref=Genbank:WP_012444193.1;Name=WP_012444193.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112773.1;locus_tag=IXO1104_RS19670;product=preprotein translocase subunit SecA;protein_id=WP_012444193.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4204653 4205594 . - . ID=gene-IXO1104_RS19675;Name=IXO1104_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19675;old_locus_tag=IXO1104_19625 NZ_CP047492.1 Protein Homology CDS 4204653 4205594 . - 0 ID=cds-WP_011409372.1;Parent=gene-IXO1104_RS19675;Dbxref=Genbank:WP_011409372.1;Name=WP_011409372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158828.1;locus_tag=IXO1104_RS19675;product=M23 family metallopeptidase;protein_id=WP_011409372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4205595 4206041 . + . ID=gene-IXO1104_RS19680;Name=IXO1104_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19680;old_locus_tag=IXO1104_19630 NZ_CP047492.1 Protein Homology CDS 4205595 4206041 . + 0 ID=cds-WP_011260224.1;Parent=gene-IXO1104_RS19680;Dbxref=Genbank:WP_011260224.1;Name=WP_011260224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571812.1;locus_tag=IXO1104_RS19680;product=DUF721 domain-containing protein;protein_id=WP_011260224.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4206228 4207139 . - . ID=gene-IXO1104_RS19685;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=IXO1104_RS19685;old_locus_tag=IXO1104_19635 NZ_CP047492.1 Protein Homology CDS 4206228 4207139 . - 0 ID=cds-WP_011260225.1;Parent=gene-IXO1104_RS19685;Dbxref=Genbank:WP_011260225.1;Name=WP_011260225.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237961.1;locus_tag=IXO1104_RS19685;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_011260225.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4207376 4208620 . - . ID=gene-IXO1104_RS19690;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS19690;old_locus_tag=IXO1104_19640 NZ_CP047492.1 Protein Homology CDS 4207376 4208620 . - 0 ID=cds-WP_011260226.1;Parent=gene-IXO1104_RS19690;Dbxref=Genbank:WP_011260226.1;Name=WP_011260226.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170527.1;locus_tag=IXO1104_RS19690;product=cell division protein FtsZ;protein_id=WP_011260226.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4208923 4210158 . - . ID=gene-IXO1104_RS19695;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19695;old_locus_tag=IXO1104_19645 NZ_CP047492.1 Protein Homology CDS 4208923 4210158 . - 0 ID=cds-WP_012444190.1;Parent=gene-IXO1104_RS19695;Dbxref=Genbank:WP_012444190.1;Name=WP_012444190.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=IXO1104_RS19695;product=cell division protein FtsA;protein_id=WP_012444190.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4210155 4210976 . - . ID=gene-IXO1104_RS19700;Name=IXO1104_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19700;old_locus_tag=IXO1104_19650 NZ_CP047492.1 Protein Homology CDS 4210155 4210976 . - 0 ID=cds-WP_011409373.1;Parent=gene-IXO1104_RS19700;Dbxref=Genbank:WP_011409373.1;Name=WP_011409373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155388.1;locus_tag=IXO1104_RS19700;product=cell division protein FtsQ/DivIB;protein_id=WP_011409373.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4211101 4212057 . - . ID=gene-IXO1104_RS19705;Name=IXO1104_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19705;old_locus_tag=IXO1104_19655 NZ_CP047492.1 Protein Homology CDS 4211101 4212057 . - 0 ID=cds-WP_011409374.1;Parent=gene-IXO1104_RS19705;Dbxref=Genbank:WP_011409374.1;Name=WP_011409374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485275.1;locus_tag=IXO1104_RS19705;product=D-alanine--D-alanine ligase;protein_id=WP_011409374.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4212054 4213487 . - . ID=gene-IXO1104_RS19710;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=IXO1104_RS19710;old_locus_tag=IXO1104_19660 NZ_CP047492.1 Protein Homology CDS 4212054 4213487 . - 0 ID=cds-WP_011409375.1;Parent=gene-IXO1104_RS19710;Dbxref=Genbank:WP_011409375.1;Name=WP_011409375.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165008.1;locus_tag=IXO1104_RS19710;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_011409375.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4213484 4214809 . - . ID=gene-IXO1104_RS19715;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=IXO1104_RS19715;old_locus_tag=IXO1104_19665 NZ_CP047492.1 Protein Homology CDS 4213484 4214809 . - 0 ID=cds-WP_011409376.1;Parent=gene-IXO1104_RS19715;Dbxref=Genbank:WP_011409376.1;Name=WP_011409376.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260230.1;locus_tag=IXO1104_RS19715;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_011409376.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4214806 4216179 . - . ID=gene-IXO1104_RS19720;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=IXO1104_RS19720;old_locus_tag=IXO1104_19670 NZ_CP047492.1 Protein Homology CDS 4214806 4216179 . - 0 ID=cds-WP_011409377.1;Parent=gene-IXO1104_RS19720;Dbxref=Genbank:WP_011409377.1;Name=WP_011409377.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016021;gbkey=CDS;gene=ftsW;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155392.1;locus_tag=IXO1104_RS19720;product=putative lipid II flippase FtsW;protein_id=WP_011409377.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4216179 4217264 . - . ID=gene-IXO1104_RS19725;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=IXO1104_RS19725;old_locus_tag=IXO1104_19675 NZ_CP047492.1 Protein Homology CDS 4216179 4217264 . - 0 ID=cds-WP_012444187.1;Parent=gene-IXO1104_RS19725;Dbxref=Genbank:WP_012444187.1;Name=WP_012444187.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=IXO1104_RS19725;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_012444187.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4217254 4218765 . - . ID=gene-IXO1104_RS19730;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=IXO1104_RS19730;old_locus_tag=IXO1104_19680 NZ_CP047492.1 Protein Homology CDS 4217254 4218765 . - 0 ID=cds-WP_011409378.1;Parent=gene-IXO1104_RS19730;Dbxref=Genbank:WP_011409378.1;Name=WP_011409378.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485287.1;locus_tag=IXO1104_RS19730;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011409378.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4218762 4220237 . - . ID=gene-IXO1104_RS19735;Name=IXO1104_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19735;old_locus_tag=IXO1104_19685 NZ_CP047492.1 Protein Homology CDS 4218762 4220237 . - 0 ID=cds-WP_080493528.1;Parent=gene-IXO1104_RS19735;Dbxref=Genbank:WP_080493528.1;Name=WP_080493528.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346420.1;locus_tag=IXO1104_RS19735;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080493528.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4220246 4222114 . - . ID=gene-IXO1104_RS19740;Name=IXO1104_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19740;old_locus_tag=IXO1104_19690 NZ_CP047492.1 Protein Homology CDS 4220246 4222114 . - 0 ID=cds-WP_011409379.1;Parent=gene-IXO1104_RS19740;Dbxref=Genbank:WP_011409379.1;Name=WP_011409379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381784.1;locus_tag=IXO1104_RS19740;product=penicillin-binding protein 2;protein_id=WP_011409379.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4222254 4222517 . - . ID=gene-IXO1104_RS19745;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=IXO1104_RS19745;old_locus_tag=IXO1104_19695 NZ_CP047492.1 Protein Homology CDS 4222254 4222517 . - 0 ID=cds-WP_011409380.1;Parent=gene-IXO1104_RS19745;Dbxref=Genbank:WP_011409380.1;Name=WP_011409380.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344441.1;locus_tag=IXO1104_RS19745;product=cell division protein FtsL;protein_id=WP_011409380.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4222514 4223557 . - . ID=gene-IXO1104_RS19750;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS19750;old_locus_tag=IXO1104_19700 NZ_CP047492.1 Protein Homology CDS 4222514 4223557 . - 0 ID=cds-WP_011409381.1;Parent=gene-IXO1104_RS19750;Dbxref=Genbank:WP_011409381.1;Name=WP_011409381.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299913.1;locus_tag=IXO1104_RS19750;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011409381.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4223573 4224028 . - . ID=gene-IXO1104_RS19755;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=IXO1104_RS19755;old_locus_tag=IXO1104_19705 NZ_CP047492.1 Protein Homology CDS 4223573 4224028 . - 0 ID=cds-WP_011260238.1;Parent=gene-IXO1104_RS19755;Dbxref=Genbank:WP_011260238.1;Name=WP_011260238.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367651.1;locus_tag=IXO1104_RS19755;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_011260238.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4224343 4225110 . + . ID=gene-IXO1104_RS19760;Name=IXO1104_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19760;old_locus_tag=IXO1104_19710 NZ_CP047492.1 Protein Homology CDS 4224343 4225110 . + 0 ID=cds-WP_012444183.1;Parent=gene-IXO1104_RS19760;Dbxref=Genbank:WP_012444183.1;Name=WP_012444183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485298.1;locus_tag=IXO1104_RS19760;product=NRDE family protein;protein_id=WP_012444183.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4225159 4225320 . + . ID=gene-IXO1104_RS19765;Name=IXO1104_RS19765;end_range=4225320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19765;old_locus_tag=IXO1104_19715;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4225159 4225320 . + 0 ID=cds-IXO1104_RS19765;Parent=gene-IXO1104_RS19765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4225320,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019009.2;locus_tag=IXO1104_RS19765;partial=true;product=type II toxin-antitoxin system CcdA family antitoxin;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4225491 4225840 . - . ID=gene-IXO1104_RS19770;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=IXO1104_RS19770;old_locus_tag=IXO1104_19720 NZ_CP047492.1 cmsearch RNase_P_RNA 4225491 4225840 . - . ID=rna-IXO1104_RS19770;Parent=gene-IXO1104_RS19770;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19770;product=RNase P RNA component class A NZ_CP047492.1 cmsearch exon 4225491 4225840 . - . ID=exon-IXO1104_RS19770-1;Parent=rna-IXO1104_RS19770;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS19770;product=RNase P RNA component class A NZ_CP047492.1 RefSeq gene 4225987 4226808 . - . ID=gene-IXO1104_RS19775;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=IXO1104_RS19775;old_locus_tag=IXO1104_19725 NZ_CP047492.1 Protein Homology CDS 4225987 4226808 . - 0 ID=cds-WP_011409385.1;Parent=gene-IXO1104_RS19775;Dbxref=Genbank:WP_011409385.1;Name=WP_011409385.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035951.1;locus_tag=IXO1104_RS19775;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011409385.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4226929 4228620 . + . ID=gene-IXO1104_RS19780;Name=IXO1104_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19780;old_locus_tag=IXO1104_19730 NZ_CP047492.1 Protein Homology CDS 4226929 4228620 . + 0 ID=cds-WP_027703224.1;Parent=gene-IXO1104_RS19780;Dbxref=Genbank:WP_027703224.1;Name=WP_027703224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160278.1;locus_tag=IXO1104_RS19780;product=penicillin-binding protein activator;protein_id=WP_027703224.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4228625 4228993 . + . ID=gene-IXO1104_RS19785;Name=IXO1104_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19785;old_locus_tag=IXO1104_19735 NZ_CP047492.1 Protein Homology CDS 4228625 4228993 . + 0 ID=cds-WP_011409386.1;Parent=gene-IXO1104_RS19785;Dbxref=Genbank:WP_011409386.1;Name=WP_011409386.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571510.1;locus_tag=IXO1104_RS19785;product=YraN family protein;protein_id=WP_011409386.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4229023 4229562 . + . ID=gene-IXO1104_RS19790;Name=IXO1104_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19790;old_locus_tag=IXO1104_19740 NZ_CP047492.1 Protein Homology CDS 4229023 4229562 . + 0 ID=cds-WP_011409387.1;Parent=gene-IXO1104_RS19790;Dbxref=Genbank:WP_011409387.1;Name=WP_011409387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910944.1;locus_tag=IXO1104_RS19790;product=metal-dependent hydrolase;protein_id=WP_011409387.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4229559 4230944 . + . ID=gene-IXO1104_RS19795;Name=IXO1104_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19795;old_locus_tag=IXO1104_19745 NZ_CP047492.1 Protein Homology CDS 4229559 4230944 . + 0 ID=cds-WP_012444181.1;Parent=gene-IXO1104_RS19795;Dbxref=Genbank:WP_012444181.1;Name=WP_012444181.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115489.1;locus_tag=IXO1104_RS19795;product=FAD-binding protein;protein_id=WP_012444181.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4230958 4231674 . - . ID=gene-IXO1104_RS19800;Name=IXO1104_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19800;old_locus_tag=IXO1104_19750 NZ_CP047492.1 Protein Homology CDS 4230958 4231674 . - 0 ID=cds-WP_075239946.1;Parent=gene-IXO1104_RS19800;Dbxref=Genbank:WP_075239946.1;Name=WP_075239946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158836.1;locus_tag=IXO1104_RS19800;product=response regulator transcription factor;protein_id=WP_075239946.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4231664 4234324 . - . ID=gene-IXO1104_RS19805;Name=IXO1104_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19805;old_locus_tag=IXO1104_19755 NZ_CP047492.1 Protein Homology CDS 4231664 4234324 . - 0 ID=cds-WP_011260247.1;Parent=gene-IXO1104_RS19805;Dbxref=Genbank:WP_011260247.1;Name=WP_011260247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849531.1;locus_tag=IXO1104_RS19805;product=sensor histidine kinase KdpD;protein_id=WP_011260247.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4234401 4235030 . - . ID=gene-IXO1104_RS19810;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=IXO1104_RS19810;old_locus_tag=IXO1104_19760 NZ_CP047492.1 Protein Homology CDS 4234401 4235030 . - 0 ID=cds-WP_011409390.1;Parent=gene-IXO1104_RS19810;Dbxref=Genbank:WP_011409390.1;Name=WP_011409390.1;Ontology_term=GO:0006813,GO:0008556,GO:0016021;gbkey=CDS;gene=kdpC;go_component=integral component of membrane|0016021||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490511.1;locus_tag=IXO1104_RS19810;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_011409390.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4235071 4237119 . - . ID=gene-IXO1104_RS19815;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS19815;old_locus_tag=IXO1104_19765 NZ_CP047492.1 Protein Homology CDS 4235071 4237119 . - 0 ID=cds-WP_011260249.1;Parent=gene-IXO1104_RS19815;Dbxref=Genbank:WP_011260249.1;Name=WP_011260249.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260249.1;locus_tag=IXO1104_RS19815;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_011260249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4237132 4238925 . - . ID=gene-IXO1104_RS19820;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19820;old_locus_tag=IXO1104_19770 NZ_CP047492.1 Protein Homology CDS 4237132 4238925 . - 0 ID=cds-WP_011260250.1;Parent=gene-IXO1104_RS19820;Dbxref=Genbank:WP_011260250.1;Name=WP_011260250.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490514.1;locus_tag=IXO1104_RS19820;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_011260250.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4238941 4239033 . - . ID=gene-IXO1104_RS19825;Name=IXO1104_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19825;old_locus_tag=IXO1104_19775 NZ_CP047492.1 Protein Homology CDS 4238941 4239033 . - 0 ID=cds-WP_006452907.1;Parent=gene-IXO1104_RS19825;Dbxref=Genbank:WP_006452907.1;Name=WP_006452907.1;Ontology_term=GO:0043462,GO:0008556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452907.1;locus_tag=IXO1104_RS19825;product=potassium-transporting ATPase subunit F;protein_id=WP_006452907.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4239483 4240523 . - . ID=gene-IXO1104_RS19830;Name=IXO1104_RS19830;end_range=4240523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19830;old_locus_tag=IXO1104_19780;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4239483 4240523 . - 0 ID=cds-IXO1104_RS19830;Parent=gene-IXO1104_RS19830;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4240523,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501974.1;locus_tag=IXO1104_RS19830;partial=true;product=F-box domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4240807 4241831 . - . ID=gene-IXO1104_RS19835;Name=IXO1104_RS19835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19835;old_locus_tag=IXO1104_19785;pseudo=true NZ_CP047492.1 Protein Homology CDS 4240807 4241831 . - 0 ID=cds-IXO1104_RS19835;Parent=gene-IXO1104_RS19835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501973.1;locus_tag=IXO1104_RS19835;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4242130 4243104 . - . ID=gene-IXO1104_RS19840;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=IXO1104_RS19840;old_locus_tag=IXO1104_19790 NZ_CP047492.1 Protein Homology CDS 4242130 4243104 . - 0 ID=cds-WP_011409393.1;Parent=gene-IXO1104_RS19840;Dbxref=Genbank:WP_011409393.1;Name=WP_011409393.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925283.1;locus_tag=IXO1104_RS19840;product=thiamine-phosphate kinase;protein_id=WP_011409393.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4243325 4243795 . - . ID=gene-IXO1104_RS19845;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=IXO1104_RS19845;old_locus_tag=IXO1104_19795 NZ_CP047492.1 Protein Homology CDS 4243325 4243795 . - 0 ID=cds-WP_011260254.1;Parent=gene-IXO1104_RS19845;Dbxref=Genbank:WP_011260254.1;Name=WP_011260254.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968663.1;locus_tag=IXO1104_RS19845;product=transcription antitermination factor NusB;protein_id=WP_011260254.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4243792 4244256 . - . ID=gene-IXO1104_RS19850;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=IXO1104_RS19850;old_locus_tag=IXO1104_19800 NZ_CP047492.1 Protein Homology CDS 4243792 4244256 . - 0 ID=cds-WP_011409394.1;Parent=gene-IXO1104_RS19850;Dbxref=Genbank:WP_011409394.1;Name=WP_011409394.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409394.1;locus_tag=IXO1104_RS19850;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_011409394.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4244570 4245709 . - . ID=gene-IXO1104_RS19855;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=IXO1104_RS19855;old_locus_tag=IXO1104_19805 NZ_CP047492.1 Protein Homology CDS 4244570 4245709 . - 0 ID=cds-WP_012444173.1;Parent=gene-IXO1104_RS19855;Dbxref=Genbank:WP_012444173.1;Name=WP_012444173.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444173.1;locus_tag=IXO1104_RS19855;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_012444173.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4245706 4246308 . - . ID=gene-IXO1104_RS19860;Name=IXO1104_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19860;old_locus_tag=IXO1104_19810 NZ_CP047492.1 Protein Homology CDS 4245706 4246308 . - 0 ID=cds-WP_011260257.1;Parent=gene-IXO1104_RS19860;Dbxref=Genbank:WP_011260257.1;Name=WP_011260257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576782.1;locus_tag=IXO1104_RS19860;product=riboflavin synthase;protein_id=WP_011260257.1;transl_table=11 NZ_CP047492.1 cmsearch riboswitch 4246476 4246651 . - . ID=id-NZ_CP047492.1:4246476..4246651;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP047492.1 RefSeq gene 4246869 4247492 . + . ID=gene-IXO1104_RS19865;Name=IXO1104_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19865;old_locus_tag=IXO1104_19815 NZ_CP047492.1 Protein Homology CDS 4246869 4247492 . + 0 ID=cds-WP_011260258.1;Parent=gene-IXO1104_RS19865;Dbxref=Genbank:WP_011260258.1;Name=WP_011260258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035933.1;locus_tag=IXO1104_RS19865;product=hypothetical protein;protein_id=WP_011260258.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4247548 4248657 . - . ID=gene-IXO1104_RS19870;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=IXO1104_RS19870;old_locus_tag=IXO1104_19820 NZ_CP047492.1 Protein Homology CDS 4247548 4248657 . - 0 ID=cds-WP_011260259.1;Parent=gene-IXO1104_RS19870;Dbxref=Genbank:WP_011260259.1;Name=WP_011260259.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501964.1;locus_tag=IXO1104_RS19870;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_011260259.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4248654 4249139 . - . ID=gene-IXO1104_RS19875;Name=IXO1104_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19875;old_locus_tag=IXO1104_19825 NZ_CP047492.1 Protein Homology CDS 4248654 4249139 . - 0 ID=cds-WP_075240462.1;Parent=gene-IXO1104_RS19875;Dbxref=Genbank:WP_075240462.1;Name=WP_075240462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112785.1;locus_tag=IXO1104_RS19875;product=GNAT family N-acetyltransferase;protein_id=WP_075240462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4249136 4249660 . - . ID=gene-IXO1104_RS19880;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=IXO1104_RS19880;old_locus_tag=IXO1104_19830 NZ_CP047492.1 Protein Homology CDS 4249136 4249660 . - 0 ID=cds-WP_011260261.1;Parent=gene-IXO1104_RS19880;Dbxref=Genbank:WP_011260261.1;Name=WP_011260261.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453216.1;locus_tag=IXO1104_RS19880;product=transcriptional regulator NrdR;protein_id=WP_011260261.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4249660 4250175 . - . ID=gene-IXO1104_RS19885;Name=IXO1104_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19885;old_locus_tag=IXO1104_19835 NZ_CP047492.1 Protein Homology CDS 4249660 4250175 . - 0 ID=cds-WP_011409395.1;Parent=gene-IXO1104_RS19885;Dbxref=Genbank:WP_011409395.1;Name=WP_011409395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501960.1;locus_tag=IXO1104_RS19885;product=hypothetical protein;protein_id=WP_011409395.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4250189 4251442 . - . ID=gene-IXO1104_RS19890;Name=IXO1104_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19890;old_locus_tag=IXO1104_19840 NZ_CP047492.1 Protein Homology CDS 4250189 4251442 . - 0 ID=cds-WP_011260263.1;Parent=gene-IXO1104_RS19890;Dbxref=Genbank:WP_011260263.1;Name=WP_011260263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260263.1;locus_tag=IXO1104_RS19890;product=serine hydroxymethyltransferase;protein_id=WP_011260263.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4251628 4253997 . - . ID=gene-IXO1104_RS19895;Name=IXO1104_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19895;old_locus_tag=IXO1104_19845 NZ_CP047492.1 Protein Homology CDS 4251628 4253997 . - 0 ID=cds-WP_075240463.1;Parent=gene-IXO1104_RS19895;Dbxref=Genbank:WP_075240463.1;Name=WP_075240463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117272.1;locus_tag=IXO1104_RS19895;product=TonB-dependent receptor;protein_id=WP_075240463.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4254326 4254544 . + . ID=gene-IXO1104_RS19900;Name=IXO1104_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19900;old_locus_tag=IXO1104_19850 NZ_CP047492.1 GeneMarkS-2+ CDS 4254326 4254544 . + 0 ID=cds-WP_230455213.1;Parent=gene-IXO1104_RS19900;Dbxref=Genbank:WP_230455213.1;Name=WP_230455213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS19900;product=hypothetical protein;protein_id=WP_230455213.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4254669 4255190 . - . ID=gene-IXO1104_RS19905;Name=IXO1104_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19905;old_locus_tag=IXO1104_19855 NZ_CP047492.1 Protein Homology CDS 4254669 4255190 . - 0 ID=cds-WP_075240464.1;Parent=gene-IXO1104_RS19905;Dbxref=Genbank:WP_075240464.1;Name=WP_075240464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156712.1;locus_tag=IXO1104_RS19905;product=RcnB family protein;protein_id=WP_075240464.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4255417 4257078 . + . ID=gene-IXO1104_RS19910;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19910;old_locus_tag=IXO1104_19860 NZ_CP047492.1 Protein Homology CDS 4255417 4257078 . + 0 ID=cds-WP_010367724.1;Parent=gene-IXO1104_RS19910;Dbxref=Genbank:WP_010367724.1;Name=WP_010367724.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346396.1;locus_tag=IXO1104_RS19910;product=energy-dependent translational throttle protein EttA;protein_id=WP_010367724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4257259 4257597 . + . ID=gene-IXO1104_RS19915;Name=IXO1104_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19915;old_locus_tag=IXO1104_19865 NZ_CP047492.1 Protein Homology CDS 4257259 4257597 . + 0 ID=cds-WP_019299887.1;Parent=gene-IXO1104_RS19915;Dbxref=Genbank:WP_019299887.1;Name=WP_019299887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299887.1;locus_tag=IXO1104_RS19915;product=hypothetical protein;protein_id=WP_019299887.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4257594 4257926 . - . ID=gene-IXO1104_RS19920;Name=IXO1104_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19920;old_locus_tag=IXO1104_19870 NZ_CP047492.1 Protein Homology CDS 4257594 4257926 . - 0 ID=cds-WP_011409398.1;Parent=gene-IXO1104_RS19920;Dbxref=Genbank:WP_011409398.1;Name=WP_011409398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409398.1;locus_tag=IXO1104_RS19920;product=DUF4386 domain-containing protein;protein_id=WP_011409398.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4258084 4258311 . - . ID=gene-IXO1104_RS19925;Name=IXO1104_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19925;old_locus_tag=IXO1104_19875 NZ_CP047492.1 Protein Homology CDS 4258084 4258311 . - 0 ID=cds-WP_012444166.1;Parent=gene-IXO1104_RS19925;Dbxref=Genbank:WP_012444166.1;Name=WP_012444166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501951.1;locus_tag=IXO1104_RS19925;product=DUF4386 family protein;protein_id=WP_012444166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4258441 4259271 . - . ID=gene-IXO1104_RS19930;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=IXO1104_RS19930;old_locus_tag=IXO1104_19880 NZ_CP047492.1 Protein Homology CDS 4258441 4259271 . - 0 ID=cds-WP_011260269.1;Parent=gene-IXO1104_RS19930;Dbxref=Genbank:WP_011260269.1;Name=WP_011260269.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902627.1;locus_tag=IXO1104_RS19930;product=S-formylglutathione hydrolase;protein_id=WP_011260269.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4259281 4259904 . - . ID=gene-IXO1104_RS19935;Name=gfa;gbkey=Gene;gene=gfa;gene_biotype=protein_coding;locus_tag=IXO1104_RS19935;old_locus_tag=IXO1104_19885 NZ_CP047492.1 Protein Homology CDS 4259281 4259904 . - 0 ID=cds-WP_229002692.1;Parent=gene-IXO1104_RS19935;Dbxref=Genbank:WP_229002692.1;Name=WP_229002692.1;Ontology_term=GO:0046292,GO:0051907;gbkey=CDS;gene=gfa;go_function=S-(hydroxymethyl)glutathione synthase activity|0051907||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: protein motif:HMM:NF003829.0;locus_tag=IXO1104_RS19935;product=S-(hydroxymethyl)glutathione synthase;protein_id=WP_229002692.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4259973 4261082 . - . ID=gene-IXO1104_RS19940;Name=IXO1104_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19940;old_locus_tag=IXO1104_19890 NZ_CP047492.1 Protein Homology CDS 4259973 4261082 . - 0 ID=cds-WP_011409400.1;Parent=gene-IXO1104_RS19940;Dbxref=Genbank:WP_011409400.1;Name=WP_011409400.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477647.1;locus_tag=IXO1104_RS19940;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_011409400.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4261147 4261422 . - . ID=gene-IXO1104_RS19945;Name=IXO1104_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19945;old_locus_tag=IXO1104_19895 NZ_CP047492.1 Protein Homology CDS 4261147 4261422 . - 0 ID=cds-WP_011260271.1;Parent=gene-IXO1104_RS19945;Dbxref=Genbank:WP_011260271.1;Name=WP_011260271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384071.1;locus_tag=IXO1104_RS19945;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011260271.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4261752 4262114 . - . ID=gene-IXO1104_RS19950;Name=IXO1104_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19950 NZ_CP047492.1 Protein Homology CDS 4261752 4262114 . - 0 ID=cds-WP_027703215.1;Parent=gene-IXO1104_RS19950;Dbxref=Genbank:WP_027703215.1;Name=WP_027703215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462864.1;locus_tag=IXO1104_RS19950;product=hypothetical protein;protein_id=WP_027703215.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4262544 4263644 . - . ID=gene-IXO1104_RS19955;Name=IXO1104_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19955;old_locus_tag=IXO1104_19900 NZ_CP047492.1 Protein Homology CDS 4262544 4263644 . - 0 ID=cds-WP_011260272.1;Parent=gene-IXO1104_RS19955;Dbxref=Genbank:WP_011260272.1;Name=WP_011260272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112264.1;locus_tag=IXO1104_RS19955;product=glycosyltransferase;protein_id=WP_011260272.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4263723 4264502 . + . ID=gene-IXO1104_RS19960;Name=IXO1104_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19960;old_locus_tag=IXO1104_19905 NZ_CP047492.1 Protein Homology CDS 4263723 4264502 . + 0 ID=cds-WP_027703214.1;Parent=gene-IXO1104_RS19960;Dbxref=Genbank:WP_027703214.1;Name=WP_027703214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902620.1;locus_tag=IXO1104_RS19960;product=response regulator transcription factor;protein_id=WP_027703214.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4264499 4265998 . + . ID=gene-IXO1104_RS19965;Name=IXO1104_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19965;old_locus_tag=IXO1104_19910 NZ_CP047492.1 Protein Homology CDS 4264499 4265998 . + 0 ID=cds-WP_012444157.1;Parent=gene-IXO1104_RS19965;Dbxref=Genbank:WP_012444157.1;Name=WP_012444157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365576.1;locus_tag=IXO1104_RS19965;product=HAMP domain-containing histidine kinase;protein_id=WP_012444157.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4266031 4266957 . - . ID=gene-IXO1104_RS19970;Name=IXO1104_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19970;old_locus_tag=IXO1104_19915 NZ_CP047492.1 Protein Homology CDS 4266031 4266957 . - 0 ID=cds-WP_024712625.1;Parent=gene-IXO1104_RS19970;Dbxref=Genbank:WP_024712625.1;Name=WP_024712625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118219.1;locus_tag=IXO1104_RS19970;product=hypothetical protein;protein_id=WP_024712625.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4266957 4267523 . - . ID=gene-IXO1104_RS19975;Name=IXO1104_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19975;old_locus_tag=IXO1104_19920 NZ_CP047492.1 Protein Homology CDS 4266957 4267523 . - 0 ID=cds-WP_011409406.1;Parent=gene-IXO1104_RS19975;Dbxref=Genbank:WP_011409406.1;Name=WP_011409406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009606591.1;locus_tag=IXO1104_RS19975;product=hypothetical protein;protein_id=WP_011409406.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4267925 4268410 . + . ID=gene-IXO1104_RS19980;Name=IXO1104_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19980;old_locus_tag=IXO1104_19925 NZ_CP047492.1 Protein Homology CDS 4267925 4268410 . + 0 ID=cds-WP_011409407.1;Parent=gene-IXO1104_RS19980;Dbxref=Genbank:WP_011409407.1;Name=WP_011409407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377824.1;locus_tag=IXO1104_RS19980;product=hypothetical protein;protein_id=WP_011409407.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4268473 4269240 . - . ID=gene-IXO1104_RS19985;Name=IXO1104_RS19985;end_range=4269240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19985;old_locus_tag=IXO1104_19930;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4268473 4269240 . - 0 ID=cds-IXO1104_RS19985;Parent=gene-IXO1104_RS19985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042398,GO:0004357;end_range=4269240,.;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=IXO1104_RS19985;partial=true;product=glutamate-cysteine ligase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4269326 4270645 . - . ID=gene-IXO1104_RS19990;Name=IXO1104_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS19990;old_locus_tag=IXO1104_19935 NZ_CP047492.1 Protein Homology CDS 4269326 4270645 . - 0 ID=cds-WP_117328809.1;Parent=gene-IXO1104_RS19990;Dbxref=Genbank:WP_117328809.1;Name=WP_117328809.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS19990;product=IS701 family transposase;protein_id=WP_117328809.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4270718 4271137 . - . ID=gene-IXO1104_RS19995;Name=IXO1104_RS19995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS19995;partial=true;pseudo=true;start_range=.,4270718 NZ_CP047492.1 Protein Homology CDS 4270718 4271137 . - 0 ID=cds-IXO1104_RS19995;Parent=gene-IXO1104_RS19995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014162019.1;locus_tag=IXO1104_RS19995;partial=true;product=glutamate-cysteine ligase family protein;pseudo=true;start_range=.,4270718;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4271104 4272001 . + . ID=gene-IXO1104_RS20000;Name=IXO1104_RS20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20000;old_locus_tag=IXO1104_19945;partial=true;pseudo=true;start_range=.,4271104 NZ_CP047492.1 Protein Homology CDS 4271104 4272001 . + 0 ID=cds-IXO1104_RS20000;Parent=gene-IXO1104_RS20000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576761.1;locus_tag=IXO1104_RS20000;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,4271104;transl_table=11 NZ_CP047492.1 RefSeq gene 4272188 4273552 . - . ID=gene-IXO1104_RS20005;Name=IXO1104_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20005;old_locus_tag=IXO1104_19950 NZ_CP047492.1 Protein Homology CDS 4272188 4273552 . - 0 ID=cds-WP_012444151.1;Parent=gene-IXO1104_RS20005;Dbxref=Genbank:WP_012444151.1;Name=WP_012444151.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=IXO1104_RS20005;product=glutamate--cysteine ligase;protein_id=WP_012444151.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4273768 4274463 . + . ID=gene-IXO1104_RS20010;Name=IXO1104_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20010;old_locus_tag=IXO1104_19955 NZ_CP047492.1 Protein Homology CDS 4273768 4274463 . + 0 ID=cds-WP_012444150.1;Parent=gene-IXO1104_RS20010;Dbxref=Genbank:WP_012444150.1;Name=WP_012444150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171583.1;locus_tag=IXO1104_RS20010;product=VIT family protein;protein_id=WP_012444150.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4274558 4275181 . - . ID=gene-IXO1104_RS20015;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20015;old_locus_tag=IXO1104_19960 NZ_CP047492.1 Protein Homology CDS 4274558 4275181 . - 0 ID=cds-WP_024712536.1;Parent=gene-IXO1104_RS20015;Dbxref=Genbank:WP_024712536.1;Name=WP_024712536.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156699.1;locus_tag=IXO1104_RS20015;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_024712536.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4275326 4276123 . + . ID=gene-IXO1104_RS20020;Name=IXO1104_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20020;old_locus_tag=IXO1104_19965 NZ_CP047492.1 Protein Homology CDS 4275326 4276123 . + 0 ID=cds-WP_048483028.1;Parent=gene-IXO1104_RS20020;Dbxref=Genbank:WP_048483028.1;Name=WP_048483028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911041.1;locus_tag=IXO1104_RS20020;product=cytochrome c4;protein_id=WP_048483028.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4276217 4276867 . + . ID=gene-IXO1104_RS20025;Name=IXO1104_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20025;old_locus_tag=IXO1104_19970 NZ_CP047492.1 Protein Homology CDS 4276217 4276867 . + 0 ID=cds-WP_048484705.1;Parent=gene-IXO1104_RS20025;Dbxref=Genbank:WP_048484705.1;Name=WP_048484705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482610.1;locus_tag=IXO1104_RS20025;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_048484705.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4276959 4277774 . + . ID=gene-IXO1104_RS20030;Name=IXO1104_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20030;old_locus_tag=IXO1104_19975 NZ_CP047492.1 Protein Homology CDS 4276959 4277774 . + 0 ID=cds-WP_011260284.1;Parent=gene-IXO1104_RS20030;Dbxref=Genbank:WP_011260284.1;Name=WP_011260284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089366.1;locus_tag=IXO1104_RS20030;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_011260284.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4277824 4278561 . + . ID=gene-IXO1104_RS20035;Name=IXO1104_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20035;old_locus_tag=IXO1104_19980 NZ_CP047492.1 Protein Homology CDS 4277824 4278561 . + 0 ID=cds-WP_011409416.1;Parent=gene-IXO1104_RS20035;Dbxref=Genbank:WP_011409416.1;Name=WP_011409416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409416.1;locus_tag=IXO1104_RS20035;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_011409416.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4278660 4279616 . + . ID=gene-IXO1104_RS20040;Name=IXO1104_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20040;old_locus_tag=IXO1104_19985 NZ_CP047492.1 Protein Homology CDS 4278660 4279616 . + 0 ID=cds-WP_041182719.1-4;Parent=gene-IXO1104_RS20040;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS20040;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4279613 4280080 . + . ID=gene-IXO1104_RS20045;Name=IXO1104_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20045;old_locus_tag=IXO1104_19990 NZ_CP047492.1 GeneMarkS-2+ CDS 4279613 4280080 . + 0 ID=cds-WP_075245035.1;Parent=gene-IXO1104_RS20045;Dbxref=Genbank:WP_075245035.1;Name=WP_075245035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS20045;product=hypothetical protein;protein_id=WP_075245035.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4280176 4280507 . + . ID=gene-IXO1104_RS20050;Name=IXO1104_RS20050;end_range=4280507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20050;old_locus_tag=IXO1104_19995;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4280176 4280507 . + 0 ID=cds-IXO1104_RS20050;Parent=gene-IXO1104_RS20050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4280507,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=IXO1104_RS20050;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4280620 4281366 . + . ID=gene-IXO1104_RS20055;Name=IXO1104_RS20055;end_range=4281366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20055;old_locus_tag=IXO1104_20000;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4280620 4281366 . + 0 ID=cds-IXO1104_RS20055;Parent=gene-IXO1104_RS20055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4281366,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS20055;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4281374 4282172 . - . ID=gene-IXO1104_RS20060;Name=IXO1104_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20060;old_locus_tag=IXO1104_20005 NZ_CP047492.1 Protein Homology CDS 4281901 4282172 . - 0 ID=cds-WP_094187763.1-8;Parent=gene-IXO1104_RS20060;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20060;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4281374 4281902 . - 1 ID=cds-WP_094187763.1-8;Parent=gene-IXO1104_RS20060;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20060;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4282226 4283024 . - . ID=gene-IXO1104_RS20065;Name=IXO1104_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20065;old_locus_tag=IXO1104_20010 NZ_CP047492.1 Protein Homology CDS 4282753 4283024 . - 0 ID=cds-WP_094187777.1-2;Parent=gene-IXO1104_RS20065;Dbxref=Genbank:WP_094187777.1;Name=WP_094187777.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20065;product=IS5 family transposase;protein_id=WP_094187777.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4282226 4282754 . - 1 ID=cds-WP_094187777.1-2;Parent=gene-IXO1104_RS20065;Dbxref=Genbank:WP_094187777.1;Name=WP_094187777.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20065;product=IS5 family transposase;protein_id=WP_094187777.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4283068 4283643 . + . ID=gene-IXO1104_RS20070;Name=IXO1104_RS20070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20070;old_locus_tag=IXO1104_20015;partial=true;pseudo=true;start_range=.,4283068 NZ_CP047492.1 Protein Homology CDS 4283068 4283643 . + 0 ID=cds-IXO1104_RS20070;Parent=gene-IXO1104_RS20070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS20070;partial=true;product=transposase;pseudo=true;start_range=.,4283068;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4283846 4284538 . + . ID=gene-IXO1104_RS20075;Name=IXO1104_RS20075;end_range=4284538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20075;old_locus_tag=IXO1104_20020;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4283846 4284538 . + 0 ID=cds-IXO1104_RS20075;Parent=gene-IXO1104_RS20075;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4284538,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS20075;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4284671 4285903 . + . ID=gene-IXO1104_RS20080;Name=IXO1104_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20080;old_locus_tag=IXO1104_20025 NZ_CP047492.1 Protein Homology CDS 4284671 4285903 . + 0 ID=cds-WP_011260292.1;Parent=gene-IXO1104_RS20080;Dbxref=Genbank:WP_011260292.1;Name=WP_011260292.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159082.1;locus_tag=IXO1104_RS20080;product=multifunctional CCA addition/repair protein;protein_id=WP_011260292.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4285943 4286728 . - . ID=gene-IXO1104_RS20085;Name=IXO1104_RS20085;end_range=4286728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20085;old_locus_tag=IXO1104_20030;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4285943 4286728 . - 0 ID=cds-IXO1104_RS20085;Parent=gene-IXO1104_RS20085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4286728,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1104_RS20085;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4286736 4287164 . - . ID=gene-IXO1104_RS20090;Name=IXO1104_RS20090;end_range=4287164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20090;old_locus_tag=IXO1104_20035;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4286736 4287164 . - 0 ID=cds-IXO1104_RS20090;Parent=gene-IXO1104_RS20090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4287164,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS20090;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4287169 4288125 . - . ID=gene-IXO1104_RS20095;Name=IXO1104_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20095;old_locus_tag=IXO1104_20040 NZ_CP047492.1 Protein Homology CDS 4287169 4288125 . - 0 ID=cds-WP_041182545.1-11;Parent=gene-IXO1104_RS20095;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS20095;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4288235 4288558 . - . ID=gene-IXO1104_RS20100;Name=IXO1104_RS20100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20100;old_locus_tag=IXO1104_20045;partial=true;pseudo=true;start_range=.,4288235 NZ_CP047492.1 Protein Homology CDS 4288235 4288558 . - 0 ID=cds-IXO1104_RS20100;Parent=gene-IXO1104_RS20100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS20100;partial=true;product=transposase;pseudo=true;start_range=.,4288235;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4288616 4288780 . - . ID=gene-IXO1104_RS20105;Name=IXO1104_RS20105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20105;old_locus_tag=IXO1104_20050;partial=true;pseudo=true;start_range=.,4288616 NZ_CP047492.1 Protein Homology CDS 4288616 4288780 . - 0 ID=cds-IXO1104_RS20105;Parent=gene-IXO1104_RS20105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS20105;partial=true;product=transposase;pseudo=true;start_range=.,4288616;transl_table=11 NZ_CP047492.1 RefSeq gene 4289009 4289084 . - . ID=gene-IXO1104_RS20110;Name=IXO1104_RS20110;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20110;old_locus_tag=IXO1104_20055 NZ_CP047492.1 cmsearch ncRNA 4289009 4289084 . - . ID=rna-IXO1104_RS20110;Parent=gene-IXO1104_RS20110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20110;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4289009 4289084 . - . ID=exon-IXO1104_RS20110-1;Parent=rna-IXO1104_RS20110;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20110;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 4289188 4289508 . - . ID=gene-IXO1104_RS20115;Name=IXO1104_RS20115;end_range=4289508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20115;old_locus_tag=IXO1104_20060;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4289188 4289508 . - 0 ID=cds-IXO1104_RS20115;Parent=gene-IXO1104_RS20115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4289508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089361.1;locus_tag=IXO1104_RS20115;partial=true;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4289683 4291931 . - . ID=gene-IXO1104_RS20120;Name=IXO1104_RS20120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20120;old_locus_tag=IXO1104_20065;partial=true;pseudo=true;start_range=.,4289683 NZ_CP047492.1 Protein Homology CDS 4289683 4291931 . - 0 ID=cds-IXO1104_RS20120;Parent=gene-IXO1104_RS20120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508960.1;locus_tag=IXO1104_RS20120;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,4289683;transl_table=11 NZ_CP047492.1 RefSeq gene 4292567 4293532 . + . ID=gene-IXO1104_RS20125;Name=IXO1104_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20125;old_locus_tag=IXO1104_20070 NZ_CP047492.1 Protein Homology CDS 4292567 4293532 . + 0 ID=cds-WP_109182013.1-2;Parent=gene-IXO1104_RS20125;Dbxref=Genbank:WP_109182013.1;Name=WP_109182013.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS20125;product=IS1595 family transposase;protein_id=WP_109182013.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4293994 4294224 . - . ID=gene-IXO1104_RS20130;Name=IXO1104_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20130;old_locus_tag=IXO1104_20075 NZ_CP047492.1 Protein Homology CDS 4293994 4294224 . - 0 ID=cds-WP_012444134.1;Parent=gene-IXO1104_RS20130;Dbxref=Genbank:WP_012444134.1;Name=WP_012444134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301884.1;locus_tag=IXO1104_RS20130;product=hypothetical protein;protein_id=WP_012444134.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4294850 4296892 . + . ID=gene-IXO1104_RS20135;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20135;old_locus_tag=IXO1104_20080 NZ_CP047492.1 Protein Homology CDS 4294850 4296892 . + 0 ID=cds-WP_011409428.1;Parent=gene-IXO1104_RS20135;Dbxref=Genbank:WP_011409428.1;Name=WP_011409428.1;Ontology_term=GO:0015774,GO:0042710,GO:0005215,GO:0045203;gbkey=CDS;gene=pgaA;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transporter activity|0005215||IEA;go_process=polysaccharide transport|0015774||IEA,biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444133.1;locus_tag=IXO1104_RS20135;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_011409428.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4296894 4298792 . + . ID=gene-IXO1104_RS20140;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=IXO1104_RS20140;old_locus_tag=IXO1104_20085 NZ_CP047492.1 Protein Homology CDS 4296894 4298792 . + 0 ID=cds-WP_011409429.1;Parent=gene-IXO1104_RS20140;Dbxref=Genbank:WP_011409429.1;Name=WP_011409429.1;Ontology_term=GO:0045226,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301885.1;locus_tag=IXO1104_RS20140;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_011409429.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4298794 4300047 . + . ID=gene-IXO1104_RS20145;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=IXO1104_RS20145;old_locus_tag=IXO1104_20090 NZ_CP047492.1 Protein Homology CDS 4298794 4300047 . + 0 ID=cds-WP_011260297.1;Parent=gene-IXO1104_RS20145;Dbxref=Genbank:WP_011260297.1;Name=WP_011260297.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304732.1;locus_tag=IXO1104_RS20145;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_011260297.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4300044 4300649 . + . ID=gene-IXO1104_RS20150;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS20150;old_locus_tag=IXO1104_20095 NZ_CP047492.1 Protein Homology CDS 4300044 4300649 . + 0 ID=cds-WP_012444131.1;Parent=gene-IXO1104_RS20150;Dbxref=Genbank:WP_012444131.1;Name=WP_012444131.1;Ontology_term=GO:0000271,GO:0042710,GO:0008375,GO:0016021;gbkey=CDS;gene=pgaD;go_component=integral component of membrane|0016021||IEA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501922.1;locus_tag=IXO1104_RS20150;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_012444131.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4301069 4302223 . - . ID=gene-IXO1104_RS20155;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20155;old_locus_tag=IXO1104_20100 NZ_CP047492.1 Protein Homology CDS 4301069 4302223 . - 0 ID=cds-WP_011409430.1;Parent=gene-IXO1104_RS20155;Dbxref=Genbank:WP_011409430.1;Name=WP_011409430.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974066.1;locus_tag=IXO1104_RS20155;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_011409430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4302226 4303254 . - . ID=gene-IXO1104_RS20160;Name=IXO1104_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20160;old_locus_tag=IXO1104_20105 NZ_CP047492.1 Protein Homology CDS 4302226 4303254 . - 0 ID=cds-WP_011260300.1;Parent=gene-IXO1104_RS20160;Dbxref=Genbank:WP_011260300.1;Name=WP_011260300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995982.1;locus_tag=IXO1104_RS20160;product=SIS domain-containing protein;protein_id=WP_011260300.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4303261 4304328 . - . ID=gene-IXO1104_RS20165;Name=IXO1104_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20165;old_locus_tag=IXO1104_20110 NZ_CP047492.1 Protein Homology CDS 4303261 4304328 . - 0 ID=cds-WP_012444129.1;Parent=gene-IXO1104_RS20165;Dbxref=Genbank:WP_012444129.1;Name=WP_012444129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301891.1;locus_tag=IXO1104_RS20165;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_012444129.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4304369 4305646 . - . ID=gene-IXO1104_RS20170;Name=IXO1104_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20170;old_locus_tag=IXO1104_20115 NZ_CP047492.1 Protein Homology CDS 4304369 4305646 . - 0 ID=cds-WP_027703724.1;Parent=gene-IXO1104_RS20170;Dbxref=Genbank:WP_027703724.1;Name=WP_027703724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911064.1;locus_tag=IXO1104_RS20170;product=sugar MFS transporter;protein_id=WP_027703724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4305691 4306413 . - . ID=gene-IXO1104_RS20175;Name=IXO1104_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20175;old_locus_tag=IXO1104_20120 NZ_CP047492.1 Protein Homology CDS 4305691 4306413 . - 0 ID=cds-WP_012444126.1;Parent=gene-IXO1104_RS20175;Dbxref=Genbank:WP_012444126.1;Name=WP_012444126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156688.1;locus_tag=IXO1104_RS20175;product=GntR family transcriptional regulator;protein_id=WP_012444126.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4306673 4307839 . - . ID=gene-IXO1104_RS20180;Name=IXO1104_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20180;old_locus_tag=IXO1104_20125 NZ_CP047492.1 Protein Homology CDS 4306673 4307839 . - 0 ID=cds-WP_011409433.1;Parent=gene-IXO1104_RS20180;Dbxref=Genbank:WP_011409433.1;Name=WP_011409433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911069.1;locus_tag=IXO1104_RS20180;product=heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein;protein_id=WP_011409433.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4307985 4310398 . - . ID=gene-IXO1104_RS20185;Name=IXO1104_RS20185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20185;old_locus_tag=IXO1104_20130;pseudo=true NZ_CP047492.1 Protein Homology CDS 4307985 4310398 . - 0 ID=cds-IXO1104_RS20185;Parent=gene-IXO1104_RS20185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368195.1;locus_tag=IXO1104_RS20185;product=alpha-N-acetylglucosaminidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4310395 4313292 . - . ID=gene-IXO1104_RS20190;Name=IXO1104_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20190;old_locus_tag=IXO1104_20135 NZ_CP047492.1 Protein Homology CDS 4310395 4313292 . - 0 ID=cds-WP_011260306.1;Parent=gene-IXO1104_RS20190;Dbxref=Genbank:WP_011260306.1;Name=WP_011260306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451298.1;locus_tag=IXO1104_RS20190;product=DUF4982 domain-containing protein;protein_id=WP_011260306.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4313443 4316133 . - . ID=gene-IXO1104_RS20195;Name=IXO1104_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20195;old_locus_tag=IXO1104_20140 NZ_CP047492.1 Protein Homology CDS 4313443 4316133 . - 0 ID=cds-WP_011260307.1;Parent=gene-IXO1104_RS20195;Dbxref=Genbank:WP_011260307.1;Name=WP_011260307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050492.1;locus_tag=IXO1104_RS20195;product=TonB-dependent receptor;protein_id=WP_011260307.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4316415 4316525 . - . ID=gene-IXO1104_RS20200;Name=IXO1104_RS20200;end_range=4316525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20200;old_locus_tag=IXO1104_20145;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4316415 4316525 . - 0 ID=cds-IXO1104_RS20200;Parent=gene-IXO1104_RS20200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4316525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS20200;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4316577 4316843 . + . ID=gene-IXO1104_RS20205;Name=IXO1104_RS20205;end_range=4316843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20205;old_locus_tag=IXO1104_20150;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4316577 4316843 . + 0 ID=cds-IXO1104_RS20205;Parent=gene-IXO1104_RS20205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4316843,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=IXO1104_RS20205;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4316865 4318100 . - . ID=gene-IXO1104_RS20210;Name=IXO1104_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20210;old_locus_tag=IXO1104_20155 NZ_CP047492.1 Protein Homology CDS 4316865 4318100 . - 0 ID=cds-WP_069965030.1;Parent=gene-IXO1104_RS20210;Dbxref=Genbank:WP_069965030.1;Name=WP_069965030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS20210;product=ISL3 family transposase;protein_id=WP_069965030.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4318166 4319011 . + . ID=gene-IXO1104_RS20215;Name=IXO1104_RS20215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20215;old_locus_tag=IXO1104_20160;partial=true;pseudo=true;start_range=.,4318166 NZ_CP047492.1 Protein Homology CDS 4318166 4319011 . + 0 ID=cds-IXO1104_RS20215;Parent=gene-IXO1104_RS20215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=IXO1104_RS20215;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4318166;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4319043 4319320 . + . ID=gene-IXO1104_RS20220;Name=IXO1104_RS20220;end_range=4319320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20220;old_locus_tag=IXO1104_20165;partial=true;pseudo=true;start_range=.,4319043 NZ_CP047492.1 Protein Homology CDS 4319043 4319320 . + 0 ID=cds-IXO1104_RS20220;Parent=gene-IXO1104_RS20220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=4319320,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612027.1;locus_tag=IXO1104_RS20220;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4319043;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4319360 4319548 . - . ID=gene-IXO1104_RS20225;Name=IXO1104_RS20225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20225;old_locus_tag=IXO1104_20170;partial=true;pseudo=true;start_range=.,4319360 NZ_CP047492.1 Protein Homology CDS 4319360 4319548 . - 0 ID=cds-IXO1104_RS20225;Parent=gene-IXO1104_RS20225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968563.1;locus_tag=IXO1104_RS20225;partial=true;product=VanZ family protein;pseudo=true;start_range=.,4319360;transl_table=11 NZ_CP047492.1 RefSeq gene 4319536 4320789 . - . ID=gene-IXO1104_RS20230;Name=IXO1104_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20230;old_locus_tag=IXO1104_20175 NZ_CP047492.1 Protein Homology CDS 4319536 4320789 . - 0 ID=cds-WP_011409441.1;Parent=gene-IXO1104_RS20230;Dbxref=Genbank:WP_011409441.1;Name=WP_011409441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237264.1;locus_tag=IXO1104_RS20230;product=class I SAM-dependent methyltransferase;protein_id=WP_011409441.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4320788 4321525 . + . ID=gene-IXO1104_RS20235;Name=IXO1104_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20235;old_locus_tag=IXO1104_20180 NZ_CP047492.1 Protein Homology CDS 4320788 4321525 . + 0 ID=cds-WP_011260312.1;Parent=gene-IXO1104_RS20235;Dbxref=Genbank:WP_011260312.1;Name=WP_011260312.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303260.1;locus_tag=IXO1104_RS20235;product=pteridine reductase;protein_id=WP_011260312.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4321694 4322209 . - . ID=gene-IXO1104_RS20240;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=IXO1104_RS20240;old_locus_tag=IXO1104_20185 NZ_CP047492.1 Protein Homology CDS 4321694 4322209 . - 0 ID=cds-WP_011260313.1;Parent=gene-IXO1104_RS20240;Dbxref=Genbank:WP_011260313.1;Name=WP_011260313.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482682.1;locus_tag=IXO1104_RS20240;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_011260313.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4322301 4323803 . - . ID=gene-IXO1104_RS20245;Name=IXO1104_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20245;old_locus_tag=IXO1104_20190 NZ_CP047492.1 Protein Homology CDS 4322301 4323803 . - 0 ID=cds-WP_011260314.1;Parent=gene-IXO1104_RS20245;Dbxref=Genbank:WP_011260314.1;Name=WP_011260314.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346356.1;locus_tag=IXO1104_RS20245;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011260314.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4323807 4324247 . - . ID=gene-IXO1104_RS20250;Name=IXO1104_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20250;old_locus_tag=IXO1104_20195 NZ_CP047492.1 Protein Homology CDS 4323807 4324247 . - 0 ID=cds-WP_011260315.1;Parent=gene-IXO1104_RS20250;Dbxref=Genbank:WP_011260315.1;Name=WP_011260315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804768.1;locus_tag=IXO1104_RS20250;product=response regulator;protein_id=WP_011260315.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4324244 4326055 . - . ID=gene-IXO1104_RS20255;Name=IXO1104_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20255;old_locus_tag=IXO1104_20200 NZ_CP047492.1 Protein Homology CDS 4324244 4326055 . - 0 ID=cds-WP_012444117.1;Parent=gene-IXO1104_RS20255;Dbxref=Genbank:WP_012444117.1;Name=WP_012444117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368210.1;locus_tag=IXO1104_RS20255;product=ATP-binding protein;protein_id=WP_012444117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4326341 4326712 . - . ID=gene-IXO1104_RS20260;Name=IXO1104_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20260;old_locus_tag=IXO1104_20205 NZ_CP047492.1 Protein Homology CDS 4326341 4326712 . - 0 ID=cds-WP_011260317.1;Parent=gene-IXO1104_RS20260;Dbxref=Genbank:WP_011260317.1;Name=WP_011260317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113055.1;locus_tag=IXO1104_RS20260;product=BON domain-containing protein;protein_id=WP_011260317.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4326863 4327915 . + . ID=gene-IXO1104_RS20265;Name=IXO1104_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20265;old_locus_tag=IXO1104_20210 NZ_CP047492.1 Protein Homology CDS 4326863 4327915 . + 0 ID=cds-WP_011260318.1;Parent=gene-IXO1104_RS20265;Dbxref=Genbank:WP_011260318.1;Name=WP_011260318.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368214.1;locus_tag=IXO1104_RS20265;product=oxidoreductase;protein_id=WP_011260318.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4328254 4329195 . - . ID=gene-IXO1104_RS20270;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=IXO1104_RS20270;old_locus_tag=IXO1104_20215 NZ_CP047492.1 Protein Homology CDS 4328254 4329195 . - 0 ID=cds-WP_011260319.1;Parent=gene-IXO1104_RS20270;Dbxref=Genbank:WP_011260319.1;Name=WP_011260319.1;Ontology_term=GO:0006098,GO:0004616;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990351.1;locus_tag=IXO1104_RS20270;product=decarboxylating 6-phosphogluconate dehydrogenase;protein_id=WP_011260319.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4329216 4330553 . - . ID=gene-IXO1104_RS20275;Name=IXO1104_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20275;old_locus_tag=IXO1104_20220 NZ_CP047492.1 Protein Homology CDS 4329216 4330553 . - 0 ID=cds-WP_027703464.1;Parent=gene-IXO1104_RS20275;Dbxref=Genbank:WP_027703464.1;Name=WP_027703464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368217.1;locus_tag=IXO1104_RS20275;product=hypothetical protein;protein_id=WP_027703464.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4330725 4331105 . - . ID=gene-IXO1104_RS20280;Name=IXO1104_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20280;old_locus_tag=IXO1104_20225 NZ_CP047492.1 Protein Homology CDS 4330725 4331105 . - 0 ID=cds-WP_011409446.1;Parent=gene-IXO1104_RS20280;Dbxref=Genbank:WP_011409446.1;Name=WP_011409446.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911143.1;locus_tag=IXO1104_RS20280;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011409446.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4331230 4331991 . - . ID=gene-IXO1104_RS20285;Name=IXO1104_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20285;old_locus_tag=IXO1104_20230 NZ_CP047492.1 Protein Homology CDS 4331230 4331991 . - 0 ID=cds-WP_012444115.1;Parent=gene-IXO1104_RS20285;Dbxref=Genbank:WP_012444115.1;Name=WP_012444115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155343.1;locus_tag=IXO1104_RS20285;product=DUF2242 domain-containing protein;protein_id=WP_012444115.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4332066 4333120 . - . ID=gene-IXO1104_RS20290;Name=IXO1104_RS20290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20290;old_locus_tag=IXO1104_20235;pseudo=true NZ_CP047492.1 Protein Homology CDS 4332066 4333120 . - 0 ID=cds-IXO1104_RS20290;Parent=gene-IXO1104_RS20290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089336.1;locus_tag=IXO1104_RS20290;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4333113 4334226 . - . ID=gene-IXO1104_RS20295;Name=IXO1104_RS20295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20295;old_locus_tag=IXO1104_20240;pseudo=true NZ_CP047492.1 Protein Homology CDS 4333113 4334226 . - 0 ID=cds-IXO1104_RS20295;Parent=gene-IXO1104_RS20295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162368.1;locus_tag=IXO1104_RS20295;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4334249 4335652 . - . ID=gene-IXO1104_RS20300;Name=IXO1104_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20300;old_locus_tag=IXO1104_20245 NZ_CP047492.1 Protein Homology CDS 4334249 4335652 . - 0 ID=cds-WP_011409450.1;Parent=gene-IXO1104_RS20300;Dbxref=Genbank:WP_011409450.1;Name=WP_011409450.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990339.1;locus_tag=IXO1104_RS20300;product=nicotinate phosphoribosyltransferase;protein_id=WP_011409450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4335775 4336830 . - . ID=gene-IXO1104_RS20305;Name=IXO1104_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20305;old_locus_tag=IXO1104_20250 NZ_CP047492.1 Protein Homology CDS 4335775 4336830 . - 0 ID=cds-WP_011260326.1;Parent=gene-IXO1104_RS20305;Dbxref=Genbank:WP_011260326.1;Name=WP_011260326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303950.1;locus_tag=IXO1104_RS20305;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_011260326.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4336898 4337857 . + . ID=gene-IXO1104_RS20310;Name=IXO1104_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20310;old_locus_tag=IXO1104_20255 NZ_CP047492.1 Protein Homology CDS 4336898 4337857 . + 0 ID=cds-WP_044756430.1;Parent=gene-IXO1104_RS20310;Dbxref=Genbank:WP_044756430.1;Name=WP_044756430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444111.1;locus_tag=IXO1104_RS20310;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_044756430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4338149 4340308 . - . ID=gene-IXO1104_RS20315;Name=IXO1104_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20315;old_locus_tag=IXO1104_20260 NZ_CP047492.1 Protein Homology CDS 4338149 4340308 . - 0 ID=cds-WP_171970776.1;Parent=gene-IXO1104_RS20315;Dbxref=Genbank:WP_171970776.1;Name=WP_171970776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155351.1;locus_tag=IXO1104_RS20315;product=carboxy terminal-processing peptidase;protein_id=WP_171970776.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4340732 4341745 . - . ID=gene-IXO1104_RS20320;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20320;old_locus_tag=IXO1104_20265 NZ_CP047492.1 Protein Homology CDS 4340732 4341745 . - 0 ID=cds-WP_027703466.1;Parent=gene-IXO1104_RS20320;Dbxref=Genbank:WP_027703466.1;Name=WP_027703466.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301161.1;locus_tag=IXO1104_RS20320;product=lipoyl synthase;protein_id=WP_027703466.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4341760 4342458 . - . ID=gene-IXO1104_RS20325;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=IXO1104_RS20325;old_locus_tag=IXO1104_20270 NZ_CP047492.1 Protein Homology CDS 4341760 4342458 . - 0 ID=cds-WP_027703467.1;Parent=gene-IXO1104_RS20325;Dbxref=Genbank:WP_027703467.1;Name=WP_027703467.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158468.1;locus_tag=IXO1104_RS20325;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_027703467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4342446 4342724 . - . ID=gene-IXO1104_RS20330;Name=IXO1104_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20330;old_locus_tag=IXO1104_20275 NZ_CP047492.1 Protein Homology CDS 4342446 4342724 . - 0 ID=cds-WP_011409453.1;Parent=gene-IXO1104_RS20330;Dbxref=Genbank:WP_011409453.1;Name=WP_011409453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409453.1;locus_tag=IXO1104_RS20330;product=YbeD family protein;protein_id=WP_011409453.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4342851 4343756 . - . ID=gene-IXO1104_RS20335;Name=IXO1104_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20335;old_locus_tag=IXO1104_20280 NZ_CP047492.1 Protein Homology CDS 4342851 4343756 . - 0 ID=cds-WP_094187779.1;Parent=gene-IXO1104_RS20335;Dbxref=Genbank:WP_094187779.1;Name=WP_094187779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267582.1;locus_tag=IXO1104_RS20335;product=peptidoglycan-binding protein;protein_id=WP_094187779.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4343791 4344996 . - . ID=gene-IXO1104_RS20340;Name=IXO1104_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20340;old_locus_tag=IXO1104_20285 NZ_CP047492.1 Protein Homology CDS 4343791 4344996 . - 0 ID=cds-WP_075239975.1;Parent=gene-IXO1104_RS20340;Dbxref=Genbank:WP_075239975.1;Name=WP_075239975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115444.1;locus_tag=IXO1104_RS20340;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_075239975.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4345499 4346914 . - . ID=gene-IXO1104_RS20345;Name=IXO1104_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20345;old_locus_tag=IXO1104_20290 NZ_CP047492.1 Protein Homology CDS 4345499 4346914 . - 0 ID=cds-WP_075239973.1;Parent=gene-IXO1104_RS20345;Dbxref=Genbank:WP_075239973.1;Name=WP_075239973.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155355.1;locus_tag=IXO1104_RS20345;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_075239973.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4346911 4348050 . - . ID=gene-IXO1104_RS20350;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=IXO1104_RS20350;old_locus_tag=IXO1104_20295 NZ_CP047492.1 Protein Homology CDS 4346911 4348050 . - 0 ID=cds-WP_011260336.1;Parent=gene-IXO1104_RS20350;Dbxref=Genbank:WP_011260336.1;Name=WP_011260336.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118980.1;locus_tag=IXO1104_RS20350;product=lytic murein transglycosylase B;protein_id=WP_011260336.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4348319 4348789 . - . ID=gene-IXO1104_RS20355;Name=IXO1104_RS20355;end_range=4348789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20355;old_locus_tag=IXO1104_20300;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4348319 4348789 . - 0 ID=cds-IXO1104_RS20355;Parent=gene-IXO1104_RS20355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004650;end_range=4348789,.;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346338.1;locus_tag=IXO1104_RS20355;partial=true;product=glycosyl hydrolase family 28 protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4348681 4349247 . - . ID=gene-IXO1104_RS20360;Name=IXO1104_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20360 NZ_CP047492.1 Protein Homology CDS 4348681 4349247 . - 0 ID=cds-WP_241846854.1;Parent=gene-IXO1104_RS20360;Dbxref=Genbank:WP_241846854.1;Name=WP_241846854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=IXO1104_RS20360;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_241846854.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4349591 4350066 . - . ID=gene-IXO1104_RS20365;Name=IXO1104_RS20365;end_range=4350066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20365;old_locus_tag=IXO1104_20310;partial=true;pseudo=true;start_range=.,4349591 NZ_CP047492.1 Protein Homology CDS 4349591 4350066 . - 0 ID=cds-IXO1104_RS20365;Parent=gene-IXO1104_RS20365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4350066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS20365;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4349591;transl_table=11 NZ_CP047492.1 RefSeq gene 4350156 4351274 . - . ID=gene-IXO1104_RS20370;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20370;old_locus_tag=IXO1104_20315 NZ_CP047492.1 Protein Homology CDS 4350156 4351274 . - 0 ID=cds-WP_011260340.1;Parent=gene-IXO1104_RS20370;Dbxref=Genbank:WP_011260340.1;Name=WP_011260340.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573354.1;locus_tag=IXO1104_RS20370;product=rod shape-determining protein RodA;protein_id=WP_011260340.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4351271 4353331 . - . ID=gene-IXO1104_RS20375;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20375;old_locus_tag=IXO1104_20320 NZ_CP047492.1 Protein Homology CDS 4351271 4353331 . - 0 ID=cds-WP_011260341.1;Parent=gene-IXO1104_RS20375;Dbxref=Genbank:WP_011260341.1;Name=WP_011260341.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303045.1;locus_tag=IXO1104_RS20375;product=penicillin-binding protein 2;protein_id=WP_011260341.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4353335 4353820 . - . ID=gene-IXO1104_RS20380;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=IXO1104_RS20380;old_locus_tag=IXO1104_20325 NZ_CP047492.1 Protein Homology CDS 4353335 4353820 . - 0 ID=cds-WP_011409462.1;Parent=gene-IXO1104_RS20380;Dbxref=Genbank:WP_011409462.1;Name=WP_011409462.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911183.1;locus_tag=IXO1104_RS20380;product=rod shape-determining protein MreD;protein_id=WP_011409462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4353817 4355163 . - . ID=gene-IXO1104_RS20385;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=IXO1104_RS20385;old_locus_tag=IXO1104_20330 NZ_CP047492.1 Protein Homology CDS 4353817 4355163 . - 0 ID=cds-WP_027703470.1;Parent=gene-IXO1104_RS20385;Dbxref=Genbank:WP_027703470.1;Name=WP_027703470.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112559.1;locus_tag=IXO1104_RS20385;product=rod shape-determining protein MreC;protein_id=WP_027703470.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4355336 4356382 . - . ID=gene-IXO1104_RS20390;Name=IXO1104_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20390;old_locus_tag=IXO1104_20335 NZ_CP047492.1 Protein Homology CDS 4355336 4356382 . - 0 ID=cds-WP_012444096.1;Parent=gene-IXO1104_RS20390;Dbxref=Genbank:WP_012444096.1;Name=WP_012444096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=IXO1104_RS20390;product=rod shape-determining protein;protein_id=WP_012444096.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4356658 4357590 . + . ID=gene-IXO1104_RS20395;Name=IXO1104_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20395;old_locus_tag=IXO1104_20340 NZ_CP047492.1 Protein Homology CDS 4356658 4357590 . + 0 ID=cds-WP_011260344.1;Parent=gene-IXO1104_RS20395;Dbxref=Genbank:WP_011260344.1;Name=WP_011260344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038567.1;locus_tag=IXO1104_RS20395;product=carbohydrate kinase family protein;protein_id=WP_011260344.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4357702 4358314 . - . ID=gene-IXO1104_RS20400;Name=IXO1104_RS20400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20400;old_locus_tag=IXO1104_20345;pseudo=true NZ_CP047492.1 Protein Homology CDS 4357702 4358314 . - 0 ID=cds-IXO1104_RS20400;Parent=gene-IXO1104_RS20400;Note=frameshifted%3B internal stop;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472603.1;locus_tag=IXO1104_RS20400;product=HAD-IA family hydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4358401 4358751 . - . ID=gene-IXO1104_RS20405;Name=IXO1104_RS20405;end_range=4358751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20405;old_locus_tag=IXO1104_20350;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4358401 4358751 . - 0 ID=cds-IXO1104_RS20405;Parent=gene-IXO1104_RS20405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4358751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS20405;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4358784 4359239 . - . ID=gene-IXO1104_RS20410;Name=IXO1104_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20410;old_locus_tag=IXO1104_20355 NZ_CP047492.1 Protein Homology CDS 4358784 4359239 . - 0 ID=cds-WP_075240205.1;Parent=gene-IXO1104_RS20410;Dbxref=Genbank:WP_075240205.1;Name=WP_075240205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346314.1;locus_tag=IXO1104_RS20410;product=nucleoside deaminase;protein_id=WP_075240205.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4359236 4359736 . - . ID=gene-IXO1104_RS20415;Name=IXO1104_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20415;old_locus_tag=IXO1104_20360 NZ_CP047492.1 Protein Homology CDS 4359236 4359736 . - 0 ID=cds-WP_027703680.1;Parent=gene-IXO1104_RS20415;Dbxref=Genbank:WP_027703680.1;Name=WP_027703680.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159113.1;locus_tag=IXO1104_RS20415;product=GNAT family N-acetyltransferase;protein_id=WP_027703680.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4359837 4360837 . - . ID=gene-IXO1104_RS20420;Name=IXO1104_RS20420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20420;old_locus_tag=IXO1104_20365;pseudo=true NZ_CP047492.1 Protein Homology CDS 4359837 4360837 . - 0 ID=cds-IXO1104_RS20420;Parent=gene-IXO1104_RS20420;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=IXO1104_RS20420;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4360987 4362063 . - . ID=gene-IXO1104_RS20425;Name=IXO1104_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20425;old_locus_tag=IXO1104_20370 NZ_CP047492.1 Protein Homology CDS 4360987 4362063 . - 0 ID=cds-WP_075239998.1;Parent=gene-IXO1104_RS20425;Dbxref=Genbank:WP_075239998.1;Name=WP_075239998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482758.1;locus_tag=IXO1104_RS20425;product=HlyD family secretion protein;protein_id=WP_075239998.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4362060 4363772 . - . ID=gene-IXO1104_RS20430;Name=IXO1104_RS20430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20430;old_locus_tag=IXO1104_20375;pseudo=true NZ_CP047492.1 Protein Homology CDS 4362060 4363772 . - 0 ID=cds-IXO1104_RS20430;Parent=gene-IXO1104_RS20430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038582.1;locus_tag=IXO1104_RS20430;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4363802 4364563 . + . ID=gene-IXO1104_RS20435;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=IXO1104_RS20435;old_locus_tag=IXO1104_20380 NZ_CP047492.1 Protein Homology CDS 4363802 4364563 . + 0 ID=cds-WP_011409470.1;Parent=gene-IXO1104_RS20435;Dbxref=Genbank:WP_011409470.1;Name=WP_011409470.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303204.1;locus_tag=IXO1104_RS20435;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_011409470.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4364736 4365626 . + . ID=gene-IXO1104_RS20440;Name=IXO1104_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20440;old_locus_tag=IXO1104_20385 NZ_CP047492.1 Protein Homology CDS 4364736 4365626 . + 0 ID=cds-WP_011409471.1;Parent=gene-IXO1104_RS20440;Dbxref=Genbank:WP_011409471.1;Name=WP_011409471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302598.1;locus_tag=IXO1104_RS20440;product=GGDEF domain-containing protein;protein_id=WP_011409471.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4365748 4367760 . + . ID=gene-IXO1104_RS20445;Name=IXO1104_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20445;old_locus_tag=IXO1104_20390 NZ_CP047492.1 Protein Homology CDS 4365748 4367760 . + 0 ID=cds-WP_012444089.1;Parent=gene-IXO1104_RS20445;Dbxref=Genbank:WP_012444089.1;Name=WP_012444089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162760.1;locus_tag=IXO1104_RS20445;product=M1 family metallopeptidase;protein_id=WP_012444089.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4367932 4368651 . + . ID=gene-IXO1104_RS20450;Name=IXO1104_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20450;old_locus_tag=IXO1104_20395 NZ_CP047492.1 Protein Homology CDS 4367932 4368651 . + 0 ID=cds-WP_011409473.1;Parent=gene-IXO1104_RS20450;Dbxref=Genbank:WP_011409473.1;Name=WP_011409473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804719.1;locus_tag=IXO1104_RS20450;product=hypothetical protein;protein_id=WP_011409473.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4368951 4369574 . + . ID=gene-IXO1104_RS20455;Name=IXO1104_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20455;old_locus_tag=IXO1104_20400 NZ_CP047492.1 Protein Homology CDS 4368951 4369574 . + 0 ID=cds-WP_011260358.1;Parent=gene-IXO1104_RS20455;Dbxref=Genbank:WP_011260358.1;Name=WP_011260358.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260358.1;locus_tag=IXO1104_RS20455;product=HAD-IA family hydrolase;protein_id=WP_011260358.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4369748 4371115 . - . ID=gene-IXO1104_RS20460;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=IXO1104_RS20460;old_locus_tag=IXO1104_20405 NZ_CP047492.1 Protein Homology CDS 4369748 4371115 . - 0 ID=cds-WP_011260359.1;Parent=gene-IXO1104_RS20460;Dbxref=Genbank:WP_011260359.1;Name=WP_011260359.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804707.1;locus_tag=IXO1104_RS20460;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_011260359.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4371220 4371771 . - . ID=gene-IXO1104_RS20465;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=IXO1104_RS20465;old_locus_tag=IXO1104_20410 NZ_CP047492.1 Protein Homology CDS 4371220 4371771 . - 0 ID=cds-WP_011260360.1;Parent=gene-IXO1104_RS20465;Dbxref=Genbank:WP_011260360.1;Name=WP_011260360.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=IXO1104_RS20465;product=ATP-dependent protease subunit HslV;protein_id=WP_011260360.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4371929 4372005 . - . ID=gene-IXO1104_RS20470;Name=IXO1104_RS20470;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20470;old_locus_tag=IXO1104_20415 NZ_CP047492.1 cmsearch ncRNA 4371929 4372005 . - . ID=rna-IXO1104_RS20470;Parent=gene-IXO1104_RS20470;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20470;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4371929 4372005 . - . ID=exon-IXO1104_RS20470-1;Parent=rna-IXO1104_RS20470;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20470;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4372287 4373204 . - . ID=gene-IXO1104_RS20475;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=IXO1104_RS20475;old_locus_tag=IXO1104_20420 NZ_CP047492.1 Protein Homology CDS 4372287 4373204 . - 0 ID=cds-WP_012444084.1;Parent=gene-IXO1104_RS20475;Dbxref=Genbank:WP_012444084.1;Name=WP_012444084.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173863.1;locus_tag=IXO1104_RS20475;product=tyrosine recombinase XerC;protein_id=WP_012444084.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4373410 4374081 . - . ID=gene-IXO1104_RS20480;Name=IXO1104_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20480;old_locus_tag=IXO1104_20425 NZ_CP047492.1 Protein Homology CDS 4373410 4374081 . - 0 ID=cds-WP_011409476.1;Parent=gene-IXO1104_RS20480;Dbxref=Genbank:WP_011409476.1;Name=WP_011409476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482765.1;locus_tag=IXO1104_RS20480;product=DUF484 family protein;protein_id=WP_011409476.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4374078 4374932 . - . ID=gene-IXO1104_RS20485;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=IXO1104_RS20485;old_locus_tag=IXO1104_20430 NZ_CP047492.1 Protein Homology CDS 4374078 4374932 . - 0 ID=cds-WP_011260363.1;Parent=gene-IXO1104_RS20485;Dbxref=Genbank:WP_011260363.1;Name=WP_011260363.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260363.1;locus_tag=IXO1104_RS20485;product=diaminopimelate epimerase;protein_id=WP_011260363.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4374922 4375158 . - . ID=gene-IXO1104_RS20490;Name=IXO1104_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20490;old_locus_tag=IXO1104_20435 NZ_CP047492.1 Protein Homology CDS 4374922 4375158 . - 0 ID=cds-WP_011409477.1;Parent=gene-IXO1104_RS20490;Dbxref=Genbank:WP_011409477.1;Name=WP_011409477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155427.1;locus_tag=IXO1104_RS20490;product=lipoprotein;protein_id=WP_011409477.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4375216 4375614 . - . ID=gene-IXO1104_RS20495;Name=IXO1104_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20495;old_locus_tag=IXO1104_20440 NZ_CP047492.1 Protein Homology CDS 4375216 4375614 . - 0 ID=cds-WP_011409478.1;Parent=gene-IXO1104_RS20495;Dbxref=Genbank:WP_011409478.1;Name=WP_011409478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965023.1;locus_tag=IXO1104_RS20495;product=YbaN family protein;protein_id=WP_011409478.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4375987 4378122 . - . ID=gene-IXO1104_RS20500;Name=IXO1104_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20500;old_locus_tag=IXO1104_20445 NZ_CP047492.1 Protein Homology CDS 4375987 4378122 . - 0 ID=cds-WP_027703683.1;Parent=gene-IXO1104_RS20500;Dbxref=Genbank:WP_027703683.1;Name=WP_027703683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501853.1;locus_tag=IXO1104_RS20500;product=oligopeptidase B;protein_id=WP_027703683.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4378246 4379430 . + . ID=gene-IXO1104_RS20505;Name=IXO1104_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20505;old_locus_tag=IXO1104_20450 NZ_CP047492.1 Protein Homology CDS 4378246 4379430 . + 0 ID=cds-WP_011409479.1;Parent=gene-IXO1104_RS20505;Dbxref=Genbank:WP_011409479.1;Name=WP_011409479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155429.1;locus_tag=IXO1104_RS20505;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011409479.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4379704 4379764 . - . ID=gene-IXO1104_RS20510;Name=IXO1104_RS20510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20510;old_locus_tag=IXO1104_20455 NZ_CP047492.1 cmsearch ncRNA 4379704 4379764 . - . ID=rna-IXO1104_RS20510;Parent=gene-IXO1104_RS20510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20510;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4379704 4379764 . - . ID=exon-IXO1104_RS20510-1;Parent=rna-IXO1104_RS20510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20510;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4379756 4380196 . - . ID=gene-IXO1104_RS20515;Name=IXO1104_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20515;old_locus_tag=IXO1104_20460 NZ_CP047492.1 GeneMarkS-2+ CDS 4379756 4380196 . - 0 ID=cds-WP_103073476.1;Parent=gene-IXO1104_RS20515;Dbxref=Genbank:WP_103073476.1;Name=WP_103073476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS20515;product=hypothetical protein;protein_id=WP_103073476.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4380270 4382363 . - . ID=gene-IXO1104_RS20520;Name=IXO1104_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20520;old_locus_tag=IXO1104_20465 NZ_CP047492.1 Protein Homology CDS 4380270 4382363 . - 0 ID=cds-WP_011409481.1;Parent=gene-IXO1104_RS20520;Dbxref=Genbank:WP_011409481.1;Name=WP_011409481.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903637.1;locus_tag=IXO1104_RS20520;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_011409481.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4382431 4382742 . - . ID=gene-IXO1104_RS20525;Name=IXO1104_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20525;old_locus_tag=IXO1104_20470 NZ_CP047492.1 Protein Homology CDS 4382431 4382742 . - 0 ID=cds-WP_011409482.1;Parent=gene-IXO1104_RS20525;Dbxref=Genbank:WP_011409482.1;Name=WP_011409482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368301.1;locus_tag=IXO1104_RS20525;product=hypothetical protein;protein_id=WP_011409482.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4383130 4383699 . + . ID=gene-IXO1104_RS20530;Name=IXO1104_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20530;old_locus_tag=IXO1104_20475 NZ_CP047492.1 Protein Homology CDS 4383130 4383699 . + 0 ID=cds-WP_011260370.1;Parent=gene-IXO1104_RS20530;Dbxref=Genbank:WP_011260370.1;Name=WP_011260370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368302.1;locus_tag=IXO1104_RS20530;product=lipocalin family protein;protein_id=WP_011260370.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4383808 4384773 . - . ID=gene-IXO1104_RS20535;Name=IXO1104_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20535;old_locus_tag=IXO1104_20480 NZ_CP047492.1 Protein Homology CDS 4383808 4384773 . - 0 ID=cds-WP_011260371.1;Parent=gene-IXO1104_RS20535;Dbxref=Genbank:WP_011260371.1;Name=WP_011260371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451607.1;locus_tag=IXO1104_RS20535;product=YafY family transcriptional regulator;protein_id=WP_011260371.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4385332 4386132 . + . ID=gene-IXO1104_RS20540;Name=IXO1104_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20540;old_locus_tag=IXO1104_20485 NZ_CP047492.1 Protein Homology CDS 4385332 4386132 . + 0 ID=cds-WP_011260372.1;Parent=gene-IXO1104_RS20540;Dbxref=Genbank:WP_011260372.1;Name=WP_011260372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302001.1;locus_tag=IXO1104_RS20540;product=DUF481 domain-containing protein;protein_id=WP_011260372.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4386683 4387597 . - . ID=gene-IXO1104_RS20545;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=IXO1104_RS20545;old_locus_tag=IXO1104_20490 NZ_CP047492.1 Protein Homology CDS 4386683 4387597 . - 0 ID=cds-WP_011409484.1;Parent=gene-IXO1104_RS20545;Dbxref=Genbank:WP_011409484.1;Name=WP_011409484.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155437.1;locus_tag=IXO1104_RS20545;product=hydroxymethylbilane synthase;protein_id=WP_011409484.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4387628 4388365 . - . ID=gene-IXO1104_RS20550;Name=IXO1104_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20550;old_locus_tag=IXO1104_20495 NZ_CP047492.1 Protein Homology CDS 4387628 4388365 . - 0 ID=cds-WP_011409485.1;Parent=gene-IXO1104_RS20550;Dbxref=Genbank:WP_011409485.1;Name=WP_011409485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915517.1;locus_tag=IXO1104_RS20550;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_011409485.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4388396 4389448 . - . ID=gene-IXO1104_RS20555;Name=IXO1104_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20555;old_locus_tag=IXO1104_20500 NZ_CP047492.1 Protein Homology CDS 4388396 4389448 . - 0 ID=cds-WP_011260375.1;Parent=gene-IXO1104_RS20555;Dbxref=Genbank:WP_011260375.1;Name=WP_011260375.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409486.1;locus_tag=IXO1104_RS20555;product=histidine kinase;protein_id=WP_011260375.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4389453 4390121 . - . ID=gene-IXO1104_RS20560;Name=IXO1104_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20560;old_locus_tag=IXO1104_20505 NZ_CP047492.1 Protein Homology CDS 4389453 4390121 . - 0 ID=cds-WP_011260376.1;Parent=gene-IXO1104_RS20560;Dbxref=Genbank:WP_011260376.1;Name=WP_011260376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050437.1;locus_tag=IXO1104_RS20560;product=alpha/beta hydrolase;protein_id=WP_011260376.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4390273 4392210 . - . ID=gene-IXO1104_RS20565;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=IXO1104_RS20565;old_locus_tag=IXO1104_20510 NZ_CP047492.1 Protein Homology CDS 4390273 4392210 . - 0 ID=cds-WP_033013308.1;Parent=gene-IXO1104_RS20565;Dbxref=Genbank:WP_033013308.1;Name=WP_033013308.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915513.1;locus_tag=IXO1104_RS20565;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_033013308.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4392682 4392758 . - . ID=gene-IXO1104_RS20570;Name=IXO1104_RS20570;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20570;old_locus_tag=IXO1104_20515 NZ_CP047492.1 cmsearch ncRNA 4392682 4392758 . - . ID=rna-IXO1104_RS20570;Parent=gene-IXO1104_RS20570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20570;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4392682 4392758 . - . ID=exon-IXO1104_RS20570-1;Parent=rna-IXO1104_RS20570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20570;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 4392937 4393310 . + . ID=gene-IXO1104_RS20575;Name=IXO1104_RS20575;end_range=4393310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20575;old_locus_tag=IXO1104_20520;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4392937 4393310 . + 0 ID=cds-IXO1104_RS20575;Parent=gene-IXO1104_RS20575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4393310,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS20575;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4393325 4394560 . - . ID=gene-IXO1104_RS20580;Name=IXO1104_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20580;old_locus_tag=IXO1104_20525 NZ_CP047492.1 Protein Homology CDS 4393325 4394560 . - 0 ID=cds-WP_133264513.1;Parent=gene-IXO1104_RS20580;Dbxref=Genbank:WP_133264513.1;Name=WP_133264513.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS20580;product=ISL3 family transposase;protein_id=WP_133264513.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4394625 4395020 . + . ID=gene-IXO1104_RS20585;Name=IXO1104_RS20585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20585;old_locus_tag=IXO1104_20530;partial=true;pseudo=true;start_range=.,4394625 NZ_CP047492.1 Protein Homology CDS 4394625 4395020 . + 0 ID=cds-IXO1104_RS20585;Parent=gene-IXO1104_RS20585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS20585;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,4394625;transl_table=11 NZ_CP047492.1 RefSeq gene 4395334 4396983 . - . ID=gene-IXO1104_RS20590;Name=IXO1104_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20590;old_locus_tag=IXO1104_20540 NZ_CP047492.1 Protein Homology CDS 4395334 4396983 . - 0 ID=cds-WP_011260378.1;Parent=gene-IXO1104_RS20590;Dbxref=Genbank:WP_011260378.1;Name=WP_011260378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489719.1;locus_tag=IXO1104_RS20590;product=M28 family metallopeptidase;protein_id=WP_011260378.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4397152 4398131 . - . ID=gene-IXO1104_RS20595;Name=IXO1104_RS20595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20595;old_locus_tag=IXO1104_20545;pseudo=true NZ_CP047492.1 Protein Homology CDS 4397152 4398131 . - 0 ID=cds-IXO1104_RS20595;Parent=gene-IXO1104_RS20595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462838.1;locus_tag=IXO1104_RS20595;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4398374 4399861 . - . ID=gene-IXO1104_RS20600;Name=IXO1104_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20600;old_locus_tag=IXO1104_20550 NZ_CP047492.1 Protein Homology CDS 4398374 4399861 . - 0 ID=cds-WP_012444070.1;Parent=gene-IXO1104_RS20600;Dbxref=Genbank:WP_012444070.1;Name=WP_012444070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116599.1;locus_tag=IXO1104_RS20600;product=SulP family inorganic anion transporter;protein_id=WP_012444070.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4400069 4401529 . + . ID=gene-IXO1104_RS20605;Name=IXO1104_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20605;old_locus_tag=IXO1104_20555 NZ_CP047492.1 Protein Homology CDS 4400069 4401529 . + 0 ID=cds-WP_075240643.1;Parent=gene-IXO1104_RS20605;Dbxref=Genbank:WP_075240643.1;Name=WP_075240643.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444069.1;locus_tag=IXO1104_RS20605;product=cellulase family glycosylhydrolase;protein_id=WP_075240643.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4401865 4402238 . + . ID=gene-IXO1104_RS20610;Name=IXO1104_RS20610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20610;partial=true;pseudo=true;start_range=.,4401865 NZ_CP047492.1 Protein Homology CDS 4401865 4402238 . + 0 ID=cds-IXO1104_RS20610;Parent=gene-IXO1104_RS20610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472611.1;locus_tag=IXO1104_RS20610;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,4401865;transl_table=11 NZ_CP047492.1 RefSeq gene 4402243 4402319 . - . ID=gene-IXO1104_RS20615;Name=IXO1104_RS20615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20615;old_locus_tag=IXO1104_20570 NZ_CP047492.1 cmsearch ncRNA 4402243 4402319 . - . ID=rna-IXO1104_RS20615;Parent=gene-IXO1104_RS20615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20615;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4402243 4402319 . - . ID=exon-IXO1104_RS20615-1;Parent=rna-IXO1104_RS20615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20615;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4402764 4405388 . - . ID=gene-IXO1104_RS20620;Name=IXO1104_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20620;old_locus_tag=IXO1104_20575 NZ_CP047492.1 Protein Homology CDS 4402764 4405388 . - 0 ID=cds-WP_143698729.1;Parent=gene-IXO1104_RS20620;Dbxref=Genbank:WP_143698729.1;Name=WP_143698729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409492.1;locus_tag=IXO1104_RS20620;product=PAS domain S-box protein;protein_id=WP_143698729.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4405643 4408531 . + . ID=gene-IXO1104_RS20625;Name=IXO1104_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20625;old_locus_tag=IXO1104_20580 NZ_CP047492.1 Protein Homology CDS 4405643 4408531 . + 0 ID=cds-WP_075240063.1;Parent=gene-IXO1104_RS20625;Dbxref=Genbank:WP_075240063.1;Name=WP_075240063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260383.1;locus_tag=IXO1104_RS20625;product=insulinase family protein;protein_id=WP_075240063.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4409079 4410008 . + . ID=gene-IXO1104_RS20630;Name=IXO1104_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20630;old_locus_tag=IXO1104_20585 NZ_CP047492.1 Protein Homology CDS 4409079 4410008 . + 0 ID=cds-WP_075240064.1;Parent=gene-IXO1104_RS20630;Dbxref=Genbank:WP_075240064.1;Name=WP_075240064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118451.1;locus_tag=IXO1104_RS20630;product=GAF domain-containing protein;protein_id=WP_075240064.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4410047 4411051 . - . ID=gene-IXO1104_RS20635;Name=IXO1104_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20635;old_locus_tag=IXO1104_20590 NZ_CP047492.1 Protein Homology CDS 4410047 4411051 . - 0 ID=cds-WP_075240065.1;Parent=gene-IXO1104_RS20635;Dbxref=Genbank:WP_075240065.1;Name=WP_075240065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376082.1;locus_tag=IXO1104_RS20635;product=hypothetical protein;protein_id=WP_075240065.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4411294 4412057 . - . ID=gene-IXO1104_RS20640;Name=IXO1104_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20640;old_locus_tag=IXO1104_20595 NZ_CP047492.1 Protein Homology CDS 4411742 4412057 . - 0 ID=cds-WP_094187715.1-14;Parent=gene-IXO1104_RS20640;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS20640;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4411294 4411742 . - 2 ID=cds-WP_094187715.1-14;Parent=gene-IXO1104_RS20640;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS20640;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4412253 4413005 . - . ID=gene-IXO1104_RS20645;Name=IXO1104_RS20645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20645;old_locus_tag=IXO1104_20600;pseudo=true NZ_CP047492.1 Protein Homology CDS 4412253 4413005 . - 0 ID=cds-IXO1104_RS20645;Parent=gene-IXO1104_RS20645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160053.1;locus_tag=IXO1104_RS20645;product=endonuclease;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4413105 4413890 . + . ID=gene-IXO1104_RS20650;Name=IXO1104_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20650;old_locus_tag=IXO1104_20605 NZ_CP047492.1 Protein Homology CDS 4413105 4413890 . + 0 ID=cds-WP_075240246.1;Parent=gene-IXO1104_RS20650;Dbxref=Genbank:WP_075240246.1;Name=WP_075240246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409496.1;locus_tag=IXO1104_RS20650;product=DUF72 domain-containing protein;protein_id=WP_075240246.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4414144 4415817 . + . ID=gene-IXO1104_RS20655;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20655;old_locus_tag=IXO1104_20610 NZ_CP047492.1 Protein Homology CDS 4414144 4415817 . + 0 ID=cds-WP_011260388.1;Parent=gene-IXO1104_RS20655;Dbxref=Genbank:WP_011260388.1;Name=WP_011260388.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167145.1;locus_tag=IXO1104_RS20655;product=alpha%2Calpha-trehalase TreA;protein_id=WP_011260388.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4416234 4417553 . + . ID=gene-IXO1104_RS20660;Name=IXO1104_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20660;old_locus_tag=IXO1104_20615 NZ_CP047492.1 Protein Homology CDS 4416234 4417553 . + 0 ID=cds-WP_263117725.1;Parent=gene-IXO1104_RS20660;Dbxref=Genbank:WP_263117725.1;Name=WP_263117725.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS20660;product=IS701 family transposase;protein_id=WP_263117725.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4417766 4418734 . - . ID=gene-IXO1104_RS20665;Name=IXO1104_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20665;old_locus_tag=IXO1104_20620 NZ_CP047492.1 Protein Homology CDS 4417766 4418734 . - 0 ID=cds-WP_263117726.1;Parent=gene-IXO1104_RS20665;Dbxref=Genbank:WP_263117726.1;Name=WP_263117726.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS20665;product=IS5-like element ISXo1 family transposase;protein_id=WP_263117726.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4418998 4419444 . - . ID=gene-IXO1104_RS20670;Name=IXO1104_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20670;old_locus_tag=IXO1104_20625 NZ_CP047492.1 Protein Homology CDS 4418998 4419444 . - 0 ID=cds-WP_011409497.1;Parent=gene-IXO1104_RS20670;Dbxref=Genbank:WP_011409497.1;Name=WP_011409497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158413.1;locus_tag=IXO1104_RS20670;product=avidin/streptavidin family protein;protein_id=WP_011409497.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4419775 4420059 . + . ID=gene-IXO1104_RS20675;Name=IXO1104_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20675;old_locus_tag=IXO1104_20630 NZ_CP047492.1 Protein Homology CDS 4419775 4420059 . + 0 ID=cds-WP_012444053.1;Parent=gene-IXO1104_RS20675;Dbxref=Genbank:WP_012444053.1;Name=WP_012444053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=IXO1104_RS20675;product=hypothetical protein;protein_id=WP_012444053.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4420178 4420450 . + . ID=gene-IXO1104_RS20680;Name=IXO1104_RS20680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20680;old_locus_tag=IXO1104_20635;partial=true;pseudo=true;start_range=.,4420178 NZ_CP047492.1 Protein Homology CDS 4420178 4420450 . + 0 ID=cds-IXO1104_RS20680;Parent=gene-IXO1104_RS20680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448601.1;locus_tag=IXO1104_RS20680;partial=true;product=AIM24 family protein;pseudo=true;start_range=.,4420178;transl_table=11 NZ_CP047492.1 RefSeq gene 4420654 4421565 . - . ID=gene-IXO1104_RS20685;Name=IXO1104_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20685;old_locus_tag=IXO1104_20640 NZ_CP047492.1 Protein Homology CDS 4420654 4421565 . - 0 ID=cds-WP_027703841.1;Parent=gene-IXO1104_RS20685;Dbxref=Genbank:WP_027703841.1;Name=WP_027703841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501814.1;locus_tag=IXO1104_RS20685;product=magnesium transporter;protein_id=WP_027703841.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4421811 4422806 . + . ID=gene-IXO1104_RS20690;Name=IXO1104_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20690;old_locus_tag=IXO1104_20645 NZ_CP047492.1 Protein Homology CDS 4421811 4422806 . + 0 ID=cds-WP_011409498.1;Parent=gene-IXO1104_RS20690;Dbxref=Genbank:WP_011409498.1;Name=WP_011409498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155501.1;locus_tag=IXO1104_RS20690;product=hypothetical protein;protein_id=WP_011409498.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4422900 4424330 . - . ID=gene-IXO1104_RS20695;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=IXO1104_RS20695;old_locus_tag=IXO1104_20650 NZ_CP047492.1 Protein Homology CDS 4422900 4424330 . - 0 ID=cds-WP_027703843.1;Parent=gene-IXO1104_RS20695;Dbxref=Genbank:WP_027703843.1;Name=WP_027703843.1;Ontology_term=GO:0006865,GO:0055085,GO:0016021;gbkey=CDS;gene=cycA;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167467.1;locus_tag=IXO1104_RS20695;product=D-serine/D-alanine/glycine transporter;protein_id=WP_027703843.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4424952 4425286 . - . ID=gene-IXO1104_RS20700;Name=IXO1104_RS20700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20700;pseudo=true NZ_CP047492.1 Protein Homology CDS 4424952 4425286 . - 0 ID=cds-IXO1104_RS20700;Parent=gene-IXO1104_RS20700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155503.1;locus_tag=IXO1104_RS20700;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4425497 4427143 . + . ID=gene-IXO1104_RS20705;Name=IXO1104_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20705;old_locus_tag=IXO1104_20655 NZ_CP047492.1 Protein Homology CDS 4425497 4427143 . + 0 ID=cds-WP_178382260.1;Parent=gene-IXO1104_RS20705;Dbxref=Genbank:WP_178382260.1;Name=WP_178382260.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444046.1;locus_tag=IXO1104_RS20705;product=glycoside hydrolase family 6 protein;protein_id=WP_178382260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4427552 4429324 . + . ID=gene-IXO1104_RS20710;Name=IXO1104_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20710;old_locus_tag=IXO1104_20660 NZ_CP047492.1 Protein Homology CDS 4427552 4429324 . + 0 ID=cds-WP_075240399.1;Parent=gene-IXO1104_RS20710;Dbxref=Genbank:WP_075240399.1;Name=WP_075240399.1;Ontology_term=GO:0030248;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501805.1;locus_tag=IXO1104_RS20710;product=expansin EXLX1 family cellulose-binding protein;protein_id=WP_075240399.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4429600 4430475 . - . ID=gene-IXO1104_RS20715;Name=IXO1104_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20715;old_locus_tag=IXO1104_20665 NZ_CP047492.1 Protein Homology CDS 4429600 4430475 . - 0 ID=cds-WP_011409500.1;Parent=gene-IXO1104_RS20715;Dbxref=Genbank:WP_011409500.1;Name=WP_011409500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159126.1;locus_tag=IXO1104_RS20715;product=DMT family transporter;protein_id=WP_011409500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4430643 4431551 . + . ID=gene-IXO1104_RS20720;Name=IXO1104_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20720;old_locus_tag=IXO1104_20670 NZ_CP047492.1 Protein Homology CDS 4430643 4431551 . + 0 ID=cds-WP_228329724.1;Parent=gene-IXO1104_RS20720;Dbxref=Genbank:WP_228329724.1;Name=WP_228329724.1;Ontology_term=GO:0016645;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966052.1;locus_tag=IXO1104_RS20720;product=MnmC family methyltransferase;protein_id=WP_228329724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4431643 4432245 . + . ID=gene-IXO1104_RS20725;Name=IXO1104_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20725;old_locus_tag=IXO1104_20675 NZ_CP047492.1 Protein Homology CDS 4431643 4432245 . + 0 ID=cds-WP_011260397.1;Parent=gene-IXO1104_RS20725;Dbxref=Genbank:WP_011260397.1;Name=WP_011260397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448615.1;locus_tag=IXO1104_RS20725;product=hypothetical protein;protein_id=WP_011260397.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4432194 4433215 . + . ID=gene-IXO1104_RS20730;Name=IXO1104_RS20730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20730;old_locus_tag=IXO1104_20680;pseudo=true NZ_CP047492.1 Protein Homology CDS 4432194 4433215 . + 0 ID=cds-IXO1104_RS20730;Parent=gene-IXO1104_RS20730;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1;locus_tag=IXO1104_RS20730;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4433591 4434682 . + . ID=gene-IXO1104_RS20735;Name=IXO1104_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20735;old_locus_tag=IXO1104_20685 NZ_CP047492.1 Protein Homology CDS 4433591 4434682 . + 0 ID=cds-WP_075240590.1;Parent=gene-IXO1104_RS20735;Dbxref=Genbank:WP_075240590.1;Name=WP_075240590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915468.1;locus_tag=IXO1104_RS20735;product=DUF1615 domain-containing protein;protein_id=WP_075240590.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4434733 4436165 . - . ID=gene-IXO1104_RS20740;Name=IXO1104_RS20740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20740;old_locus_tag=IXO1104_20690;pseudo=true NZ_CP047492.1 Protein Homology CDS 4434733 4436165 . - 0 ID=cds-IXO1104_RS20740;Parent=gene-IXO1104_RS20740;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155515.1;locus_tag=IXO1104_RS20740;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4436585 4438909 . + . ID=gene-IXO1104_RS20745;Name=IXO1104_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20745;old_locus_tag=IXO1104_20695 NZ_CP047492.1 Protein Homology CDS 4436585 4438909 . + 0 ID=cds-WP_041182286.1;Parent=gene-IXO1104_RS20745;Dbxref=Genbank:WP_041182286.1;Name=WP_041182286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158410.1;locus_tag=IXO1104_RS20745;product=S9 family peptidase;protein_id=WP_041182286.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4438979 4439045 . - . ID=gene-IXO1104_RS20750;Name=IXO1104_RS20750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20750;old_locus_tag=IXO1104_20700 NZ_CP047492.1 cmsearch ncRNA 4438979 4439045 . - . ID=rna-IXO1104_RS20750;Parent=gene-IXO1104_RS20750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20750;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4438979 4439045 . - . ID=exon-IXO1104_RS20750-1;Parent=rna-IXO1104_RS20750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20750;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4439105 4441051 . - . ID=gene-IXO1104_RS20755;Name=IXO1104_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20755;old_locus_tag=IXO1104_20705 NZ_CP047492.1 Protein Homology CDS 4439105 4441051 . - 0 ID=cds-WP_011260402.1;Parent=gene-IXO1104_RS20755;Dbxref=Genbank:WP_011260402.1;Name=WP_011260402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409508.1;locus_tag=IXO1104_RS20755;product=S9 family peptidase;protein_id=WP_011260402.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4441241 4441414 . + . ID=gene-IXO1104_RS20760;Name=IXO1104_RS20760;end_range=4441414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20760;partial=true;pseudo=true;start_range=.,4441241 NZ_CP047492.1 Protein Homology CDS 4441241 4441414 . + 0 ID=cds-IXO1104_RS20760;Parent=gene-IXO1104_RS20760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4441414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804395.1;locus_tag=IXO1104_RS20760;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4441241;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4441411 4441617 . + . ID=gene-IXO1104_RS20765;Name=IXO1104_RS20765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20765;old_locus_tag=IXO1104_20710;partial=true;pseudo=true;start_range=.,4441411 NZ_CP047492.1 Protein Homology CDS 4441411 4441617 . + 0 ID=cds-IXO1104_RS20765;Parent=gene-IXO1104_RS20765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972686.1;locus_tag=IXO1104_RS20765;partial=true;product=DUF4126 domain-containing protein;pseudo=true;start_range=.,4441411;transl_table=11 NZ_CP047492.1 RefSeq gene 4441693 4441768 . + . ID=gene-IXO1104_RS20770;Name=IXO1104_RS20770;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS20770;old_locus_tag=IXO1104_20715 NZ_CP047492.1 cmsearch ncRNA 4441693 4441768 . + . ID=rna-IXO1104_RS20770;Parent=gene-IXO1104_RS20770;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20770;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4441693 4441768 . + . ID=exon-IXO1104_RS20770-1;Parent=rna-IXO1104_RS20770;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS20770;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4442008 4443591 . + . ID=gene-IXO1104_RS20775;Name=IXO1104_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20775;old_locus_tag=IXO1104_20720 NZ_CP047492.1 Protein Homology CDS 4442008 4443591 . + 0 ID=cds-WP_011260404.1;Parent=gene-IXO1104_RS20775;Dbxref=Genbank:WP_011260404.1;Name=WP_011260404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923743.1;locus_tag=IXO1104_RS20775;product=SDR family oxidoreductase;protein_id=WP_011260404.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4443923 4444510 . - . ID=gene-IXO1104_RS20780;Name=IXO1104_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20780;old_locus_tag=IXO1104_20725 NZ_CP047492.1 Protein Homology CDS 4443923 4444510 . - 0 ID=cds-WP_228329747.1;Parent=gene-IXO1104_RS20780;Dbxref=Genbank:WP_228329747.1;Name=WP_228329747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114900.1;locus_tag=IXO1104_RS20780;product=hypothetical protein;protein_id=WP_228329747.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4444718 4445759 . - . ID=gene-IXO1104_RS20785;Name=IXO1104_RS20785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20785;old_locus_tag=IXO1104_20730;pseudo=true NZ_CP047492.1 Protein Homology CDS 4444718 4445759 . - 0 ID=cds-IXO1104_RS20785;Parent=gene-IXO1104_RS20785;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS20785;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4445868 4446776 . - . ID=gene-IXO1104_RS20790;Name=IXO1104_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20790;old_locus_tag=IXO1104_20735 NZ_CP047492.1 Protein Homology CDS 4445868 4446776 . - 0 ID=cds-WP_075240638.1;Parent=gene-IXO1104_RS20790;Dbxref=Genbank:WP_075240638.1;Name=WP_075240638.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409513.1;locus_tag=IXO1104_RS20790;product=beta-eliminating lyase-related protein;protein_id=WP_075240638.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4446751 4448226 . - . ID=gene-IXO1104_RS20795;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=IXO1104_RS20795;old_locus_tag=IXO1104_20740 NZ_CP047492.1 Protein Homology CDS 4446751 4448226 . - 0 ID=cds-WP_011409514.1;Parent=gene-IXO1104_RS20795;Dbxref=Genbank:WP_011409514.1;Name=WP_011409514.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1;locus_tag=IXO1104_RS20795;product=anthranilate synthase component I;protein_id=WP_011409514.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4448831 4449760 . - . ID=gene-IXO1104_RS20800;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=IXO1104_RS20800;old_locus_tag=IXO1104_20745 NZ_CP047492.1 Protein Homology CDS 4448831 4449760 . - 0 ID=cds-WP_011260408.1;Parent=gene-IXO1104_RS20800;Dbxref=Genbank:WP_011260408.1;Name=WP_011260408.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260408.1;locus_tag=IXO1104_RS20800;product=lipid kinase YegS;protein_id=WP_011260408.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4449995 4450486 . - . ID=gene-IXO1104_RS20805;Name=IXO1104_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20805;old_locus_tag=IXO1104_20750 NZ_CP047492.1 Protein Homology CDS 4449995 4450486 . - 0 ID=cds-WP_011260409.1;Parent=gene-IXO1104_RS20805;Dbxref=Genbank:WP_011260409.1;Name=WP_011260409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368051.1;locus_tag=IXO1104_RS20805;product=GNAT family N-acetyltransferase;protein_id=WP_011260409.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4450483 4451184 . - . ID=gene-IXO1104_RS20810;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=IXO1104_RS20810;old_locus_tag=IXO1104_20755 NZ_CP047492.1 Protein Homology CDS 4450483 4451184 . - 0 ID=cds-WP_011409515.1;Parent=gene-IXO1104_RS20810;Dbxref=Genbank:WP_011409515.1;Name=WP_011409515.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164154.1;locus_tag=IXO1104_RS20810;product=ribulose-phosphate 3-epimerase;protein_id=WP_011409515.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4451549 4451878 . - . ID=gene-IXO1104_RS20815;Name=IXO1104_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20815;old_locus_tag=IXO1104_20760 NZ_CP047492.1 Protein Homology CDS 4451549 4451878 . - 0 ID=cds-WP_011409516.1;Parent=gene-IXO1104_RS20815;Dbxref=Genbank:WP_011409516.1;Name=WP_011409516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1;locus_tag=IXO1104_RS20815;product=DnaJ domain-containing protein;protein_id=WP_011409516.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4452087 4453013 . + . ID=gene-IXO1104_RS20820;Name=IXO1104_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20820;old_locus_tag=IXO1104_20765 NZ_CP047492.1 Protein Homology CDS 4452087 4453013 . + 0 ID=cds-WP_012444032.1;Parent=gene-IXO1104_RS20820;Dbxref=Genbank:WP_012444032.1;Name=WP_012444032.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1;locus_tag=IXO1104_RS20820;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_012444032.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4453476 4453883 . + . ID=gene-IXO1104_RS20825;Name=IXO1104_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20825;old_locus_tag=IXO1104_20770 NZ_CP047492.1 GeneMarkS-2+ CDS 4453476 4453883 . + 0 ID=cds-WP_229002688.1;Parent=gene-IXO1104_RS20825;Dbxref=Genbank:WP_229002688.1;Name=WP_229002688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS20825;product=hypothetical protein;protein_id=WP_229002688.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4453885 4454919 . - . ID=gene-IXO1104_RS20830;Name=IXO1104_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20830;old_locus_tag=IXO1104_20775 NZ_CP047492.1 Protein Homology CDS 4453885 4454919 . - 0 ID=cds-WP_011407587.1-5;Parent=gene-IXO1104_RS20830;Dbxref=Genbank:WP_011407587.1;Name=WP_011407587.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1104_RS20830;product=IS630 family transposase;protein_id=WP_011407587.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4455036 4455269 . + . ID=gene-IXO1104_RS20835;Name=IXO1104_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20835;old_locus_tag=IXO1104_20780 NZ_CP047492.1 Protein Homology CDS 4455036 4455269 . + 0 ID=cds-WP_229002686.1;Parent=gene-IXO1104_RS20835;Dbxref=Genbank:WP_229002686.1;Name=WP_229002686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014045.2;locus_tag=IXO1104_RS20835;product=NYN domain-containing protein;protein_id=WP_229002686.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4455281 4455664 . + . ID=gene-IXO1104_RS20840;Name=IXO1104_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20840;old_locus_tag=IXO1104_20785 NZ_CP047492.1 GeneMarkS-2+ CDS 4455281 4455664 . + 0 ID=cds-WP_011409517.1;Parent=gene-IXO1104_RS20840;Dbxref=Genbank:WP_011409517.1;Name=WP_011409517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS20840;product=hypothetical protein;protein_id=WP_011409517.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4456093 4457645 . + . ID=gene-IXO1104_RS20845;Name=IXO1104_RS20845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20845;old_locus_tag=IXO1104_20790;pseudo=true NZ_CP047492.1 Protein Homology CDS 4456093 4457645 . + 0 ID=cds-IXO1104_RS20845;Parent=gene-IXO1104_RS20845;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1;locus_tag=IXO1104_RS20845;product=M4 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4457787 4458272 . + . ID=gene-IXO1104_RS20850;Name=IXO1104_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20850;old_locus_tag=IXO1104_20795 NZ_CP047492.1 Protein Homology CDS 4457787 4458272 . + 0 ID=cds-WP_011409520.1;Parent=gene-IXO1104_RS20850;Dbxref=Genbank:WP_011409520.1;Name=WP_011409520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575562.1;locus_tag=IXO1104_RS20850;product=DUF962 domain-containing protein;protein_id=WP_011409520.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4458811 4461639 . + . ID=gene-IXO1104_RS20855;Name=IXO1104_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20855;old_locus_tag=IXO1104_20805 NZ_CP047492.1 Protein Homology CDS 4458811 4461639 . + 0 ID=cds-WP_011409522.1;Parent=gene-IXO1104_RS20855;Dbxref=Genbank:WP_011409522.1;Name=WP_011409522.1;Ontology_term=GO:0098662,GO:0005451;gbkey=CDS;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302198.1;locus_tag=IXO1104_RS20855;product=monovalent cation/H+ antiporter subunit A;protein_id=WP_011409522.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4461639 4462013 . + . ID=gene-IXO1104_RS20860;Name=IXO1104_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20860;old_locus_tag=IXO1104_20810 NZ_CP047492.1 Protein Homology CDS 4461639 4462013 . + 0 ID=cds-WP_024712495.1;Parent=gene-IXO1104_RS20860;Dbxref=Genbank:WP_024712495.1;Name=WP_024712495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346152.1;locus_tag=IXO1104_RS20860;product=Na+/H+ antiporter subunit C;protein_id=WP_024712495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4462010 4463554 . + . ID=gene-IXO1104_RS20865;Name=IXO1104_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20865;old_locus_tag=IXO1104_20815 NZ_CP047492.1 Protein Homology CDS 4462010 4463554 . + 0 ID=cds-WP_075239895.1;Parent=gene-IXO1104_RS20865;Dbxref=Genbank:WP_075239895.1;Name=WP_075239895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161271.1;locus_tag=IXO1104_RS20865;product=monovalent cation/H+ antiporter subunit D;protein_id=WP_075239895.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4463551 4464057 . + . ID=gene-IXO1104_RS20870;Name=IXO1104_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20870;old_locus_tag=IXO1104_20820 NZ_CP047492.1 Protein Homology CDS 4463551 4464057 . + 0 ID=cds-WP_024745838.1;Parent=gene-IXO1104_RS20870;Dbxref=Genbank:WP_024745838.1;Name=WP_024745838.1;Ontology_term=GO:0006812,GO:0008324,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967828.1;locus_tag=IXO1104_RS20870;product=Na+/H+ antiporter subunit E;protein_id=WP_024745838.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4464054 4464338 . + . ID=gene-IXO1104_RS20875;Name=IXO1104_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20875;old_locus_tag=IXO1104_20825 NZ_CP047492.1 Protein Homology CDS 4464054 4464338 . + 0 ID=cds-WP_011260421.1;Parent=gene-IXO1104_RS20875;Dbxref=Genbank:WP_011260421.1;Name=WP_011260421.1;Ontology_term=GO:0034220,GO:0015075;gbkey=CDS;go_function=ion transmembrane transporter activity|0015075||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501684.1;locus_tag=IXO1104_RS20875;product=K+/H+ antiporter subunit F;protein_id=WP_011260421.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4464335 4464688 . + . ID=gene-IXO1104_RS20880;Name=IXO1104_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20880;old_locus_tag=IXO1104_20830 NZ_CP047492.1 Protein Homology CDS 4464335 4464688 . + 0 ID=cds-WP_011260422.1;Parent=gene-IXO1104_RS20880;Dbxref=Genbank:WP_011260422.1;Name=WP_011260422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302193.1;locus_tag=IXO1104_RS20880;product=Na+/H+ antiporter subunit G;protein_id=WP_011260422.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4465287 4466243 . + . ID=gene-IXO1104_RS20885;Name=IXO1104_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20885;old_locus_tag=IXO1104_20835 NZ_CP047492.1 Protein Homology CDS 4465287 4466243 . + 0 ID=cds-WP_011407237.1-12;Parent=gene-IXO1104_RS20885;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS20885;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4466716 4467684 . + . ID=gene-IXO1104_RS20890;Name=IXO1104_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20890;old_locus_tag=IXO1104_20840 NZ_CP047492.1 Protein Homology CDS 4466716 4467684 . + 0 ID=cds-WP_011258802.1-16;Parent=gene-IXO1104_RS20890;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS20890;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4468116 4469441 . - . ID=gene-IXO1104_RS20895;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=IXO1104_RS20895;old_locus_tag=IXO1104_20845 NZ_CP047492.1 Protein Homology CDS 4468116 4469441 . - 0 ID=cds-WP_011409528.1;Parent=gene-IXO1104_RS20895;Dbxref=Genbank:WP_011409528.1;Name=WP_011409528.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501682.1;locus_tag=IXO1104_RS20895;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_011409528.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4469806 4470921 . - . ID=gene-IXO1104_RS20900;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=IXO1104_RS20900;old_locus_tag=IXO1104_20850 NZ_CP047492.1 Protein Homology CDS 4469806 4470921 . - 0 ID=cds-WP_012444023.1;Parent=gene-IXO1104_RS20900;Dbxref=Genbank:WP_012444023.1;Name=WP_012444023.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112910.1;locus_tag=IXO1104_RS20900;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_012444023.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4471047 4471535 . + . ID=gene-IXO1104_RS20905;Name=IXO1104_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20905;old_locus_tag=IXO1104_20855 NZ_CP047492.1 Protein Homology CDS 4471047 4471535 . + 0 ID=cds-WP_011260425.1;Parent=gene-IXO1104_RS20905;Dbxref=Genbank:WP_011260425.1;Name=WP_011260425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035688.1;locus_tag=IXO1104_RS20905;product=MarR family transcriptional regulator;protein_id=WP_011260425.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4471892 4472482 . - . ID=gene-IXO1104_RS20910;Name=IXO1104_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20910;old_locus_tag=IXO1104_20860 NZ_CP047492.1 Protein Homology CDS 4471892 4472482 . - 0 ID=cds-WP_011409530.1;Parent=gene-IXO1104_RS20910;Dbxref=Genbank:WP_011409530.1;Name=WP_011409530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931590.1;locus_tag=IXO1104_RS20910;product=thioredoxin family protein;protein_id=WP_011409530.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4472494 4474002 . - . ID=gene-IXO1104_RS20915;Name=IXO1104_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20915;old_locus_tag=IXO1104_20865 NZ_CP047492.1 Protein Homology CDS 4472494 4474002 . - 0 ID=cds-WP_027703915.1;Parent=gene-IXO1104_RS20915;Dbxref=Genbank:WP_027703915.1;Name=WP_027703915.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509241.1;locus_tag=IXO1104_RS20915;product=oligopeptide:H+ symporter;protein_id=WP_027703915.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4474445 4475338 . - . ID=gene-IXO1104_RS20920;Name=IXO1104_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20920;old_locus_tag=IXO1104_20870 NZ_CP047492.1 Protein Homology CDS 4474445 4475338 . - 0 ID=cds-WP_011260428.1;Parent=gene-IXO1104_RS20920;Dbxref=Genbank:WP_011260428.1;Name=WP_011260428.1;Ontology_term=GO:0019441,GO:0004833,GO:0020037;gbkey=CDS;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA,heme binding|0020037||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301448.1;locus_tag=IXO1104_RS20920;product=tryptophan 2%2C3-dioxygenase family protein;protein_id=WP_011260428.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4475744 4476678 . + . ID=gene-IXO1104_RS20925;Name=IXO1104_RS20925;end_range=4476678,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20925;old_locus_tag=IXO1104_20875;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4475744 4476678 . + 0 ID=cds-IXO1104_RS20925;Parent=gene-IXO1104_RS20925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4476678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575533.1;locus_tag=IXO1104_RS20925;partial=true;product=lamin tail domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4476651 4477370 . + . ID=gene-IXO1104_RS20930;Name=IXO1104_RS20930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20930;old_locus_tag=IXO1104_20880;partial=true;pseudo=true;start_range=.,4476651 NZ_CP047492.1 Protein Homology CDS 4476651 4477370 . + 0 ID=cds-IXO1104_RS20930;Parent=gene-IXO1104_RS20930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016624;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850583.1;locus_tag=IXO1104_RS20930;partial=true;product=thiamine pyrophosphate-dependent enzyme;pseudo=true;start_range=.,4476651;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4477363 4477914 . + . ID=gene-IXO1104_RS20935;Name=IXO1104_RS20935;end_range=4477914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20935;old_locus_tag=IXO1104_20885;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4477363 4477914 . + 0 ID=cds-IXO1104_RS20935;Parent=gene-IXO1104_RS20935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4477914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367996.1;locus_tag=IXO1104_RS20935;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4478003 4478968 . + . ID=gene-IXO1104_RS20940;Name=IXO1104_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20940;old_locus_tag=IXO1104_20890 NZ_CP047492.1 Protein Homology CDS 4478003 4478968 . + 0 ID=cds-WP_263117728.1;Parent=gene-IXO1104_RS20940;Dbxref=Genbank:WP_263117728.1;Name=WP_263117728.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS20940;product=IS1595 family transposase;protein_id=WP_263117728.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4478975 4479499 . + . ID=gene-IXO1104_RS20945;Name=IXO1104_RS20945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20945;old_locus_tag=IXO1104_20895;partial=true;pseudo=true;start_range=.,4478975 NZ_CP047492.1 Protein Homology CDS 4478975 4479499 . + 0 ID=cds-IXO1104_RS20945;Parent=gene-IXO1104_RS20945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367996.1;locus_tag=IXO1104_RS20945;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;start_range=.,4478975;transl_table=11 NZ_CP047492.1 RefSeq gene 4479501 4479881 . + . ID=gene-IXO1104_RS20950;Name=IXO1104_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20950;old_locus_tag=IXO1104_20900 NZ_CP047492.1 Protein Homology CDS 4479501 4479881 . + 0 ID=cds-WP_075240757.1;Parent=gene-IXO1104_RS20950;Dbxref=Genbank:WP_075240757.1;Name=WP_075240757.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260435.1;locus_tag=IXO1104_RS20950;product=SH3 domain-containing protein;protein_id=WP_075240757.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4479886 4479995 . - . ID=gene-IXO1104_RS20955;Name=IXO1104_RS20955;end_range=4479995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS20955;old_locus_tag=IXO1104_20905;partial=true;pseudo=true;start_range=.,4479886 NZ_CP047492.1 Protein Homology CDS 4479886 4479995 . - 0 ID=cds-IXO1104_RS20955;Parent=gene-IXO1104_RS20955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4479995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558069.1;locus_tag=IXO1104_RS20955;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4479886;transl_table=11 NZ_CP047492.1 RefSeq gene 4480084 4480968 . - . ID=gene-IXO1104_RS20960;Name=IXO1104_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20960;old_locus_tag=IXO1104_20910 NZ_CP047492.1 Protein Homology CDS 4480084 4480968 . - 0 ID=cds-WP_027703940.1;Parent=gene-IXO1104_RS20960;Dbxref=Genbank:WP_027703940.1;Name=WP_027703940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992724.1;locus_tag=IXO1104_RS20960;product=hypothetical protein;protein_id=WP_027703940.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4481058 4482353 . + . ID=gene-IXO1104_RS20965;Name=IXO1104_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20965;old_locus_tag=IXO1104_20915 NZ_CP047492.1 Protein Homology CDS 4481058 4482353 . + 0 ID=cds-WP_075239392.1;Parent=gene-IXO1104_RS20965;Dbxref=Genbank:WP_075239392.1;Name=WP_075239392.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260437.1;locus_tag=IXO1104_RS20965;product=acetyl-CoA C-acetyltransferase;protein_id=WP_075239392.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4482483 4483007 . + . ID=gene-IXO1104_RS20970;Name=IXO1104_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20970;old_locus_tag=IXO1104_20920 NZ_CP047492.1 Protein Homology CDS 4482483 4483007 . + 0 ID=cds-WP_011409538.1;Parent=gene-IXO1104_RS20970;Dbxref=Genbank:WP_011409538.1;Name=WP_011409538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117625.1;locus_tag=IXO1104_RS20970;product=hypothetical protein;protein_id=WP_011409538.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4483433 4484698 . - . ID=gene-IXO1104_RS20975;Name=IXO1104_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20975;old_locus_tag=IXO1104_20925 NZ_CP047492.1 Protein Homology CDS 4483433 4484698 . - 0 ID=cds-WP_011260439.1;Parent=gene-IXO1104_RS20975;Dbxref=Genbank:WP_011260439.1;Name=WP_011260439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112149.1;locus_tag=IXO1104_RS20975;product=porphyrin biosynthesis protein;protein_id=WP_011260439.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4484695 4485672 . - . ID=gene-IXO1104_RS20980;Name=IXO1104_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20980;old_locus_tag=IXO1104_20930 NZ_CP047492.1 Protein Homology CDS 4484695 4485672 . - 0 ID=cds-WP_075240714.1;Parent=gene-IXO1104_RS20980;Dbxref=Genbank:WP_075240714.1;Name=WP_075240714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488502.1;locus_tag=IXO1104_RS20980;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_075240714.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4485776 4486552 . - . ID=gene-IXO1104_RS20985;Name=IXO1104_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20985;old_locus_tag=IXO1104_20935 NZ_CP047492.1 Protein Homology CDS 4485776 4486552 . - 0 ID=cds-WP_011409540.1;Parent=gene-IXO1104_RS20985;Dbxref=Genbank:WP_011409540.1;Name=WP_011409540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488504.1;locus_tag=IXO1104_RS20985;product=uroporphyrinogen-III synthase;protein_id=WP_011409540.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4486755 4487564 . + . ID=gene-IXO1104_RS20990;Name=IXO1104_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20990;old_locus_tag=IXO1104_20940 NZ_CP047492.1 Protein Homology CDS 4486755 4487564 . + 0 ID=cds-WP_011260442.1;Parent=gene-IXO1104_RS20990;Dbxref=Genbank:WP_011260442.1;Name=WP_011260442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089004.1;locus_tag=IXO1104_RS20990;product=glycosyltransferase family 25 protein;protein_id=WP_011260442.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4487572 4488370 . - . ID=gene-IXO1104_RS20995;Name=IXO1104_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS20995;old_locus_tag=IXO1104_20945 NZ_CP047492.1 Protein Homology CDS 4488099 4488370 . - 0 ID=cds-WP_094187731.1-4;Parent=gene-IXO1104_RS20995;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20995;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4487572 4488100 . - 1 ID=cds-WP_094187731.1-4;Parent=gene-IXO1104_RS20995;Dbxref=Genbank:WP_094187731.1;Name=WP_094187731.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS20995;product=IS5 family transposase;protein_id=WP_094187731.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4488413 4489030 . - . ID=gene-IXO1104_RS21000;Name=IXO1104_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21000;old_locus_tag=IXO1104_20950 NZ_CP047492.1 Protein Homology CDS 4488413 4489030 . - 0 ID=cds-WP_042465763.1;Parent=gene-IXO1104_RS21000;Dbxref=Genbank:WP_042465763.1;Name=WP_042465763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112508.1;locus_tag=IXO1104_RS21000;product=hypothetical protein;protein_id=WP_042465763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4489155 4489730 . - . ID=gene-IXO1104_RS21005;Name=IXO1104_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21005;old_locus_tag=IXO1104_20955 NZ_CP047492.1 Protein Homology CDS 4489155 4489730 . - 0 ID=cds-WP_075240531.1;Parent=gene-IXO1104_RS21005;Dbxref=Genbank:WP_075240531.1;Name=WP_075240531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157015.1;locus_tag=IXO1104_RS21005;product=hypothetical protein;protein_id=WP_075240531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4489868 4490617 . - . ID=gene-IXO1104_RS21010;Name=IXO1104_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21010;old_locus_tag=IXO1104_20960 NZ_CP047492.1 Protein Homology CDS 4489868 4490617 . - 0 ID=cds-WP_075239561.1;Parent=gene-IXO1104_RS21010;Dbxref=Genbank:WP_075239561.1;Name=WP_075239561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038877.1;locus_tag=IXO1104_RS21010;product=HAD family hydrolase;protein_id=WP_075239561.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4490655 4491062 . - . ID=gene-IXO1104_RS21015;Name=IXO1104_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21015;old_locus_tag=IXO1104_20965 NZ_CP047492.1 Protein Homology CDS 4490655 4491062 . - 0 ID=cds-WP_024712457.1;Parent=gene-IXO1104_RS21015;Dbxref=Genbank:WP_024712457.1;Name=WP_024712457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157013.1;locus_tag=IXO1104_RS21015;product=EF-hand domain-containing protein;protein_id=WP_024712457.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4491302 4491643 . - . ID=gene-IXO1104_RS21020;Name=IXO1104_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21020;old_locus_tag=IXO1104_20970 NZ_CP047492.1 Protein Homology CDS 4491302 4491643 . - 0 ID=cds-WP_011409547.1;Parent=gene-IXO1104_RS21020;Dbxref=Genbank:WP_011409547.1;Name=WP_011409547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157012.1;locus_tag=IXO1104_RS21020;product=hypothetical protein;protein_id=WP_011409547.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4491869 4492246 . - . ID=gene-IXO1104_RS21025;Name=IXO1104_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21025;old_locus_tag=IXO1104_20975 NZ_CP047492.1 Protein Homology CDS 4491869 4492246 . - 0 ID=cds-WP_011260449.1;Parent=gene-IXO1104_RS21025;Dbxref=Genbank:WP_011260449.1;Name=WP_011260449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911463.1;locus_tag=IXO1104_RS21025;product=hypothetical protein;protein_id=WP_011260449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4492457 4492654 . - . ID=gene-IXO1104_RS21030;Name=IXO1104_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21030;old_locus_tag=IXO1104_20980 NZ_CP047492.1 Protein Homology CDS 4492457 4492654 . - 0 ID=cds-WP_011260450.1;Parent=gene-IXO1104_RS21030;Dbxref=Genbank:WP_011260450.1;Name=WP_011260450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903162.1;locus_tag=IXO1104_RS21030;product=CPXCG motif-containing cysteine-rich protein;protein_id=WP_011260450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4492961 4493707 . - . ID=gene-IXO1104_RS21035;Name=IXO1104_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21035;old_locus_tag=IXO1104_20985 NZ_CP047492.1 Protein Homology CDS 4492961 4493707 . - 0 ID=cds-WP_012444006.1;Parent=gene-IXO1104_RS21035;Dbxref=Genbank:WP_012444006.1;Name=WP_012444006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973544.1;locus_tag=IXO1104_RS21035;product=M15 family metallopeptidase;protein_id=WP_012444006.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4493800 4494606 . - . ID=gene-IXO1104_RS21040;Name=IXO1104_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21040;old_locus_tag=IXO1104_20990 NZ_CP047492.1 Protein Homology CDS 4493800 4494606 . - 0 ID=cds-WP_011409549.1;Parent=gene-IXO1104_RS21040;Dbxref=Genbank:WP_011409549.1;Name=WP_011409549.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850303.1;locus_tag=IXO1104_RS21040;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011409549.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4494830 4496242 . + . ID=gene-IXO1104_RS21045;Name=IXO1104_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21045;old_locus_tag=IXO1104_20995 NZ_CP047492.1 Protein Homology CDS 4494830 4496242 . + 0 ID=cds-WP_012444005.1;Parent=gene-IXO1104_RS21045;Dbxref=Genbank:WP_012444005.1;Name=WP_012444005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501731.1;locus_tag=IXO1104_RS21045;product=SH3 domain-containing protein;protein_id=WP_012444005.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4496239 4497336 . + . ID=gene-IXO1104_RS21050;Name=IXO1104_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21050;old_locus_tag=IXO1104_21000 NZ_CP047492.1 Protein Homology CDS 4496239 4497336 . + 0 ID=cds-WP_027703925.1;Parent=gene-IXO1104_RS21050;Dbxref=Genbank:WP_027703925.1;Name=WP_027703925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005987897.1;locus_tag=IXO1104_RS21050;product=dipeptide epimerase;protein_id=WP_027703925.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4497341 4497417 . - . ID=gene-IXO1104_RS21055;Name=IXO1104_RS21055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21055;old_locus_tag=IXO1104_21005 NZ_CP047492.1 cmsearch ncRNA 4497341 4497417 . - . ID=rna-IXO1104_RS21055;Parent=gene-IXO1104_RS21055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21055;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4497341 4497417 . - . ID=exon-IXO1104_RS21055-1;Parent=rna-IXO1104_RS21055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21055;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4497491 4498289 . - . ID=gene-IXO1104_RS21060;Name=IXO1104_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21060;old_locus_tag=IXO1104_21010 NZ_CP047492.1 Protein Homology CDS 4498018 4498289 . - 0 ID=cds-WP_094187728.1-9;Parent=gene-IXO1104_RS21060;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS21060;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4497491 4498019 . - 1 ID=cds-WP_094187728.1-9;Parent=gene-IXO1104_RS21060;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS21060;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4498509 4499471 . + . ID=gene-IXO1104_RS21065;Name=IXO1104_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21065;old_locus_tag=IXO1104_21015 NZ_CP047492.1 Protein Homology CDS 4498509 4499471 . + 0 ID=cds-WP_011409456.1-3;Parent=gene-IXO1104_RS21065;Dbxref=Genbank:WP_011409456.1;Name=WP_011409456.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS21065;product=IS1595 family transposase;protein_id=WP_011409456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4500148 4500924 . + . ID=gene-IXO1104_RS21070;Name=IXO1104_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21070;old_locus_tag=IXO1104_21020 NZ_CP047492.1 Protein Homology CDS 4500148 4500924 . + 0 ID=cds-WP_011260456.1;Parent=gene-IXO1104_RS21070;Dbxref=Genbank:WP_011260456.1;Name=WP_011260456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157008.1;locus_tag=IXO1104_RS21070;product=hypothetical protein;protein_id=WP_011260456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4500921 4502237 . + . ID=gene-IXO1104_RS21075;Name=IXO1104_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21075;old_locus_tag=IXO1104_21025 NZ_CP047492.1 Protein Homology CDS 4500921 4502237 . + 0 ID=cds-WP_027704068.1;Parent=gene-IXO1104_RS21075;Dbxref=Genbank:WP_027704068.1;Name=WP_027704068.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409554.1;locus_tag=IXO1104_RS21075;product=amino acid permease;protein_id=WP_027704068.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4502296 4503059 . - . ID=gene-IXO1104_RS21080;Name=IXO1104_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21080;old_locus_tag=IXO1104_21030 NZ_CP047492.1 Protein Homology CDS 4502744 4503059 . - 0 ID=cds-WP_094187715.1-15;Parent=gene-IXO1104_RS21080;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS21080;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4502296 4502744 . - 2 ID=cds-WP_094187715.1-15;Parent=gene-IXO1104_RS21080;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS21080;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4503122 4503197 . - . ID=gene-IXO1104_RS21085;Name=IXO1104_RS21085;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21085;old_locus_tag=IXO1104_21035 NZ_CP047492.1 cmsearch ncRNA 4503122 4503197 . - . ID=rna-IXO1104_RS21085;Parent=gene-IXO1104_RS21085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21085;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4503122 4503197 . - . ID=exon-IXO1104_RS21085-1;Parent=rna-IXO1104_RS21085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21085;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 4503260 4503544 . + . ID=gene-IXO1104_RS21090;Name=IXO1104_RS21090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21090;old_locus_tag=IXO1104_21040;partial=true;pseudo=true;start_range=.,4503260 NZ_CP047492.1 Protein Homology CDS 4503260 4503544 . + 0 ID=cds-IXO1104_RS21090;Parent=gene-IXO1104_RS21090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159376.1;locus_tag=IXO1104_RS21090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4503260;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4503717 4504050 . + . ID=gene-IXO1104_RS21095;Name=IXO1104_RS21095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21095;old_locus_tag=IXO1104_21045;pseudo=true NZ_CP047492.1 Protein Homology CDS 4503717 4504050 . + 0 ID=cds-IXO1104_RS21095;Parent=gene-IXO1104_RS21095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348827.1;locus_tag=IXO1104_RS21095;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4504105 4504539 . - . ID=gene-IXO1104_RS21100;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21100;old_locus_tag=IXO1104_21050 NZ_CP047492.1 Protein Homology CDS 4504105 4504539 . - 0 ID=cds-WP_011260461.1;Parent=gene-IXO1104_RS21100;Dbxref=Genbank:WP_011260461.1;Name=WP_011260461.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501725.1;locus_tag=IXO1104_RS21100;product=inner membrane protein YiaA;protein_id=WP_011260461.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4504714 4505892 . + . ID=gene-IXO1104_RS21105;Name=IXO1104_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21105;old_locus_tag=IXO1104_21055 NZ_CP047492.1 Protein Homology CDS 4504714 4505892 . + 0 ID=cds-WP_012443997.1;Parent=gene-IXO1104_RS21105;Dbxref=Genbank:WP_012443997.1;Name=WP_012443997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484599.1;locus_tag=IXO1104_RS21105;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_012443997.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4506275 4506796 . + . ID=gene-IXO1104_RS21110;Name=IXO1104_RS21110;end_range=4506796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21110;old_locus_tag=IXO1104_21060;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4506275 4506796 . + 0 ID=cds-IXO1104_RS21110;Parent=gene-IXO1104_RS21110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4506796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408304.1;locus_tag=IXO1104_RS21110;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4506888 4507850 . + . ID=gene-IXO1104_RS21115;Name=IXO1104_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21115;old_locus_tag=IXO1104_21065 NZ_CP047492.1 Protein Homology CDS 4506888 4507850 . + 0 ID=cds-WP_164994160.1;Parent=gene-IXO1104_RS21115;Dbxref=Genbank:WP_164994160.1;Name=WP_164994160.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS21115;product=IS1595 family transposase;protein_id=WP_164994160.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4507868 4508413 . + . ID=gene-IXO1104_RS21120;Name=IXO1104_RS21120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21120;old_locus_tag=IXO1104_21070;partial=true;pseudo=true;start_range=.,4507868 NZ_CP047492.1 Protein Homology CDS 4507868 4508413 . + 0 ID=cds-IXO1104_RS21120;Parent=gene-IXO1104_RS21120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408304.1;locus_tag=IXO1104_RS21120;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,4507868;transl_table=11 NZ_CP047492.1 RefSeq gene 4508630 4509592 . + . ID=gene-IXO1104_RS21125;Name=IXO1104_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21125;old_locus_tag=IXO1104_21075 NZ_CP047492.1 Protein Homology CDS 4508630 4509592 . + 0 ID=cds-WP_044756364.1;Parent=gene-IXO1104_RS21125;Dbxref=Genbank:WP_044756364.1;Name=WP_044756364.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS21125;product=IS1595 family transposase;protein_id=WP_044756364.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4509670 4509993 . + . ID=gene-IXO1104_RS21130;Name=IXO1104_RS21130;end_range=4509993,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21130;old_locus_tag=IXO1104_21080;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4509670 4509993 . + 0 ID=cds-IXO1104_RS21130;Parent=gene-IXO1104_RS21130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4509993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS21130;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4510009 4511244 . - . ID=gene-IXO1104_RS21135;Name=IXO1104_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21135;old_locus_tag=IXO1104_21085 NZ_CP047492.1 Protein Homology CDS 4510009 4511244 . - 0 ID=cds-WP_044756360.1-4;Parent=gene-IXO1104_RS21135;Dbxref=Genbank:WP_044756360.1;Name=WP_044756360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS21135;product=ISL3 family transposase;protein_id=WP_044756360.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4511307 4511753 . + . ID=gene-IXO1104_RS21140;Name=IXO1104_RS21140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21140;old_locus_tag=IXO1104_21090;partial=true;pseudo=true;start_range=.,4511307 NZ_CP047492.1 Protein Homology CDS 4511307 4511753 . + 0 ID=cds-IXO1104_RS21140;Parent=gene-IXO1104_RS21140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1104_RS21140;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,4511307;transl_table=11 NZ_CP047492.1 RefSeq gene 4511760 4512725 . - . ID=gene-IXO1104_RS21145;Name=IXO1104_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21145;old_locus_tag=IXO1104_21095 NZ_CP047492.1 Protein Homology CDS 4511760 4512725 . - 0 ID=cds-WP_109181928.1-5;Parent=gene-IXO1104_RS21145;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS21145;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4512815 4513258 . + . ID=gene-IXO1104_RS21150;Name=IXO1104_RS21150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21150;old_locus_tag=IXO1104_21100;partial=true;pseudo=true;start_range=.,4512815 NZ_CP047492.1 Protein Homology CDS 4512815 4513258 . + 0 ID=cds-IXO1104_RS21150;Parent=gene-IXO1104_RS21150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS21150;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,4512815;transl_table=11 NZ_CP047492.1 RefSeq gene 4513388 4515559 . - . ID=gene-IXO1104_RS21155;Name=IXO1104_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21155;old_locus_tag=IXO1104_21105 NZ_CP047492.1 Protein Homology CDS 4513388 4515559 . - 0 ID=cds-WP_011260467.1;Parent=gene-IXO1104_RS21155;Dbxref=Genbank:WP_011260467.1;Name=WP_011260467.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305265.1;locus_tag=IXO1104_RS21155;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_011260467.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4515787 4516143 . - . ID=gene-IXO1104_RS21160;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=IXO1104_RS21160;old_locus_tag=IXO1104_21110 NZ_CP047492.1 Protein Homology CDS 4515787 4516143 . - 0 ID=cds-WP_011409563.1;Parent=gene-IXO1104_RS21160;Dbxref=Genbank:WP_011409563.1;Name=WP_011409563.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973559.1;locus_tag=IXO1104_RS21160;product=dihydroneopterin aldolase;protein_id=WP_011409563.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4516222 4517286 . - . ID=gene-IXO1104_RS21165;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS21165;old_locus_tag=IXO1104_21115 NZ_CP047492.1 Protein Homology CDS 4516222 4517286 . - 0 ID=cds-WP_011260469.1;Parent=gene-IXO1104_RS21165;Dbxref=Genbank:WP_011260469.1;Name=WP_011260469.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501720.1;locus_tag=IXO1104_RS21165;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_011260469.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4517566 4517781 . + . ID=gene-IXO1104_RS21170;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=IXO1104_RS21170;old_locus_tag=IXO1104_21120 NZ_CP047492.1 Protein Homology CDS 4517566 4517781 . + 0 ID=cds-WP_002808376.1;Parent=gene-IXO1104_RS21170;Dbxref=Genbank:WP_002808376.1;Name=WP_002808376.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=IXO1104_RS21170;product=30S ribosomal protein S21;protein_id=WP_002808376.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4518089 4518535 . + . ID=gene-IXO1104_RS21175;Name=IXO1104_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21175;old_locus_tag=IXO1104_21125 NZ_CP047492.1 Protein Homology CDS 4518089 4518535 . + 0 ID=cds-WP_011409564.1;Parent=gene-IXO1104_RS21175;Dbxref=Genbank:WP_011409564.1;Name=WP_011409564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1;locus_tag=IXO1104_RS21175;product=GatB/YqeY domain-containing protein;protein_id=WP_011409564.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4518876 4519247 . + . ID=gene-IXO1104_RS21180;Name=IXO1104_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21180 NZ_CP047492.1 GeneMarkS-2+ CDS 4518876 4519247 . + 0 ID=cds-WP_011409565.1;Parent=gene-IXO1104_RS21180;Dbxref=Genbank:WP_011409565.1;Name=WP_011409565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21180;product=hypothetical protein;protein_id=WP_011409565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4519303 4520066 . - . ID=gene-IXO1104_RS21185;Name=IXO1104_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21185;old_locus_tag=IXO1104_21130 NZ_CP047492.1 Protein Homology CDS 4519751 4520066 . - 0 ID=cds-WP_094187724.1;Parent=gene-IXO1104_RS21185;Dbxref=Genbank:WP_094187724.1;Name=WP_094187724.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS21185;product=IS5 family transposase;protein_id=WP_094187724.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4519303 4519751 . - 2 ID=cds-WP_094187724.1;Parent=gene-IXO1104_RS21185;Dbxref=Genbank:WP_094187724.1;Name=WP_094187724.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS21185;product=IS5 family transposase;protein_id=WP_094187724.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4520181 4520256 . + . ID=gene-IXO1104_RS21190;Name=IXO1104_RS21190;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21190;old_locus_tag=IXO1104_21135 NZ_CP047492.1 cmsearch ncRNA 4520181 4520256 . + . ID=rna-IXO1104_RS21190;Parent=gene-IXO1104_RS21190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21190;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4520181 4520256 . + . ID=exon-IXO1104_RS21190-1;Parent=rna-IXO1104_RS21190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21190;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4520829 4521791 . + . ID=gene-IXO1104_RS21195;Name=IXO1104_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21195;old_locus_tag=IXO1104_21140 NZ_CP047492.1 Protein Homology CDS 4520829 4521791 . + 0 ID=cds-WP_012443989.1;Parent=gene-IXO1104_RS21195;Dbxref=Genbank:WP_012443989.1;Name=WP_012443989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501718.1;locus_tag=IXO1104_RS21195;product=YihY/virulence factor BrkB family protein;protein_id=WP_012443989.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4521881 4523629 . + . ID=gene-IXO1104_RS21200;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=IXO1104_RS21200;old_locus_tag=IXO1104_21145 NZ_CP047492.1 Protein Homology CDS 4521881 4523629 . + 0 ID=cds-WP_011260472.1;Parent=gene-IXO1104_RS21200;Dbxref=Genbank:WP_011260472.1;Name=WP_011260472.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506325.1;locus_tag=IXO1104_RS21200;product=DNA primase;protein_id=WP_011260472.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4523881 4525200 . - . ID=gene-IXO1104_RS21205;Name=IXO1104_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21205;old_locus_tag=IXO1104_21150 NZ_CP047492.1 Protein Homology CDS 4523881 4525200 . - 0 ID=cds-WP_133264634.1;Parent=gene-IXO1104_RS21205;Dbxref=Genbank:WP_133264634.1;Name=WP_133264634.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS21205;product=IS701 family transposase;protein_id=WP_133264634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4525673 4525975 . + . ID=gene-IXO1104_RS21210;Name=IXO1104_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21210;old_locus_tag=IXO1104_21155 NZ_CP047492.1 Protein Homology CDS 4525673 4525975 . + 0 ID=cds-WP_229001940.1;Parent=gene-IXO1104_RS21210;Dbxref=Genbank:WP_229001940.1;Name=WP_229001940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157400.1;locus_tag=IXO1104_RS21210;product=YkgJ family cysteine cluster protein;protein_id=WP_229001940.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4525985 4526206 . + . ID=gene-IXO1104_RS21215;Name=IXO1104_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21215;old_locus_tag=IXO1104_21160 NZ_CP047492.1 Protein Homology CDS 4525985 4526206 . + 0 ID=cds-WP_011257535.1;Parent=gene-IXO1104_RS21215;Dbxref=Genbank:WP_011257535.1;Name=WP_011257535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365365.1;locus_tag=IXO1104_RS21215;product=hypothetical protein;protein_id=WP_011257535.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4526627 4526839 . - . ID=gene-IXO1104_RS21220;Name=IXO1104_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21220;old_locus_tag=IXO1104_21165 NZ_CP047492.1 Protein Homology CDS 4526627 4526839 . - 0 ID=cds-WP_011257534.1;Parent=gene-IXO1104_RS21220;Dbxref=Genbank:WP_011257534.1;Name=WP_011257534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577678.1;locus_tag=IXO1104_RS21220;product=hypothetical protein;protein_id=WP_011257534.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4527178 4527915 . + . ID=gene-IXO1104_RS21225;Name=IXO1104_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21225;old_locus_tag=IXO1104_21170 NZ_CP047492.1 Protein Homology CDS 4527178 4527915 . + 0 ID=cds-WP_012443985.1;Parent=gene-IXO1104_RS21225;Dbxref=Genbank:WP_012443985.1;Name=WP_012443985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301270.1;locus_tag=IXO1104_RS21225;product=DUF3348 domain-containing protein;protein_id=WP_012443985.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4527926 4530583 . + . ID=gene-IXO1104_RS21230;Name=IXO1104_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21230;old_locus_tag=IXO1104_21175 NZ_CP047492.1 Protein Homology CDS 4527926 4530583 . + 0 ID=cds-WP_075240619.1;Parent=gene-IXO1104_RS21230;Dbxref=Genbank:WP_075240619.1;Name=WP_075240619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407521.1;locus_tag=IXO1104_RS21230;product=DUF802 domain-containing protein;protein_id=WP_075240619.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4530580 4531254 . + . ID=gene-IXO1104_RS21235;Name=IXO1104_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21235;old_locus_tag=IXO1104_21180 NZ_CP047492.1 Protein Homology CDS 4530580 4531254 . + 0 ID=cds-WP_011257531.1;Parent=gene-IXO1104_RS21235;Dbxref=Genbank:WP_011257531.1;Name=WP_011257531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911315.1;locus_tag=IXO1104_RS21235;product=OmpA family protein;protein_id=WP_011257531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4531251 4531916 . + . ID=gene-IXO1104_RS21240;Name=IXO1104_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21240;old_locus_tag=IXO1104_21185 NZ_CP047492.1 Protein Homology CDS 4531251 4531916 . + 0 ID=cds-WP_011257530.1;Parent=gene-IXO1104_RS21240;Dbxref=Genbank:WP_011257530.1;Name=WP_011257530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257530.1;locus_tag=IXO1104_RS21240;product=DUF2894 domain-containing protein;protein_id=WP_011257530.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4532118 4533086 . - . ID=gene-IXO1104_RS21245;Name=IXO1104_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21245;old_locus_tag=IXO1104_21190 NZ_CP047492.1 Protein Homology CDS 4532118 4533086 . - 0 ID=cds-WP_011258802.1-17;Parent=gene-IXO1104_RS21245;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS21245;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4533161 4535302 . - . ID=gene-IXO1104_RS21250;Name=IXO1104_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21250;old_locus_tag=IXO1104_21195 NZ_CP047492.1 Protein Homology CDS 4533161 4535302 . - 0 ID=cds-WP_075240171.1;Parent=gene-IXO1104_RS21250;Dbxref=Genbank:WP_075240171.1;Name=WP_075240171.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379725.1;locus_tag=IXO1104_RS21250;product=TonB-dependent siderophore receptor;protein_id=WP_075240171.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4535392 4536660 . - . ID=gene-IXO1104_RS21255;Name=IXO1104_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21255;old_locus_tag=IXO1104_21200 NZ_CP047492.1 Protein Homology CDS 4535392 4536660 . - 0 ID=cds-WP_012443983.1;Parent=gene-IXO1104_RS21255;Dbxref=Genbank:WP_012443983.1;Name=WP_012443983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911318.1;locus_tag=IXO1104_RS21255;product=DUF3526 domain-containing protein;protein_id=WP_012443983.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4536660 4538096 . - . ID=gene-IXO1104_RS21260;Name=IXO1104_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21260;old_locus_tag=IXO1104_21205 NZ_CP047492.1 Protein Homology CDS 4536660 4538096 . - 0 ID=cds-WP_027703875.1;Parent=gene-IXO1104_RS21260;Dbxref=Genbank:WP_027703875.1;Name=WP_027703875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900947.1;locus_tag=IXO1104_RS21260;product=DUF3526 domain-containing protein;protein_id=WP_027703875.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4538107 4538829 . - . ID=gene-IXO1104_RS21265;Name=IXO1104_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21265;old_locus_tag=IXO1104_21210 NZ_CP047492.1 Protein Homology CDS 4538107 4538829 . - 0 ID=cds-WP_011407516.1;Parent=gene-IXO1104_RS21265;Dbxref=Genbank:WP_011407516.1;Name=WP_011407516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489275.1;locus_tag=IXO1104_RS21265;product=ABC transporter ATP-binding protein;protein_id=WP_011407516.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4539059 4539348 . - . ID=gene-IXO1104_RS21270;Name=IXO1104_RS21270;end_range=4539348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21270;old_locus_tag=IXO1104_21215;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4539059 4539348 . - 0 ID=cds-IXO1104_RS21270;Parent=gene-IXO1104_RS21270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4539348,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1104_RS21270;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4539444 4539980 . + . ID=gene-IXO1104_RS21275;Name=IXO1104_RS21275;end_range=4539980,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21275;old_locus_tag=IXO1104_21220;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4539444 4539980 . + 0 ID=cds-IXO1104_RS21275;Parent=gene-IXO1104_RS21275;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4539980,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS21275;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4540068 4541033 . + . ID=gene-IXO1104_RS21280;Name=IXO1104_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21280;old_locus_tag=IXO1104_21225 NZ_CP047492.1 Protein Homology CDS 4540068 4541033 . + 0 ID=cds-WP_109181928.1-6;Parent=gene-IXO1104_RS21280;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS21280;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4541069 4542025 . - . ID=gene-IXO1104_RS21285;Name=IXO1104_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21285;old_locus_tag=IXO1104_21230 NZ_CP047492.1 Protein Homology CDS 4541069 4542025 . - 0 ID=cds-WP_041182545.1-12;Parent=gene-IXO1104_RS21285;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS21285;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4542353 4543150 . - . ID=gene-IXO1104_RS21290;Name=IXO1104_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21290;old_locus_tag=IXO1104_21235 NZ_CP047492.1 Protein Homology CDS 4542353 4543150 . - 0 ID=cds-WP_011257518.1;Parent=gene-IXO1104_RS21290;Dbxref=Genbank:WP_011257518.1;Name=WP_011257518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535281.1;locus_tag=IXO1104_RS21290;product=hypothetical protein;protein_id=WP_011257518.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4543147 4544421 . - . ID=gene-IXO1104_RS21295;Name=IXO1104_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21295;old_locus_tag=IXO1104_21240 NZ_CP047492.1 Protein Homology CDS 4543147 4544421 . - 0 ID=cds-WP_041181951.1;Parent=gene-IXO1104_RS21295;Dbxref=Genbank:WP_041181951.1;Name=WP_041181951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=IXO1104_RS21295;product=DNA cytosine methyltransferase;protein_id=WP_041181951.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4544502 4544912 . - . ID=gene-IXO1104_RS21300;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=IXO1104_RS21300;old_locus_tag=IXO1104_21245 NZ_CP047492.1 Protein Homology CDS 4544502 4544912 . - 0 ID=cds-WP_011257516.1;Parent=gene-IXO1104_RS21300;Dbxref=Genbank:WP_011257516.1;Name=WP_011257516.1;Ontology_term=GO:0006298,GO:0004520;gbkey=CDS;gene=vsr;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257516.1;locus_tag=IXO1104_RS21300;product=DNA mismatch endonuclease Vsr;protein_id=WP_011257516.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4544905 4545576 . - . ID=gene-IXO1104_RS21305;Name=IXO1104_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21305;old_locus_tag=IXO1104_21250 NZ_CP047492.1 Protein Homology CDS 4544905 4545576 . - 0 ID=cds-WP_198912804.1;Parent=gene-IXO1104_RS21305;Dbxref=Genbank:WP_198912804.1;Name=WP_198912804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172588.1;locus_tag=IXO1104_RS21305;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_198912804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4546225 4546383 . - . ID=gene-IXO1104_RS21310;Name=IXO1104_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21310;old_locus_tag=IXO1104_21265 NZ_CP047492.1 Protein Homology CDS 4546225 4546383 . - 0 ID=cds-WP_011257515.1;Parent=gene-IXO1104_RS21310;Dbxref=Genbank:WP_011257515.1;Name=WP_011257515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257515.1;locus_tag=IXO1104_RS21310;product=hypothetical protein;protein_id=WP_011257515.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4546380 4546682 . - . ID=gene-IXO1104_RS21315;Name=IXO1104_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21315;old_locus_tag=IXO1104_21270 NZ_CP047492.1 Protein Homology CDS 4546380 4546682 . - 0 ID=cds-WP_041181950.1;Parent=gene-IXO1104_RS21315;Dbxref=Genbank:WP_041181950.1;Name=WP_041181950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158441.1;locus_tag=IXO1104_RS21315;product=hypothetical protein;protein_id=WP_041181950.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4546689 4547774 . - . ID=gene-IXO1104_RS21320;Name=IXO1104_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21320;old_locus_tag=IXO1104_21275 NZ_CP047492.1 Protein Homology CDS 4546689 4547774 . - 0 ID=cds-WP_044757144.1;Parent=gene-IXO1104_RS21320;Dbxref=Genbank:WP_044757144.1;Name=WP_044757144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173573.1;locus_tag=IXO1104_RS21320;product=type IV secretion system protein;protein_id=WP_044757144.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4547776 4548036 . - . ID=gene-IXO1104_RS21325;Name=IXO1104_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21325;old_locus_tag=IXO1104_21280 NZ_CP047492.1 Protein Homology CDS 4547776 4548036 . - 0 ID=cds-WP_044757145.1;Parent=gene-IXO1104_RS21325;Dbxref=Genbank:WP_044757145.1;Name=WP_044757145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015040067.1;locus_tag=IXO1104_RS21325;product=EexN family lipoprotein;protein_id=WP_044757145.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4548033 4548512 . - . ID=gene-IXO1104_RS21330;Name=IXO1104_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21330;old_locus_tag=IXO1104_21285 NZ_CP047492.1 Protein Homology CDS 4548033 4548512 . - 0 ID=cds-WP_044757146.1;Parent=gene-IXO1104_RS21330;Dbxref=Genbank:WP_044757146.1;Name=WP_044757146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173575.1;locus_tag=IXO1104_RS21330;product=hypothetical protein;protein_id=WP_044757146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4548526 4549245 . - . ID=gene-IXO1104_RS21335;Name=virB5;gbkey=Gene;gene=virB5;gene_biotype=protein_coding;locus_tag=IXO1104_RS21335;old_locus_tag=IXO1104_21290 NZ_CP047492.1 Protein Homology CDS 4548526 4549245 . - 0 ID=cds-WP_044757147.1;Parent=gene-IXO1104_RS21335;Dbxref=Genbank:WP_044757147.1;Name=WP_044757147.1;Ontology_term=GO:0043684;gbkey=CDS;gene=virB5;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015040069.1;locus_tag=IXO1104_RS21335;product=P-type DNA transfer protein VirB5;protein_id=WP_044757147.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4549572 4549922 . + . ID=gene-IXO1104_RS21340;Name=IXO1104_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21340 NZ_CP047492.1 GeneMarkS-2+ CDS 4549572 4549922 . + 0 ID=cds-WP_164994161.1;Parent=gene-IXO1104_RS21340;Dbxref=Genbank:WP_164994161.1;Name=WP_164994161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21340;product=hypothetical protein;protein_id=WP_164994161.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4549947 4551161 . + . ID=gene-IXO1104_RS21345;Name=IXO1104_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21345;old_locus_tag=IXO1104_21300 NZ_CP047492.1 Protein Homology CDS 4549947 4551161 . + 0 ID=cds-WP_164994107.1;Parent=gene-IXO1104_RS21345;Dbxref=Genbank:WP_164994107.1;Name=WP_164994107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS21345;product=IS4 family transposase;protein_id=WP_164994107.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4551237 4552076 . - . ID=gene-IXO1104_RS21350;Name=IXO1104_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21350;old_locus_tag=IXO1104_21305 NZ_CP047492.1 Protein Homology CDS 4551237 4552076 . - 0 ID=cds-WP_044757149.1;Parent=gene-IXO1104_RS21350;Dbxref=Genbank:WP_044757149.1;Name=WP_044757149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257508.1;locus_tag=IXO1104_RS21350;product=helix-turn-helix domain-containing protein;protein_id=WP_044757149.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4552073 4552312 . - . ID=gene-IXO1104_RS21355;Name=IXO1104_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21355;old_locus_tag=IXO1104_21310 NZ_CP047492.1 Protein Homology CDS 4552073 4552312 . - 0 ID=cds-WP_015040072.1;Parent=gene-IXO1104_RS21355;Dbxref=Genbank:WP_015040072.1;Name=WP_015040072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015040072.1;locus_tag=IXO1104_RS21355;product=Plasmid-related protein;protein_id=WP_015040072.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4552551 4553645 . - . ID=gene-IXO1104_RS21360;Name=IXO1104_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21360;old_locus_tag=IXO1104_21315 NZ_CP047492.1 Protein Homology CDS 4552551 4553645 . - 0 ID=cds-WP_041181948.1;Parent=gene-IXO1104_RS21360;Dbxref=Genbank:WP_041181948.1;Name=WP_041181948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=IXO1104_RS21360;product=site-specific integrase;protein_id=WP_041181948.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4553720 4553796 . - . ID=gene-IXO1104_RS21365;Name=IXO1104_RS21365;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS21365;old_locus_tag=IXO1104_21320 NZ_CP047492.1 tRNAscan-SE tRNA 4553720 4553796 . - . ID=rna-IXO1104_RS21365;Parent=gene-IXO1104_RS21365;anticodon=(pos:complement(4553760..4553762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21365;product=tRNA-Ile NZ_CP047492.1 tRNAscan-SE exon 4553720 4553796 . - . ID=exon-IXO1104_RS21365-1;Parent=rna-IXO1104_RS21365;anticodon=(pos:complement(4553760..4553762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21365;product=tRNA-Ile NZ_CP047492.1 RefSeq gene 4554025 4554243 . + . ID=gene-IXO1104_RS21370;Name=IXO1104_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21370 NZ_CP047492.1 GeneMarkS-2+ CDS 4554025 4554243 . + 0 ID=cds-WP_069960144.1;Parent=gene-IXO1104_RS21370;Dbxref=Genbank:WP_069960144.1;Name=WP_069960144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21370;product=hypothetical protein;protein_id=WP_069960144.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4554395 4554715 . - . ID=gene-IXO1104_RS21375;Name=IXO1104_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21375;old_locus_tag=IXO1104_21325 NZ_CP047492.1 Protein Homology CDS 4554395 4554715 . - 0 ID=cds-WP_011407506.1;Parent=gene-IXO1104_RS21375;Dbxref=Genbank:WP_011407506.1;Name=WP_011407506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157070.1;locus_tag=IXO1104_RS21375;product=hypothetical protein;protein_id=WP_011407506.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4554908 4556782 . - . ID=gene-IXO1104_RS21380;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=IXO1104_RS21380;old_locus_tag=IXO1104_21330 NZ_CP047492.1 Protein Homology CDS 4554908 4556782 . - 0 ID=cds-WP_011407505.1;Parent=gene-IXO1104_RS21380;Dbxref=Genbank:WP_011407505.1;Name=WP_011407505.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157069.1;locus_tag=IXO1104_RS21380;product=RNA polymerase sigma factor RpoD;protein_id=WP_011407505.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4556891 4557331 . - . ID=gene-IXO1104_RS21385;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=IXO1104_RS21385;old_locus_tag=IXO1104_21335 NZ_CP047492.1 Protein Homology CDS 4556891 4557331 . - 0 ID=cds-WP_011257505.1;Parent=gene-IXO1104_RS21385;Dbxref=Genbank:WP_011257505.1;Name=WP_011257505.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453176.1;locus_tag=IXO1104_RS21385;product=D-aminoacyl-tRNA deacylase;protein_id=WP_011257505.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4557330 4558346 . + . ID=gene-IXO1104_RS21390;Name=IXO1104_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21390;old_locus_tag=IXO1104_21340 NZ_CP047492.1 Protein Homology CDS 4557330 4558346 . + 0 ID=cds-WP_011257504.1;Parent=gene-IXO1104_RS21390;Dbxref=Genbank:WP_011257504.1;Name=WP_011257504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348771.1;locus_tag=IXO1104_RS21390;product=lauroyl acyltransferase;protein_id=WP_011257504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4558405 4558484 . - . ID=gene-IXO1104_RS21395;Name=IXO1104_RS21395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21395;old_locus_tag=IXO1104_21345 NZ_CP047492.1 cmsearch ncRNA 4558405 4558484 . - . ID=rna-IXO1104_RS21395;Parent=gene-IXO1104_RS21395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21395;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4558405 4558484 . - . ID=exon-IXO1104_RS21395-1;Parent=rna-IXO1104_RS21395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21395;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4558546 4559067 . - . ID=gene-IXO1104_RS21400;Name=IXO1104_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21400;old_locus_tag=IXO1104_21350 NZ_CP047492.1 Protein Homology CDS 4558546 4559067 . - 0 ID=cds-WP_011407503.1;Parent=gene-IXO1104_RS21400;Dbxref=Genbank:WP_011407503.1;Name=WP_011407503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484403.1;locus_tag=IXO1104_RS21400;product=GNAT family N-acetyltransferase;protein_id=WP_011407503.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4559310 4560443 . + . ID=gene-IXO1104_RS21405;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21405;old_locus_tag=IXO1104_21355 NZ_CP047492.1 Protein Homology CDS 4559310 4560443 . + 0 ID=cds-WP_011257502.1;Parent=gene-IXO1104_RS21405;Dbxref=Genbank:WP_011257502.1;Name=WP_011257502.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162247.1;locus_tag=IXO1104_RS21405;product=GTP cyclohydrolase II RibA;protein_id=WP_011257502.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4560553 4561062 . + . ID=gene-IXO1104_RS21410;Name=IXO1104_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21410;old_locus_tag=IXO1104_21360 NZ_CP047492.1 Protein Homology CDS 4560553 4561062 . + 0 ID=cds-WP_048488816.1;Parent=gene-IXO1104_RS21410;Dbxref=Genbank:WP_048488816.1;Name=WP_048488816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504874.1;locus_tag=IXO1104_RS21410;product=PH domain-containing protein;protein_id=WP_048488816.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4561059 4562564 . + . ID=gene-IXO1104_RS21415;Name=IXO1104_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21415;old_locus_tag=IXO1104_21365 NZ_CP047492.1 Protein Homology CDS 4561059 4562564 . + 0 ID=cds-WP_012443970.1;Parent=gene-IXO1104_RS21415;Dbxref=Genbank:WP_012443970.1;Name=WP_012443970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157062.1;locus_tag=IXO1104_RS21415;product=PH domain-containing protein;protein_id=WP_012443970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4562730 4563788 . - . ID=gene-IXO1104_RS21420;Name=IXO1104_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21420;old_locus_tag=IXO1104_21370 NZ_CP047492.1 Protein Homology CDS 4562730 4563788 . - 0 ID=cds-WP_103057628.1;Parent=gene-IXO1104_RS21420;Dbxref=Genbank:WP_103057628.1;Name=WP_103057628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157061.1;locus_tag=IXO1104_RS21420;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_103057628.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4563789 4564613 . + . ID=gene-IXO1104_RS21425;Name=IXO1104_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21425;old_locus_tag=IXO1104_21375 NZ_CP047492.1 Protein Homology CDS 4563789 4564613 . + 0 ID=cds-WP_011257498.1;Parent=gene-IXO1104_RS21425;Dbxref=Genbank:WP_011257498.1;Name=WP_011257498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115138.1;locus_tag=IXO1104_RS21425;product=glycosyltransferase family 2 protein;protein_id=WP_011257498.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4564811 4566088 . - . ID=gene-IXO1104_RS21430;Name=IXO1104_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21430;old_locus_tag=IXO1104_21380 NZ_CP047492.1 Protein Homology CDS 4564811 4566088 . - 0 ID=cds-WP_011257497.1;Parent=gene-IXO1104_RS21430;Dbxref=Genbank:WP_011257497.1;Name=WP_011257497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504878.1;locus_tag=IXO1104_RS21430;product=O-antigen ligase family protein;protein_id=WP_011257497.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4566253 4567974 . - . ID=gene-IXO1104_RS21435;Name=IXO1104_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21435;old_locus_tag=IXO1104_21385 NZ_CP047492.1 Protein Homology CDS 4566253 4567974 . - 0 ID=cds-WP_011257496.1;Parent=gene-IXO1104_RS21435;Dbxref=Genbank:WP_011257496.1;Name=WP_011257496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091215.1;locus_tag=IXO1104_RS21435;product=glycosyltransferase family 39 protein;protein_id=WP_011257496.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4568025 4569338 . - . ID=gene-IXO1104_RS21440;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS21440;old_locus_tag=IXO1104_21390 NZ_CP047492.1 Protein Homology CDS 4568025 4569338 . - 0 ID=cds-WP_011407500.1;Parent=gene-IXO1104_RS21440;Dbxref=Genbank:WP_011407500.1;Name=WP_011407500.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=IXO1104_RS21440;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_011407500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4569338 4570261 . - . ID=gene-IXO1104_RS21445;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=IXO1104_RS21445;old_locus_tag=IXO1104_21395 NZ_CP047492.1 Protein Homology CDS 4569338 4570261 . - 0 ID=cds-WP_011257494.1;Parent=gene-IXO1104_RS21445;Dbxref=Genbank:WP_011257494.1;Name=WP_011257494.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921922.1;locus_tag=IXO1104_RS21445;product=methionyl-tRNA formyltransferase;protein_id=WP_011257494.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4570655 4571167 . - . ID=gene-IXO1104_RS21450;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=IXO1104_RS21450;old_locus_tag=IXO1104_21400 NZ_CP047492.1 Protein Homology CDS 4570655 4571167 . - 0 ID=cds-WP_027703439.1;Parent=gene-IXO1104_RS21450;Dbxref=Genbank:WP_027703439.1;Name=WP_027703439.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911379.1;locus_tag=IXO1104_RS21450;product=peptide deformylase;protein_id=WP_027703439.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4571300 4572436 . + . ID=gene-IXO1104_RS21455;Name=IXO1104_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21455;old_locus_tag=IXO1104_21405 NZ_CP047492.1 Protein Homology CDS 4571300 4572436 . + 0 ID=cds-WP_011407499.1;Parent=gene-IXO1104_RS21455;Dbxref=Genbank:WP_011407499.1;Name=WP_011407499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927359.1;locus_tag=IXO1104_RS21455;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_011407499.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4572508 4573650 . + . ID=gene-IXO1104_RS21460;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21460;old_locus_tag=IXO1104_21410 NZ_CP047492.1 Protein Homology CDS 4572508 4573650 . + 0 ID=cds-WP_075240622.1;Parent=gene-IXO1104_RS21460;Dbxref=Genbank:WP_075240622.1;Name=WP_075240622.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091219.1;locus_tag=IXO1104_RS21460;product=DNA-processing protein DprA;protein_id=WP_075240622.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4573693 4574166 . + . ID=gene-IXO1104_RS21465;Name=IXO1104_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21465;old_locus_tag=IXO1104_21415 NZ_CP047492.1 Protein Homology CDS 4573693 4574166 . + 0 ID=cds-WP_011257490.1;Parent=gene-IXO1104_RS21465;Dbxref=Genbank:WP_011257490.1;Name=WP_011257490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159357.1;locus_tag=IXO1104_RS21465;product=DUF494 family protein;protein_id=WP_011257490.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4574207 4574929 . + . ID=gene-IXO1104_RS21470;Name=IXO1104_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21470;old_locus_tag=IXO1104_21420 NZ_CP047492.1 Protein Homology CDS 4574207 4574929 . + 0 ID=cds-WP_041181947.1;Parent=gene-IXO1104_RS21470;Dbxref=Genbank:WP_041181947.1;Name=WP_041181947.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348786.1;locus_tag=IXO1104_RS21470;product=pilin;protein_id=WP_041181947.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4574971 4576245 . + . ID=gene-IXO1104_RS21475;Name=IXO1104_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21475;old_locus_tag=IXO1104_21425 NZ_CP047492.1 Protein Homology CDS 4574971 4576245 . + 0 ID=cds-WP_011257488.1;Parent=gene-IXO1104_RS21475;Dbxref=Genbank:WP_011257488.1;Name=WP_011257488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112322.1;locus_tag=IXO1104_RS21475;product=RDD family protein;protein_id=WP_011257488.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4576428 4578920 . + . ID=gene-IXO1104_RS21480;Name=IXO1104_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21480;old_locus_tag=IXO1104_21430 NZ_CP047492.1 Protein Homology CDS 4576428 4578920 . + 0 ID=cds-WP_011257487.1;Parent=gene-IXO1104_RS21480;Dbxref=Genbank:WP_011257487.1;Name=WP_011257487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370069.1;locus_tag=IXO1104_RS21480;product=DNA topoisomerase I;protein_id=WP_011257487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4578931 4579494 . + . ID=gene-IXO1104_RS21485;Name=IXO1104_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21485;old_locus_tag=IXO1104_21435 NZ_CP047492.1 Protein Homology CDS 4578931 4579494 . + 0 ID=cds-WP_011257486.1;Parent=gene-IXO1104_RS21485;Dbxref=Genbank:WP_011257486.1;Name=WP_011257486.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921907.1;locus_tag=IXO1104_RS21485;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_011257486.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4579718 4580491 . + . ID=gene-IXO1104_RS21490;Name=IXO1104_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21490;old_locus_tag=IXO1104_21440 NZ_CP047492.1 Protein Homology CDS 4579718 4580491 . + 0 ID=cds-WP_011407497.1;Parent=gene-IXO1104_RS21490;Dbxref=Genbank:WP_011407497.1;Name=WP_011407497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572028.1;locus_tag=IXO1104_RS21490;product=hypothetical protein;protein_id=WP_011407497.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4580515 4581162 . + . ID=gene-IXO1104_RS21495;Name=IXO1104_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21495;old_locus_tag=IXO1104_21445 NZ_CP047492.1 Protein Homology CDS 4580515 4581162 . + 0 ID=cds-WP_171970790.1;Parent=gene-IXO1104_RS21495;Dbxref=Genbank:WP_171970790.1;Name=WP_171970790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157047.1;locus_tag=IXO1104_RS21495;product=DUF4124 domain-containing protein;protein_id=WP_171970790.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4581324 4582100 . - . ID=gene-IXO1104_RS21500;Name=IXO1104_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21500;old_locus_tag=IXO1104_21450 NZ_CP047492.1 Protein Homology CDS 4581324 4582100 . - 0 ID=cds-WP_011407495.1;Parent=gene-IXO1104_RS21500;Dbxref=Genbank:WP_011407495.1;Name=WP_011407495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1;locus_tag=IXO1104_RS21500;product=SDR family oxidoreductase;protein_id=WP_011407495.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4582207 4582422 . + . ID=gene-IXO1104_RS21505;Name=IXO1104_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21505;old_locus_tag=IXO1104_21455 NZ_CP047492.1 Protein Homology CDS 4582207 4582422 . + 0 ID=cds-WP_011257482.1;Parent=gene-IXO1104_RS21505;Dbxref=Genbank:WP_011257482.1;Name=WP_011257482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157045.1;locus_tag=IXO1104_RS21505;product=hypothetical protein;protein_id=WP_011257482.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4582608 4584509 . - . ID=gene-IXO1104_RS21510;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21510;old_locus_tag=IXO1104_21460 NZ_CP047492.1 Protein Homology CDS 4582608 4584509 . - 0 ID=cds-WP_041181946.1;Parent=gene-IXO1104_RS21510;Dbxref=Genbank:WP_041181946.1;Name=WP_041181946.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016021;gbkey=CDS;gene=sppA;go_component=integral component of membrane|0016021||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300058.1;locus_tag=IXO1104_RS21510;product=signal peptide peptidase SppA;protein_id=WP_041181946.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4584594 4585970 . - . ID=gene-IXO1104_RS21515;Name=IXO1104_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21515;old_locus_tag=IXO1104_21465 NZ_CP047492.1 Protein Homology CDS 4584594 4585970 . - 0 ID=cds-WP_041181945.1;Parent=gene-IXO1104_RS21515;Dbxref=Genbank:WP_041181945.1;Name=WP_041181945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091226.1;locus_tag=IXO1104_RS21515;product=MATE family efflux transporter;protein_id=WP_041181945.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4586251 4587324 . + . ID=gene-IXO1104_RS21520;Name=IXO1104_RS21520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21520;old_locus_tag=IXO1104_21470;pseudo=true NZ_CP047492.1 Protein Homology CDS 4586251 4587324 . + 0 ID=cds-IXO1104_RS21520;Parent=gene-IXO1104_RS21520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927326.1;locus_tag=IXO1104_RS21520;product=DUF3667 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4587655 4588257 . - . ID=gene-IXO1104_RS21525;Name=IXO1104_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21525;old_locus_tag=IXO1104_21475 NZ_CP047492.1 Protein Homology CDS 4587655 4588257 . - 0 ID=cds-WP_012443959.1;Parent=gene-IXO1104_RS21525;Dbxref=Genbank:WP_012443959.1;Name=WP_012443959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443959.1;locus_tag=IXO1104_RS21525;product=DUF3106 domain-containing protein;protein_id=WP_012443959.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4588241 4589266 . - . ID=gene-IXO1104_RS21530;Name=IXO1104_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21530;old_locus_tag=IXO1104_21480 NZ_CP047492.1 Protein Homology CDS 4588241 4589266 . - 0 ID=cds-WP_011257477.1;Parent=gene-IXO1104_RS21530;Dbxref=Genbank:WP_011257477.1;Name=WP_011257477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157040.1;locus_tag=IXO1104_RS21530;product=hypothetical protein;protein_id=WP_011257477.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4589732 4591954 . + . ID=gene-IXO1104_RS21535;Name=IXO1104_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21535;old_locus_tag=IXO1104_21485 NZ_CP047492.1 Protein Homology CDS 4589732 4591954 . + 0 ID=cds-WP_011257476.1;Parent=gene-IXO1104_RS21535;Dbxref=Genbank:WP_011257476.1;Name=WP_011257476.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1;locus_tag=IXO1104_RS21535;product=primosomal protein N';protein_id=WP_011257476.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4592357 4592872 . + . ID=gene-IXO1104_RS21540;Name=IXO1104_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21540;old_locus_tag=IXO1104_21490 NZ_CP047492.1 Protein Homology CDS 4592357 4592872 . + 0 ID=cds-WP_011257475.1;Parent=gene-IXO1104_RS21540;Dbxref=Genbank:WP_011257475.1;Name=WP_011257475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510657.1;locus_tag=IXO1104_RS21540;product=IS110 family transposase;protein_id=WP_011257475.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4592826 4593152 . - . ID=gene-IXO1104_RS21545;Name=IXO1104_RS21545;end_range=4593152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21545;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4592826 4593152 . - 0 ID=cds-IXO1104_RS21545;Parent=gene-IXO1104_RS21545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4593152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1104_RS21545;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4593146 4593331 . + . ID=gene-IXO1104_RS21550;Name=IXO1104_RS21550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21550;old_locus_tag=IXO1104_21500;partial=true;pseudo=true;start_range=.,4593146 NZ_CP047492.1 Protein Homology CDS 4593146 4593331 . + 0 ID=cds-IXO1104_RS21550;Parent=gene-IXO1104_RS21550;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161135.1;locus_tag=IXO1104_RS21550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4593146;transl_table=11 NZ_CP047492.1 RefSeq gene 4593402 4594721 . + . ID=gene-IXO1104_RS21555;Name=IXO1104_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21555;old_locus_tag=IXO1104_21505 NZ_CP047492.1 Protein Homology CDS 4593402 4594721 . + 0 ID=cds-WP_011407489.1-2;Parent=gene-IXO1104_RS21555;Dbxref=Genbank:WP_011407489.1;Name=WP_011407489.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS21555;product=IS701 family transposase;protein_id=WP_011407489.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4594813 4594888 . - . ID=gene-IXO1104_RS21560;Name=IXO1104_RS21560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21560;old_locus_tag=IXO1104_21510 NZ_CP047492.1 cmsearch ncRNA 4594813 4594888 . - . ID=rna-IXO1104_RS21560;Parent=gene-IXO1104_RS21560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21560;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4594813 4594888 . - . ID=exon-IXO1104_RS21560-1;Parent=rna-IXO1104_RS21560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21560;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4595189 4596154 . + . ID=gene-IXO1104_RS21565;Name=IXO1104_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21565;old_locus_tag=IXO1104_21515 NZ_CP047492.1 Protein Homology CDS 4595189 4596154 . + 0 ID=cds-WP_109181928.1-7;Parent=gene-IXO1104_RS21565;Dbxref=Genbank:WP_109181928.1;Name=WP_109181928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS21565;product=IS1595 family transposase;protein_id=WP_109181928.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4596339 4596671 . + . ID=gene-IXO1104_RS21570;Name=IXO1104_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21570;old_locus_tag=IXO1104_21520 NZ_CP047492.1 Protein Homology CDS 4596339 4596671 . + 0 ID=cds-WP_011407487.1;Parent=gene-IXO1104_RS21570;Dbxref=Genbank:WP_011407487.1;Name=WP_011407487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368153.1;locus_tag=IXO1104_RS21570;product=divalent-cation tolerance protein CutA;protein_id=WP_011407487.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4596677 4599001 . + . ID=gene-IXO1104_RS21575;Name=IXO1104_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21575;old_locus_tag=IXO1104_21525 NZ_CP047492.1 Protein Homology CDS 4596677 4599001 . + 0 ID=cds-WP_011407486.1;Parent=gene-IXO1104_RS21575;Dbxref=Genbank:WP_011407486.1;Name=WP_011407486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346209.1;locus_tag=IXO1104_RS21575;product=protein-disulfide reductase DsbD;protein_id=WP_011407486.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4599835 4600281 . + . ID=gene-IXO1104_RS21580;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=IXO1104_RS21580;old_locus_tag=IXO1104_21530 NZ_CP047492.1 Protein Homology CDS 4599835 4600281 . + 0 ID=cds-WP_011407485.1;Parent=gene-IXO1104_RS21580;Dbxref=Genbank:WP_011407485.1;Name=WP_011407485.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169658.1;locus_tag=IXO1104_RS21580;product=type II 3-dehydroquinate dehydratase;protein_id=WP_011407485.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4600380 4600865 . + . ID=gene-IXO1104_RS21585;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=IXO1104_RS21585;old_locus_tag=IXO1104_21535 NZ_CP047492.1 Protein Homology CDS 4600380 4600865 . + 0 ID=cds-WP_011257470.1;Parent=gene-IXO1104_RS21585;Dbxref=Genbank:WP_011257470.1;Name=WP_011257470.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155928.1;locus_tag=IXO1104_RS21585;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_011257470.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4600898 4601305 . + . ID=gene-IXO1104_RS21590;Name=IXO1104_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21590;old_locus_tag=IXO1104_21540 NZ_CP047492.1 Protein Homology CDS 4600898 4601305 . + 0 ID=cds-WP_075240182.1;Parent=gene-IXO1104_RS21590;Dbxref=Genbank:WP_075240182.1;Name=WP_075240182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407484.1;locus_tag=IXO1104_RS21590;product=four helix bundle protein;protein_id=WP_075240182.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4601341 4602708 . + . ID=gene-IXO1104_RS21595;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=IXO1104_RS21595;old_locus_tag=IXO1104_21545 NZ_CP047492.1 Protein Homology CDS 4601341 4602708 . + 0 ID=cds-WP_010368143.1;Parent=gene-IXO1104_RS21595;Dbxref=Genbank:WP_010368143.1;Name=WP_010368143.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660825.1;locus_tag=IXO1104_RS21595;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_010368143.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4602847 4603212 . - . ID=gene-IXO1104_RS21600;Name=IXO1104_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21600;old_locus_tag=IXO1104_21550 NZ_CP047492.1 Protein Homology CDS 4602847 4603212 . - 0 ID=cds-WP_011257468.1;Parent=gene-IXO1104_RS21600;Dbxref=Genbank:WP_011257468.1;Name=WP_011257468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257468.1;locus_tag=IXO1104_RS21600;product=hypothetical protein;protein_id=WP_011257468.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4603209 4604134 . - . ID=gene-IXO1104_RS21605;Name=IXO1104_RS21605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21605;pseudo=true NZ_CP047492.1 Protein Homology CDS 4603209 4604134 . - 0 ID=cds-IXO1104_RS21605;Parent=gene-IXO1104_RS21605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301597.1;locus_tag=IXO1104_RS21605;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4605080 4606021 . + . ID=gene-IXO1104_RS21610;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21610;old_locus_tag=IXO1104_21565 NZ_CP047492.1 Protein Homology CDS 4605080 4606021 . + 0 ID=cds-WP_011257466.1;Parent=gene-IXO1104_RS21610;Dbxref=Genbank:WP_011257466.1;Name=WP_011257466.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257466.1;locus_tag=IXO1104_RS21610;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_011257466.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4606016 4606090 . - . ID=gene-IXO1104_RS21615;Name=IXO1104_RS21615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21615;old_locus_tag=IXO1104_21570 NZ_CP047492.1 cmsearch ncRNA 4606016 4606090 . - . ID=rna-IXO1104_RS21615;Parent=gene-IXO1104_RS21615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21615;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4606016 4606090 . - . ID=exon-IXO1104_RS21615-1;Parent=rna-IXO1104_RS21615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21615;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4606168 4606683 . - . ID=gene-IXO1104_RS21620;Name=IXO1104_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21620;old_locus_tag=IXO1104_21575 NZ_CP047492.1 Protein Homology CDS 4606168 4606683 . - 0 ID=cds-WP_027703754.1;Parent=gene-IXO1104_RS21620;Dbxref=Genbank:WP_027703754.1;Name=WP_027703754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571864.1;locus_tag=IXO1104_RS21620;product=hypothetical protein;protein_id=WP_027703754.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4606827 4607204 . + . ID=gene-IXO1104_RS21625;Name=IXO1104_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21625;old_locus_tag=IXO1104_21580 NZ_CP047492.1 Protein Homology CDS 4606827 4607204 . + 0 ID=cds-WP_011257464.1;Parent=gene-IXO1104_RS21625;Dbxref=Genbank:WP_011257464.1;Name=WP_011257464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997552.1;locus_tag=IXO1104_RS21625;product=helix-turn-helix domain-containing protein;protein_id=WP_011257464.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4607528 4608760 . + . ID=gene-IXO1104_RS21630;Name=IXO1104_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21630;old_locus_tag=IXO1104_21585 NZ_CP047492.1 Protein Homology CDS 4607528 4608760 . + 0 ID=cds-WP_011257463.1;Parent=gene-IXO1104_RS21630;Dbxref=Genbank:WP_011257463.1;Name=WP_011257463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920136.1;locus_tag=IXO1104_RS21630;product=DUF3426 domain-containing protein;protein_id=WP_011257463.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4608867 4609139 . + . ID=gene-IXO1104_RS21635;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=IXO1104_RS21635;old_locus_tag=IXO1104_21590 NZ_CP047492.1 Protein Homology CDS 4608867 4609139 . + 0 ID=cds-WP_011257462.1;Parent=gene-IXO1104_RS21635;Dbxref=Genbank:WP_011257462.1;Name=WP_011257462.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920134.1;locus_tag=IXO1104_RS21635;product=DNA-binding transcriptional regulator Fis;protein_id=WP_011257462.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4609544 4609735 . + . ID=gene-IXO1104_RS21640;Name=IXO1104_RS21640;end_range=4609735,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21640;old_locus_tag=IXO1104_21595;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4609544 4609735 . + 0 ID=cds-IXO1104_RS21640;Parent=gene-IXO1104_RS21640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4609735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS21640;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4609824 4610789 . + . ID=gene-IXO1104_RS21645;Name=IXO1104_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21645;old_locus_tag=IXO1104_21600 NZ_CP047492.1 Protein Homology CDS 4609824 4610789 . + 0 ID=cds-WP_151421348.1;Parent=gene-IXO1104_RS21645;Dbxref=Genbank:WP_151421348.1;Name=WP_151421348.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS21645;product=IS1595 family transposase;protein_id=WP_151421348.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4610786 4610980 . - . ID=gene-IXO1104_RS21650;Name=IXO1104_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21650;old_locus_tag=IXO1104_21605 NZ_CP047492.1 GeneMarkS-2+ CDS 4610786 4610980 . - 0 ID=cds-WP_012446211.1;Parent=gene-IXO1104_RS21650;Dbxref=Genbank:WP_012446211.1;Name=WP_012446211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21650;product=hypothetical protein;protein_id=WP_012446211.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4611050 4612006 . - . ID=gene-IXO1104_RS21655;Name=IXO1104_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21655;old_locus_tag=IXO1104_21610 NZ_CP047492.1 Protein Homology CDS 4611050 4612006 . - 0 ID=cds-WP_011407237.1-13;Parent=gene-IXO1104_RS21655;Dbxref=Genbank:WP_011407237.1;Name=WP_011407237.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1104_RS21655;product=IS30-like element IS1112a family transposase;protein_id=WP_011407237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4612081 4614711 . - . ID=gene-IXO1104_RS21660;Name=IXO1104_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21660;old_locus_tag=IXO1104_21615 NZ_CP047492.1 Protein Homology CDS 4612081 4614711 . - 0 ID=cds-WP_241846855.1;Parent=gene-IXO1104_RS21660;Dbxref=Genbank:WP_241846855.1;Name=WP_241846855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=IXO1104_RS21660;product=hemagglutinin repeat-containing protein;protein_id=WP_241846855.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4614841 4615245 . - . ID=gene-IXO1104_RS21665;Name=IXO1104_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21665;old_locus_tag=IXO1104_21620 NZ_CP047492.1 GeneMarkS-2+ CDS 4614841 4615245 . - 0 ID=cds-WP_075240682.1;Parent=gene-IXO1104_RS21665;Dbxref=Genbank:WP_075240682.1;Name=WP_075240682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21665;product=hypothetical protein;protein_id=WP_075240682.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4615242 4617761 . - . ID=gene-IXO1104_RS21670;Name=IXO1104_RS21670;end_range=4617761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21670;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4615242 4617761 . - 0 ID=cds-IXO1104_RS21670;Parent=gene-IXO1104_RS21670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4617761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446229.1;locus_tag=IXO1104_RS21670;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4617797 4618201 . - . ID=gene-IXO1104_RS21675;Name=IXO1104_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21675;old_locus_tag=IXO1104_21630 NZ_CP047492.1 GeneMarkS-2+ CDS 4617797 4618201 . - 0 ID=cds-WP_143698779.1;Parent=gene-IXO1104_RS21675;Dbxref=Genbank:WP_143698779.1;Name=WP_143698779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21675;product=hypothetical protein;protein_id=WP_143698779.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4618204 4622046 . - . ID=gene-IXO1104_RS21680;Name=IXO1104_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21680;old_locus_tag=IXO1104_21635 NZ_CP047492.1 Protein Homology CDS 4618204 4622046 . - 0 ID=cds-WP_241846819.1;Parent=gene-IXO1104_RS21680;Dbxref=Genbank:WP_241846819.1;Name=WP_241846819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446229.1;locus_tag=IXO1104_RS21680;product=hemagglutinin repeat-containing protein;protein_id=WP_241846819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4622108 4622269 . + . ID=gene-IXO1104_RS21685;Name=IXO1104_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21685 NZ_CP047492.1 GeneMarkS-2+ CDS 4622108 4622269 . + 0 ID=cds-WP_241846820.1;Parent=gene-IXO1104_RS21685;Dbxref=Genbank:WP_241846820.1;Name=WP_241846820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21685;product=hypothetical protein;protein_id=WP_241846820.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4622513 4622719 . + . ID=gene-IXO1104_RS21690;Name=IXO1104_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21690 NZ_CP047492.1 GeneMarkS-2+ CDS 4622513 4622719 . + 0 ID=cds-WP_241846821.1;Parent=gene-IXO1104_RS21690;Dbxref=Genbank:WP_241846821.1;Name=WP_241846821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21690;product=hypothetical protein;protein_id=WP_241846821.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4623104 4623355 . + . ID=gene-IXO1104_RS21695;Name=IXO1104_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21695;old_locus_tag=IXO1104_21645 NZ_CP047492.1 Protein Homology CDS 4623104 4623355 . + 0 ID=cds-WP_075239879.1;Parent=gene-IXO1104_RS21695;Dbxref=Genbank:WP_075239879.1;Name=WP_075239879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303428.1;locus_tag=IXO1104_RS21695;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_075239879.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4623675 4624334 . + . ID=gene-IXO1104_RS21700;Name=IXO1104_RS21700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21700;old_locus_tag=IXO1104_21655;partial=true;pseudo=true;start_range=.,4623675 NZ_CP047492.1 Protein Homology CDS 4623675 4624334 . + 0 ID=cds-IXO1104_RS21700;Parent=gene-IXO1104_RS21700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS21700;partial=true;product=IS30-like element IS1112b family transposase;pseudo=true;start_range=.,4623675;transl_table=11 NZ_CP047492.1 RefSeq gene 4624325 4630174 . - . ID=gene-IXO1104_RS21705;Name=IXO1104_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21705;old_locus_tag=IXO1104_21660 NZ_CP047492.1 Protein Homology CDS 4624325 4630174 . - 0 ID=cds-WP_241846822.1;Parent=gene-IXO1104_RS21705;Dbxref=Genbank:WP_241846822.1;Name=WP_241846822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504817.1;locus_tag=IXO1104_RS21705;product=hemagglutinin repeat-containing protein;protein_id=WP_241846822.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4630503 4630868 . + . ID=gene-IXO1104_RS21710;Name=IXO1104_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21710;old_locus_tag=IXO1104_21670 NZ_CP047492.1 Protein Homology CDS 4630503 4630868 . + 0 ID=cds-WP_241846823.1;Parent=gene-IXO1104_RS21710;Dbxref=Genbank:WP_241846823.1;Name=WP_241846823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407242.1;locus_tag=IXO1104_RS21710;product=SymE family type I addiction module toxin;protein_id=WP_241846823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4630998 4631384 . - . ID=gene-IXO1104_RS21715;Name=IXO1104_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21715;old_locus_tag=IXO1104_21675 NZ_CP047492.1 GeneMarkS-2+ CDS 4630998 4631384 . - 0 ID=cds-WP_133264755.1;Parent=gene-IXO1104_RS21715;Dbxref=Genbank:WP_133264755.1;Name=WP_133264755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21715;product=hypothetical protein;protein_id=WP_133264755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4631418 4634882 . - . ID=gene-IXO1104_RS21720;Name=IXO1104_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21720;old_locus_tag=IXO1104_21680 NZ_CP047492.1 Protein Homology CDS 4631418 4634882 . - 0 ID=cds-WP_075244762.1;Parent=gene-IXO1104_RS21720;Dbxref=Genbank:WP_075244762.1;Name=WP_075244762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922617.1;locus_tag=IXO1104_RS21720;product=hemagglutinin repeat-containing protein;protein_id=WP_075244762.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4635133 4635513 . + . ID=gene-IXO1104_RS21725;Name=IXO1104_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21725;old_locus_tag=IXO1104_21690 NZ_CP047492.1 Protein Homology CDS 4635133 4635513 . + 0 ID=cds-WP_164994162.1;Parent=gene-IXO1104_RS21725;Dbxref=Genbank:WP_164994162.1;Name=WP_164994162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407242.1;locus_tag=IXO1104_RS21725;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_164994162.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4635552 4635962 . - . ID=gene-IXO1104_RS21730;Name=IXO1104_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21730;old_locus_tag=IXO1104_21695 NZ_CP047492.1 GeneMarkS-2+ CDS 4635552 4635962 . - 0 ID=cds-WP_133264756.1;Parent=gene-IXO1104_RS21730;Dbxref=Genbank:WP_133264756.1;Name=WP_133264756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS21730;product=hypothetical protein;protein_id=WP_133264756.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4635967 4646697 . - . ID=gene-IXO1104_RS21735;Name=IXO1104_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21735;old_locus_tag=IXO1104_21700 NZ_CP047492.1 Protein Homology CDS 4635967 4646697 . - 0 ID=cds-WP_164994163.1;Parent=gene-IXO1104_RS21735;Dbxref=Genbank:WP_164994163.1;Name=WP_164994163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446229.1;locus_tag=IXO1104_RS21735;product=hemagglutinin repeat-containing protein;protein_id=WP_164994163.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4646719 4648461 . - . ID=gene-IXO1104_RS21740;Name=IXO1104_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21740;old_locus_tag=IXO1104_21705 NZ_CP047492.1 Protein Homology CDS 4646719 4648461 . - 0 ID=cds-WP_075240695.1;Parent=gene-IXO1104_RS21740;Dbxref=Genbank:WP_075240695.1;Name=WP_075240695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116046.1;locus_tag=IXO1104_RS21740;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_075240695.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4648698 4650017 . + . ID=gene-IXO1104_RS21745;Name=IXO1104_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21745;old_locus_tag=IXO1104_21710 NZ_CP047492.1 Protein Homology CDS 4648698 4650017 . + 0 ID=cds-WP_263117739.1;Parent=gene-IXO1104_RS21745;Dbxref=Genbank:WP_263117739.1;Name=WP_263117739.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS21745;product=IS701 family transposase;protein_id=WP_263117739.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4650108 4650184 . - . ID=gene-IXO1104_RS21750;Name=IXO1104_RS21750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS21750;old_locus_tag=IXO1104_21715 NZ_CP047492.1 cmsearch ncRNA 4650108 4650184 . - . ID=rna-IXO1104_RS21750;Parent=gene-IXO1104_RS21750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21750;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4650108 4650184 . - . ID=exon-IXO1104_RS21750-1;Parent=rna-IXO1104_RS21750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21750;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 4650247 4651065 . - . ID=gene-IXO1104_RS21755;Name=IXO1104_RS21755;end_range=4651065,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21755;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4650247 4651065 . - 0 ID=cds-IXO1104_RS21755;Parent=gene-IXO1104_RS21755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4651065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437217.1;locus_tag=IXO1104_RS21755;partial=true;product=ice nucleation protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4651175 4652140 . + . ID=gene-IXO1104_RS21760;Name=IXO1104_RS21760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21760;old_locus_tag=IXO1104_21725;pseudo=true NZ_CP047492.1 Protein Homology CDS 4651175 4652140 . + 0 ID=cds-IXO1104_RS21760;Parent=gene-IXO1104_RS21760;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS21760;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4652146 4652535 . - . ID=gene-IXO1104_RS21765;Name=IXO1104_RS21765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21765;old_locus_tag=IXO1104_21730;partial=true;pseudo=true;start_range=.,4652146 NZ_CP047492.1 Protein Homology CDS 4652146 4652535 . - 0 ID=cds-IXO1104_RS21765;Parent=gene-IXO1104_RS21765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155940.1;locus_tag=IXO1104_RS21765;partial=true;product=serine/threonine protein phosphatase;pseudo=true;start_range=.,4652146;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4652532 4654220 . - . ID=gene-IXO1104_RS21770;Name=IXO1104_RS21770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21770;pseudo=true NZ_CP047492.1 Protein Homology CDS 4652532 4654220 . - 0 ID=cds-IXO1104_RS21770;Parent=gene-IXO1104_RS21770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920129.1;locus_tag=IXO1104_RS21770;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4654378 4654996 . - . ID=gene-IXO1104_RS21775;Name=IXO1104_RS21775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21775;old_locus_tag=IXO1104_21750;pseudo=true NZ_CP047492.1 Protein Homology CDS 4654378 4654996 . - 0 ID=cds-IXO1104_RS21775;Parent=gene-IXO1104_RS21775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967899.1;locus_tag=IXO1104_RS21775;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4655070 4656653 . + . ID=gene-IXO1104_RS21780;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=IXO1104_RS21780;old_locus_tag=IXO1104_21755 NZ_CP047492.1 Protein Homology CDS 4655070 4656653 . + 0 ID=cds-WP_011257456.1;Parent=gene-IXO1104_RS21780;Dbxref=Genbank:WP_011257456.1;Name=WP_011257456.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302295.1;locus_tag=IXO1104_RS21780;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_011257456.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4656703 4657938 . + . ID=gene-IXO1104_RS21785;Name=IXO1104_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21785;old_locus_tag=IXO1104_21760 NZ_CP047492.1 Protein Homology CDS 4656703 4657938 . + 0 ID=cds-WP_075240634.1;Parent=gene-IXO1104_RS21785;Dbxref=Genbank:WP_075240634.1;Name=WP_075240634.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257455.1;locus_tag=IXO1104_RS21785;product=AAA family ATPase;protein_id=WP_075240634.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4657938 4658552 . + . ID=gene-IXO1104_RS21790;Name=IXO1104_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21790;old_locus_tag=IXO1104_21765 NZ_CP047492.1 Protein Homology CDS 4657938 4658552 . + 0 ID=cds-WP_011407473.1;Parent=gene-IXO1104_RS21790;Dbxref=Genbank:WP_011407473.1;Name=WP_011407473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379465.1;locus_tag=IXO1104_RS21790;product=DUF4276 family protein;protein_id=WP_011407473.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4658573 4659862 . + . ID=gene-IXO1104_RS21795;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=IXO1104_RS21795;old_locus_tag=IXO1104_21770 NZ_CP047492.1 Protein Homology CDS 4658573 4659862 . + 0 ID=cds-WP_069965014.1;Parent=gene-IXO1104_RS21795;Dbxref=Genbank:WP_069965014.1;Name=WP_069965014.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257454.1;locus_tag=IXO1104_RS21795;product=phosphoribosylamine--glycine ligase;protein_id=WP_069965014.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4660015 4660617 . + . ID=gene-IXO1104_RS21800;Name=IXO1104_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21800;old_locus_tag=IXO1104_21775 NZ_CP047492.1 Protein Homology CDS 4660015 4660617 . + 0 ID=cds-WP_241846824.1;Parent=gene-IXO1104_RS21800;Dbxref=Genbank:WP_241846824.1;Name=WP_241846824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=IXO1104_RS21800;product=AAA family ATPase;protein_id=WP_241846824.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4660608 4661564 . - . ID=gene-IXO1104_RS21805;Name=IXO1104_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21805;old_locus_tag=IXO1104_21780 NZ_CP047492.1 Protein Homology CDS 4660608 4661564 . - 0 ID=cds-WP_041182545.1-13;Parent=gene-IXO1104_RS21805;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS21805;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4661645 4661989 . + . ID=gene-IXO1104_RS21810;Name=IXO1104_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21810;old_locus_tag=IXO1104_21785 NZ_CP047492.1 Protein Homology CDS 4661645 4661989 . + 0 ID=cds-WP_080493540.1;Parent=gene-IXO1104_RS21810;Dbxref=Genbank:WP_080493540.1;Name=WP_080493540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025468.2;locus_tag=IXO1104_RS21810;product=DUF4276 family protein;protein_id=WP_080493540.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4662215 4664428 . + . ID=gene-IXO1104_RS21815;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=IXO1104_RS21815;old_locus_tag=IXO1104_21790 NZ_CP047492.1 Protein Homology CDS 4662215 4664428 . + 0 ID=cds-WP_075240025.1;Parent=gene-IXO1104_RS21815;Dbxref=Genbank:WP_075240025.1;Name=WP_075240025.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155946.1;locus_tag=IXO1104_RS21815;product=YccS family putative transporter;protein_id=WP_075240025.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4664559 4665748 . - . ID=gene-IXO1104_RS21820;Name=IXO1104_RS21820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21820;old_locus_tag=IXO1104_21795;pseudo=true NZ_CP047492.1 Protein Homology CDS 4664559 4665748 . - 0 ID=cds-IXO1104_RS21820;Parent=gene-IXO1104_RS21820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155947.1;locus_tag=IXO1104_RS21820;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4665846 4666719 . + . ID=gene-IXO1104_RS21825;Name=IXO1104_RS21825;end_range=4666719,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21825;old_locus_tag=IXO1104_21800;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4665846 4666719 . + 0 ID=cds-IXO1104_RS21825;Parent=gene-IXO1104_RS21825;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4666719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155948.1;locus_tag=IXO1104_RS21825;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4666820 4668742 . + . ID=gene-IXO1104_RS21830;Name=IXO1104_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21830;old_locus_tag=IXO1104_21805 NZ_CP047492.1 Protein Homology CDS 4666820 4668742 . + 0 ID=cds-WP_011257451.1;Parent=gene-IXO1104_RS21830;Dbxref=Genbank:WP_011257451.1;Name=WP_011257451.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504924.1;locus_tag=IXO1104_RS21830;product=MFS transporter;protein_id=WP_011257451.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4669203 4669583 . + . ID=gene-IXO1104_RS21835;Name=IXO1104_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21835;old_locus_tag=IXO1104_21810 NZ_CP047492.1 Protein Homology CDS 4669203 4669583 . + 0 ID=cds-WP_011257450.1;Parent=gene-IXO1104_RS21835;Dbxref=Genbank:WP_011257450.1;Name=WP_011257450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257450.1;locus_tag=IXO1104_RS21835;product=CD225/dispanin family protein;protein_id=WP_011257450.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4669586 4669993 . + . ID=gene-IXO1104_RS21840;Name=IXO1104_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21840;old_locus_tag=IXO1104_21815 NZ_CP047492.1 Protein Homology CDS 4669586 4669993 . + 0 ID=cds-WP_011407466.1;Parent=gene-IXO1104_RS21840;Dbxref=Genbank:WP_011407466.1;Name=WP_011407466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534084.1;locus_tag=IXO1104_RS21840;product=DUF2752 domain-containing protein;protein_id=WP_011407466.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4670315 4671205 . - . ID=gene-IXO1104_RS21845;Name=IXO1104_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21845;old_locus_tag=IXO1104_21820 NZ_CP047492.1 Protein Homology CDS 4670315 4671205 . - 0 ID=cds-WP_011257449.1;Parent=gene-IXO1104_RS21845;Dbxref=Genbank:WP_011257449.1;Name=WP_011257449.1;Ontology_term=GO:0009236,GO:0048472,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768466.1;locus_tag=IXO1104_RS21845;product=cobalamin biosynthesis protein;protein_id=WP_011257449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4671279 4672169 . - . ID=gene-IXO1104_RS21850;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=IXO1104_RS21850;old_locus_tag=IXO1104_21825 NZ_CP047492.1 Protein Homology CDS 4671279 4672169 . - 0 ID=cds-WP_011257448.1;Parent=gene-IXO1104_RS21850;Dbxref=Genbank:WP_011257448.1;Name=WP_011257448.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914180.1;locus_tag=IXO1104_RS21850;product=NAD(+) diphosphatase;protein_id=WP_011257448.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4672476 4673756 . - . ID=gene-IXO1104_RS21855;Name=IXO1104_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21855;old_locus_tag=IXO1104_21830 NZ_CP047492.1 Protein Homology CDS 4672476 4673756 . - 0 ID=cds-WP_011407465.1;Parent=gene-IXO1104_RS21855;Dbxref=Genbank:WP_011407465.1;Name=WP_011407465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914181.1;locus_tag=IXO1104_RS21855;product=lipase;protein_id=WP_011407465.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4674683 4675069 . - . ID=gene-IXO1104_RS21860;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS21860;old_locus_tag=IXO1104_21835 NZ_CP047492.1 Protein Homology CDS 4674683 4675069 . - 0 ID=cds-WP_011407463.1;Parent=gene-IXO1104_RS21860;Dbxref=Genbank:WP_011407463.1;Name=WP_011407463.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1;locus_tag=IXO1104_RS21860;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_011407463.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4675142 4675591 . - . ID=gene-IXO1104_RS21865;Name=IXO1104_RS21865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS21865;old_locus_tag=IXO1104_21840;pseudo=true NZ_CP047492.1 Protein Homology CDS 4675142 4675591 . - 0 ID=cds-IXO1104_RS21865;Parent=gene-IXO1104_RS21865;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379445.1;locus_tag=IXO1104_RS21865;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4675595 4676365 . - . ID=gene-IXO1104_RS21870;Name=IXO1104_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21870;old_locus_tag=IXO1104_21845 NZ_CP047492.1 Protein Homology CDS 4675595 4676365 . - 0 ID=cds-WP_012446244.1;Parent=gene-IXO1104_RS21870;Dbxref=Genbank:WP_012446244.1;Name=WP_012446244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574003.1;locus_tag=IXO1104_RS21870;product=hypothetical protein;protein_id=WP_012446244.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4676473 4677099 . + . ID=gene-IXO1104_RS21875;Name=IXO1104_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21875;old_locus_tag=IXO1104_21850 NZ_CP047492.1 Protein Homology CDS 4676473 4677099 . + 0 ID=cds-WP_011407461.1;Parent=gene-IXO1104_RS21875;Dbxref=Genbank:WP_011407461.1;Name=WP_011407461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808223.1;locus_tag=IXO1104_RS21875;product=DUF4126 domain-containing protein;protein_id=WP_011407461.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4677138 4679108 . + . ID=gene-IXO1104_RS21880;Name=IXO1104_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21880;old_locus_tag=IXO1104_21855 NZ_CP047492.1 Protein Homology CDS 4677138 4679108 . + 0 ID=cds-WP_012446246.1;Parent=gene-IXO1104_RS21880;Dbxref=Genbank:WP_012446246.1;Name=WP_012446246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462808.1;locus_tag=IXO1104_RS21880;product=EAL domain-containing response regulator;protein_id=WP_012446246.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4679109 4681418 . + . ID=gene-IXO1104_RS21885;Name=IXO1104_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21885;old_locus_tag=IXO1104_21860 NZ_CP047492.1 Protein Homology CDS 4679109 4681418 . + 0 ID=cds-WP_011257440.1;Parent=gene-IXO1104_RS21885;Dbxref=Genbank:WP_011257440.1;Name=WP_011257440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368087.1;locus_tag=IXO1104_RS21885;product=ATP-binding protein;protein_id=WP_011257440.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4681973 4683015 . + . ID=gene-IXO1104_RS21890;Name=IXO1104_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21890;old_locus_tag=IXO1104_21865 NZ_CP047492.1 Protein Homology CDS 4681973 4682168 . + 0 ID=cds-WP_241846856.1;Parent=gene-IXO1104_RS21890;Dbxref=Genbank:WP_241846856.1;Name=WP_241846856.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS21890;product=IS3 family transposase;protein_id=WP_241846856.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4682168 4683015 . + 2 ID=cds-WP_241846856.1;Parent=gene-IXO1104_RS21890;Dbxref=Genbank:WP_241846856.1;Name=WP_241846856.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS21890;product=IS3 family transposase;protein_id=WP_241846856.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4683112 4683226 . - . ID=gene-IXO1104_RS21895;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IXO1104_RS21895;old_locus_tag=IXO1104_21870 NZ_CP047492.1 cmsearch rRNA 4683112 4683226 . - . ID=rna-IXO1104_RS21895;Parent=gene-IXO1104_RS21895;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21895;product=5S ribosomal RNA NZ_CP047492.1 cmsearch exon 4683112 4683226 . - . ID=exon-IXO1104_RS21895-1;Parent=rna-IXO1104_RS21895;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21895;product=5S ribosomal RNA NZ_CP047492.1 RefSeq gene 4683400 4686282 . - . ID=gene-IXO1104_RS21900;Name=IXO1104_RS21900;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1104_RS21900;old_locus_tag=IXO1104_21875 NZ_CP047492.1 cmsearch rRNA 4683400 4686282 . - . ID=rna-IXO1104_RS21900;Parent=gene-IXO1104_RS21900;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21900;product=23S ribosomal RNA NZ_CP047492.1 cmsearch exon 4683400 4686282 . - . ID=exon-IXO1104_RS21900-1;Parent=rna-IXO1104_RS21900;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21900;product=23S ribosomal RNA NZ_CP047492.1 RefSeq gene 4686510 4686586 . - . ID=gene-IXO1104_RS21905;Name=IXO1104_RS21905;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS21905;old_locus_tag=IXO1104_21880 NZ_CP047492.1 tRNAscan-SE tRNA 4686510 4686586 . - . ID=rna-IXO1104_RS21905;Parent=gene-IXO1104_RS21905;anticodon=(pos:complement(4686550..4686552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21905;product=tRNA-Ile NZ_CP047492.1 tRNAscan-SE exon 4686510 4686586 . - . ID=exon-IXO1104_RS21905-1;Parent=rna-IXO1104_RS21905;anticodon=(pos:complement(4686550..4686552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21905;product=tRNA-Ile NZ_CP047492.1 RefSeq gene 4686606 4686681 . - . ID=gene-IXO1104_RS21910;Name=IXO1104_RS21910;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS21910;old_locus_tag=IXO1104_21885 NZ_CP047492.1 tRNAscan-SE tRNA 4686606 4686681 . - . ID=rna-IXO1104_RS21910;Parent=gene-IXO1104_RS21910;anticodon=(pos:complement(4686646..4686648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21910;product=tRNA-Ala NZ_CP047492.1 tRNAscan-SE exon 4686606 4686681 . - . ID=exon-IXO1104_RS21910-1;Parent=rna-IXO1104_RS21910;anticodon=(pos:complement(4686646..4686648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS21910;product=tRNA-Ala NZ_CP047492.1 RefSeq gene 4686775 4688321 . - . ID=gene-IXO1104_RS21915;Name=IXO1104_RS21915;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1104_RS21915;old_locus_tag=IXO1104_21890 NZ_CP047492.1 cmsearch rRNA 4686775 4688321 . - . ID=rna-IXO1104_RS21915;Parent=gene-IXO1104_RS21915;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21915;product=16S ribosomal RNA NZ_CP047492.1 cmsearch exon 4686775 4688321 . - . ID=exon-IXO1104_RS21915-1;Parent=rna-IXO1104_RS21915;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS21915;product=16S ribosomal RNA NZ_CP047492.1 RefSeq gene 4689046 4690257 . - . ID=gene-IXO1104_RS21920;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=IXO1104_RS21920;old_locus_tag=IXO1104_21895 NZ_CP047492.1 Protein Homology CDS 4689046 4690257 . - 0 ID=cds-WP_012446249.1;Parent=gene-IXO1104_RS21920;Dbxref=Genbank:WP_012446249.1;Name=WP_012446249.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407458.1;locus_tag=IXO1104_RS21920;product=tyrosine--tRNA ligase;protein_id=WP_012446249.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4690429 4691847 . + . ID=gene-IXO1104_RS21925;Name=IXO1104_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21925;old_locus_tag=IXO1104_21900 NZ_CP047492.1 Protein Homology CDS 4690429 4691847 . + 0 ID=cds-WP_011257439.1;Parent=gene-IXO1104_RS21925;Dbxref=Genbank:WP_011257439.1;Name=WP_011257439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115461.1;locus_tag=IXO1104_RS21925;product=M23 family metallopeptidase;protein_id=WP_011257439.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4692218 4693351 . + . ID=gene-IXO1104_RS21930;Name=IXO1104_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21930;old_locus_tag=IXO1104_21905 NZ_CP047492.1 Protein Homology CDS 4692218 4693351 . + 0 ID=cds-WP_011257438.1;Parent=gene-IXO1104_RS21930;Dbxref=Genbank:WP_011257438.1;Name=WP_011257438.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1;locus_tag=IXO1104_RS21930;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_011257438.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4693389 4693616 . - . ID=gene-IXO1104_RS21935;Name=IXO1104_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21935;old_locus_tag=IXO1104_21910 NZ_CP047492.1 Protein Homology CDS 4693389 4693616 . - 0 ID=cds-WP_011257437.1;Parent=gene-IXO1104_RS21935;Dbxref=Genbank:WP_011257437.1;Name=WP_011257437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489057.1;locus_tag=IXO1104_RS21935;product=hypothetical protein;protein_id=WP_011257437.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4693675 4694970 . - . ID=gene-IXO1104_RS21940;Name=IXO1104_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21940;old_locus_tag=IXO1104_21915 NZ_CP047492.1 Protein Homology CDS 4693675 4694970 . - 0 ID=cds-WP_011257436.1;Parent=gene-IXO1104_RS21940;Dbxref=Genbank:WP_011257436.1;Name=WP_011257436.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930858.1;locus_tag=IXO1104_RS21940;product=MFS transporter;protein_id=WP_011257436.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4695290 4696090 . - . ID=gene-IXO1104_RS21945;Name=IXO1104_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21945;old_locus_tag=IXO1104_21920 NZ_CP047492.1 Protein Homology CDS 4695290 4696090 . - 0 ID=cds-WP_012446253.1;Parent=gene-IXO1104_RS21945;Dbxref=Genbank:WP_012446253.1;Name=WP_012446253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930855.1;locus_tag=IXO1104_RS21945;product=exodeoxyribonuclease III;protein_id=WP_012446253.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4696218 4696877 . + . ID=gene-IXO1104_RS21950;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=IXO1104_RS21950;old_locus_tag=IXO1104_21925 NZ_CP047492.1 Protein Homology CDS 4696218 4696877 . + 0 ID=cds-WP_011257434.1;Parent=gene-IXO1104_RS21950;Dbxref=Genbank:WP_011257434.1;Name=WP_011257434.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1;locus_tag=IXO1104_RS21950;product=orotate phosphoribosyltransferase;protein_id=WP_011257434.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4696921 4697580 . + . ID=gene-IXO1104_RS21955;Name=IXO1104_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21955;old_locus_tag=IXO1104_21930 NZ_CP047492.1 Protein Homology CDS 4696921 4697580 . + 0 ID=cds-WP_027703571.1;Parent=gene-IXO1104_RS21955;Dbxref=Genbank:WP_027703571.1;Name=WP_027703571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300775.1;locus_tag=IXO1104_RS21955;product=hypothetical protein;protein_id=WP_027703571.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4697694 4698491 . + . ID=gene-IXO1104_RS21960;Name=IXO1104_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21960;old_locus_tag=IXO1104_21935 NZ_CP047492.1 Protein Homology CDS 4697694 4698491 . + 0 ID=cds-WP_012446256.1;Parent=gene-IXO1104_RS21960;Dbxref=Genbank:WP_012446256.1;Name=WP_012446256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914407.1;locus_tag=IXO1104_RS21960;product=AAA family ATPase;protein_id=WP_012446256.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4698491 4699420 . + . ID=gene-IXO1104_RS21965;Name=IXO1104_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21965;old_locus_tag=IXO1104_21940 NZ_CP047492.1 Protein Homology CDS 4698491 4699420 . + 0 ID=cds-WP_011257431.1;Parent=gene-IXO1104_RS21965;Dbxref=Genbank:WP_011257431.1;Name=WP_011257431.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163137.1;locus_tag=IXO1104_RS21965;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_011257431.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4699456 4699764 . + . ID=gene-IXO1104_RS21970;Name=IXO1104_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21970;old_locus_tag=IXO1104_21945 NZ_CP047492.1 Protein Homology CDS 4699456 4699764 . + 0 ID=cds-WP_011257430.1;Parent=gene-IXO1104_RS21970;Dbxref=Genbank:WP_011257430.1;Name=WP_011257430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300778.1;locus_tag=IXO1104_RS21970;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011257430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4699970 4700935 . + . ID=gene-IXO1104_RS21975;Name=IXO1104_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21975;old_locus_tag=IXO1104_21950 NZ_CP047492.1 Protein Homology CDS 4699970 4700935 . + 0 ID=cds-WP_044757178.1;Parent=gene-IXO1104_RS21975;Dbxref=Genbank:WP_044757178.1;Name=WP_044757178.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169566.1;locus_tag=IXO1104_RS21975;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_044757178.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4701290 4702012 . + . ID=gene-IXO1104_RS21980;Name=IXO1104_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21980;old_locus_tag=IXO1104_21955 NZ_CP047492.1 Protein Homology CDS 4701290 4702012 . + 0 ID=cds-WP_011407452.1;Parent=gene-IXO1104_RS21980;Dbxref=Genbank:WP_011407452.1;Name=WP_011407452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038929.1;locus_tag=IXO1104_RS21980;product=glycosyltransferase family 2 protein;protein_id=WP_011407452.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4702012 4702353 . + . ID=gene-IXO1104_RS21985;Name=IXO1104_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21985;old_locus_tag=IXO1104_21960 NZ_CP047492.1 Protein Homology CDS 4702012 4702353 . + 0 ID=cds-WP_010374733.1;Parent=gene-IXO1104_RS21985;Dbxref=Genbank:WP_010374733.1;Name=WP_010374733.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1;locus_tag=IXO1104_RS21985;product=lipid-A-disaccharide synthase N-terminal domain-containing protein;protein_id=WP_010374733.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4702777 4703319 . + . ID=gene-IXO1104_RS21990;Name=IXO1104_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21990;old_locus_tag=IXO1104_21965 NZ_CP047492.1 Protein Homology CDS 4702777 4703319 . + 0 ID=cds-WP_171970783.1;Parent=gene-IXO1104_RS21990;Dbxref=Genbank:WP_171970783.1;Name=WP_171970783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300782.1;locus_tag=IXO1104_RS21990;product=hypothetical protein;protein_id=WP_171970783.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4703427 4705775 . - . ID=gene-IXO1104_RS21995;Name=IXO1104_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS21995;old_locus_tag=IXO1104_21970 NZ_CP047492.1 Protein Homology CDS 4703427 4705775 . - 0 ID=cds-WP_012446260.1;Parent=gene-IXO1104_RS21995;Dbxref=Genbank:WP_012446260.1;Name=WP_012446260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161151.1;locus_tag=IXO1104_RS21995;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_012446260.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4705789 4706256 . - . ID=gene-IXO1104_RS22000;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=IXO1104_RS22000;old_locus_tag=IXO1104_21975 NZ_CP047492.1 Protein Homology CDS 4705789 4706256 . - 0 ID=cds-WP_011407449.1;Parent=gene-IXO1104_RS22000;Dbxref=Genbank:WP_011407449.1;Name=WP_011407449.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091285.1;locus_tag=IXO1104_RS22000;product=dUTP diphosphatase;protein_id=WP_011407449.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4706253 4707527 . - . ID=gene-IXO1104_RS22005;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=IXO1104_RS22005;old_locus_tag=IXO1104_21980 NZ_CP047492.1 Protein Homology CDS 4706253 4707527 . - 0 ID=cds-WP_044757180.1;Parent=gene-IXO1104_RS22005;Dbxref=Genbank:WP_044757180.1;Name=WP_044757180.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1;locus_tag=IXO1104_RS22005;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_044757180.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4707588 4708301 . + . ID=gene-IXO1104_RS22010;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=IXO1104_RS22010;old_locus_tag=IXO1104_21985 NZ_CP047492.1 Protein Homology CDS 4707588 4708301 . + 0 ID=cds-WP_171970784.1;Parent=gene-IXO1104_RS22010;Dbxref=Genbank:WP_171970784.1;Name=WP_171970784.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300786.1;locus_tag=IXO1104_RS22010;product=DNA repair protein RadC;protein_id=WP_171970784.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4708389 4710077 . + . ID=gene-IXO1104_RS22015;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=IXO1104_RS22015;old_locus_tag=IXO1104_21990 NZ_CP047492.1 Protein Homology CDS 4708389 4710077 . + 0 ID=cds-WP_011407446.1;Parent=gene-IXO1104_RS22015;Dbxref=Genbank:WP_011407446.1;Name=WP_011407446.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1;locus_tag=IXO1104_RS22015;product=arginine--tRNA ligase;protein_id=WP_011407446.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4710257 4711138 . + . ID=gene-IXO1104_RS22020;Name=IXO1104_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22020;old_locus_tag=IXO1104_21995 NZ_CP047492.1 Protein Homology CDS 4710257 4711138 . + 0 ID=cds-WP_011407445.1;Parent=gene-IXO1104_RS22020;Dbxref=Genbank:WP_011407445.1;Name=WP_011407445.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091287.1;locus_tag=IXO1104_RS22020;product=SPOR domain-containing protein;protein_id=WP_011407445.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4711145 4711609 . + . ID=gene-IXO1104_RS22025;Name=IXO1104_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22025;old_locus_tag=IXO1104_22000 NZ_CP047492.1 Protein Homology CDS 4711145 4711609 . + 0 ID=cds-WP_027703568.1;Parent=gene-IXO1104_RS22025;Dbxref=Genbank:WP_027703568.1;Name=WP_027703568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407444.1;locus_tag=IXO1104_RS22025;product=hypothetical protein;protein_id=WP_027703568.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4711704 4712459 . + . ID=gene-IXO1104_RS22030;Name=IXO1104_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22030;old_locus_tag=IXO1104_22005 NZ_CP047492.1 Protein Homology CDS 4711704 4712459 . + 0 ID=cds-WP_011407443.1;Parent=gene-IXO1104_RS22030;Dbxref=Genbank:WP_011407443.1;Name=WP_011407443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1;locus_tag=IXO1104_RS22030;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011407443.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4712751 4713185 . - . ID=gene-IXO1104_RS22035;Name=IXO1104_RS22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22035;old_locus_tag=IXO1104_22010;partial=true;pseudo=true;start_range=.,4712751 NZ_CP047492.1 Protein Homology CDS 4712751 4713185 . - 0 ID=cds-IXO1104_RS22035;Parent=gene-IXO1104_RS22035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS22035;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4712751;transl_table=11 NZ_CP047492.1 RefSeq gene 4713427 4714287 . - . ID=gene-IXO1104_RS22040;Name=IXO1104_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22040;old_locus_tag=IXO1104_22015 NZ_CP047492.1 Protein Homology CDS 4713427 4714287 . - 0 ID=cds-WP_011257417.1;Parent=gene-IXO1104_RS22040;Dbxref=Genbank:WP_011257417.1;Name=WP_011257417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968468.1;locus_tag=IXO1104_RS22040;product=serine protein kinase RIO;protein_id=WP_011257417.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4714435 4715296 . + . ID=gene-IXO1104_RS22045;Name=IXO1104_RS22045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22045;old_locus_tag=IXO1104_22020;pseudo=true NZ_CP047492.1 Protein Homology CDS 4714435 4715296 . + 0 ID=cds-IXO1104_RS22045;Parent=gene-IXO1104_RS22045;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368966.1;locus_tag=IXO1104_RS22045;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4715644 4716453 . - . ID=gene-IXO1104_RS22050;Name=IXO1104_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22050;old_locus_tag=IXO1104_22025 NZ_CP047492.1 Protein Homology CDS 4715644 4716453 . - 0 ID=cds-WP_241846857.1;Parent=gene-IXO1104_RS22050;Dbxref=Genbank:WP_241846857.1;Name=WP_241846857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089114.1;locus_tag=IXO1104_RS22050;product=alpha/beta fold hydrolase;protein_id=WP_241846857.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4716754 4717167 . - . ID=gene-IXO1104_RS22055;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=IXO1104_RS22055;old_locus_tag=IXO1104_22030 NZ_CP047492.1 Protein Homology CDS 4716754 4717167 . - 0 ID=cds-WP_027703565.1;Parent=gene-IXO1104_RS22055;Dbxref=Genbank:WP_027703565.1;Name=WP_027703565.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485683.1;locus_tag=IXO1104_RS22055;product=4-carboxymuconolactone decarboxylase;protein_id=WP_027703565.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4717193 4717975 . - . ID=gene-IXO1104_RS22060;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS22060;old_locus_tag=IXO1104_22035 NZ_CP047492.1 Protein Homology CDS 4717193 4717975 . - 0 ID=cds-WP_027703564.1;Parent=gene-IXO1104_RS22060;Dbxref=Genbank:WP_027703564.1;Name=WP_027703564.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118367.1;locus_tag=IXO1104_RS22060;product=3-oxoadipate enol-lactonase;protein_id=WP_027703564.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4717986 4719338 . - . ID=gene-IXO1104_RS22065;Name=IXO1104_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22065;old_locus_tag=IXO1104_22040 NZ_CP047492.1 Protein Homology CDS 4717986 4719338 . - 0 ID=cds-WP_075240110.1;Parent=gene-IXO1104_RS22065;Dbxref=Genbank:WP_075240110.1;Name=WP_075240110.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113350.1;locus_tag=IXO1104_RS22065;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_075240110.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4719489 4719566 . - . ID=gene-IXO1104_RS22070;Name=IXO1104_RS22070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22070;old_locus_tag=IXO1104_22045 NZ_CP047492.1 cmsearch ncRNA 4719489 4719566 . - . ID=rna-IXO1104_RS22070;Parent=gene-IXO1104_RS22070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22070;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4719489 4719566 . - . ID=exon-IXO1104_RS22070-1;Parent=rna-IXO1104_RS22070;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22070;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4719839 4720402 . - . ID=gene-IXO1104_RS22075;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=IXO1104_RS22075;old_locus_tag=IXO1104_22050 NZ_CP047492.1 Protein Homology CDS 4719839 4720402 . - 0 ID=cds-WP_027703562.1;Parent=gene-IXO1104_RS22075;Dbxref=Genbank:WP_027703562.1;Name=WP_027703562.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912759.1;locus_tag=IXO1104_RS22075;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_027703562.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4720407 4721135 . - . ID=gene-IXO1104_RS22080;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=IXO1104_RS22080;old_locus_tag=IXO1104_22055 NZ_CP047492.1 Protein Homology CDS 4720407 4721135 . - 0 ID=cds-WP_012446271.1;Parent=gene-IXO1104_RS22080;Dbxref=Genbank:WP_012446271.1;Name=WP_012446271.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118364.1;locus_tag=IXO1104_RS22080;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_012446271.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4721214 4722422 . - . ID=gene-IXO1104_RS22085;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=IXO1104_RS22085;old_locus_tag=IXO1104_22060 NZ_CP047492.1 Protein Homology CDS 4721214 4722422 . - 0 ID=cds-WP_011257409.1;Parent=gene-IXO1104_RS22085;Dbxref=Genbank:WP_011257409.1;Name=WP_011257409.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577959.1;locus_tag=IXO1104_RS22085;product=3-oxoadipyl-CoA thiolase;protein_id=WP_011257409.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4722419 4722904 . - . ID=gene-IXO1104_RS22090;Name=IXO1104_RS22090;end_range=4722904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22090;old_locus_tag=IXO1104_22065;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4722419 4722904 . - 0 ID=cds-IXO1104_RS22090;Parent=gene-IXO1104_RS22090;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4722904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089108.1;locus_tag=IXO1104_RS22090;partial=true;product=CoA-transferase subunit beta;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4722934 4723975 . - . ID=gene-IXO1104_RS22095;Name=IXO1104_RS22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22095;old_locus_tag=IXO1104_22070;pseudo=true NZ_CP047492.1 Protein Homology CDS 4722934 4723975 . - 0 ID=cds-IXO1104_RS22095;Parent=gene-IXO1104_RS22095;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS22095;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4724249 4724575 . - . ID=gene-IXO1104_RS22100;Name=IXO1104_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22100;old_locus_tag=IXO1104_22075 NZ_CP047492.1 Protein Homology CDS 4724249 4724575 . - 0 ID=cds-WP_011257407.1;Parent=gene-IXO1104_RS22100;Dbxref=Genbank:WP_011257407.1;Name=WP_011257407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156291.1;locus_tag=IXO1104_RS22100;product=thioredoxin family protein;protein_id=WP_011257407.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4724547 4725041 . - . ID=gene-IXO1104_RS22105;Name=IXO1104_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22105;old_locus_tag=IXO1104_22080 NZ_CP047492.1 Protein Homology CDS 4724547 4725041 . - 0 ID=cds-WP_012446274.1;Parent=gene-IXO1104_RS22105;Dbxref=Genbank:WP_012446274.1;Name=WP_012446274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989848.1;locus_tag=IXO1104_RS22105;product=flavodoxin;protein_id=WP_012446274.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4725247 4725738 . - . ID=gene-IXO1104_RS22110;Name=IXO1104_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22110;old_locus_tag=IXO1104_22085 NZ_CP047492.1 Protein Homology CDS 4725247 4725738 . - 0 ID=cds-WP_033013381.1;Parent=gene-IXO1104_RS22110;Dbxref=Genbank:WP_033013381.1;Name=WP_033013381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369832.1;locus_tag=IXO1104_RS22110;product=hypothetical protein;protein_id=WP_033013381.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4725738 4726436 . - . ID=gene-IXO1104_RS22115;Name=IXO1104_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22115;old_locus_tag=IXO1104_22090 NZ_CP047492.1 Protein Homology CDS 4725738 4726436 . - 0 ID=cds-WP_033013380.1;Parent=gene-IXO1104_RS22115;Dbxref=Genbank:WP_033013380.1;Name=WP_033013380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.2;locus_tag=IXO1104_RS22115;product=DUF3800 domain-containing protein;protein_id=WP_033013380.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4726479 4727522 . - . ID=gene-IXO1104_RS22120;Name=IXO1104_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22120;old_locus_tag=IXO1104_22095 NZ_CP047492.1 Protein Homology CDS 4726479 4727522 . - 0 ID=cds-WP_012446275.1;Parent=gene-IXO1104_RS22120;Dbxref=Genbank:WP_012446275.1;Name=WP_012446275.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809721.1;locus_tag=IXO1104_RS22120;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_012446275.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4727698 4730196 . - . ID=gene-IXO1104_RS22125;Name=IXO1104_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22125;old_locus_tag=IXO1104_22100 NZ_CP047492.1 Protein Homology CDS 4727698 4730196 . - 0 ID=cds-WP_012446276.1;Parent=gene-IXO1104_RS22125;Dbxref=Genbank:WP_012446276.1;Name=WP_012446276.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501652.1;locus_tag=IXO1104_RS22125;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_012446276.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4730793 4731836 . - . ID=gene-IXO1104_RS22130;Name=IXO1104_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22130;old_locus_tag=IXO1104_22105 NZ_CP047492.1 Protein Homology CDS 4730793 4731836 . - 0 ID=cds-WP_027703835.1;Parent=gene-IXO1104_RS22130;Dbxref=Genbank:WP_027703835.1;Name=WP_027703835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487316.1;locus_tag=IXO1104_RS22130;product=DUF475 domain-containing protein;protein_id=WP_027703835.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4731943 4734651 . - . ID=gene-IXO1104_RS22135;Name=IXO1104_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22135;old_locus_tag=IXO1104_22110 NZ_CP047492.1 Protein Homology CDS 4731943 4734651 . - 0 ID=cds-WP_012446280.1;Parent=gene-IXO1104_RS22135;Dbxref=Genbank:WP_012446280.1;Name=WP_012446280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506173.1;locus_tag=IXO1104_RS22135;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_012446280.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4734938 4735552 . - . ID=gene-IXO1104_RS22140;Name=IXO1104_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22140;old_locus_tag=IXO1104_22115 NZ_CP047492.1 Protein Homology CDS 4734938 4735552 . - 0 ID=cds-WP_075240102.1;Parent=gene-IXO1104_RS22140;Dbxref=Genbank:WP_075240102.1;Name=WP_075240102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116272.1;locus_tag=IXO1104_RS22140;product=hypothetical protein;protein_id=WP_075240102.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4735630 4736997 . - . ID=gene-IXO1104_RS22145;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=IXO1104_RS22145;old_locus_tag=IXO1104_22120 NZ_CP047492.1 Protein Homology CDS 4735630 4736997 . - 0 ID=cds-WP_011257400.1;Parent=gene-IXO1104_RS22145;Dbxref=Genbank:WP_011257400.1;Name=WP_011257400.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174334.1;locus_tag=IXO1104_RS22145;product=magnesium transporter;protein_id=WP_011257400.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4737675 4739492 . + . ID=gene-IXO1104_RS22150;Name=IXO1104_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22150;old_locus_tag=IXO1104_22125 NZ_CP047492.1 Protein Homology CDS 4737675 4739492 . + 0 ID=cds-WP_012446282.1;Parent=gene-IXO1104_RS22150;Dbxref=Genbank:WP_012446282.1;Name=WP_012446282.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257399.1;locus_tag=IXO1104_RS22150;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_012446282.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4739592 4740911 . - . ID=gene-IXO1104_RS22155;Name=IXO1104_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22155;old_locus_tag=IXO1104_22130 NZ_CP047492.1 Protein Homology CDS 4739592 4740911 . - 0 ID=cds-WP_109182117.1-2;Parent=gene-IXO1104_RS22155;Dbxref=Genbank:WP_109182117.1;Name=WP_109182117.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22155;product=IS701 family transposase;protein_id=WP_109182117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4741392 4743188 . - . ID=gene-IXO1104_RS22160;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=IXO1104_RS22160;old_locus_tag=IXO1104_22135 NZ_CP047492.1 Protein Homology CDS 4741392 4743188 . - 0 ID=cds-WP_011407429.1;Parent=gene-IXO1104_RS22160;Dbxref=Genbank:WP_011407429.1;Name=WP_011407429.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501642.1;locus_tag=IXO1104_RS22160;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011407429.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4743185 4744984 . - . ID=gene-IXO1104_RS22165;Name=IXO1104_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22165;old_locus_tag=IXO1104_22140 NZ_CP047492.1 Protein Homology CDS 4743185 4744984 . - 0 ID=cds-WP_012446285.1;Parent=gene-IXO1104_RS22165;Dbxref=Genbank:WP_012446285.1;Name=WP_012446285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158573.1;locus_tag=IXO1104_RS22165;product=glycoside hydrolase family 15 protein;protein_id=WP_012446285.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4745048 4745377 . - . ID=gene-IXO1104_RS22170;Name=IXO1104_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22170;old_locus_tag=IXO1104_22145 NZ_CP047492.1 Protein Homology CDS 4745048 4745377 . - 0 ID=cds-WP_041181939.1;Parent=gene-IXO1104_RS22170;Dbxref=Genbank:WP_041181939.1;Name=WP_041181939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052720.1;locus_tag=IXO1104_RS22170;product=phosphotyrosine protein phosphatase;protein_id=WP_041181939.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4745404 4748724 . - . ID=gene-IXO1104_RS22175;Name=IXO1104_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22175;old_locus_tag=IXO1104_22150 NZ_CP047492.1 Protein Homology CDS 4745404 4748724 . - 0 ID=cds-WP_027704266.1;Parent=gene-IXO1104_RS22175;Dbxref=Genbank:WP_027704266.1;Name=WP_027704266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471441.1;locus_tag=IXO1104_RS22175;product=ankyrin repeat domain-containing protein;protein_id=WP_027704266.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4748717 4748977 . - . ID=gene-IXO1104_RS22180;Name=IXO1104_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22180;old_locus_tag=IXO1104_22155 NZ_CP047492.1 Protein Homology CDS 4748717 4748977 . - 0 ID=cds-WP_011407425.1;Parent=gene-IXO1104_RS22180;Dbxref=Genbank:WP_011407425.1;Name=WP_011407425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156303.1;locus_tag=IXO1104_RS22180;product=YcgL domain-containing protein;protein_id=WP_011407425.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4749196 4750395 . + . ID=gene-IXO1104_RS22185;Name=IXO1104_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22185;old_locus_tag=IXO1104_22160 NZ_CP047492.1 Protein Homology CDS 4749196 4750395 . + 0 ID=cds-WP_011407424.1;Parent=gene-IXO1104_RS22185;Dbxref=Genbank:WP_011407424.1;Name=WP_011407424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117713.1;locus_tag=IXO1104_RS22185;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_011407424.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4750395 4751168 . + . ID=gene-IXO1104_RS22190;Name=IXO1104_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22190;old_locus_tag=IXO1104_22165 NZ_CP047492.1 Protein Homology CDS 4750395 4751168 . + 0 ID=cds-WP_011257393.1;Parent=gene-IXO1104_RS22190;Dbxref=Genbank:WP_011257393.1;Name=WP_011257393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=IXO1104_RS22190;product=beta-ketoacyl synthase chain length factor;protein_id=WP_011257393.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4751165 4751986 . + . ID=gene-IXO1104_RS22195;Name=IXO1104_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22195;old_locus_tag=IXO1104_22170 NZ_CP047492.1 Protein Homology CDS 4751165 4751986 . + 0 ID=cds-WP_011257392.1;Parent=gene-IXO1104_RS22195;Dbxref=Genbank:WP_011257392.1;Name=WP_011257392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369782.1;locus_tag=IXO1104_RS22195;product=glycosyltransferase family 2 protein;protein_id=WP_011257392.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4751983 4753605 . + . ID=gene-IXO1104_RS22200;Name=IXO1104_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22200;old_locus_tag=IXO1104_22175 NZ_CP047492.1 Protein Homology CDS 4751983 4753605 . + 0 ID=cds-WP_012446289.1;Parent=gene-IXO1104_RS22200;Dbxref=Genbank:WP_012446289.1;Name=WP_012446289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972221.1;locus_tag=IXO1104_RS22200;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_012446289.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4753716 4754030 . + . ID=gene-IXO1104_RS22205;Name=IXO1104_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22205;old_locus_tag=IXO1104_22180 NZ_CP047492.1 Protein Homology CDS 4753716 4754030 . + 0 ID=cds-WP_229002660.1;Parent=gene-IXO1104_RS22205;Dbxref=Genbank:WP_229002660.1;Name=WP_229002660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116619.1;locus_tag=IXO1104_RS22205;product=hypothetical protein;protein_id=WP_229002660.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4754134 4754871 . - . ID=gene-IXO1104_RS22210;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=IXO1104_RS22210;old_locus_tag=IXO1104_22185 NZ_CP047492.1 Protein Homology CDS 4754134 4754871 . - 0 ID=cds-WP_027704265.1;Parent=gene-IXO1104_RS22210;Dbxref=Genbank:WP_027704265.1;Name=WP_027704265.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506159.1;locus_tag=IXO1104_RS22210;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_027704265.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4755050 4756109 . - . ID=gene-IXO1104_RS22215;Name=IXO1104_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22215;old_locus_tag=IXO1104_22190 NZ_CP047492.1 Protein Homology CDS 4755219 4756109 . - 0 ID=cds-WP_099051308.1;Parent=gene-IXO1104_RS22215;Dbxref=Genbank:WP_099051308.1;Name=WP_099051308.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS22215;product=IS630 family transposase;protein_id=WP_099051308.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4755050 4755217 . - 0 ID=cds-WP_099051308.1;Parent=gene-IXO1104_RS22215;Dbxref=Genbank:WP_099051308.1;Name=WP_099051308.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1104_RS22215;product=IS630 family transposase;protein_id=WP_099051308.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4756534 4757907 . - . ID=gene-IXO1104_RS22220;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=IXO1104_RS22220;old_locus_tag=IXO1104_22195 NZ_CP047492.1 Protein Homology CDS 4756534 4757907 . - 0 ID=cds-WP_027704113.1;Parent=gene-IXO1104_RS22220;Dbxref=Genbank:WP_027704113.1;Name=WP_027704113.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158481.1;locus_tag=IXO1104_RS22220;product=8-amino-7-oxononanoate synthase;protein_id=WP_027704113.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4757831 4758865 . - . ID=gene-IXO1104_RS22225;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=IXO1104_RS22225;old_locus_tag=IXO1104_22200 NZ_CP047492.1 Protein Homology CDS 4757831 4758865 . - 0 ID=cds-WP_011257387.1;Parent=gene-IXO1104_RS22225;Dbxref=Genbank:WP_011257387.1;Name=WP_011257387.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368929.1;locus_tag=IXO1104_RS22225;product=biotin synthase BioB;protein_id=WP_011257387.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4758915 4759640 . + . ID=gene-IXO1104_RS22230;Name=IXO1104_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22230;old_locus_tag=IXO1104_22205 NZ_CP047492.1 Protein Homology CDS 4758915 4759640 . + 0 ID=cds-WP_042465430.1;Parent=gene-IXO1104_RS22230;Dbxref=Genbank:WP_042465430.1;Name=WP_042465430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115760.1;locus_tag=IXO1104_RS22230;product=ComF family protein;protein_id=WP_042465430.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4759902 4760801 . - . ID=gene-IXO1104_RS22235;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=IXO1104_RS22235;old_locus_tag=IXO1104_22210 NZ_CP047492.1 Protein Homology CDS 4759902 4760801 . - 0 ID=cds-WP_011257385.1;Parent=gene-IXO1104_RS22235;Dbxref=Genbank:WP_011257385.1;Name=WP_011257385.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050286.1;locus_tag=IXO1104_RS22235;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_011257385.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4761256 4761332 . + . ID=gene-IXO1104_RS22240;Name=IXO1104_RS22240;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS22240;old_locus_tag=IXO1104_22215 NZ_CP047492.1 tRNAscan-SE tRNA 4761256 4761332 . + . ID=rna-IXO1104_RS22240;Parent=gene-IXO1104_RS22240;anticodon=(pos:4761290..4761292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS22240;product=tRNA-Arg NZ_CP047492.1 tRNAscan-SE exon 4761256 4761332 . + . ID=exon-IXO1104_RS22240-1;Parent=rna-IXO1104_RS22240;anticodon=(pos:4761290..4761292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS22240;product=tRNA-Arg NZ_CP047492.1 RefSeq gene 4761496 4762686 . + . ID=gene-IXO1104_RS22245;Name=IXO1104_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22245;old_locus_tag=IXO1104_22220 NZ_CP047492.1 Protein Homology CDS 4761496 4762686 . + 0 ID=cds-WP_075240486.1;Parent=gene-IXO1104_RS22245;Dbxref=Genbank:WP_075240486.1;Name=WP_075240486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369992.1;locus_tag=IXO1104_RS22245;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_075240486.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4763271 4763543 . + . ID=gene-IXO1104_RS22250;Name=IXO1104_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22250;old_locus_tag=IXO1104_22225 NZ_CP047492.1 Protein Homology CDS 4763271 4763543 . + 0 ID=cds-WP_075240485.1;Parent=gene-IXO1104_RS22250;Dbxref=Genbank:WP_075240485.1;Name=WP_075240485.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=IXO1104_RS22250;product=AlpA family transcriptional regulator;protein_id=WP_075240485.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4763540 4763737 . + . ID=gene-IXO1104_RS22255;Name=IXO1104_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22255;old_locus_tag=IXO1104_22230 NZ_CP047492.1 Protein Homology CDS 4763540 4763737 . + 0 ID=cds-WP_005912599.1;Parent=gene-IXO1104_RS22255;Dbxref=Genbank:WP_005912599.1;Name=WP_005912599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851206.1;locus_tag=IXO1104_RS22255;product=hypothetical protein;protein_id=WP_005912599.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4763745 4764026 . + . ID=gene-IXO1104_RS22260;Name=IXO1104_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22260;old_locus_tag=IXO1104_22235 NZ_CP047492.1 Protein Homology CDS 4763745 4764026 . + 0 ID=cds-WP_075240484.1;Parent=gene-IXO1104_RS22260;Dbxref=Genbank:WP_075240484.1;Name=WP_075240484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369982.1;locus_tag=IXO1104_RS22260;product=ogr/Delta-like zinc finger family protein;protein_id=WP_075240484.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4764320 4764529 . + . ID=gene-IXO1104_RS22265;Name=IXO1104_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22265;old_locus_tag=IXO1104_22240 NZ_CP047492.1 Protein Homology CDS 4764320 4764529 . + 0 ID=cds-WP_075240483.1;Parent=gene-IXO1104_RS22265;Dbxref=Genbank:WP_075240483.1;Name=WP_075240483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905092.1;locus_tag=IXO1104_RS22265;product=hypothetical protein;protein_id=WP_075240483.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4764526 4764741 . + . ID=gene-IXO1104_RS22270;Name=IXO1104_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22270;old_locus_tag=IXO1104_22245 NZ_CP047492.1 Protein Homology CDS 4764526 4764741 . + 0 ID=cds-WP_016905091.1;Parent=gene-IXO1104_RS22270;Dbxref=Genbank:WP_016905091.1;Name=WP_016905091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905091.1;locus_tag=IXO1104_RS22270;product=hypothetical protein;protein_id=WP_016905091.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4764738 4765388 . + . ID=gene-IXO1104_RS22275;Name=IXO1104_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22275;old_locus_tag=IXO1104_22250 NZ_CP047492.1 Protein Homology CDS 4764738 4765388 . + 0 ID=cds-WP_075240482.1;Parent=gene-IXO1104_RS22275;Dbxref=Genbank:WP_075240482.1;Name=WP_075240482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851210.1;locus_tag=IXO1104_RS22275;product=hypothetical protein;protein_id=WP_075240482.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4765396 4766211 . + . ID=gene-IXO1104_RS22280;Name=IXO1104_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22280;old_locus_tag=IXO1104_22255 NZ_CP047492.1 Protein Homology CDS 4765396 4766211 . + 0 ID=cds-WP_241846825.1;Parent=gene-IXO1104_RS22280;Dbxref=Genbank:WP_241846825.1;Name=WP_241846825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851211.1;locus_tag=IXO1104_RS22280;product=toprim domain-containing protein;protein_id=WP_241846825.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4766278 4768116 . + . ID=gene-IXO1104_RS22285;Name=IXO1104_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22285;old_locus_tag=IXO1104_22260 NZ_CP047492.1 Protein Homology CDS 4766278 4768116 . + 0 ID=cds-WP_075240480.1;Parent=gene-IXO1104_RS22285;Dbxref=Genbank:WP_075240480.1;Name=WP_075240480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369966.1;locus_tag=IXO1104_RS22285;product=DUF927 domain-containing protein;protein_id=WP_075240480.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4768198 4768938 . + . ID=gene-IXO1104_RS22290;Name=IXO1104_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22290;old_locus_tag=IXO1104_22265 NZ_CP047492.1 Protein Homology CDS 4768198 4768938 . + 0 ID=cds-WP_075240479.1;Parent=gene-IXO1104_RS22290;Dbxref=Genbank:WP_075240479.1;Name=WP_075240479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904493.1;locus_tag=IXO1104_RS22290;product=hypothetical protein;protein_id=WP_075240479.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4769183 4770418 . - . ID=gene-IXO1104_RS22295;Name=IXO1104_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22295;old_locus_tag=IXO1104_22270 NZ_CP047492.1 Protein Homology CDS 4769183 4770418 . - 0 ID=cds-WP_164994165.1;Parent=gene-IXO1104_RS22295;Dbxref=Genbank:WP_164994165.1;Name=WP_164994165.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS22295;product=ISL3 family transposase;protein_id=WP_164994165.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4770659 4771642 . + . ID=gene-IXO1104_RS22300;Name=IXO1104_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22300;old_locus_tag=IXO1104_22275 NZ_CP047492.1 Protein Homology CDS 4770659 4771642 . + 0 ID=cds-WP_075240748.1;Parent=gene-IXO1104_RS22300;Dbxref=Genbank:WP_075240748.1;Name=WP_075240748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003141003.1;locus_tag=IXO1104_RS22300;product=ATP-binding protein;protein_id=WP_075240748.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4772740 4773696 . - . ID=gene-IXO1104_RS22305;Name=IXO1104_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22305;old_locus_tag=IXO1104_22280 NZ_CP047492.1 Protein Homology CDS 4772740 4773696 . - 0 ID=cds-WP_041182719.1-5;Parent=gene-IXO1104_RS22305;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS22305;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4773777 4775126 . + . ID=gene-IXO1104_RS22310;Name=IXO1104_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22310;old_locus_tag=IXO1104_22285 NZ_CP047492.1 Protein Homology CDS 4773777 4775126 . + 0 ID=cds-WP_206737943.1;Parent=gene-IXO1104_RS22310;Dbxref=Genbank:WP_206737943.1;Name=WP_206737943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=IXO1104_RS22310;product=S8 family peptidase;protein_id=WP_206737943.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4777505 4778611 . + . ID=gene-IXO1104_RS22315;Name=IXO1104_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22315;old_locus_tag=IXO1104_22290 NZ_CP047492.1 Protein Homology CDS 4777505 4778611 . + 0 ID=cds-WP_011407418.1;Parent=gene-IXO1104_RS22315;Dbxref=Genbank:WP_011407418.1;Name=WP_011407418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809543.1;locus_tag=IXO1104_RS22315;product=AI-2E family transporter;protein_id=WP_011407418.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4778743 4779480 . + . ID=gene-IXO1104_RS22320;Name=IXO1104_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22320;old_locus_tag=IXO1104_22295 NZ_CP047492.1 Protein Homology CDS 4778743 4779480 . + 0 ID=cds-WP_011257383.1;Parent=gene-IXO1104_RS22320;Dbxref=Genbank:WP_011257383.1;Name=WP_011257383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257383.1;locus_tag=IXO1104_RS22320;product=HAD family hydrolase;protein_id=WP_011257383.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4779521 4780891 . + . ID=gene-IXO1104_RS22325;Name=IXO1104_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22325;old_locus_tag=IXO1104_22300 NZ_CP047492.1 Protein Homology CDS 4779521 4780891 . + 0 ID=cds-WP_027704114.1;Parent=gene-IXO1104_RS22325;Dbxref=Genbank:WP_027704114.1;Name=WP_027704114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989294.1;locus_tag=IXO1104_RS22325;product=leucyl aminopeptidase family protein;protein_id=WP_027704114.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4780945 4781693 . - . ID=gene-IXO1104_RS22330;Name=IXO1104_RS22330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22330;old_locus_tag=IXO1104_22305;pseudo=true NZ_CP047492.1 Protein Homology CDS 4780945 4781693 . - 0 ID=cds-IXO1104_RS22330;Parent=gene-IXO1104_RS22330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914350.1;locus_tag=IXO1104_RS22330;product=anti-sigma factor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4781690 4782205 . - . ID=gene-IXO1104_RS22335;Name=IXO1104_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22335;old_locus_tag=IXO1104_22310 NZ_CP047492.1 Protein Homology CDS 4781690 4782205 . - 0 ID=cds-WP_012446300.1;Parent=gene-IXO1104_RS22335;Dbxref=Genbank:WP_012446300.1;Name=WP_012446300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446300.1;locus_tag=IXO1104_RS22335;product=RNA polymerase sigma factor;protein_id=WP_012446300.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4782370 4783461 . + . ID=gene-IXO1104_RS22340;Name=IXO1104_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22340;old_locus_tag=IXO1104_22315 NZ_CP047492.1 Protein Homology CDS 4782370 4783461 . + 0 ID=cds-WP_012446301.1;Parent=gene-IXO1104_RS22340;Dbxref=Genbank:WP_012446301.1;Name=WP_012446301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914346.1;locus_tag=IXO1104_RS22340;product=catalase family peroxidase;protein_id=WP_012446301.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4783458 4783991 . + . ID=gene-IXO1104_RS22345;Name=IXO1104_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22345;old_locus_tag=IXO1104_22320 NZ_CP047492.1 Protein Homology CDS 4783458 4783991 . + 0 ID=cds-WP_011257378.1;Parent=gene-IXO1104_RS22345;Dbxref=Genbank:WP_011257378.1;Name=WP_011257378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305394.1;locus_tag=IXO1104_RS22345;product=cytochrome b;protein_id=WP_011257378.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4784166 4784465 . + . ID=gene-IXO1104_RS22350;Name=IXO1104_RS22350;end_range=4784465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22350;old_locus_tag=IXO1104_22325;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4784166 4784465 . + 0 ID=cds-IXO1104_RS22350;Parent=gene-IXO1104_RS22350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4784465,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS22350;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4784692 4785807 . + . ID=gene-IXO1104_RS22355;Name=IXO1104_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22355;old_locus_tag=IXO1104_22330 NZ_CP047492.1 Protein Homology CDS 4784692 4785807 . + 0 ID=cds-WP_011407417.1;Parent=gene-IXO1104_RS22355;Dbxref=Genbank:WP_011407417.1;Name=WP_011407417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158228.1;locus_tag=IXO1104_RS22355;product=alpha/beta hydrolase;protein_id=WP_011407417.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4785887 4786795 . - . ID=gene-IXO1104_RS22360;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=IXO1104_RS22360;old_locus_tag=IXO1104_22335 NZ_CP047492.1 Protein Homology CDS 4785887 4786795 . - 0 ID=cds-WP_011257375.1;Parent=gene-IXO1104_RS22360;Dbxref=Genbank:WP_011257375.1;Name=WP_011257375.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850770.1;locus_tag=IXO1104_RS22360;product=EamA family transporter RarD;protein_id=WP_011257375.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4786792 4787714 . - . ID=gene-IXO1104_RS22365;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=IXO1104_RS22365;old_locus_tag=IXO1104_22340;pseudo=true NZ_CP047492.1 Protein Homology CDS 4786792 4787714 . - 0 ID=cds-IXO1104_RS22365;Parent=gene-IXO1104_RS22365;Note=frameshifted;Ontology_term=GO:0016021;gbkey=CDS;gene=yedA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158230.1;locus_tag=IXO1104_RS22365;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4787759 4788211 . + . ID=gene-IXO1104_RS22370;Name=IXO1104_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22370;old_locus_tag=IXO1104_22345 NZ_CP047492.1 Protein Homology CDS 4787759 4788211 . + 0 ID=cds-WP_011257373.1;Parent=gene-IXO1104_RS22370;Dbxref=Genbank:WP_011257373.1;Name=WP_011257373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304468.1;locus_tag=IXO1104_RS22370;product=Rap1a/Tai family immunity protein;protein_id=WP_011257373.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4788611 4789409 . + . ID=gene-IXO1104_RS22375;Name=IXO1104_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22375;old_locus_tag=IXO1104_22350 NZ_CP047492.1 Protein Homology CDS 4788611 4788882 . + 0 ID=cds-WP_094187763.1-9;Parent=gene-IXO1104_RS22375;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS22375;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4788881 4789409 . + 1 ID=cds-WP_094187763.1-9;Parent=gene-IXO1104_RS22375;Dbxref=Genbank:WP_094187763.1;Name=WP_094187763.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS22375;product=IS5 family transposase;protein_id=WP_094187763.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4789483 4789559 . + . ID=gene-IXO1104_RS22380;Name=IXO1104_RS22380;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22380;old_locus_tag=IXO1104_22355 NZ_CP047492.1 cmsearch ncRNA 4789483 4789559 . + . ID=rna-IXO1104_RS22380;Parent=gene-IXO1104_RS22380;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22380;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4789483 4789559 . + . ID=exon-IXO1104_RS22380-1;Parent=rna-IXO1104_RS22380;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22380;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4789564 4791216 . - . ID=gene-IXO1104_RS22385;Name=IXO1104_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22385;old_locus_tag=IXO1104_22360 NZ_CP047492.1 Protein Homology CDS 4789564 4791216 . - 0 ID=cds-WP_027704117.1;Parent=gene-IXO1104_RS22385;Dbxref=Genbank:WP_027704117.1;Name=WP_027704117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486594.1;locus_tag=IXO1104_RS22385;product=M28 family metallopeptidase;protein_id=WP_027704117.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4791679 4792623 . - . ID=gene-IXO1104_RS22390;Name=IXO1104_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22390;old_locus_tag=IXO1104_22365 NZ_CP047492.1 Protein Homology CDS 4791679 4792623 . - 0 ID=cds-WP_027704118.1;Parent=gene-IXO1104_RS22390;Dbxref=Genbank:WP_027704118.1;Name=WP_027704118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505028.1;locus_tag=IXO1104_RS22390;product=MBL fold metallo-hydrolase;protein_id=WP_027704118.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4792754 4794043 . - . ID=gene-IXO1104_RS22395;Name=IXO1104_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22395;old_locus_tag=IXO1104_22370 NZ_CP047492.1 Protein Homology CDS 4792754 4794043 . - 0 ID=cds-WP_011257370.1;Parent=gene-IXO1104_RS22395;Dbxref=Genbank:WP_011257370.1;Name=WP_011257370.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966942.1;locus_tag=IXO1104_RS22395;product=tryptophan--tRNA ligase;protein_id=WP_011257370.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4794212 4794421 . - . ID=gene-IXO1104_RS22400;Name=IXO1104_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22400;old_locus_tag=IXO1104_22375 NZ_CP047492.1 Protein Homology CDS 4794212 4794421 . - 0 ID=cds-WP_011407411.1;Parent=gene-IXO1104_RS22400;Dbxref=Genbank:WP_011407411.1;Name=WP_011407411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486601.1;locus_tag=IXO1104_RS22400;product=CsbD family protein;protein_id=WP_011407411.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4794665 4794799 . - . ID=gene-IXO1104_RS22405;Name=IXO1104_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22405;old_locus_tag=IXO1104_22380 NZ_CP047492.1 Protein Homology CDS 4794665 4794799 . - 0 ID=cds-WP_011257368.1;Parent=gene-IXO1104_RS22405;Dbxref=Genbank:WP_011257368.1;Name=WP_011257368.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904515.1;locus_tag=IXO1104_RS22405;product=entericidin A/B family lipoprotein;protein_id=WP_011257368.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4794863 4795015 . - . ID=gene-IXO1104_RS22410;Name=IXO1104_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22410;old_locus_tag=IXO1104_22385 NZ_CP047492.1 Protein Homology CDS 4794863 4795015 . - 0 ID=cds-WP_011407410.1;Parent=gene-IXO1104_RS22410;Dbxref=Genbank:WP_011407410.1;Name=WP_011407410.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374875.1;locus_tag=IXO1104_RS22410;product=entericidin A/B family lipoprotein;protein_id=WP_011407410.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4795123 4796046 . - . ID=gene-IXO1104_RS22415;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=IXO1104_RS22415;old_locus_tag=IXO1104_22390 NZ_CP047492.1 Protein Homology CDS 4795123 4796046 . - 0 ID=cds-WP_011407409.1;Parent=gene-IXO1104_RS22415;Dbxref=Genbank:WP_011407409.1;Name=WP_011407409.1;Ontology_term=GO:0019547,GO:0004053;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA;go_process=arginine catabolic process to ornithine|0019547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989327.1;locus_tag=IXO1104_RS22415;product=arginase;protein_id=WP_011407409.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4796368 4796586 . + . ID=gene-IXO1104_RS22420;Name=IXO1104_RS22420;end_range=4796586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22420;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4796368 4796586 . + 0 ID=cds-IXO1104_RS22420;Parent=gene-IXO1104_RS22420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4796586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158238.1;locus_tag=IXO1104_RS22420;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4796578 4797042 . + . ID=gene-IXO1104_RS22425;Name=IXO1104_RS22425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22425;old_locus_tag=IXO1104_22395;partial=true;pseudo=true;start_range=.,4796578 NZ_CP047492.1 Protein Homology CDS 4796578 4797042 . + 0 ID=cds-IXO1104_RS22425;Parent=gene-IXO1104_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374883.1;locus_tag=IXO1104_RS22425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4796578;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4797039 4797581 . + . ID=gene-IXO1104_RS22430;Name=IXO1104_RS22430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22430;pseudo=true NZ_CP047492.1 Protein Homology CDS 4797039 4797581 . + 0 ID=cds-IXO1104_RS22430;Parent=gene-IXO1104_RS22430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159094.1;locus_tag=IXO1104_RS22430;product=GTPase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4798061 4798744 . + . ID=gene-IXO1104_RS22435;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=IXO1104_RS22435;old_locus_tag=IXO1104_22410 NZ_CP047492.1 Protein Homology CDS 4798061 4798744 . + 0 ID=cds-WP_011257363.1;Parent=gene-IXO1104_RS22435;Dbxref=Genbank:WP_011257363.1;Name=WP_011257363.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486617.1;locus_tag=IXO1104_RS22435;product=dTMP kinase;protein_id=WP_011257363.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4799435 4799510 . - . ID=gene-IXO1104_RS22440;Name=IXO1104_RS22440;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS22440;old_locus_tag=IXO1104_22415 NZ_CP047492.1 tRNAscan-SE tRNA 4799435 4799510 . - . ID=rna-IXO1104_RS22440;Parent=gene-IXO1104_RS22440;anticodon=(pos:complement(4799475..4799477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS22440;product=tRNA-Thr NZ_CP047492.1 tRNAscan-SE exon 4799435 4799510 . - . ID=exon-IXO1104_RS22440-1;Parent=rna-IXO1104_RS22440;anticodon=(pos:complement(4799475..4799477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS22440;product=tRNA-Thr NZ_CP047492.1 RefSeq gene 4799543 4800463 . - . ID=gene-IXO1104_RS22445;Name=IXO1104_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22445;old_locus_tag=IXO1104_22420 NZ_CP047492.1 Protein Homology CDS 4799543 4800463 . - 0 ID=cds-WP_011407408.1;Parent=gene-IXO1104_RS22445;Dbxref=Genbank:WP_011407408.1;Name=WP_011407408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112291.1;locus_tag=IXO1104_RS22445;product=SPOR domain-containing protein;protein_id=WP_011407408.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4800473 4801201 . - . ID=gene-IXO1104_RS22450;Name=IXO1104_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22450;old_locus_tag=IXO1104_22425 NZ_CP047492.1 Protein Homology CDS 4800473 4801201 . - 0 ID=cds-WP_011257361.1;Parent=gene-IXO1104_RS22450;Dbxref=Genbank:WP_011257361.1;Name=WP_011257361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154906.1;locus_tag=IXO1104_RS22450;product=type III pantothenate kinase;protein_id=WP_011257361.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4801198 4802214 . - . ID=gene-IXO1104_RS22455;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=IXO1104_RS22455;old_locus_tag=IXO1104_22430 NZ_CP047492.1 Protein Homology CDS 4801198 4802214 . - 0 ID=cds-WP_012446310.1;Parent=gene-IXO1104_RS22455;Dbxref=Genbank:WP_012446310.1;Name=WP_012446310.1;Ontology_term=GO:0006355,GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505037.1;locus_tag=IXO1104_RS22455;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_012446310.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4802521 4802832 . + . ID=gene-IXO1104_RS22460;Name=IXO1104_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22460;old_locus_tag=IXO1104_22435 NZ_CP047492.1 Protein Homology CDS 4802521 4802832 . + 0 ID=cds-WP_012446311.1;Parent=gene-IXO1104_RS22460;Dbxref=Genbank:WP_012446311.1;Name=WP_012446311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154908.1;locus_tag=IXO1104_RS22460;product=hypothetical protein;protein_id=WP_012446311.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4802853 4803596 . + . ID=gene-IXO1104_RS22465;Name=IXO1104_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22465;old_locus_tag=IXO1104_22440 NZ_CP047492.1 Protein Homology CDS 4802853 4803596 . + 0 ID=cds-WP_075239894.1;Parent=gene-IXO1104_RS22465;Dbxref=Genbank:WP_075239894.1;Name=WP_075239894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576450.1;locus_tag=IXO1104_RS22465;product=zinc-dependent peptidase;protein_id=WP_075239894.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4803749 4804933 . - . ID=gene-IXO1104_RS22470;Name=IXO1104_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22470;old_locus_tag=IXO1104_22445 NZ_CP047492.1 Protein Homology CDS 4803749 4804933 . - 0 ID=cds-WP_027704119.1;Parent=gene-IXO1104_RS22470;Dbxref=Genbank:WP_027704119.1;Name=WP_027704119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304202.1;locus_tag=IXO1104_RS22470;product=DUF1501 domain-containing protein;protein_id=WP_027704119.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4805053 4806642 . - . ID=gene-IXO1104_RS22475;Name=IXO1104_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22475;old_locus_tag=IXO1104_22450 NZ_CP047492.1 Protein Homology CDS 4805053 4806642 . - 0 ID=cds-WP_012446313.1;Parent=gene-IXO1104_RS22475;Dbxref=Genbank:WP_012446313.1;Name=WP_012446313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154911.1;locus_tag=IXO1104_RS22475;product=DUF1800 domain-containing protein;protein_id=WP_012446313.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4806763 4808133 . - . ID=gene-IXO1104_RS22480;Name=IXO1104_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22480;old_locus_tag=IXO1104_22455 NZ_CP047492.1 Protein Homology CDS 4806763 4808133 . - 0 ID=cds-WP_012446314.1;Parent=gene-IXO1104_RS22480;Dbxref=Genbank:WP_012446314.1;Name=WP_012446314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171995.1;locus_tag=IXO1104_RS22480;product=ATP-binding protein;protein_id=WP_012446314.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4808208 4808891 . - . ID=gene-IXO1104_RS22485;Name=IXO1104_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22485;old_locus_tag=IXO1104_22460 NZ_CP047492.1 Protein Homology CDS 4808208 4808891 . - 0 ID=cds-WP_002808458.1;Parent=gene-IXO1104_RS22485;Dbxref=Genbank:WP_002808458.1;Name=WP_002808458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1;locus_tag=IXO1104_RS22485;product=response regulator transcription factor;protein_id=WP_002808458.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4808963 4809265 . - . ID=gene-IXO1104_RS22490;Name=IXO1104_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22490;old_locus_tag=IXO1104_22465 NZ_CP047492.1 Protein Homology CDS 4808963 4809265 . - 0 ID=cds-WP_024711526.1;Parent=gene-IXO1104_RS22490;Dbxref=Genbank:WP_024711526.1;Name=WP_024711526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446315.1;locus_tag=IXO1104_RS22490;product=hypothetical protein;protein_id=WP_024711526.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4809601 4810605 . - . ID=gene-IXO1104_RS22495;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=IXO1104_RS22495;old_locus_tag=IXO1104_22470 NZ_CP047492.1 Protein Homology CDS 4809601 4810605 . - 0 ID=cds-WP_011257354.1;Parent=gene-IXO1104_RS22495;Dbxref=Genbank:WP_011257354.1;Name=WP_011257354.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916500.1;locus_tag=IXO1104_RS22495;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_011257354.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4811068 4811292 . - . ID=gene-IXO1104_RS22500;Name=IXO1104_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22500;old_locus_tag=IXO1104_22475 NZ_CP047492.1 Protein Homology CDS 4811068 4811292 . - 0 ID=cds-WP_012446316.1;Parent=gene-IXO1104_RS22500;Dbxref=Genbank:WP_012446316.1;Name=WP_012446316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154914.1;locus_tag=IXO1104_RS22500;product=hypothetical protein;protein_id=WP_012446316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4812013 4812588 . - . ID=gene-IXO1104_RS22505;Name=IXO1104_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22505;old_locus_tag=IXO1104_22480 NZ_CP047492.1 Protein Homology CDS 4812013 4812588 . - 0 ID=cds-WP_011257351.1;Parent=gene-IXO1104_RS22505;Dbxref=Genbank:WP_011257351.1;Name=WP_011257351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374921.1;locus_tag=IXO1104_RS22505;product=ankyrin repeat domain-containing protein;protein_id=WP_011257351.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4812647 4814152 . - . ID=gene-IXO1104_RS22510;Name=katB;gbkey=Gene;gene=katB;gene_biotype=protein_coding;locus_tag=IXO1104_RS22510;old_locus_tag=IXO1104_22485 NZ_CP047492.1 Protein Homology CDS 4812647 4814152 . - 0 ID=cds-WP_178380551.1;Parent=gene-IXO1104_RS22510;Dbxref=Genbank:WP_178380551.1;Name=WP_178380551.1;gbkey=CDS;gene=katB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902786.1;locus_tag=IXO1104_RS22510;product=catalase KatB;protein_id=WP_178380551.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4814897 4815487 . - . ID=gene-IXO1104_RS22515;Name=IXO1104_RS22515;end_range=4815487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22515;old_locus_tag=IXO1104_22490;partial=true;pseudo=true;start_range=.,4814897 NZ_CP047492.1 Protein Homology CDS 4814897 4815487 . - 0 ID=cds-IXO1104_RS22515;Parent=gene-IXO1104_RS22515;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4815487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165225.1;locus_tag=IXO1104_RS22515;partial=true;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudo=true;start_range=.,4814897;transl_table=11 NZ_CP047492.1 RefSeq gene 4815494 4816459 . - . ID=gene-IXO1104_RS22520;Name=IXO1104_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22520;old_locus_tag=IXO1104_22495 NZ_CP047492.1 Protein Homology CDS 4815494 4816459 . - 0 ID=cds-WP_263117766.1;Parent=gene-IXO1104_RS22520;Dbxref=Genbank:WP_263117766.1;Name=WP_263117766.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS22520;product=IS1595-like element ISXo5 family transposase;protein_id=WP_263117766.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4816476 4816799 . - . ID=gene-IXO1104_RS22525;Name=IXO1104_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22525;old_locus_tag=IXO1104_22500;partial=true;pseudo=true;start_range=.,4816476 NZ_CP047492.1 Protein Homology CDS 4816476 4816799 . - 0 ID=cds-IXO1104_RS22525;Parent=gene-IXO1104_RS22525;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165225.1;locus_tag=IXO1104_RS22525;partial=true;product=HlyD family secretion protein;pseudo=true;start_range=.,4816476;transl_table=11 NZ_CP047492.1 RefSeq gene 4817082 4819214 . - . ID=gene-IXO1104_RS22530;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=IXO1104_RS22530;old_locus_tag=IXO1104_22505 NZ_CP047492.1 Protein Homology CDS 4817082 4819214 . - 0 ID=cds-WP_011257345.1;Parent=gene-IXO1104_RS22530;Dbxref=Genbank:WP_011257345.1;Name=WP_011257345.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505052.1;locus_tag=IXO1104_RS22530;product=ATP-dependent DNA helicase DinG;protein_id=WP_011257345.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4819492 4819700 . - . ID=gene-IXO1104_RS22535;Name=IXO1104_RS22535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22535;old_locus_tag=IXO1104_22510;pseudo=true NZ_CP047492.1 Protein Homology CDS 4819492 4819700 . - 0 ID=cds-IXO1104_RS22535;Parent=gene-IXO1104_RS22535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156258.1;locus_tag=IXO1104_RS22535;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4819676 4820074 . - . ID=gene-IXO1104_RS22540;Name=IXO1104_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22540;old_locus_tag=IXO1104_22515 NZ_CP047492.1 Protein Homology CDS 4819676 4820074 . - 0 ID=cds-WP_011257343.1;Parent=gene-IXO1104_RS22540;Dbxref=Genbank:WP_011257343.1;Name=WP_011257343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505055.1;locus_tag=IXO1104_RS22540;product=hypothetical protein;protein_id=WP_011257343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4820064 4820915 . - . ID=gene-IXO1104_RS22545;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=IXO1104_RS22545;old_locus_tag=IXO1104_22520 NZ_CP047492.1 Protein Homology CDS 4820064 4820915 . - 0 ID=cds-WP_011257342.1;Parent=gene-IXO1104_RS22545;Dbxref=Genbank:WP_011257342.1;Name=WP_011257342.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257342.1;locus_tag=IXO1104_RS22545;product=shikimate dehydrogenase;protein_id=WP_011257342.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4820968 4821849 . + . ID=gene-IXO1104_RS22550;Name=IXO1104_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22550;old_locus_tag=IXO1104_22525 NZ_CP047492.1 Protein Homology CDS 4820968 4821849 . + 0 ID=cds-WP_027703509.1;Parent=gene-IXO1104_RS22550;Dbxref=Genbank:WP_027703509.1;Name=WP_027703509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156261.1;locus_tag=IXO1104_RS22550;product=PD40 domain-containing protein;protein_id=WP_027703509.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4822287 4822363 . - . ID=gene-IXO1104_RS22555;Name=IXO1104_RS22555;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22555;old_locus_tag=IXO1104_22530 NZ_CP047492.1 cmsearch ncRNA 4822287 4822363 . - . ID=rna-IXO1104_RS22555;Parent=gene-IXO1104_RS22555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22555;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4822287 4822363 . - . ID=exon-IXO1104_RS22555-1;Parent=rna-IXO1104_RS22555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22555;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4822472 4825006 . - . ID=gene-IXO1104_RS22560;Name=IXO1104_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22560;old_locus_tag=IXO1104_22535 NZ_CP047492.1 Protein Homology CDS 4822472 4825006 . - 0 ID=cds-WP_011257339.1;Parent=gene-IXO1104_RS22560;Dbxref=Genbank:WP_011257339.1;Name=WP_011257339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916508.1;locus_tag=IXO1104_RS22560;product=sulfite reductase flavoprotein subunit alpha;protein_id=WP_011257339.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4825240 4825992 . + . ID=gene-IXO1104_RS22565;Name=IXO1104_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22565;old_locus_tag=IXO1104_22540 NZ_CP047492.1 Protein Homology CDS 4825240 4825992 . + 0 ID=cds-WP_011407395.1;Parent=gene-IXO1104_RS22565;Dbxref=Genbank:WP_011407395.1;Name=WP_011407395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407395.1;locus_tag=IXO1104_RS22565;product=DNA/RNA non-specific endonuclease;protein_id=WP_011407395.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4826120 4827034 . - . ID=gene-IXO1104_RS22570;Name=IXO1104_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22570;old_locus_tag=IXO1104_22545 NZ_CP047492.1 Protein Homology CDS 4826120 4827034 . - 0 ID=cds-WP_011407394.1;Parent=gene-IXO1104_RS22570;Dbxref=Genbank:WP_011407394.1;Name=WP_011407394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369930.1;locus_tag=IXO1104_RS22570;product=LysR family transcriptional regulator;protein_id=WP_011407394.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4827127 4828119 . + . ID=gene-IXO1104_RS22575;Name=IXO1104_RS22575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22575;old_locus_tag=IXO1104_22550;pseudo=true NZ_CP047492.1 Protein Homology CDS 4827127 4828119 . + 0 ID=cds-IXO1104_RS22575;Parent=gene-IXO1104_RS22575;Note=internal stop;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117813.1;locus_tag=IXO1104_RS22575;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4828186 4828262 . + . ID=gene-IXO1104_RS22580;Name=IXO1104_RS22580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22580;old_locus_tag=IXO1104_22555 NZ_CP047492.1 cmsearch ncRNA 4828186 4828262 . + . ID=rna-IXO1104_RS22580;Parent=gene-IXO1104_RS22580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22580;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4828186 4828262 . + . ID=exon-IXO1104_RS22580-1;Parent=rna-IXO1104_RS22580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22580;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4828307 4829299 . - . ID=gene-IXO1104_RS22585;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=IXO1104_RS22585;old_locus_tag=IXO1104_22560 NZ_CP047492.1 Protein Homology CDS 4828307 4829299 . - 0 ID=cds-WP_011257334.1;Parent=gene-IXO1104_RS22585;Dbxref=Genbank:WP_011257334.1;Name=WP_011257334.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303747.1;locus_tag=IXO1104_RS22585;product=porphobilinogen synthase;protein_id=WP_011257334.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4829523 4829762 . - . ID=gene-IXO1104_RS22590;Name=IXO1104_RS22590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22590;old_locus_tag=IXO1104_22565;partial=true;pseudo=true;start_range=.,4829523 NZ_CP047492.1 Protein Homology CDS 4829523 4829762 . - 0 ID=cds-IXO1104_RS22590;Parent=gene-IXO1104_RS22590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916515.1;locus_tag=IXO1104_RS22590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4829523;transl_table=11 NZ_CP047492.1 RefSeq gene 4829964 4830422 . + . ID=gene-IXO1104_RS22595;Name=IXO1104_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22595;old_locus_tag=IXO1104_22570 NZ_CP047492.1 Protein Homology CDS 4829964 4830422 . + 0 ID=cds-WP_027703507.1;Parent=gene-IXO1104_RS22595;Dbxref=Genbank:WP_027703507.1;Name=WP_027703507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171777.1;locus_tag=IXO1104_RS22595;product=hypothetical protein;protein_id=WP_027703507.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4830523 4832313 . - . ID=gene-IXO1104_RS22600;Name=IXO1104_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22600;old_locus_tag=IXO1104_22575 NZ_CP047492.1 Protein Homology CDS 4830523 4832313 . - 0 ID=cds-WP_012446330.1;Parent=gene-IXO1104_RS22600;Dbxref=Genbank:WP_012446330.1;Name=WP_012446330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158571.1;locus_tag=IXO1104_RS22600;product=DUF885 domain-containing protein;protein_id=WP_012446330.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4832441 4832513 . + . ID=gene-IXO1104_RS22605;Name=IXO1104_RS22605;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22605;old_locus_tag=IXO1104_22580 NZ_CP047492.1 cmsearch ncRNA 4832441 4832513 . + . ID=rna-IXO1104_RS22605;Parent=gene-IXO1104_RS22605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22605;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4832441 4832513 . + . ID=exon-IXO1104_RS22605-1;Parent=rna-IXO1104_RS22605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22605;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4832522 4834759 . - . ID=gene-IXO1104_RS22610;Name=IXO1104_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22610;old_locus_tag=IXO1104_22585 NZ_CP047492.1 Protein Homology CDS 4832522 4834759 . - 0 ID=cds-WP_011257331.1;Parent=gene-IXO1104_RS22610;Dbxref=Genbank:WP_011257331.1;Name=WP_011257331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257331.1;locus_tag=IXO1104_RS22610;product=S9 family peptidase;protein_id=WP_011257331.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4835184 4835873 . - . ID=gene-IXO1104_RS22615;Name=IXO1104_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22615;old_locus_tag=IXO1104_22590 NZ_CP047492.1 Protein Homology CDS 4835184 4835873 . - 0 ID=cds-WP_011257330.1;Parent=gene-IXO1104_RS22615;Dbxref=Genbank:WP_011257330.1;Name=WP_011257330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804208.1;locus_tag=IXO1104_RS22615;product=glutathione binding-like protein;protein_id=WP_011257330.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4836263 4839277 . + . ID=gene-IXO1104_RS22620;Name=IXO1104_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22620;old_locus_tag=IXO1104_22595 NZ_CP047492.1 Protein Homology CDS 4836263 4839277 . + 0 ID=cds-WP_011407389.1;Parent=gene-IXO1104_RS22620;Dbxref=Genbank:WP_011407389.1;Name=WP_011407389.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158727.1;locus_tag=IXO1104_RS22620;product=TonB-dependent receptor;protein_id=WP_011407389.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4839461 4840162 . + . ID=gene-IXO1104_RS22625;Name=IXO1104_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22625;old_locus_tag=IXO1104_22600 NZ_CP047492.1 Protein Homology CDS 4839461 4840162 . + 0 ID=cds-WP_011407388.1;Parent=gene-IXO1104_RS22625;Dbxref=Genbank:WP_011407388.1;Name=WP_011407388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407388.1;locus_tag=IXO1104_RS22625;product=SapC family protein;protein_id=WP_011407388.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4840152 4841165 . + . ID=gene-IXO1104_RS22630;Name=IXO1104_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22630;old_locus_tag=IXO1104_22605 NZ_CP047492.1 Protein Homology CDS 4840152 4841165 . + 0 ID=cds-WP_012446335.1;Parent=gene-IXO1104_RS22630;Dbxref=Genbank:WP_012446335.1;Name=WP_012446335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156274.1;locus_tag=IXO1104_RS22630;product=cupin-like domain-containing protein;protein_id=WP_012446335.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4841176 4842741 . + . ID=gene-IXO1104_RS22635;Name=IXO1104_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22635;old_locus_tag=IXO1104_22610 NZ_CP047492.1 Protein Homology CDS 4841176 4842741 . + 0 ID=cds-WP_027703504.1;Parent=gene-IXO1104_RS22635;Dbxref=Genbank:WP_027703504.1;Name=WP_027703504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965065.1;locus_tag=IXO1104_RS22635;product=tryptophan 7-halogenase;protein_id=WP_027703504.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4842881 4843903 . + . ID=gene-IXO1104_RS22640;Name=IXO1104_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22640;old_locus_tag=IXO1104_22615 NZ_CP047492.1 Protein Homology CDS 4842881 4843903 . + 0 ID=cds-WP_011407386.1;Parent=gene-IXO1104_RS22640;Dbxref=Genbank:WP_011407386.1;Name=WP_011407386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156276.1;locus_tag=IXO1104_RS22640;product=energy transducer TonB;protein_id=WP_011407386.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4844312 4845505 . - . ID=gene-IXO1104_RS22645;Name=IXO1104_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22645;old_locus_tag=IXO1104_22620 NZ_CP047492.1 Protein Homology CDS 4844312 4845505 . - 0 ID=cds-WP_011257323.1;Parent=gene-IXO1104_RS22645;Dbxref=Genbank:WP_011257323.1;Name=WP_011257323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168416.1;locus_tag=IXO1104_RS22645;product=ABC transporter permease;protein_id=WP_011257323.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4845502 4846248 . - . ID=gene-IXO1104_RS22650;Name=IXO1104_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22650;old_locus_tag=IXO1104_22625 NZ_CP047492.1 Protein Homology CDS 4845502 4846248 . - 0 ID=cds-WP_012446337.1;Parent=gene-IXO1104_RS22650;Dbxref=Genbank:WP_012446337.1;Name=WP_012446337.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=IXO1104_RS22650;product=ATP-binding cassette domain-containing protein;protein_id=WP_012446337.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4846280 4847881 . - . ID=gene-IXO1104_RS22655;Name=IXO1104_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22655;old_locus_tag=IXO1104_22630 NZ_CP047492.1 Protein Homology CDS 4846280 4847881 . - 0 ID=cds-WP_027703503.1;Parent=gene-IXO1104_RS22655;Dbxref=Genbank:WP_027703503.1;Name=WP_027703503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849961.1;locus_tag=IXO1104_RS22655;product=alpha/beta hydrolase;protein_id=WP_027703503.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4847942 4848142 . - . ID=gene-IXO1104_RS22660;Name=IXO1104_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22660;old_locus_tag=IXO1104_22635 NZ_CP047492.1 Protein Homology CDS 4847942 4848142 . - 0 ID=cds-WP_011257320.1;Parent=gene-IXO1104_RS22660;Dbxref=Genbank:WP_011257320.1;Name=WP_011257320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903655.1;locus_tag=IXO1104_RS22660;product=helix-turn-helix transcriptional regulator;protein_id=WP_011257320.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4848139 4848726 . - . ID=gene-IXO1104_RS22665;Name=IXO1104_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22665;old_locus_tag=IXO1104_22640 NZ_CP047492.1 Protein Homology CDS 4848139 4848726 . - 0 ID=cds-WP_027703502.1;Parent=gene-IXO1104_RS22665;Dbxref=Genbank:WP_027703502.1;Name=WP_027703502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156281.1;locus_tag=IXO1104_RS22665;product=hypothetical protein;protein_id=WP_027703502.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4848930 4849091 . - . ID=gene-IXO1104_RS22670;Name=IXO1104_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22670;old_locus_tag=IXO1104_22645 NZ_CP047492.1 GeneMarkS-2+ CDS 4848930 4849091 . - 0 ID=cds-WP_153296754.1;Parent=gene-IXO1104_RS22670;Dbxref=Genbank:WP_153296754.1;Name=WP_153296754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS22670;product=hypothetical protein;protein_id=WP_153296754.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4849212 4849484 . - . ID=gene-IXO1104_RS22675;Name=IXO1104_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22675;old_locus_tag=IXO1104_22650 NZ_CP047492.1 Protein Homology CDS 4849212 4849484 . - 0 ID=cds-WP_011407380.1;Parent=gene-IXO1104_RS22675;Dbxref=Genbank:WP_011407380.1;Name=WP_011407380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487297.1;locus_tag=IXO1104_RS22675;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011407380.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4849550 4850539 . + . ID=gene-IXO1104_RS22680;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=IXO1104_RS22680;old_locus_tag=IXO1104_22655 NZ_CP047492.1 Protein Homology CDS 4849550 4850539 . + 0 ID=cds-WP_027703501.1;Parent=gene-IXO1104_RS22680;Dbxref=Genbank:WP_027703501.1;Name=WP_027703501.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;gene=dmeF;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112280.1;locus_tag=IXO1104_RS22680;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_027703501.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4850624 4851451 . - . ID=gene-IXO1104_RS22685;Name=IXO1104_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22685;old_locus_tag=IXO1104_22660 NZ_CP047492.1 Protein Homology CDS 4850624 4851451 . - 0 ID=cds-WP_027703500.1;Parent=gene-IXO1104_RS22685;Dbxref=Genbank:WP_027703500.1;Name=WP_027703500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091363.1;locus_tag=IXO1104_RS22685;product=ferredoxin--NADP reductase;protein_id=WP_027703500.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4851488 4852483 . + . ID=gene-IXO1104_RS22690;Name=IXO1104_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22690;old_locus_tag=IXO1104_22665 NZ_CP047492.1 Protein Homology CDS 4851488 4852483 . + 0 ID=cds-WP_011257314.1;Parent=gene-IXO1104_RS22690;Dbxref=Genbank:WP_011257314.1;Name=WP_011257314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348950.1;locus_tag=IXO1104_RS22690;product=ABC transporter ATP-binding protein;protein_id=WP_011257314.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4852480 4853292 . + . ID=gene-IXO1104_RS22695;Name=IXO1104_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22695;old_locus_tag=IXO1104_22670 NZ_CP047492.1 Protein Homology CDS 4852480 4853292 . + 0 ID=cds-WP_011257313.1;Parent=gene-IXO1104_RS22695;Dbxref=Genbank:WP_011257313.1;Name=WP_011257313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156287.1;locus_tag=IXO1104_RS22695;product=ABC transporter permease;protein_id=WP_011257313.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4853295 4854044 . + . ID=gene-IXO1104_RS22700;Name=IXO1104_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22700;old_locus_tag=IXO1104_22675 NZ_CP047492.1 Protein Homology CDS 4853295 4854044 . + 0 ID=cds-WP_012446344.1;Parent=gene-IXO1104_RS22700;Dbxref=Genbank:WP_012446344.1;Name=WP_012446344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446344.1;locus_tag=IXO1104_RS22700;product=DUF3800 domain-containing protein;protein_id=WP_012446344.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4854163 4854498 . + . ID=gene-IXO1104_RS22705;Name=IXO1104_RS22705;end_range=4854498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22705;old_locus_tag=IXO1104_22680;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4854163 4854498 . + 0 ID=cds-IXO1104_RS22705;Parent=gene-IXO1104_RS22705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4854498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091365.1;locus_tag=IXO1104_RS22705;partial=true;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4854562 4855797 . + . ID=gene-IXO1104_RS22710;Name=IXO1104_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22710;old_locus_tag=IXO1104_22685 NZ_CP047492.1 Protein Homology CDS 4854562 4855797 . + 0 ID=cds-WP_011257570.1-3;Parent=gene-IXO1104_RS22710;Dbxref=Genbank:WP_011257570.1;Name=WP_011257570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS22710;product=ISL3 family transposase;protein_id=WP_011257570.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4855813 4856421 . + . ID=gene-IXO1104_RS22715;Name=IXO1104_RS22715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22715;old_locus_tag=IXO1104_22690;partial=true;pseudo=true;start_range=.,4855813 NZ_CP047492.1 Protein Homology CDS 4855813 4856421 . + 0 ID=cds-IXO1104_RS22715;Parent=gene-IXO1104_RS22715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989852.1;locus_tag=IXO1104_RS22715;partial=true;product=oxidoreductase;pseudo=true;start_range=.,4855813;transl_table=11 NZ_CP047492.1 RefSeq gene 4856535 4856681 . - . ID=gene-IXO1104_RS22720;Name=IXO1104_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22720;old_locus_tag=IXO1104_22695 NZ_CP047492.1 GeneMarkS-2+ CDS 4856535 4856681 . - 0 ID=cds-WP_171970791.1;Parent=gene-IXO1104_RS22720;Dbxref=Genbank:WP_171970791.1;Name=WP_171970791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS22720;product=hypothetical protein;protein_id=WP_171970791.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4856848 4858083 . - . ID=gene-IXO1104_RS22725;Name=IXO1104_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22725;old_locus_tag=IXO1104_22700 NZ_CP047492.1 Protein Homology CDS 4856848 4858083 . - 0 ID=cds-WP_069965030.1-2;Parent=gene-IXO1104_RS22725;Dbxref=Genbank:WP_069965030.1;Name=WP_069965030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS22725;product=ISL3 family transposase;protein_id=WP_069965030.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4858136 4859323 . - . ID=gene-IXO1104_RS22730;Name=IXO1104_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22730;old_locus_tag=IXO1104_22705 NZ_CP047492.1 Protein Homology CDS 4858136 4859323 . - 0 ID=cds-WP_263117768.1;Parent=gene-IXO1104_RS22730;Dbxref=Genbank:WP_263117768.1;Name=WP_263117768.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1104_RS22730;product=IS5 family transposase;protein_id=WP_263117768.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4859458 4860297 . + . ID=gene-IXO1104_RS22735;Name=IXO1104_RS22735;end_range=4860297,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22735;old_locus_tag=IXO1104_22710;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4859458 4860297 . + 0 ID=cds-IXO1104_RS22735;Parent=gene-IXO1104_RS22735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4860297,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22735;partial=true;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4860384 4861349 . + . ID=gene-IXO1104_RS22740;Name=IXO1104_RS22740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22740;old_locus_tag=IXO1104_22715;pseudo=true NZ_CP047492.1 Protein Homology CDS 4860384 4861349 . + 0 ID=cds-IXO1104_RS22740;Parent=gene-IXO1104_RS22740;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS22740;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4861361 4861843 . + . ID=gene-IXO1104_RS22745;Name=IXO1104_RS22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22745;old_locus_tag=IXO1104_22720;partial=true;pseudo=true;start_range=.,4861361 NZ_CP047492.1 Protein Homology CDS 4861361 4861843 . + 0 ID=cds-IXO1104_RS22745;Parent=gene-IXO1104_RS22745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22745;partial=true;product=transposase;pseudo=true;start_range=.,4861361;transl_table=11 NZ_CP047492.1 RefSeq gene 4861927 4862968 . - . ID=gene-IXO1104_RS22750;Name=IXO1104_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22750;old_locus_tag=IXO1104_22725 NZ_CP047492.1 Protein Homology CDS 4862778 4862968 . - 0 ID=cds-WP_230455505.1;Parent=gene-IXO1104_RS22750;Dbxref=Genbank:WP_230455505.1;Name=WP_230455505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS22750;product=IS3 family transposase;protein_id=WP_230455505.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4861927 4862779 . - 1 ID=cds-WP_230455505.1;Parent=gene-IXO1104_RS22750;Dbxref=Genbank:WP_230455505.1;Name=WP_230455505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS22750;product=IS3 family transposase;protein_id=WP_230455505.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4863789 4864552 . + . ID=gene-IXO1104_RS22755;Name=IXO1104_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22755;old_locus_tag=IXO1104_22735 NZ_CP047492.1 Protein Homology CDS 4863789 4864104 . + 0 ID=cds-WP_094187715.1-16;Parent=gene-IXO1104_RS22755;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS22755;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4864104 4864552 . + 2 ID=cds-WP_094187715.1-16;Parent=gene-IXO1104_RS22755;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS22755;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4864612 4865410 . + . ID=gene-IXO1104_RS22760;Name=IXO1104_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22760;old_locus_tag=IXO1104_22740 NZ_CP047492.1 Protein Homology CDS 4864612 4864883 . + 0 ID=cds-WP_094187814.1;Parent=gene-IXO1104_RS22760;Dbxref=Genbank:WP_094187814.1;Name=WP_094187814.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS22760;product=IS5 family transposase;protein_id=WP_094187814.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4864882 4865410 . + 1 ID=cds-WP_094187814.1;Parent=gene-IXO1104_RS22760;Dbxref=Genbank:WP_094187814.1;Name=WP_094187814.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS22760;product=IS5 family transposase;protein_id=WP_094187814.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4865483 4865559 . + . ID=gene-IXO1104_RS22765;Name=IXO1104_RS22765;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS22765;old_locus_tag=IXO1104_22745 NZ_CP047492.1 cmsearch ncRNA 4865483 4865559 . + . ID=rna-IXO1104_RS22765;Parent=gene-IXO1104_RS22765;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22765;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4865483 4865559 . + . ID=exon-IXO1104_RS22765-1;Parent=rna-IXO1104_RS22765;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS22765;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4865762 4866046 . - . ID=gene-IXO1104_RS22770;Name=IXO1104_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22770;old_locus_tag=IXO1104_22750 NZ_CP047492.1 Protein Homology CDS 4865762 4866046 . - 0 ID=cds-WP_011407366.1;Parent=gene-IXO1104_RS22770;Dbxref=Genbank:WP_011407366.1;Name=WP_011407366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=IXO1104_RS22770;product=hypothetical protein;protein_id=WP_011407366.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4866545 4867899 . + . ID=gene-IXO1104_RS22775;Name=IXO1104_RS22775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22775;old_locus_tag=IXO1104_22755;pseudo=true NZ_CP047492.1 Protein Homology CDS 4866545 4867899 . + 0 ID=cds-IXO1104_RS22775;Parent=gene-IXO1104_RS22775;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS22775;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4868393 4869502 . - . ID=gene-IXO1104_RS22780;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=IXO1104_RS22780;old_locus_tag=IXO1104_22760 NZ_CP047492.1 Protein Homology CDS 4868393 4869502 . - 0 ID=cds-WP_027703866.1;Parent=gene-IXO1104_RS22780;Dbxref=Genbank:WP_027703866.1;Name=WP_027703866.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379859.1;locus_tag=IXO1104_RS22780;product=D-alanine--D-alanine ligase;protein_id=WP_027703866.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4869737 4870381 . + . ID=gene-IXO1104_RS22785;Name=IXO1104_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22785;old_locus_tag=IXO1104_22765 NZ_CP047492.1 Protein Homology CDS 4869737 4870381 . + 0 ID=cds-WP_044757204.1;Parent=gene-IXO1104_RS22785;Dbxref=Genbank:WP_044757204.1;Name=WP_044757204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156427.1;locus_tag=IXO1104_RS22785;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_044757204.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4870378 4872051 . + . ID=gene-IXO1104_RS22790;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=IXO1104_RS22790;old_locus_tag=IXO1104_22770 NZ_CP047492.1 Protein Homology CDS 4870378 4872051 . + 0 ID=cds-WP_011257293.1;Parent=gene-IXO1104_RS22790;Dbxref=Genbank:WP_011257293.1;Name=WP_011257293.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304665.1;locus_tag=IXO1104_RS22790;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_011257293.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4872061 4872554 . + . ID=gene-IXO1104_RS22795;Name=IXO1104_RS22795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22795;old_locus_tag=IXO1104_22775;pseudo=true NZ_CP047492.1 Protein Homology CDS 4872061 4872554 . + 0 ID=cds-IXO1104_RS22795;Parent=gene-IXO1104_RS22795;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156429.1;locus_tag=IXO1104_RS22795;product=cupin domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4872779 4873531 . + . ID=gene-IXO1104_RS22800;Name=IXO1104_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22800;old_locus_tag=IXO1104_22780 NZ_CP047492.1 Protein Homology CDS 4872779 4873531 . + 0 ID=cds-WP_027703865.1;Parent=gene-IXO1104_RS22800;Dbxref=Genbank:WP_027703865.1;Name=WP_027703865.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301087.1;locus_tag=IXO1104_RS22800;product=pseudouridine synthase;protein_id=WP_027703865.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4873627 4874205 . - . ID=gene-IXO1104_RS22805;Name=IXO1104_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22805;old_locus_tag=IXO1104_22785 NZ_CP047492.1 Protein Homology CDS 4873627 4874205 . - 0 ID=cds-WP_011407361.1;Parent=gene-IXO1104_RS22805;Dbxref=Genbank:WP_011407361.1;Name=WP_011407361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966404.1;locus_tag=IXO1104_RS22805;product=DUF2059 domain-containing protein;protein_id=WP_011407361.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4874262 4874693 . + . ID=gene-IXO1104_RS22810;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=IXO1104_RS22810;old_locus_tag=IXO1104_22790 NZ_CP047492.1 Protein Homology CDS 4874262 4874693 . + 0 ID=cds-WP_011257289.1;Parent=gene-IXO1104_RS22810;Dbxref=Genbank:WP_011257289.1;Name=WP_011257289.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257289.1;locus_tag=IXO1104_RS22810;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_011257289.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4874696 4875325 . + . ID=gene-IXO1104_RS22815;Name=IXO1104_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22815;old_locus_tag=IXO1104_22795 NZ_CP047492.1 Protein Homology CDS 4874696 4875325 . + 0 ID=cds-WP_011257288.1;Parent=gene-IXO1104_RS22815;Dbxref=Genbank:WP_011257288.1;Name=WP_011257288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301090.1;locus_tag=IXO1104_RS22815;product=lysophosphatidylcholine acyltransferase;protein_id=WP_011257288.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4875404 4875589 . + . ID=gene-IXO1104_RS22820;Name=IXO1104_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22820;old_locus_tag=IXO1104_22800 NZ_CP047492.1 GeneMarkS-2+ CDS 4875404 4875589 . + 0 ID=cds-WP_012446356.1;Parent=gene-IXO1104_RS22820;Dbxref=Genbank:WP_012446356.1;Name=WP_012446356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS22820;product=hypothetical protein;protein_id=WP_012446356.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4875695 4875854 . + . ID=gene-IXO1104_RS22825;Name=IXO1104_RS22825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22825;partial=true;pseudo=true;start_range=.,4875695 NZ_CP047492.1 Protein Homology CDS 4875695 4875854 . + 0 ID=cds-IXO1104_RS22825;Parent=gene-IXO1104_RS22825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117620.1;locus_tag=IXO1104_RS22825;partial=true;product=isoaspartyl peptidase/L-asparaginase;pseudo=true;start_range=.,4875695;transl_table=11 NZ_CP047492.1 RefSeq gene 4875963 4878131 . + . ID=gene-IXO1104_RS22830;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=IXO1104_RS22830;old_locus_tag=IXO1104_22810 NZ_CP047492.1 Protein Homology CDS 4875963 4878131 . + 0 ID=cds-WP_012446358.1;Parent=gene-IXO1104_RS22830;Dbxref=Genbank:WP_012446358.1;Name=WP_012446358.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115821.1;locus_tag=IXO1104_RS22830;product=peptidyl-dipeptidase Dcp;protein_id=WP_012446358.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4878258 4880420 . - . ID=gene-IXO1104_RS22835;Name=IXO1104_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22835;old_locus_tag=IXO1104_22815 NZ_CP047492.1 Protein Homology CDS 4878258 4880420 . - 0 ID=cds-WP_027703864.1;Parent=gene-IXO1104_RS22835;Dbxref=Genbank:WP_027703864.1;Name=WP_027703864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115822.1;locus_tag=IXO1104_RS22835;product=hypothetical protein;protein_id=WP_027703864.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4880990 4881241 . + . ID=gene-IXO1104_RS22840;Name=tnpA;end_range=4881241,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=IXO1104_RS22840;old_locus_tag=IXO1104_22820;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4880990 4881241 . + 0 ID=cds-IXO1104_RS22840;Parent=gene-IXO1104_RS22840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4881241,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043768368.1;locus_tag=IXO1104_RS22840;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4881247 4882212 . - . ID=gene-IXO1104_RS22845;Name=IXO1104_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22845;old_locus_tag=IXO1104_22825 NZ_CP047492.1 Protein Homology CDS 4881247 4882212 . - 0 ID=cds-WP_129215657.1;Parent=gene-IXO1104_RS22845;Dbxref=Genbank:WP_129215657.1;Name=WP_129215657.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS22845;product=IS1595 family transposase;protein_id=WP_129215657.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4882299 4882394 . + . ID=gene-IXO1104_RS22850;Name=IXO1104_RS22850;end_range=4882394,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22850;old_locus_tag=IXO1104_22830;partial=true;pseudo=true;start_range=.,4882299 NZ_CP047492.1 Protein Homology CDS 4882299 4882394 . + 0 ID=cds-IXO1104_RS22850;Parent=gene-IXO1104_RS22850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4882394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043768368.1;locus_tag=IXO1104_RS22850;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,4882299;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4882405 4883879 . - . ID=gene-IXO1104_RS22855;Name=IXO1104_RS22855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22855;old_locus_tag=IXO1104_22835;pseudo=true NZ_CP047492.1 Protein Homology CDS 4882405 4883879 . - 0 ID=cds-IXO1104_RS22855;Parent=gene-IXO1104_RS22855;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1104_RS22855;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4884316 4884675 . - . ID=gene-IXO1104_RS22860;Name=IXO1104_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22860;old_locus_tag=IXO1104_22840 NZ_CP047492.1 Protein Homology CDS 4884316 4884675 . - 0 ID=cds-WP_011257283.1;Parent=gene-IXO1104_RS22860;Dbxref=Genbank:WP_011257283.1;Name=WP_011257283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349049.1;locus_tag=IXO1104_RS22860;product=L-fucose mutarotase;protein_id=WP_011257283.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4884678 4885979 . - . ID=gene-IXO1104_RS22865;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IXO1104_RS22865;old_locus_tag=IXO1104_22845 NZ_CP047492.1 Protein Homology CDS 4884678 4885979 . - 0 ID=cds-WP_011407355.1;Parent=gene-IXO1104_RS22865;Dbxref=Genbank:WP_011407355.1;Name=WP_011407355.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161920.1;locus_tag=IXO1104_RS22865;product=L-fucose:H+ symporter permease;protein_id=WP_011407355.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4886160 4886936 . + . ID=gene-IXO1104_RS22870;Name=IXO1104_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22870;old_locus_tag=IXO1104_22850 NZ_CP047492.1 Protein Homology CDS 4886160 4886936 . + 0 ID=cds-WP_011407354.1;Parent=gene-IXO1104_RS22870;Dbxref=Genbank:WP_011407354.1;Name=WP_011407354.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407354.1;locus_tag=IXO1104_RS22870;product=helix-turn-helix domain-containing protein;protein_id=WP_011407354.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4887065 4887828 . - . ID=gene-IXO1104_RS22875;Name=IXO1104_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22875;old_locus_tag=IXO1104_22855 NZ_CP047492.1 Protein Homology CDS 4887513 4887828 . - 0 ID=cds-WP_094187715.1-17;Parent=gene-IXO1104_RS22875;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS22875;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4887065 4887513 . - 2 ID=cds-WP_094187715.1-17;Parent=gene-IXO1104_RS22875;Dbxref=Genbank:WP_094187715.1;Name=WP_094187715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS22875;product=IS5 family transposase;protein_id=WP_094187715.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4888229 4888813 . + . ID=gene-IXO1104_RS22880;Name=IXO1104_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22880;old_locus_tag=IXO1104_22860 NZ_CP047492.1 Protein Homology CDS 4888229 4888813 . + 0 ID=cds-WP_011407353.1;Parent=gene-IXO1104_RS22880;Dbxref=Genbank:WP_011407353.1;Name=WP_011407353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407353.1;locus_tag=IXO1104_RS22880;product=manganese efflux pump MntP family protein;protein_id=WP_011407353.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4889006 4892458 . - . ID=gene-IXO1104_RS22885;Name=IXO1104_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22885;old_locus_tag=IXO1104_22865 NZ_CP047492.1 Protein Homology CDS 4889006 4892458 . - 0 ID=cds-WP_011407352.1;Parent=gene-IXO1104_RS22885;Dbxref=Genbank:WP_011407352.1;Name=WP_011407352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446364.1;locus_tag=IXO1104_RS22885;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011407352.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4893203 4895845 . + . ID=gene-IXO1104_RS22890;Name=IXO1104_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22890;old_locus_tag=IXO1104_22870 NZ_CP047492.1 Protein Homology CDS 4893203 4895845 . + 0 ID=cds-WP_075240712.1;Parent=gene-IXO1104_RS22890;Dbxref=Genbank:WP_075240712.1;Name=WP_075240712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966495.1;locus_tag=IXO1104_RS22890;product=glycosyl hydrolase 115 family protein;protein_id=WP_075240712.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4895949 4898348 . - . ID=gene-IXO1104_RS22895;Name=IXO1104_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22895;old_locus_tag=IXO1104_22875 NZ_CP047492.1 Protein Homology CDS 4895949 4898348 . - 0 ID=cds-WP_044757567.1;Parent=gene-IXO1104_RS22895;Dbxref=Genbank:WP_044757567.1;Name=WP_044757567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487634.1;locus_tag=IXO1104_RS22895;product=NdvB protein;protein_id=WP_044757567.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4898351 4899733 . - . ID=gene-IXO1104_RS22900;Name=IXO1104_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22900;old_locus_tag=IXO1104_22880 NZ_CP047492.1 Protein Homology CDS 4898351 4899733 . - 0 ID=cds-WP_027703801.1;Parent=gene-IXO1104_RS22900;Dbxref=Genbank:WP_027703801.1;Name=WP_027703801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302349.1;locus_tag=IXO1104_RS22900;product=MFS transporter;protein_id=WP_027703801.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4899891 4900475 . + . ID=gene-IXO1104_RS22905;Name=IXO1104_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22905;old_locus_tag=IXO1104_22885 NZ_CP047492.1 Protein Homology CDS 4899891 4900475 . + 0 ID=cds-WP_075239940.1;Parent=gene-IXO1104_RS22905;Dbxref=Genbank:WP_075239940.1;Name=WP_075239940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571736.1;locus_tag=IXO1104_RS22905;product=gluconokinase;protein_id=WP_075239940.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4901356 4903110 . + . ID=gene-IXO1104_RS22910;Name=IXO1104_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22910;old_locus_tag=IXO1104_22890 NZ_CP047492.1 Protein Homology CDS 4901356 4903110 . + 0 ID=cds-WP_027703799.1;Parent=gene-IXO1104_RS22910;Dbxref=Genbank:WP_027703799.1;Name=WP_027703799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407346.1;locus_tag=IXO1104_RS22910;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_027703799.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4903418 4903645 . - . ID=gene-IXO1104_RS22915;Name=IXO1104_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22915;old_locus_tag=IXO1104_22895 NZ_CP047492.1 Protein Homology CDS 4903418 4903645 . - 0 ID=cds-WP_011257273.1;Parent=gene-IXO1104_RS22915;Dbxref=Genbank:WP_011257273.1;Name=WP_011257273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849816.1;locus_tag=IXO1104_RS22915;product=hypothetical protein;protein_id=WP_011257273.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4903626 4904075 . - . ID=gene-IXO1104_RS22920;Name=IXO1104_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22920;old_locus_tag=IXO1104_22900 NZ_CP047492.1 Protein Homology CDS 4903626 4904075 . - 0 ID=cds-WP_011407344.1;Parent=gene-IXO1104_RS22920;Dbxref=Genbank:WP_011407344.1;Name=WP_011407344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966506.1;locus_tag=IXO1104_RS22920;product=3-dehydroquinate dehydratase;protein_id=WP_011407344.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4904086 4904514 . - . ID=gene-IXO1104_RS22925;Name=IXO1104_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22925;old_locus_tag=IXO1104_22905 NZ_CP047492.1 Protein Homology CDS 4904086 4904514 . - 0 ID=cds-WP_011257271.1;Parent=gene-IXO1104_RS22925;Dbxref=Genbank:WP_011257271.1;Name=WP_011257271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303396.1;locus_tag=IXO1104_RS22925;product=hypothetical protein;protein_id=WP_011257271.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4904834 4905876 . + . ID=gene-IXO1104_RS22930;Name=IXO1104_RS22930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22930;old_locus_tag=IXO1104_22910;pseudo=true NZ_CP047492.1 Protein Homology CDS 4904834 4905876 . + 0 ID=cds-IXO1104_RS22930;Parent=gene-IXO1104_RS22930;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1104_RS22930;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4906009 4907328 . - . ID=gene-IXO1104_RS22935;Name=IXO1104_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22935;old_locus_tag=IXO1104_22915 NZ_CP047492.1 Protein Homology CDS 4906009 4907328 . - 0 ID=cds-WP_115801909.1;Parent=gene-IXO1104_RS22935;Dbxref=Genbank:WP_115801909.1;Name=WP_115801909.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22935;product=IS701 family transposase;protein_id=WP_115801909.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4907417 4908580 . - . ID=gene-IXO1104_RS22940;Name=IXO1104_RS22940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22940;old_locus_tag=IXO1104_22920;pseudo=true NZ_CP047492.1 Protein Homology CDS 4907417 4908580 . - 0 ID=cds-IXO1104_RS22940;Parent=gene-IXO1104_RS22940;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035386.1;locus_tag=IXO1104_RS22940;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4908728 4909987 . + . ID=gene-IXO1104_RS22945;Name=IXO1104_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22945;old_locus_tag=IXO1104_22925 NZ_CP047492.1 Protein Homology CDS 4908728 4909987 . + 0 ID=cds-WP_241846858.1;Parent=gene-IXO1104_RS22945;Dbxref=Genbank:WP_241846858.1;Name=WP_241846858.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=IXO1104_RS22945;product=IS701 family transposase;protein_id=WP_241846858.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4910200 4911168 . - . ID=gene-IXO1104_RS22950;Name=IXO1104_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22950;old_locus_tag=IXO1104_22930 NZ_CP047492.1 Protein Homology CDS 4910200 4911168 . - 0 ID=cds-WP_011258802.1-18;Parent=gene-IXO1104_RS22950;Dbxref=Genbank:WP_011258802.1;Name=WP_011258802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1104_RS22950;product=IS5-like element ISXo1 family transposase;protein_id=WP_011258802.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4911305 4911496 . + . ID=gene-IXO1104_RS22955;Name=IXO1104_RS22955;end_range=4911496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22955;old_locus_tag=IXO1104_22935;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4911305 4911496 . + 0 ID=cds-IXO1104_RS22955;Parent=gene-IXO1104_RS22955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4911496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22955;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4911585 4912364 . + . ID=gene-IXO1104_RS22960;Name=IXO1104_RS22960;end_range=4912364,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22960;old_locus_tag=IXO1104_22940;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4911585 4912364 . + 0 ID=cds-IXO1104_RS22960;Parent=gene-IXO1104_RS22960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4912364,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS22960;partial=true;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4912451 4913770 . - . ID=gene-IXO1104_RS22965;Name=IXO1104_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22965;old_locus_tag=IXO1104_22945 NZ_CP047492.1 Protein Homology CDS 4912451 4913770 . - 0 ID=cds-WP_117231531.1;Parent=gene-IXO1104_RS22965;Dbxref=Genbank:WP_117231531.1;Name=WP_117231531.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22965;product=IS701 family transposase;protein_id=WP_117231531.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4914063 4915298 . - . ID=gene-IXO1104_RS22970;Name=IXO1104_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22970;old_locus_tag=IXO1104_22950 NZ_CP047492.1 Protein Homology CDS 4914063 4915298 . - 0 ID=cds-WP_011257310.1-2;Parent=gene-IXO1104_RS22970;Dbxref=Genbank:WP_011257310.1;Name=WP_011257310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1104_RS22970;product=ISL3 family transposase;protein_id=WP_011257310.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4915362 4916573 . - . ID=gene-IXO1104_RS22975;Name=IXO1104_RS22975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22975;old_locus_tag=IXO1104_22955;partial=true;pseudo=true;start_range=.,4915362 NZ_CP047492.1 Protein Homology CDS 4915362 4916573 . - 0 ID=cds-IXO1104_RS22975;Parent=gene-IXO1104_RS22975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS22975;partial=true;product=IS701 family transposase;pseudo=true;start_range=.,4915362;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4916644 4916922 . + . ID=gene-IXO1104_RS22980;Name=IXO1104_RS22980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22980;old_locus_tag=IXO1104_22960;partial=true;pseudo=true;start_range=.,4916644 NZ_CP047492.1 Protein Homology CDS 4916644 4916922 . + 0 ID=cds-IXO1104_RS22980;Parent=gene-IXO1104_RS22980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS22980;partial=true;product=transposase;pseudo=true;start_range=.,4916644;transl_table=11 NZ_CP047492.1 RefSeq gene 4916980 4917936 . - . ID=gene-IXO1104_RS22985;Name=IXO1104_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22985;old_locus_tag=IXO1104_22965 NZ_CP047492.1 Protein Homology CDS 4916980 4917936 . - 0 ID=cds-WP_041182821.1;Parent=gene-IXO1104_RS22985;Dbxref=Genbank:WP_041182821.1;Name=WP_041182821.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS22985;product=IS30 family transposase;protein_id=WP_041182821.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4918024 4918692 . + . ID=gene-IXO1104_RS22990;Name=IXO1104_RS22990;end_range=4918692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS22990;old_locus_tag=IXO1104_22970;partial=true;pseudo=true;start_range=.,4918024 NZ_CP047492.1 Protein Homology CDS 4918024 4918692 . + 0 ID=cds-IXO1104_RS22990;Parent=gene-IXO1104_RS22990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=4918692,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1104_RS22990;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,4918024;transl_table=11 NZ_CP047492.1 RefSeq gene 4918781 4919746 . + . ID=gene-IXO1104_RS22995;Name=IXO1104_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS22995;old_locus_tag=IXO1104_22975 NZ_CP047492.1 Protein Homology CDS 4918781 4919746 . + 0 ID=cds-WP_109182116.1;Parent=gene-IXO1104_RS22995;Dbxref=Genbank:WP_109182116.1;Name=WP_109182116.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS22995;product=IS1595 family transposase;protein_id=WP_109182116.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4919764 4920321 . + . ID=gene-IXO1104_RS23000;Name=IXO1104_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23000;old_locus_tag=IXO1104_22980 NZ_CP047492.1 Protein Homology CDS 4919764 4920321 . + 0 ID=cds-WP_069965040.1;Parent=gene-IXO1104_RS23000;Dbxref=Genbank:WP_069965040.1;Name=WP_069965040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112941.1;locus_tag=IXO1104_RS23000;product=GNAT family N-acetyltransferase;protein_id=WP_069965040.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4920340 4920627 . - . ID=gene-IXO1104_RS23005;Name=IXO1104_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23005;old_locus_tag=IXO1104_22985 NZ_CP047492.1 Protein Homology CDS 4920340 4920627 . - 0 ID=cds-WP_011257259.1;Parent=gene-IXO1104_RS23005;Dbxref=Genbank:WP_011257259.1;Name=WP_011257259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364918.1;locus_tag=IXO1104_RS23005;product=hypothetical protein;protein_id=WP_011257259.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4921012 4921806 . + . ID=gene-IXO1104_RS23010;Name=IXO1104_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23010;old_locus_tag=IXO1104_22990 NZ_CP047492.1 Protein Homology CDS 4921012 4921806 . + 0 ID=cds-WP_011407332.1;Parent=gene-IXO1104_RS23010;Dbxref=Genbank:WP_011407332.1;Name=WP_011407332.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451570.1;locus_tag=IXO1104_RS23010;product=ATP-binding cassette domain-containing protein;protein_id=WP_011407332.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4921806 4922555 . + . ID=gene-IXO1104_RS23015;Name=IXO1104_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23015;old_locus_tag=IXO1104_22995 NZ_CP047492.1 Protein Homology CDS 4921806 4922555 . + 0 ID=cds-WP_011257257.1;Parent=gene-IXO1104_RS23015;Dbxref=Genbank:WP_011257257.1;Name=WP_011257257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302478.1;locus_tag=IXO1104_RS23015;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_011257257.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4922567 4923118 . + . ID=gene-IXO1104_RS23020;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=IXO1104_RS23020;old_locus_tag=IXO1104_23000 NZ_CP047492.1 Protein Homology CDS 4922567 4923118 . + 0 ID=cds-WP_012446379.1;Parent=gene-IXO1104_RS23020;Dbxref=Genbank:WP_012446379.1;Name=WP_012446379.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575276.1;locus_tag=IXO1104_RS23020;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_012446379.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4923115 4923777 . + . ID=gene-IXO1104_RS23025;Name=IXO1104_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23025;old_locus_tag=IXO1104_23005 NZ_CP047492.1 Protein Homology CDS 4923115 4923777 . + 0 ID=cds-WP_011257255.1;Parent=gene-IXO1104_RS23025;Dbxref=Genbank:WP_011257255.1;Name=WP_011257255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482305.1;locus_tag=IXO1104_RS23025;product=ABC transporter substrate-binding protein;protein_id=WP_011257255.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4923767 4924057 . + . ID=gene-IXO1104_RS23030;Name=IXO1104_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23030;old_locus_tag=IXO1104_23010 NZ_CP047492.1 Protein Homology CDS 4923767 4924057 . + 0 ID=cds-WP_011257254.1;Parent=gene-IXO1104_RS23030;Dbxref=Genbank:WP_011257254.1;Name=WP_011257254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257254.1;locus_tag=IXO1104_RS23030;product=STAS domain-containing protein;protein_id=WP_011257254.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4924068 4925126 . + . ID=gene-IXO1104_RS23035;Name=IXO1104_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23035;old_locus_tag=IXO1104_23015 NZ_CP047492.1 Protein Homology CDS 4924068 4925126 . + 0 ID=cds-WP_011257253.1;Parent=gene-IXO1104_RS23035;Dbxref=Genbank:WP_011257253.1;Name=WP_011257253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163758.1;locus_tag=IXO1104_RS23035;product=VacJ family lipoprotein;protein_id=WP_011257253.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4925419 4926795 . - . ID=gene-IXO1104_RS23040;Name=IXO1104_RS23040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23040;old_locus_tag=IXO1104_23020;pseudo=true NZ_CP047492.1 Protein Homology CDS 4925419 4926795 . - 0 ID=cds-IXO1104_RS23040;Parent=gene-IXO1104_RS23040;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS23040;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4926925 4927688 . - . ID=gene-IXO1104_RS23045;Name=IXO1104_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23045;old_locus_tag=IXO1104_23025 NZ_CP047492.1 Protein Homology CDS 4927373 4927688 . - 0 ID=cds-WP_109182012.1;Parent=gene-IXO1104_RS23045;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS23045;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4926925 4927373 . - 2 ID=cds-WP_109182012.1;Parent=gene-IXO1104_RS23045;Dbxref=Genbank:WP_109182012.1;Name=WP_109182012.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=IXO1104_RS23045;product=IS5 family transposase;protein_id=WP_109182012.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4927793 4928753 . + . ID=gene-IXO1104_RS23050;Name=IXO1104_RS23050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23050;old_locus_tag=IXO1104_23030;pseudo=true NZ_CP047492.1 Protein Homology CDS 4927793 4928753 . + 0 ID=cds-IXO1104_RS23050;Parent=gene-IXO1104_RS23050;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1104_RS23050;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4929129 4930085 . + . ID=gene-IXO1104_RS23055;Name=IXO1104_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23055;old_locus_tag=IXO1104_23035 NZ_CP047492.1 Protein Homology CDS 4929129 4930085 . + 0 ID=cds-WP_041182545.1-14;Parent=gene-IXO1104_RS23055;Dbxref=Genbank:WP_041182545.1;Name=WP_041182545.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS23055;product=IS30 family transposase;protein_id=WP_041182545.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4930158 4930973 . - . ID=gene-IXO1104_RS23060;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=IXO1104_RS23060;old_locus_tag=IXO1104_23040 NZ_CP047492.1 Protein Homology CDS 4930158 4930973 . - 0 ID=cds-WP_011407325.1;Parent=gene-IXO1104_RS23060;Dbxref=Genbank:WP_011407325.1;Name=WP_011407325.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439681.1;locus_tag=IXO1104_RS23060;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_011407325.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4931217 4931411 . + . ID=gene-IXO1104_RS23065;Name=IXO1104_RS23065;end_range=4931411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23065;old_locus_tag=IXO1104_23045;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4931217 4931411 . + 0 ID=cds-IXO1104_RS23065;Parent=gene-IXO1104_RS23065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4931411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS23065;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4931497 4931787 . + . ID=gene-IXO1104_RS23070;Name=IXO1104_RS23070;end_range=4931787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23070;old_locus_tag=IXO1104_23050;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4931497 4931787 . + 0 ID=cds-IXO1104_RS23070;Parent=gene-IXO1104_RS23070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4931787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS23070;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4931914 4932956 . + . ID=gene-IXO1104_RS23075;Name=IXO1104_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23075;old_locus_tag=IXO1104_23055 NZ_CP047492.1 Protein Homology CDS 4931914 4932109 . + 0 ID=cds-WP_241846856.1-2;Parent=gene-IXO1104_RS23075;Dbxref=Genbank:WP_241846856.1;Name=WP_241846856.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS23075;product=IS3 family transposase;protein_id=WP_241846856.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4932109 4932956 . + 2 ID=cds-WP_241846856.1-2;Parent=gene-IXO1104_RS23075;Dbxref=Genbank:WP_241846856.1;Name=WP_241846856.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS23075;product=IS3 family transposase;protein_id=WP_241846856.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4933053 4933167 . - . ID=gene-IXO1104_RS23080;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IXO1104_RS23080;old_locus_tag=IXO1104_23060 NZ_CP047492.1 cmsearch rRNA 4933053 4933167 . - . ID=rna-IXO1104_RS23080;Parent=gene-IXO1104_RS23080;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23080;product=5S ribosomal RNA NZ_CP047492.1 cmsearch exon 4933053 4933167 . - . ID=exon-IXO1104_RS23080-1;Parent=rna-IXO1104_RS23080;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23080;product=5S ribosomal RNA NZ_CP047492.1 RefSeq gene 4933341 4936223 . - . ID=gene-IXO1104_RS23085;Name=IXO1104_RS23085;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1104_RS23085;old_locus_tag=IXO1104_23065 NZ_CP047492.1 cmsearch rRNA 4933341 4936223 . - . ID=rna-IXO1104_RS23085;Parent=gene-IXO1104_RS23085;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23085;product=23S ribosomal RNA NZ_CP047492.1 cmsearch exon 4933341 4936223 . - . ID=exon-IXO1104_RS23085-1;Parent=rna-IXO1104_RS23085;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23085;product=23S ribosomal RNA NZ_CP047492.1 RefSeq gene 4936451 4936527 . - . ID=gene-IXO1104_RS23090;Name=IXO1104_RS23090;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS23090;old_locus_tag=IXO1104_23070 NZ_CP047492.1 tRNAscan-SE tRNA 4936451 4936527 . - . ID=rna-IXO1104_RS23090;Parent=gene-IXO1104_RS23090;anticodon=(pos:complement(4936491..4936493));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS23090;product=tRNA-Ile NZ_CP047492.1 tRNAscan-SE exon 4936451 4936527 . - . ID=exon-IXO1104_RS23090-1;Parent=rna-IXO1104_RS23090;anticodon=(pos:complement(4936491..4936493));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS23090;product=tRNA-Ile NZ_CP047492.1 RefSeq gene 4936547 4936622 . - . ID=gene-IXO1104_RS23095;Name=IXO1104_RS23095;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1104_RS23095;old_locus_tag=IXO1104_23075 NZ_CP047492.1 tRNAscan-SE tRNA 4936547 4936622 . - . ID=rna-IXO1104_RS23095;Parent=gene-IXO1104_RS23095;anticodon=(pos:complement(4936587..4936589));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS23095;product=tRNA-Ala NZ_CP047492.1 tRNAscan-SE exon 4936547 4936622 . - . ID=exon-IXO1104_RS23095-1;Parent=rna-IXO1104_RS23095;anticodon=(pos:complement(4936587..4936589));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=IXO1104_RS23095;product=tRNA-Ala NZ_CP047492.1 RefSeq gene 4936716 4938262 . - . ID=gene-IXO1104_RS23100;Name=IXO1104_RS23100;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1104_RS23100;old_locus_tag=IXO1104_23080 NZ_CP047492.1 cmsearch rRNA 4936716 4938262 . - . ID=rna-IXO1104_RS23100;Parent=gene-IXO1104_RS23100;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23100;product=16S ribosomal RNA NZ_CP047492.1 cmsearch exon 4936716 4938262 . - . ID=exon-IXO1104_RS23100-1;Parent=rna-IXO1104_RS23100;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23100;product=16S ribosomal RNA NZ_CP047492.1 RefSeq pseudogene 4939014 4940184 . + . ID=gene-IXO1104_RS23105;Name=IXO1104_RS23105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23105;old_locus_tag=IXO1104_23085;pseudo=true NZ_CP047492.1 Protein Homology CDS 4939014 4940184 . + 0 ID=cds-IXO1104_RS23105;Parent=gene-IXO1104_RS23105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916614.1;locus_tag=IXO1104_RS23105;product=benzoate/H(+) symporter BenE family transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4940293 4942197 . - . ID=gene-IXO1104_RS23110;Name=IXO1104_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23110;old_locus_tag=IXO1104_23090 NZ_CP047492.1 Protein Homology CDS 4940293 4942197 . - 0 ID=cds-WP_011257245.1;Parent=gene-IXO1104_RS23110;Dbxref=Genbank:WP_011257245.1;Name=WP_011257245.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501448.1;locus_tag=IXO1104_RS23110;product=GAF domain-containing protein;protein_id=WP_011257245.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4942194 4942796 . - . ID=gene-IXO1104_RS23115;Name=IXO1104_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23115;old_locus_tag=IXO1104_23095 NZ_CP047492.1 Protein Homology CDS 4942194 4942796 . - 0 ID=cds-WP_011407319.1;Parent=gene-IXO1104_RS23115;Dbxref=Genbank:WP_011407319.1;Name=WP_011407319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501447.1;locus_tag=IXO1104_RS23115;product=biliverdin-producing heme oxygenase;protein_id=WP_011407319.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4942897 4944160 . - . ID=gene-IXO1104_RS23120;Name=IXO1104_RS23120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23120;old_locus_tag=IXO1104_23100;pseudo=true NZ_CP047492.1 Protein Homology CDS 4942897 4944160 . - 0 ID=cds-IXO1104_RS23120;Parent=gene-IXO1104_RS23120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302308.1;locus_tag=IXO1104_RS23120;product=TCR/Tet family MFS transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4944716 4946878 . - . ID=gene-IXO1104_RS23125;Name=IXO1104_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23125;old_locus_tag=IXO1104_23105 NZ_CP047492.1 Protein Homology CDS 4944716 4946878 . - 0 ID=cds-WP_011257243.1;Parent=gene-IXO1104_RS23125;Dbxref=Genbank:WP_011257243.1;Name=WP_011257243.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574667.1;locus_tag=IXO1104_RS23125;product=lytic murein transglycosylase;protein_id=WP_011257243.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4947055 4947129 . + . ID=gene-IXO1104_RS23130;Name=IXO1104_RS23130;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS23130;old_locus_tag=IXO1104_23110 NZ_CP047492.1 cmsearch ncRNA 4947055 4947129 . + . ID=rna-IXO1104_RS23130;Parent=gene-IXO1104_RS23130;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23130;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4947055 4947129 . + . ID=exon-IXO1104_RS23130-1;Parent=rna-IXO1104_RS23130;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23130;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4947172 4947378 . - . ID=gene-IXO1104_RS23135;Name=IXO1104_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23135;old_locus_tag=IXO1104_23115 NZ_CP047492.1 Protein Homology CDS 4947172 4947378 . - 0 ID=cds-WP_011407316.1;Parent=gene-IXO1104_RS23135;Dbxref=Genbank:WP_011407316.1;Name=WP_011407316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154992.1;locus_tag=IXO1104_RS23135;product=hypothetical protein;protein_id=WP_011407316.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4947586 4947975 . - . ID=gene-IXO1104_RS23140;Name=IXO1104_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23140;old_locus_tag=IXO1104_23120 NZ_CP047492.1 Protein Homology CDS 4947586 4947975 . - 0 ID=cds-WP_011257241.1;Parent=gene-IXO1104_RS23140;Dbxref=Genbank:WP_011257241.1;Name=WP_011257241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571430.1;locus_tag=IXO1104_RS23140;product=YchJ family protein;protein_id=WP_011257241.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4948111 4949064 . - . ID=gene-IXO1104_RS23145;Name=IXO1104_RS23145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23145;old_locus_tag=IXO1104_23125;pseudo=true NZ_CP047492.1 Protein Homology CDS 4948111 4949064 . - 0 ID=cds-IXO1104_RS23145;Parent=gene-IXO1104_RS23145;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1104_RS23145;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4949319 4950449 . - . ID=gene-IXO1104_RS23150;Name=IXO1104_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23150;old_locus_tag=IXO1104_23130 NZ_CP047492.1 Protein Homology CDS 4949319 4950449 . - 0 ID=cds-WP_011257239.1;Parent=gene-IXO1104_RS23150;Dbxref=Genbank:WP_011257239.1;Name=WP_011257239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163756.1;locus_tag=IXO1104_RS23150;product=glycoside hydrolase family 5 protein;protein_id=WP_011257239.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4951016 4951092 . + . ID=gene-IXO1104_RS23155;Name=IXO1104_RS23155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS23155;old_locus_tag=IXO1104_23135 NZ_CP047492.1 cmsearch ncRNA 4951016 4951092 . + . ID=rna-IXO1104_RS23155;Parent=gene-IXO1104_RS23155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23155;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4951016 4951092 . + . ID=exon-IXO1104_RS23155-1;Parent=rna-IXO1104_RS23155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23155;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4951097 4952149 . - . ID=gene-IXO1104_RS23160;Name=IXO1104_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23160;old_locus_tag=IXO1104_23140 NZ_CP047492.1 Protein Homology CDS 4951097 4952149 . - 0 ID=cds-WP_011257238.1;Parent=gene-IXO1104_RS23160;Dbxref=Genbank:WP_011257238.1;Name=WP_011257238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375107.1;locus_tag=IXO1104_RS23160;product=glycoside hydrolase family 5 protein;protein_id=WP_011257238.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4952269 4952462 . - . ID=gene-IXO1104_RS23165;Name=IXO1104_RS23165;end_range=4952462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23165;old_locus_tag=IXO1104_23145;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4952269 4952462 . - 0 ID=cds-IXO1104_RS23165;Parent=gene-IXO1104_RS23165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4952462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154987.1;locus_tag=IXO1104_RS23165;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4952912 4953985 . - . ID=gene-IXO1104_RS23170;Name=IXO1104_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23170;old_locus_tag=IXO1104_23150 NZ_CP047492.1 Protein Homology CDS 4952912 4953985 . - 0 ID=cds-WP_011257237.1;Parent=gene-IXO1104_RS23170;Dbxref=Genbank:WP_011257237.1;Name=WP_011257237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345792.1;locus_tag=IXO1104_RS23170;product=glycoside hydrolase family 5 protein;protein_id=WP_011257237.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4954293 4955351 . + . ID=gene-IXO1104_RS23175;Name=IXO1104_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23175;old_locus_tag=IXO1104_23155 NZ_CP047492.1 Protein Homology CDS 4954293 4955351 . + 0 ID=cds-WP_011407313.1;Parent=gene-IXO1104_RS23175;Dbxref=Genbank:WP_011407313.1;Name=WP_011407313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851500.1;locus_tag=IXO1104_RS23175;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_011407313.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4955520 4956480 . - . ID=gene-IXO1104_RS23180;Name=IXO1104_RS23180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23180;old_locus_tag=IXO1104_23160;pseudo=true NZ_CP047492.1 Protein Homology CDS 4955520 4956480 . - 0 ID=cds-IXO1104_RS23180;Parent=gene-IXO1104_RS23180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS23180;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4956605 4956772 . + . ID=gene-IXO1104_RS23185;Name=IXO1104_RS23185;end_range=4956772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23185;old_locus_tag=IXO1104_23165;partial=true;pseudo=true;start_range=.,4956605 NZ_CP047492.1 Protein Homology CDS 4956605 4956772 . + 0 ID=cds-IXO1104_RS23185;Parent=gene-IXO1104_RS23185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4956772,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS23185;partial=true;product=transposase;pseudo=true;start_range=.,4956605;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4956834 4958019 . - . ID=gene-IXO1104_RS23190;Name=IXO1104_RS23190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23190;old_locus_tag=IXO1104_23170;pseudo=true NZ_CP047492.1 Protein Homology CDS 4956834 4958019 . - 0 ID=cds-IXO1104_RS23190;Parent=gene-IXO1104_RS23190;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1104_RS23190;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4958167 4958700 . + . ID=gene-IXO1104_RS23195;Name=IXO1104_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23195;old_locus_tag=IXO1104_23175 NZ_CP047492.1 Protein Homology CDS 4958167 4958700 . + 0 ID=cds-WP_041182826.1;Parent=gene-IXO1104_RS23195;Dbxref=Genbank:WP_041182826.1;Name=WP_041182826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155196.1;locus_tag=IXO1104_RS23195;product=lipocalin family protein;protein_id=WP_041182826.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4958758 4958924 . - . ID=gene-IXO1104_RS23200;Name=IXO1104_RS23200;end_range=4958924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23200;old_locus_tag=IXO1104_23180;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4958758 4958924 . - 0 ID=cds-IXO1104_RS23200;Parent=gene-IXO1104_RS23200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4958924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155195.1;locus_tag=IXO1104_RS23200;partial=true;product=ribonuclease E inhibitor RraB;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4959042 4959638 . + . ID=gene-IXO1104_RS23205;Name=IXO1104_RS23205;end_range=4959638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23205;old_locus_tag=IXO1104_23185;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4959042 4959638 . + 0 ID=cds-IXO1104_RS23205;Parent=gene-IXO1104_RS23205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4959638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS23205;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4959637 4959843 . + . ID=gene-IXO1104_RS23210;Name=IXO1104_RS23210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23210;old_locus_tag=IXO1104_23190;partial=true;pseudo=true;start_range=.,4959637 NZ_CP047492.1 Protein Homology CDS 4959637 4959843 . + 0 ID=cds-IXO1104_RS23210;Parent=gene-IXO1104_RS23210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1104_RS23210;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,4959637;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4959849 4961445 . - . ID=gene-IXO1104_RS23215;Name=IXO1104_RS23215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23215;old_locus_tag=IXO1104_23195;partial=true;pseudo=true;start_range=.,4959849 NZ_CP047492.1 Protein Homology CDS 4959849 4961445 . - 0 ID=cds-IXO1104_RS23215;Parent=gene-IXO1104_RS23215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157370.1;locus_tag=IXO1104_RS23215;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,4959849;transl_table=11 NZ_CP047492.1 RefSeq gene 4961632 4962430 . - . ID=gene-IXO1104_RS23220;Name=IXO1104_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23220;old_locus_tag=IXO1104_23200 NZ_CP047492.1 Protein Homology CDS 4962159 4962430 . - 0 ID=cds-WP_094187728.1-10;Parent=gene-IXO1104_RS23220;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS23220;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 Protein Homology CDS 4961632 4962160 . - 1 ID=cds-WP_094187728.1-10;Parent=gene-IXO1104_RS23220;Dbxref=Genbank:WP_094187728.1;Name=WP_094187728.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS23220;product=IS5 family transposase;protein_id=WP_094187728.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4962588 4963070 . - . ID=gene-IXO1104_RS23225;Name=IXO1104_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23225;old_locus_tag=IXO1104_23205 NZ_CP047492.1 Protein Homology CDS 4962588 4963070 . - 0 ID=cds-WP_011407307.1;Parent=gene-IXO1104_RS23225;Dbxref=Genbank:WP_011407307.1;Name=WP_011407307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912138.1;locus_tag=IXO1104_RS23225;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011407307.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4963198 4964088 . + . ID=gene-IXO1104_RS23230;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=IXO1104_RS23230;old_locus_tag=IXO1104_23210 NZ_CP047492.1 Protein Homology CDS 4963198 4964088 . + 0 ID=cds-WP_011257227.1;Parent=gene-IXO1104_RS23230;Dbxref=Genbank:WP_011257227.1;Name=WP_011257227.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158567.1;locus_tag=IXO1104_RS23230;product=phenylalanine 4-monooxygenase;protein_id=WP_011257227.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4964229 4964873 . + . ID=gene-IXO1104_RS23235;Name=IXO1104_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23235;old_locus_tag=IXO1104_23215 NZ_CP047492.1 Protein Homology CDS 4964229 4964873 . + 0 ID=cds-WP_011257226.1;Parent=gene-IXO1104_RS23235;Dbxref=Genbank:WP_011257226.1;Name=WP_011257226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=IXO1104_RS23235;product=DUF4375 domain-containing protein;protein_id=WP_011257226.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4965095 4965938 . - . ID=gene-IXO1104_RS23240;Name=IXO1104_RS23240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23240;old_locus_tag=IXO1104_23220;pseudo=true NZ_CP047492.1 Protein Homology CDS 4965095 4965938 . - 0 ID=cds-IXO1104_RS23240;Parent=gene-IXO1104_RS23240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345892.1;locus_tag=IXO1104_RS23240;product=GDSL-type esterase/lipase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4966295 4966837 . - . ID=gene-IXO1104_RS23245;Name=IXO1104_RS23245;end_range=4966837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23245;old_locus_tag=IXO1104_23225;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4966295 4966837 . - 0 ID=cds-IXO1104_RS23245;Parent=gene-IXO1104_RS23245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4966837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436974.1;locus_tag=IXO1104_RS23245;partial=true;product=RpiB/LacA/LacB family sugar-phosphate isomerase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4966871 4967972 . - . ID=gene-IXO1104_RS23250;Name=IXO1104_RS23250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23250;old_locus_tag=IXO1104_23230;pseudo=true NZ_CP047492.1 Protein Homology CDS 4966871 4967972 . - 0 ID=cds-IXO1104_RS23250;Parent=gene-IXO1104_RS23250;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1104_RS23250;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4968043 4968486 . + . ID=gene-IXO1104_RS23255;Name=IXO1104_RS23255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23255;old_locus_tag=IXO1104_23235;partial=true;pseudo=true;start_range=.,4968043 NZ_CP047492.1 Protein Homology CDS 4968043 4968486 . + 0 ID=cds-IXO1104_RS23255;Parent=gene-IXO1104_RS23255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1104_RS23255;partial=true;product=IS5-like element ISXo3 family transposase;pseudo=true;start_range=.,4968043;transl_table=11 NZ_CP047492.1 RefSeq gene 4968473 4968619 . - . ID=gene-IXO1104_RS23260;Name=IXO1104_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23260;old_locus_tag=IXO1104_23240 NZ_CP047492.1 GeneMarkS-2+ CDS 4968473 4968619 . - 0 ID=cds-WP_012446412.1;Parent=gene-IXO1104_RS23260;Dbxref=Genbank:WP_012446412.1;Name=WP_012446412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23260;product=hypothetical protein;protein_id=WP_012446412.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4968653 4968955 . - . ID=gene-IXO1104_RS23265;Name=IXO1104_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23265;old_locus_tag=IXO1104_23245 NZ_CP047492.1 Protein Homology CDS 4968653 4968955 . - 0 ID=cds-WP_075239755.1;Parent=gene-IXO1104_RS23265;Dbxref=Genbank:WP_075239755.1;Name=WP_075239755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505307.1;locus_tag=IXO1104_RS23265;product=hypothetical protein;protein_id=WP_075239755.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4969101 4969904 . - . ID=gene-IXO1104_RS23270;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=IXO1104_RS23270;old_locus_tag=IXO1104_23250 NZ_CP047492.1 Protein Homology CDS 4969101 4969904 . - 0 ID=cds-WP_011260799.1;Parent=gene-IXO1104_RS23270;Dbxref=Genbank:WP_011260799.1;Name=WP_011260799.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260799.1;locus_tag=IXO1104_RS23270;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_011260799.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4969966 4970994 . - . ID=gene-IXO1104_RS23275;Name=IXO1104_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23275;old_locus_tag=IXO1104_23255 NZ_CP047492.1 Protein Homology CDS 4969966 4970994 . - 0 ID=cds-WP_011260800.1;Parent=gene-IXO1104_RS23275;Dbxref=Genbank:WP_011260800.1;Name=WP_011260800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345999.1;locus_tag=IXO1104_RS23275;product=NADP-dependent oxidoreductase;protein_id=WP_011260800.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4971133 4972104 . - . ID=gene-IXO1104_RS23280;Name=IXO1104_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23280;old_locus_tag=IXO1104_23260 NZ_CP047492.1 Protein Homology CDS 4971133 4972104 . - 0 ID=cds-WP_011260801.1;Parent=gene-IXO1104_RS23280;Dbxref=Genbank:WP_011260801.1;Name=WP_011260801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379903.1;locus_tag=IXO1104_RS23280;product=aldo/keto reductase;protein_id=WP_011260801.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4972337 4973191 . + . ID=gene-IXO1104_RS23285;Name=IXO1104_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23285;old_locus_tag=IXO1104_23265 NZ_CP047492.1 Protein Homology CDS 4972337 4973191 . + 0 ID=cds-WP_011409786.1;Parent=gene-IXO1104_RS23285;Dbxref=Genbank:WP_011409786.1;Name=WP_011409786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912328.1;locus_tag=IXO1104_RS23285;product=class I SAM-dependent methyltransferase;protein_id=WP_011409786.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4973284 4973856 . + . ID=gene-IXO1104_RS23290;Name=IXO1104_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23290;old_locus_tag=IXO1104_23270 NZ_CP047492.1 Protein Homology CDS 4973284 4973856 . + 0 ID=cds-WP_011409787.1;Parent=gene-IXO1104_RS23290;Dbxref=Genbank:WP_011409787.1;Name=WP_011409787.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156080.1;locus_tag=IXO1104_RS23290;product=pseudouridine synthase;protein_id=WP_011409787.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4973878 4974072 . + . ID=gene-IXO1104_RS23295;Name=IXO1104_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23295;old_locus_tag=IXO1104_23275 NZ_CP047492.1 Protein Homology CDS 4973878 4974072 . + 0 ID=cds-WP_027703413.1;Parent=gene-IXO1104_RS23295;Dbxref=Genbank:WP_027703413.1;Name=WP_027703413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302416.1;locus_tag=IXO1104_RS23295;product=hypothetical protein;protein_id=WP_027703413.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4974179 4974619 . - . ID=gene-IXO1104_RS23300;Name=IXO1104_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23300;old_locus_tag=IXO1104_23280 NZ_CP047492.1 Protein Homology CDS 4974179 4974619 . - 0 ID=cds-WP_011260804.1;Parent=gene-IXO1104_RS23300;Dbxref=Genbank:WP_011260804.1;Name=WP_011260804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160523.1;locus_tag=IXO1104_RS23300;product=hypothetical protein;protein_id=WP_011260804.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4974782 4977283 . - . ID=gene-IXO1104_RS23305;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=IXO1104_RS23305;old_locus_tag=IXO1104_23285 NZ_CP047492.1 Protein Homology CDS 4974782 4977283 . - 0 ID=cds-WP_011409789.1;Parent=gene-IXO1104_RS23305;Dbxref=Genbank:WP_011409789.1;Name=WP_011409789.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050223.1;locus_tag=IXO1104_RS23305;product=ATP-dependent helicase HrpB;protein_id=WP_011409789.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4977972 4978445 . - . ID=gene-IXO1104_RS23310;Name=IXO1104_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23310;old_locus_tag=IXO1104_23290 NZ_CP047492.1 Protein Homology CDS 4977972 4978445 . - 0 ID=cds-WP_011260806.1;Parent=gene-IXO1104_RS23310;Dbxref=Genbank:WP_011260806.1;Name=WP_011260806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505316.1;locus_tag=IXO1104_RS23310;product=DUF1456 family protein;protein_id=WP_011260806.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4978758 4980077 . - . ID=gene-IXO1104_RS23315;Name=IXO1104_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23315;old_locus_tag=IXO1104_23295 NZ_CP047492.1 Protein Homology CDS 4978758 4980077 . - 0 ID=cds-WP_011260807.1;Parent=gene-IXO1104_RS23315;Dbxref=Genbank:WP_011260807.1;Name=WP_011260807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374394.1;locus_tag=IXO1104_RS23315;product=L-fuconate dehydratase;protein_id=WP_011260807.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4980571 4981428 . - . ID=gene-IXO1104_RS23320;Name=IXO1104_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23320;old_locus_tag=IXO1104_23300 NZ_CP047492.1 Protein Homology CDS 4980571 4981428 . - 0 ID=cds-WP_011260808.1;Parent=gene-IXO1104_RS23320;Dbxref=Genbank:WP_011260808.1;Name=WP_011260808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966483.1;locus_tag=IXO1104_RS23320;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011260808.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4981598 4982368 . - . ID=gene-IXO1104_RS23325;Name=IXO1104_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23325;old_locus_tag=IXO1104_23305 NZ_CP047492.1 Protein Homology CDS 4981598 4982368 . - 0 ID=cds-WP_011260809.1;Parent=gene-IXO1104_RS23325;Dbxref=Genbank:WP_011260809.1;Name=WP_011260809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439611.1;locus_tag=IXO1104_RS23325;product=SDR family oxidoreductase;protein_id=WP_011260809.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4982365 4983237 . - . ID=gene-IXO1104_RS23330;Name=IXO1104_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23330;old_locus_tag=IXO1104_23310 NZ_CP047492.1 Protein Homology CDS 4982365 4983237 . - 0 ID=cds-WP_011260810.1;Parent=gene-IXO1104_RS23330;Dbxref=Genbank:WP_011260810.1;Name=WP_011260810.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930619.1;locus_tag=IXO1104_RS23330;product=amidohydrolase family protein;protein_id=WP_011260810.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4983234 4984244 . - . ID=gene-IXO1104_RS23335;Name=IXO1104_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23335;old_locus_tag=IXO1104_23315 NZ_CP047492.1 Protein Homology CDS 4983234 4984244 . - 0 ID=cds-WP_053502603.1;Parent=gene-IXO1104_RS23335;Dbxref=Genbank:WP_053502603.1;Name=WP_053502603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349045.1;locus_tag=IXO1104_RS23335;product=aldo/keto reductase;protein_id=WP_053502603.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4984241 4984435 . - . ID=gene-IXO1104_RS23340;Name=IXO1104_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23340 NZ_CP047492.1 Protein Homology CDS 4984241 4984435 . - 0 ID=cds-WP_228383577.1;Parent=gene-IXO1104_RS23340;Dbxref=Genbank:WP_228383577.1;Name=WP_228383577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158476.1;locus_tag=IXO1104_RS23340;product=hypothetical protein;protein_id=WP_228383577.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4984356 4984523 . + . ID=gene-IXO1104_RS23345;Name=IXO1104_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23345;old_locus_tag=IXO1104_23320 NZ_CP047492.1 Protein Homology CDS 4984356 4984523 . + 0 ID=cds-WP_012446418.1;Parent=gene-IXO1104_RS23345;Dbxref=Genbank:WP_012446418.1;Name=WP_012446418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575998.1;locus_tag=IXO1104_RS23345;product=hypothetical protein;protein_id=WP_012446418.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4984557 4985651 . + . ID=gene-IXO1104_RS23350;Name=IXO1104_RS23350;end_range=4985651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23350;old_locus_tag=IXO1104_23325;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4984557 4985651 . + 0 ID=cds-IXO1104_RS23350;Parent=gene-IXO1104_RS23350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553;end_range=4985651,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575997.1;locus_tag=IXO1104_RS23350;partial=true;product=family 43 glycosylhydrolase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4985788 4985991 . - . ID=gene-IXO1104_RS23355;Name=IXO1104_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23355;old_locus_tag=IXO1104_23330 NZ_CP047492.1 Protein Homology CDS 4985788 4985991 . - 0 ID=cds-WP_012446420.1;Parent=gene-IXO1104_RS23355;Dbxref=Genbank:WP_012446420.1;Name=WP_012446420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849177.1;locus_tag=IXO1104_RS23355;product=hypothetical protein;protein_id=WP_012446420.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4985934 4986434 . + . ID=gene-IXO1104_RS23360;Name=IXO1104_RS23360;end_range=4986434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23360;old_locus_tag=IXO1104_23335;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 4985934 4986434 . + 0 ID=cds-IXO1104_RS23360;Parent=gene-IXO1104_RS23360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4986434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914582.1;locus_tag=IXO1104_RS23360;partial=true;product=DUF4424 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4986428 4986503 . - . ID=gene-IXO1104_RS23365;Name=IXO1104_RS23365;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS23365;old_locus_tag=IXO1104_23340 NZ_CP047492.1 cmsearch ncRNA 4986428 4986503 . - . ID=rna-IXO1104_RS23365;Parent=gene-IXO1104_RS23365;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23365;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4986428 4986503 . - . ID=exon-IXO1104_RS23365-1;Parent=rna-IXO1104_RS23365;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23365;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 4986907 4987575 . - . ID=gene-IXO1104_RS23370;Name=IXO1104_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23370;old_locus_tag=IXO1104_23345 NZ_CP047492.1 Protein Homology CDS 4986907 4987575 . - 0 ID=cds-WP_011409794.1;Parent=gene-IXO1104_RS23370;Dbxref=Genbank:WP_011409794.1;Name=WP_011409794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156036.1;locus_tag=IXO1104_RS23370;product=response regulator transcription factor;protein_id=WP_011409794.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4987837 4989780 . - . ID=gene-IXO1104_RS23375;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=IXO1104_RS23375;old_locus_tag=IXO1104_23350 NZ_CP047492.1 Protein Homology CDS 4987837 4989780 . - 0 ID=cds-WP_011409795.1;Parent=gene-IXO1104_RS23375;Dbxref=Genbank:WP_011409795.1;Name=WP_011409795.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466986.1;locus_tag=IXO1104_RS23375;product=acetate--CoA ligase;protein_id=WP_011409795.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 4990078 4991477 . + . ID=gene-IXO1104_RS23380;Name=IXO1104_RS23380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23380;old_locus_tag=IXO1104_23360;pseudo=true NZ_CP047492.1 Protein Homology CDS 4990078 4991477 . + 0 ID=cds-IXO1104_RS23380;Parent=gene-IXO1104_RS23380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575984.1;locus_tag=IXO1104_RS23380;product=DcaP family trimeric outer membrane transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 4991564 4991881 . + . ID=gene-IXO1104_RS23385;Name=IXO1104_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23385;old_locus_tag=IXO1104_23365 NZ_CP047492.1 Protein Homology CDS 4991564 4991881 . + 0 ID=cds-WP_011409798.1;Parent=gene-IXO1104_RS23385;Dbxref=Genbank:WP_011409798.1;Name=WP_011409798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451668.1;locus_tag=IXO1104_RS23385;product=DUF485 domain-containing protein;protein_id=WP_011409798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4991878 4993605 . + . ID=gene-IXO1104_RS23390;Name=IXO1104_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23390;old_locus_tag=IXO1104_23370 NZ_CP047492.1 Protein Homology CDS 4991878 4993605 . + 0 ID=cds-WP_011260819.1;Parent=gene-IXO1104_RS23390;Dbxref=Genbank:WP_011260819.1;Name=WP_011260819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304713.1;locus_tag=IXO1104_RS23390;product=cation acetate symporter;protein_id=WP_011260819.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4994065 4994141 . - . ID=gene-IXO1104_RS23395;Name=IXO1104_RS23395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS23395;old_locus_tag=IXO1104_23375 NZ_CP047492.1 cmsearch ncRNA 4994065 4994141 . - . ID=rna-IXO1104_RS23395;Parent=gene-IXO1104_RS23395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23395;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 4994065 4994141 . - . ID=exon-IXO1104_RS23395-1;Parent=rna-IXO1104_RS23395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23395;product=sX9 sRNA NZ_CP047492.1 RefSeq pseudogene 4994216 4994865 . - . ID=gene-IXO1104_RS23400;Name=IXO1104_RS23400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23400;old_locus_tag=IXO1104_23380;partial=true;pseudo=true;start_range=.,4994216 NZ_CP047492.1 Protein Homology CDS 4994216 4994865 . - 0 ID=cds-IXO1104_RS23400;Parent=gene-IXO1104_RS23400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159738.1;locus_tag=IXO1104_RS23400;partial=true;product=ROK family protein;pseudo=true;start_range=.,4994216;transl_table=11 NZ_CP047492.1 RefSeq gene 4995271 4996050 . + . ID=gene-IXO1104_RS23405;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=IXO1104_RS23405;old_locus_tag=IXO1104_23385 NZ_CP047492.1 Protein Homology CDS 4995271 4996050 . + 0 ID=cds-WP_011260821.1;Parent=gene-IXO1104_RS23405;Dbxref=Genbank:WP_011260821.1;Name=WP_011260821.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995484.1;locus_tag=IXO1104_RS23405;product=exodeoxyribonuclease III;protein_id=WP_011260821.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4996047 4996484 . + . ID=gene-IXO1104_RS23410;Name=IXO1104_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23410;old_locus_tag=IXO1104_23390 NZ_CP047492.1 Protein Homology CDS 4996047 4996484 . + 0 ID=cds-WP_011409800.1;Parent=gene-IXO1104_RS23410;Dbxref=Genbank:WP_011409800.1;Name=WP_011409800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409800.1;locus_tag=IXO1104_RS23410;product=GFA family protein;protein_id=WP_011409800.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4996546 4996797 . - . ID=gene-IXO1104_RS23415;Name=IXO1104_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23415;old_locus_tag=IXO1104_23395 NZ_CP047492.1 Protein Homology CDS 4996546 4996797 . - 0 ID=cds-WP_011409801.1;Parent=gene-IXO1104_RS23415;Dbxref=Genbank:WP_011409801.1;Name=WP_011409801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409801.1;locus_tag=IXO1104_RS23415;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011409801.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4996924 4997520 . + . ID=gene-IXO1104_RS23420;Name=IXO1104_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23420;old_locus_tag=IXO1104_23400 NZ_CP047492.1 Protein Homology CDS 4996924 4997520 . + 0 ID=cds-WP_011260824.1;Parent=gene-IXO1104_RS23420;Dbxref=Genbank:WP_011260824.1;Name=WP_011260824.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575969.1;locus_tag=IXO1104_RS23420;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_011260824.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4997539 4999110 . - . ID=gene-IXO1104_RS23425;Name=IXO1104_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23425;old_locus_tag=IXO1104_23405 NZ_CP047492.1 Protein Homology CDS 4997539 4999110 . - 0 ID=cds-WP_075239753.1;Parent=gene-IXO1104_RS23425;Dbxref=Genbank:WP_075239753.1;Name=WP_075239753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501577.1;locus_tag=IXO1104_RS23425;product=alkaline phosphatase D family protein;protein_id=WP_075239753.1;transl_table=11 NZ_CP047492.1 RefSeq gene 4999296 5000924 . - . ID=gene-IXO1104_RS23430;Name=IXO1104_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23430;old_locus_tag=IXO1104_23410 NZ_CP047492.1 Protein Homology CDS 4999296 5000924 . - 0 ID=cds-WP_075239756.1;Parent=gene-IXO1104_RS23430;Dbxref=Genbank:WP_075239756.1;Name=WP_075239756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901821.1;locus_tag=IXO1104_RS23430;product=alkaline phosphatase D family protein;protein_id=WP_075239756.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5001147 5001785 . + . ID=gene-IXO1104_RS23435;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=IXO1104_RS23435;old_locus_tag=IXO1104_23415 NZ_CP047492.1 Protein Homology CDS 5001147 5001785 . + 0 ID=cds-WP_011260827.1;Parent=gene-IXO1104_RS23435;Dbxref=Genbank:WP_011260827.1;Name=WP_011260827.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995473.1;locus_tag=IXO1104_RS23435;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_011260827.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5002139 5002629 . + . ID=gene-IXO1104_RS23440;Name=IXO1104_RS23440;end_range=5002629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23440;old_locus_tag=IXO1104_23420;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 5002139 5002629 . + 0 ID=cds-IXO1104_RS23440;Parent=gene-IXO1104_RS23440;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5002629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575963.1;locus_tag=IXO1104_RS23440;partial=true;product=DUF885 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5003074 5003433 . + . ID=gene-IXO1104_RS23445;Name=IXO1104_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23445;old_locus_tag=IXO1104_23425 NZ_CP047492.1 GeneMarkS-2+ CDS 5003074 5003433 . + 0 ID=cds-WP_044757251.1;Parent=gene-IXO1104_RS23445;Dbxref=Genbank:WP_044757251.1;Name=WP_044757251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23445;product=hypothetical protein;protein_id=WP_044757251.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5003618 5003854 . + . ID=gene-IXO1104_RS23450;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=IXO1104_RS23450;old_locus_tag=IXO1104_23430 NZ_CP047492.1 Protein Homology CDS 5003618 5003854 . + 0 ID=cds-WP_002809459.1;Parent=gene-IXO1104_RS23450;Dbxref=Genbank:WP_002809459.1;Name=WP_002809459.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=IXO1104_RS23450;product=50S ribosomal protein L28;protein_id=WP_002809459.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5003868 5004035 . + . ID=gene-IXO1104_RS23455;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=IXO1104_RS23455;old_locus_tag=IXO1104_23435 NZ_CP047492.1 Protein Homology CDS 5003868 5004035 . + 0 ID=cds-WP_002809462.1;Parent=gene-IXO1104_RS23455;Dbxref=Genbank:WP_002809462.1;Name=WP_002809462.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=IXO1104_RS23455;product=50S ribosomal protein L33;protein_id=WP_002809462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5004468 5005490 . - . ID=gene-IXO1104_RS23460;Name=IXO1104_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23460;old_locus_tag=IXO1104_23440 NZ_CP047492.1 Protein Homology CDS 5004468 5005490 . - 0 ID=cds-WP_075239752.1;Parent=gene-IXO1104_RS23460;Dbxref=Genbank:WP_075239752.1;Name=WP_075239752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572519.1;locus_tag=IXO1104_RS23460;product=amidohydrolase;protein_id=WP_075239752.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5005814 5006770 . + . ID=gene-IXO1104_RS23465;Name=IXO1104_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23465;old_locus_tag=IXO1104_23445 NZ_CP047492.1 Protein Homology CDS 5005814 5006770 . + 0 ID=cds-WP_041182719.1-6;Parent=gene-IXO1104_RS23465;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS23465;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5006780 5007832 . - . ID=gene-IXO1104_RS23470;Name=IXO1104_RS23470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23470;old_locus_tag=IXO1104_23450;partial=true;pseudo=true;start_range=.,5006780 NZ_CP047492.1 Protein Homology CDS 5006780 5007832 . - 0 ID=cds-IXO1104_RS23470;Parent=gene-IXO1104_RS23470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091428.1;locus_tag=IXO1104_RS23470;partial=true;product=4-oxalomesaconate tautomerase;pseudo=true;start_range=.,5006780;transl_table=11 NZ_CP047492.1 RefSeq gene 5007825 5008496 . - . ID=gene-IXO1104_RS23475;Name=IXO1104_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23475;old_locus_tag=IXO1104_23455 NZ_CP047492.1 Protein Homology CDS 5007825 5008496 . - 0 ID=cds-WP_011260832.1;Parent=gene-IXO1104_RS23475;Dbxref=Genbank:WP_011260832.1;Name=WP_011260832.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489876.1;locus_tag=IXO1104_RS23475;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_011260832.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5008594 5009901 . + . ID=gene-IXO1104_RS23480;Name=IXO1104_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23480;old_locus_tag=IXO1104_23460 NZ_CP047492.1 Protein Homology CDS 5008594 5009901 . + 0 ID=cds-WP_011260833.1;Parent=gene-IXO1104_RS23480;Dbxref=Genbank:WP_011260833.1;Name=WP_011260833.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157746.1;locus_tag=IXO1104_RS23480;product=LysR family transcriptional regulator;protein_id=WP_011260833.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5009918 5011336 . + . ID=gene-IXO1104_RS23485;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=IXO1104_RS23485;old_locus_tag=IXO1104_23465 NZ_CP047492.1 Protein Homology CDS 5009918 5011336 . + 0 ID=cds-WP_012446434.1;Parent=gene-IXO1104_RS23485;Dbxref=Genbank:WP_012446434.1;Name=WP_012446434.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902730.1;locus_tag=IXO1104_RS23485;product=cardiolipin synthase;protein_id=WP_012446434.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5011407 5011741 . - . ID=gene-IXO1104_RS23490;Name=IXO1104_RS23490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23490;pseudo=true NZ_CP047492.1 Protein Homology CDS 5011407 5011741 . - 0 ID=cds-IXO1104_RS23490;Parent=gene-IXO1104_RS23490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301189.1;locus_tag=IXO1104_RS23490;product=glyoxalase/bleomycin resistance/dioxygenase family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5011908 5013302 . + . ID=gene-IXO1104_RS23495;Name=IXO1104_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23495;old_locus_tag=IXO1104_23475 NZ_CP047492.1 Protein Homology CDS 5011908 5013302 . + 0 ID=cds-WP_012446436.1;Parent=gene-IXO1104_RS23495;Dbxref=Genbank:WP_012446436.1;Name=WP_012446436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446436.1;locus_tag=IXO1104_RS23495;product=FAD/NAD(P)-binding protein;protein_id=WP_012446436.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5013650 5015836 . + . ID=gene-IXO1104_RS23500;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=IXO1104_RS23500;old_locus_tag=IXO1104_23480 NZ_CP047492.1 Protein Homology CDS 5013650 5015836 . + 0 ID=cds-WP_012446437.1;Parent=gene-IXO1104_RS23500;Dbxref=Genbank:WP_012446437.1;Name=WP_012446437.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809467.1;locus_tag=IXO1104_RS23500;product=DNA helicase II;protein_id=WP_012446437.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5016012 5016236 . - . ID=gene-IXO1104_RS23505;Name=IXO1104_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23505;old_locus_tag=IXO1104_23485 NZ_CP047492.1 Protein Homology CDS 5016012 5016236 . - 0 ID=cds-WP_012446438.1;Parent=gene-IXO1104_RS23505;Dbxref=Genbank:WP_012446438.1;Name=WP_012446438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373694.1;locus_tag=IXO1104_RS23505;product=hypothetical protein;protein_id=WP_012446438.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5016645 5016788 . + . ID=gene-IXO1104_RS23510;Name=IXO1104_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23510;old_locus_tag=IXO1104_23490 NZ_CP047492.1 GeneMarkS-2+ CDS 5016645 5016788 . + 0 ID=cds-WP_153296785.1;Parent=gene-IXO1104_RS23510;Dbxref=Genbank:WP_153296785.1;Name=WP_153296785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23510;product=hypothetical protein;protein_id=WP_153296785.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5016817 5017782 . - . ID=gene-IXO1104_RS23515;Name=IXO1104_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23515;old_locus_tag=IXO1104_23495 NZ_CP047492.1 Protein Homology CDS 5016817 5017782 . - 0 ID=cds-WP_109182061.1;Parent=gene-IXO1104_RS23515;Dbxref=Genbank:WP_109182061.1;Name=WP_109182061.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1104_RS23515;product=IS1595 family transposase;protein_id=WP_109182061.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5017958 5019373 . - . ID=gene-IXO1104_RS23520;Name=IXO1104_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23520;old_locus_tag=IXO1104_23500 NZ_CP047492.1 Protein Homology CDS 5017958 5019373 . - 0 ID=cds-WP_027704006.1;Parent=gene-IXO1104_RS23520;Dbxref=Genbank:WP_027704006.1;Name=WP_027704006.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482277.1;locus_tag=IXO1104_RS23520;product=amino acid permease;protein_id=WP_027704006.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5019852 5020502 . + . ID=gene-IXO1104_RS23525;Name=IXO1104_RS23525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23525;old_locus_tag=IXO1104_23505;partial=true;pseudo=true;start_range=.,5019852 NZ_CP047492.1 Protein Homology CDS 5019852 5020502 . + 0 ID=cds-IXO1104_RS23525;Parent=gene-IXO1104_RS23525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006113,GO:0004024,GO:0008270;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573087.1;locus_tag=IXO1104_RS23525;partial=true;product=zinc-binding alcohol dehydrogenase family protein;pseudo=true;start_range=.,5019852;transl_table=11 NZ_CP047492.1 RefSeq gene 5020687 5022183 . + . ID=gene-IXO1104_RS23530;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=IXO1104_RS23530;old_locus_tag=IXO1104_23510 NZ_CP047492.1 Protein Homology CDS 5020687 5022183 . + 0 ID=cds-WP_178385564.1;Parent=gene-IXO1104_RS23530;Dbxref=Genbank:WP_178385564.1;Name=WP_178385564.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409813.1;locus_tag=IXO1104_RS23530;product=DNA recombination protein RmuC;protein_id=WP_178385564.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5022589 5022951 . + . ID=gene-IXO1104_RS23535;Name=IXO1104_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23535;old_locus_tag=IXO1104_23515 NZ_CP047492.1 Protein Homology CDS 5022589 5022951 . + 0 ID=cds-WP_041182970.1;Parent=gene-IXO1104_RS23535;Dbxref=Genbank:WP_041182970.1;Name=WP_041182970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349194.1;locus_tag=IXO1104_RS23535;product=hypothetical protein;protein_id=WP_041182970.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5023329 5023874 . + . ID=gene-IXO1104_RS23540;Name=IXO1104_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23540;old_locus_tag=IXO1104_23520 NZ_CP047492.1 Protein Homology CDS 5023329 5023874 . + 0 ID=cds-WP_011409815.1;Parent=gene-IXO1104_RS23540;Dbxref=Genbank:WP_011409815.1;Name=WP_011409815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409815.1;locus_tag=IXO1104_RS23540;product=glutathione peroxidase;protein_id=WP_011409815.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5023970 5025346 . - . ID=gene-IXO1104_RS23545;Name=IXO1104_RS23545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23545;old_locus_tag=IXO1104_23525;pseudo=true NZ_CP047492.1 Protein Homology CDS 5023970 5025346 . - 0 ID=cds-IXO1104_RS23545;Parent=gene-IXO1104_RS23545;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS23545;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5025536 5026855 . + . ID=gene-IXO1104_RS23550;Name=IXO1104_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23550;old_locus_tag=IXO1104_23530 NZ_CP047492.1 Protein Homology CDS 5025536 5026855 . + 0 ID=cds-WP_164994166.1;Parent=gene-IXO1104_RS23550;Dbxref=Genbank:WP_164994166.1;Name=WP_164994166.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS23550;product=IS701 family transposase;protein_id=WP_164994166.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5027128 5028255 . - . ID=gene-IXO1104_RS23555;Name=IXO1104_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23555;old_locus_tag=IXO1104_23535 NZ_CP047492.1 Protein Homology CDS 5027128 5028255 . - 0 ID=cds-WP_011260845.1;Parent=gene-IXO1104_RS23555;Dbxref=Genbank:WP_011260845.1;Name=WP_011260845.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088871.1;locus_tag=IXO1104_RS23555;product=PA0069 family radical SAM protein;protein_id=WP_011260845.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5028511 5028822 . - . ID=gene-IXO1104_RS23560;Name=IXO1104_RS23560;end_range=5028822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23560;old_locus_tag=IXO1104_23540;partial=true;pseudo=true;start_range=.,5028511 NZ_CP047492.1 Protein Homology CDS 5028511 5028822 . - 0 ID=cds-IXO1104_RS23560;Parent=gene-IXO1104_RS23560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5028822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482181.1;locus_tag=IXO1104_RS23560;partial=true;product=2OG-Fe(II) oxygenase;pseudo=true;start_range=.,5028511;transl_table=11 NZ_CP047492.1 RefSeq gene 5029181 5030521 . - . ID=gene-IXO1104_RS23565;Name=IXO1104_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23565;old_locus_tag=IXO1104_23545 NZ_CP047492.1 Protein Homology CDS 5029181 5030521 . - 0 ID=cds-WP_011409820.1;Parent=gene-IXO1104_RS23565;Dbxref=Genbank:WP_011409820.1;Name=WP_011409820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968187.1;locus_tag=IXO1104_RS23565;product=outer membrane protein transport protein;protein_id=WP_011409820.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5030738 5031430 . + . ID=gene-IXO1104_RS23570;Name=IXO1104_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23570;old_locus_tag=IXO1104_23550 NZ_CP047492.1 Protein Homology CDS 5030738 5031430 . + 0 ID=cds-WP_011409821.1;Parent=gene-IXO1104_RS23570;Dbxref=Genbank:WP_011409821.1;Name=WP_011409821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1;locus_tag=IXO1104_RS23570;product=rhomboid family intramembrane serine protease;protein_id=WP_011409821.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5031547 5031867 . + . ID=gene-IXO1104_RS23575;Name=IXO1104_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23575;old_locus_tag=IXO1104_23555 NZ_CP047492.1 Protein Homology CDS 5031547 5031867 . + 0 ID=cds-WP_011409822.1;Parent=gene-IXO1104_RS23575;Dbxref=Genbank:WP_011409822.1;Name=WP_011409822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1;locus_tag=IXO1104_RS23575;product=DUF1820 family protein;protein_id=WP_011409822.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5031867 5032859 . + . ID=gene-IXO1104_RS23580;Name=IXO1104_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23580;old_locus_tag=IXO1104_23560 NZ_CP047492.1 Protein Homology CDS 5031867 5032859 . + 0 ID=cds-WP_011260850.1;Parent=gene-IXO1104_RS23580;Dbxref=Genbank:WP_011260850.1;Name=WP_011260850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482169.1;locus_tag=IXO1104_RS23580;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_011260850.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5033085 5033161 . + . ID=gene-IXO1104_RS23585;Name=IXO1104_RS23585;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1104_RS23585;old_locus_tag=IXO1104_23565 NZ_CP047492.1 cmsearch ncRNA 5033085 5033161 . + . ID=rna-IXO1104_RS23585;Parent=gene-IXO1104_RS23585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23585;product=sX9 sRNA NZ_CP047492.1 cmsearch exon 5033085 5033161 . + . ID=exon-IXO1104_RS23585-1;Parent=rna-IXO1104_RS23585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1104_RS23585;product=sX9 sRNA NZ_CP047492.1 RefSeq gene 5033166 5034689 . - . ID=gene-IXO1104_RS23590;Name=IXO1104_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23590;old_locus_tag=IXO1104_23570 NZ_CP047492.1 Protein Homology CDS 5033166 5034689 . - 0 ID=cds-WP_011409823.1;Parent=gene-IXO1104_RS23590;Dbxref=Genbank:WP_011409823.1;Name=WP_011409823.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376383.1;locus_tag=IXO1104_RS23590;product=S41 family peptidase;protein_id=WP_011409823.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5034794 5036092 . - . ID=gene-IXO1104_RS23595;Name=IXO1104_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23595;old_locus_tag=IXO1104_23575 NZ_CP047492.1 Protein Homology CDS 5034794 5036092 . - 0 ID=cds-WP_027703885.1;Parent=gene-IXO1104_RS23595;Dbxref=Genbank:WP_027703885.1;Name=WP_027703885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850464.1;locus_tag=IXO1104_RS23595;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_027703885.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5036190 5036846 . + . ID=gene-IXO1104_RS23600;Name=IXO1104_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23600;old_locus_tag=IXO1104_23580 NZ_CP047492.1 Protein Homology CDS 5036190 5036846 . + 0 ID=cds-WP_027703884.1;Parent=gene-IXO1104_RS23600;Dbxref=Genbank:WP_027703884.1;Name=WP_027703884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260853.1;locus_tag=IXO1104_RS23600;product=hypothetical protein;protein_id=WP_027703884.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5036997 5038808 . + . ID=gene-IXO1104_RS23605;Name=IXO1104_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23605;old_locus_tag=IXO1104_23585 NZ_CP047492.1 Protein Homology CDS 5036997 5038808 . + 0 ID=cds-WP_012446450.1;Parent=gene-IXO1104_RS23605;Dbxref=Genbank:WP_012446450.1;Name=WP_012446450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118134.1;locus_tag=IXO1104_RS23605;product=M28 family metallopeptidase;protein_id=WP_012446450.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5038965 5039306 . - . ID=gene-IXO1104_RS23610;Name=IXO1104_RS23610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23610;old_locus_tag=IXO1104_23590;partial=true;pseudo=true;start_range=.,5038965 NZ_CP047492.1 Protein Homology CDS 5038965 5039306 . - 0 ID=cds-IXO1104_RS23610;Parent=gene-IXO1104_RS23610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166071.1;locus_tag=IXO1104_RS23610;partial=true;product=PepSY domain-containing protein;pseudo=true;start_range=.,5038965;transl_table=11 NZ_CP047492.1 RefSeq gene 5039485 5040804 . - . ID=gene-IXO1104_RS23615;Name=IXO1104_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23615;old_locus_tag=IXO1104_23595 NZ_CP047492.1 Protein Homology CDS 5039485 5040804 . - 0 ID=cds-WP_115801894.1;Parent=gene-IXO1104_RS23615;Dbxref=Genbank:WP_115801894.1;Name=WP_115801894.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1104_RS23615;product=IS701 family transposase;protein_id=WP_115801894.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5040994 5042169 . + . ID=gene-IXO1104_RS23620;Name=IXO1104_RS23620;end_range=5042169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23620;old_locus_tag=IXO1104_23600;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 5040994 5042169 . + 0 ID=cds-IXO1104_RS23620;Parent=gene-IXO1104_RS23620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5042169,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1104_RS23620;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5042217 5043398 . - . ID=gene-IXO1104_RS23625;Name=IXO1104_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23625;old_locus_tag=IXO1104_23605 NZ_CP047492.1 Protein Homology CDS 5042217 5043398 . - 0 ID=cds-WP_027703798.1;Parent=gene-IXO1104_RS23625;Dbxref=Genbank:WP_027703798.1;Name=WP_027703798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112489.1;locus_tag=IXO1104_RS23625;product=DUF2220 family protein;protein_id=WP_027703798.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5043496 5046927 . - . ID=gene-IXO1104_RS23630;Name=IXO1104_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23630;old_locus_tag=IXO1104_23610 NZ_CP047492.1 Protein Homology CDS 5043496 5046927 . - 0 ID=cds-WP_075240680.1;Parent=gene-IXO1104_RS23630;Dbxref=Genbank:WP_075240680.1;Name=WP_075240680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446454.1;locus_tag=IXO1104_RS23630;product=ATP-binding protein;protein_id=WP_075240680.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5047075 5047773 . - . ID=gene-IXO1104_RS23635;Name=IXO1104_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23635;old_locus_tag=IXO1104_23615 NZ_CP047492.1 Protein Homology CDS 5047075 5047773 . - 0 ID=cds-WP_011409830.1;Parent=gene-IXO1104_RS23635;Dbxref=Genbank:WP_011409830.1;Name=WP_011409830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260861.1;locus_tag=IXO1104_RS23635;product=DUF4194 domain-containing protein;protein_id=WP_011409830.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5047757 5049229 . - . ID=gene-IXO1104_RS23640;Name=IXO1104_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23640;old_locus_tag=IXO1104_23620 NZ_CP047492.1 Protein Homology CDS 5047757 5049229 . - 0 ID=cds-WP_011260862.1;Parent=gene-IXO1104_RS23640;Dbxref=Genbank:WP_011260862.1;Name=WP_011260862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301721.1;locus_tag=IXO1104_RS23640;product=DUF3375 domain-containing protein;protein_id=WP_011260862.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5049226 5049813 . - . ID=gene-IXO1104_RS23645;Name=IXO1104_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23645;old_locus_tag=IXO1104_23625 NZ_CP047492.1 Protein Homology CDS 5049226 5049813 . - 0 ID=cds-WP_041182343.1;Parent=gene-IXO1104_RS23645;Dbxref=Genbank:WP_041182343.1;Name=WP_041182343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409832.1;locus_tag=IXO1104_RS23645;product=DUF4276 family protein;protein_id=WP_041182343.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5049813 5051009 . - . ID=gene-IXO1104_RS23650;Name=IXO1104_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23650;old_locus_tag=IXO1104_23630 NZ_CP047492.1 Protein Homology CDS 5049813 5051009 . - 0 ID=cds-WP_011260863.1;Parent=gene-IXO1104_RS23650;Dbxref=Genbank:WP_011260863.1;Name=WP_011260863.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381256.1;locus_tag=IXO1104_RS23650;product=AAA family ATPase;protein_id=WP_011260863.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5051083 5051685 . - . ID=gene-IXO1104_RS23655;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=IXO1104_RS23655;old_locus_tag=IXO1104_23635 NZ_CP047492.1 Protein Homology CDS 5051083 5051685 . - 0 ID=cds-WP_041182832.1;Parent=gene-IXO1104_RS23655;Dbxref=Genbank:WP_041182832.1;Name=WP_041182832.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158364.1;locus_tag=IXO1104_RS23655;product=GTP cyclohydrolase I FolE;protein_id=WP_041182832.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5051858 5052304 . + . ID=gene-IXO1104_RS23660;Name=IXO1104_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23660;old_locus_tag=IXO1104_23640 NZ_CP047492.1 Protein Homology CDS 5051858 5052304 . + 0 ID=cds-WP_228383599.1;Parent=gene-IXO1104_RS23660;Dbxref=Genbank:WP_228383599.1;Name=WP_228383599.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452469.1;locus_tag=IXO1104_RS23660;product=MarR family transcriptional regulator;protein_id=WP_228383599.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5052346 5052563 . + . ID=gene-IXO1104_RS23665;Name=IXO1104_RS23665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23665;old_locus_tag=IXO1104_23645;pseudo=true NZ_CP047492.1 Protein Homology CDS 5052346 5052563 . + 0 ID=cds-IXO1104_RS23665;Parent=gene-IXO1104_RS23665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158363.1;locus_tag=IXO1104_RS23665;product=DUF1656 domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5052560 5052712 . + . ID=gene-IXO1104_RS23670;Name=IXO1104_RS23670;end_range=5052712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23670;old_locus_tag=IXO1104_23650;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 5052560 5052712 . + 0 ID=cds-IXO1104_RS23670;Parent=gene-IXO1104_RS23670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5052712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091523.1;locus_tag=IXO1104_RS23670;partial=true;product=transporter;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5052905 5053654 . + . ID=gene-IXO1104_RS23675;Name=IXO1104_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23675;old_locus_tag=IXO1104_23655 NZ_CP047492.1 Protein Homology CDS 5052905 5053654 . + 0 ID=cds-WP_075240518.1;Parent=gene-IXO1104_RS23675;Dbxref=Genbank:WP_075240518.1;Name=WP_075240518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=IXO1104_RS23675;product=TolC family protein;protein_id=WP_075240518.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5053651 5054217 . + . ID=gene-IXO1104_RS23680;Name=IXO1104_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23680;old_locus_tag=IXO1104_23660 NZ_CP047492.1 Protein Homology CDS 5053651 5054217 . + 0 ID=cds-WP_011409837.1;Parent=gene-IXO1104_RS23680;Dbxref=Genbank:WP_011409837.1;Name=WP_011409837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301717.1;locus_tag=IXO1104_RS23680;product=FUSC family protein;protein_id=WP_011409837.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5054493 5055854 . - . ID=gene-IXO1104_RS23685;Name=IXO1104_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23685;old_locus_tag=IXO1104_23665 NZ_CP047492.1 Protein Homology CDS 5054493 5055854 . - 0 ID=cds-WP_027703794.1;Parent=gene-IXO1104_RS23685;Dbxref=Genbank:WP_027703794.1;Name=WP_027703794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301716.1;locus_tag=IXO1104_RS23685;product=MFS transporter;protein_id=WP_027703794.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5055968 5056491 . - . ID=gene-IXO1104_RS23690;Name=IXO1104_RS23690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23690;old_locus_tag=IXO1104_23670;pseudo=true NZ_CP047492.1 Protein Homology CDS 5055968 5056491 . - 0 ID=cds-IXO1104_RS23690;Parent=gene-IXO1104_RS23690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158362.1;locus_tag=IXO1104_RS23690;product=YdeI/OmpD-associated family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5056521 5057291 . + . ID=gene-IXO1104_RS23695;Name=IXO1104_RS23695;end_range=5057291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23695;partial=true;pseudo=true;start_range=.,5056521 NZ_CP047492.1 Protein Homology CDS 5056521 5057291 . + 0 ID=cds-IXO1104_RS23695;Parent=gene-IXO1104_RS23695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5057291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238145.1;locus_tag=IXO1104_RS23695;partial=true;product=phospholipase D-like domain-containing protein;pseudo=true;start_range=.,5056521;transl_table=11 NZ_CP047492.1 RefSeq gene 5057325 5057831 . - . ID=gene-IXO1104_RS23700;Name=IXO1104_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23700 NZ_CP047492.1 Protein Homology CDS 5057325 5057831 . - 0 ID=cds-WP_012446462.1;Parent=gene-IXO1104_RS23700;Dbxref=Genbank:WP_012446462.1;Name=WP_012446462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409841.1;locus_tag=IXO1104_RS23700;product=hypothetical protein;protein_id=WP_012446462.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5058105 5058311 . + . ID=gene-IXO1104_RS23705;Name=IXO1104_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23705;old_locus_tag=IXO1104_23680 NZ_CP047492.1 Protein Homology CDS 5058105 5058311 . + 0 ID=cds-WP_011409842.1;Parent=gene-IXO1104_RS23705;Dbxref=Genbank:WP_011409842.1;Name=WP_011409842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364297.1;locus_tag=IXO1104_RS23705;product=hypothetical protein;protein_id=WP_011409842.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5058298 5059410 . + . ID=gene-IXO1104_RS23710;Name=IXO1104_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23710;old_locus_tag=IXO1104_23685 NZ_CP047492.1 Protein Homology CDS 5058298 5059410 . + 0 ID=cds-WP_075240517.1;Parent=gene-IXO1104_RS23710;Dbxref=Genbank:WP_075240517.1;Name=WP_075240517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158361.1;locus_tag=IXO1104_RS23710;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_075240517.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5059638 5059835 . - . ID=gene-IXO1104_RS23715;Name=IXO1104_RS23715;end_range=5059835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23715;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 5059638 5059835 . - 0 ID=cds-IXO1104_RS23715;Parent=gene-IXO1104_RS23715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5059835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557986.1;locus_tag=IXO1104_RS23715;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5059857 5061159 . - . ID=gene-IXO1104_RS23720;Name=IXO1104_RS23720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23720;old_locus_tag=IXO1104_23690;pseudo=true NZ_CP047492.1 Protein Homology CDS 5059857 5061159 . - 0 ID=cds-IXO1104_RS23720;Parent=gene-IXO1104_RS23720;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502411.1;locus_tag=IXO1104_RS23720;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5061160 5062116 . - . ID=gene-IXO1104_RS23725;Name=IXO1104_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23725;old_locus_tag=IXO1104_23695 NZ_CP047492.1 Protein Homology CDS 5061160 5062116 . - 0 ID=cds-WP_041182834.1;Parent=gene-IXO1104_RS23725;Dbxref=Genbank:WP_041182834.1;Name=WP_041182834.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS23725;product=IS30 family transposase;protein_id=WP_041182834.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5062150 5062506 . - . ID=gene-IXO1104_RS23730;Name=IXO1104_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23730;old_locus_tag=IXO1104_23700 NZ_CP047492.1 GeneMarkS-2+ CDS 5062150 5062506 . - 0 ID=cds-WP_229002661.1;Parent=gene-IXO1104_RS23730;Dbxref=Genbank:WP_229002661.1;Name=WP_229002661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23730;product=hypothetical protein;protein_id=WP_229002661.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5062663 5063409 . - . ID=gene-IXO1104_RS23735;Name=IXO1104_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23735;old_locus_tag=IXO1104_23705 NZ_CP047492.1 Protein Homology CDS 5062663 5063409 . - 0 ID=cds-WP_075239573.1;Parent=gene-IXO1104_RS23735;Dbxref=Genbank:WP_075239573.1;Name=WP_075239573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026917.2;locus_tag=IXO1104_RS23735;product=Imm52 family immunity protein;protein_id=WP_075239573.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5063406 5063705 . - . ID=gene-IXO1104_RS23740;Name=IXO1104_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23740;old_locus_tag=IXO1104_23710 NZ_CP047492.1 Protein Homology CDS 5063406 5063705 . - 0 ID=cds-WP_256724411.1;Parent=gene-IXO1104_RS23740;Dbxref=Genbank:WP_256724411.1;Name=WP_256724411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026984.2;locus_tag=IXO1104_RS23740;product=Tox-REase-5 domain-containing protein;protein_id=WP_256724411.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5063733 5064689 . - . ID=gene-IXO1104_RS23745;Name=IXO1104_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23745;old_locus_tag=IXO1104_23715 NZ_CP047492.1 Protein Homology CDS 5063733 5064689 . - 0 ID=cds-WP_041182719.1-7;Parent=gene-IXO1104_RS23745;Dbxref=Genbank:WP_041182719.1;Name=WP_041182719.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1104_RS23745;product=IS30-like element IS1112b family transposase;protein_id=WP_041182719.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5064737 5065171 . - . ID=gene-IXO1104_RS23750;Name=IXO1104_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23750;old_locus_tag=IXO1104_23720 NZ_CP047492.1 GeneMarkS-2+ CDS 5064737 5065171 . - 0 ID=cds-WP_256724875.1;Parent=gene-IXO1104_RS23750;Dbxref=Genbank:WP_256724875.1;Name=WP_256724875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23750;product=hypothetical protein;protein_id=WP_256724875.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5065185 5065526 . - . ID=gene-IXO1104_RS23755;Name=IXO1104_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23755;old_locus_tag=IXO1104_23725 NZ_CP047492.1 Protein Homology CDS 5065185 5065526 . - 0 ID=cds-WP_012446470.1;Parent=gene-IXO1104_RS23755;Dbxref=Genbank:WP_012446470.1;Name=WP_012446470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1104_RS23755;product=hypothetical protein;protein_id=WP_012446470.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5065507 5066064 . - . ID=gene-IXO1104_RS23760;Name=IXO1104_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23760;old_locus_tag=IXO1104_23730 NZ_CP047492.1 Protein Homology CDS 5065507 5066064 . - 0 ID=cds-WP_050580212.1;Parent=gene-IXO1104_RS23760;Dbxref=Genbank:WP_050580212.1;Name=WP_050580212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258481.1;locus_tag=IXO1104_RS23760;product=DUF4123 domain-containing protein;protein_id=WP_050580212.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5066013 5066423 . - . ID=gene-IXO1104_RS23765;Name=IXO1104_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23765;old_locus_tag=IXO1104_23735 NZ_CP047492.1 Protein Homology CDS 5066013 5066423 . - 0 ID=cds-WP_027704109.1;Parent=gene-IXO1104_RS23765;Dbxref=Genbank:WP_027704109.1;Name=WP_027704109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=IXO1104_RS23765;product=PAAR domain-containing protein;protein_id=WP_027704109.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5066755 5068130 . - . ID=gene-IXO1104_RS23770;Name=IXO1104_RS23770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23770;old_locus_tag=IXO1104_23740;pseudo=true NZ_CP047492.1 Protein Homology CDS 5066755 5068130 . - 0 ID=cds-IXO1104_RS23770;Parent=gene-IXO1104_RS23770;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1104_RS23770;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5068353 5069021 . - . ID=gene-IXO1104_RS23775;Name=IXO1104_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23775;old_locus_tag=IXO1104_23745 NZ_CP047492.1 Protein Homology CDS 5068353 5069021 . - 0 ID=cds-WP_075240415.1;Parent=gene-IXO1104_RS23775;Dbxref=Genbank:WP_075240415.1;Name=WP_075240415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016488.2;locus_tag=IXO1104_RS23775;product=RelA/SpoT domain-containing protein;protein_id=WP_075240415.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5069034 5070143 . - . ID=gene-IXO1104_RS23780;Name=IXO1104_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23780;old_locus_tag=IXO1104_23750 NZ_CP047492.1 Protein Homology CDS 5069034 5070143 . - 0 ID=cds-WP_027704148.1;Parent=gene-IXO1104_RS23780;Dbxref=Genbank:WP_027704148.1;Name=WP_027704148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025001.2;locus_tag=IXO1104_RS23780;product=ParA family protein;protein_id=WP_027704148.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5070246 5070695 . - . ID=gene-IXO1104_RS23785;Name=IXO1104_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23785;old_locus_tag=IXO1104_23755 NZ_CP047492.1 Protein Homology CDS 5070246 5070695 . - 0 ID=cds-WP_024742950.1;Parent=gene-IXO1104_RS23785;Dbxref=Genbank:WP_024742950.1;Name=WP_024742950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574041.1;locus_tag=IXO1104_RS23785;product=hypothetical protein;protein_id=WP_024742950.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5070820 5071041 . - . ID=gene-IXO1104_RS23790;Name=IXO1104_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23790;old_locus_tag=IXO1104_23760 NZ_CP047492.1 Protein Homology CDS 5070820 5071041 . - 0 ID=cds-WP_005921785.1;Parent=gene-IXO1104_RS23790;Dbxref=Genbank:WP_005921785.1;Name=WP_005921785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921785.1;locus_tag=IXO1104_RS23790;product=hypothetical protein;protein_id=WP_005921785.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5071721 5071844 . - . ID=gene-IXO1104_RS23795;Name=IXO1104_RS23795;end_range=5071844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23795;old_locus_tag=IXO1104_23765;partial=true;pseudo=true NZ_CP047492.1 Protein Homology CDS 5071721 5071844 . - 0 ID=cds-IXO1104_RS23795;Parent=gene-IXO1104_RS23795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5071844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050089.1;locus_tag=IXO1104_RS23795;partial=true;product=CsbD family protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5071938 5072123 . - . ID=gene-IXO1104_RS23800;Name=IXO1104_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23800;old_locus_tag=IXO1104_23770 NZ_CP047492.1 GeneMarkS-2+ CDS 5071938 5072123 . - 0 ID=cds-WP_012446478.1;Parent=gene-IXO1104_RS23800;Dbxref=Genbank:WP_012446478.1;Name=WP_012446478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1104_RS23800;product=hypothetical protein;protein_id=WP_012446478.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5072265 5072913 . - . ID=gene-IXO1104_RS23805;Name=IXO1104_RS23805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23805;old_locus_tag=IXO1104_23775;pseudo=true NZ_CP047492.1 Protein Homology CDS 5072265 5072913 . - 0 ID=cds-IXO1104_RS23805;Parent=gene-IXO1104_RS23805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364873.1;locus_tag=IXO1104_RS23805;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5073156 5074325 . - . ID=gene-IXO1104_RS23810;Name=IXO1104_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23810;old_locus_tag=IXO1104_23780 NZ_CP047492.1 Protein Homology CDS 5073156 5074325 . - 0 ID=cds-WP_011260879.1;Parent=gene-IXO1104_RS23810;Dbxref=Genbank:WP_011260879.1;Name=WP_011260879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118145.1;locus_tag=IXO1104_RS23810;product=glycerate kinase;protein_id=WP_011260879.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5074351 5075661 . - . ID=gene-IXO1104_RS23815;Name=IXO1104_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23815;old_locus_tag=IXO1104_23785 NZ_CP047492.1 Protein Homology CDS 5074351 5075661 . - 0 ID=cds-WP_041182532.1;Parent=gene-IXO1104_RS23815;Dbxref=Genbank:WP_041182532.1;Name=WP_041182532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160000.1;locus_tag=IXO1104_RS23815;product=MFS transporter;protein_id=WP_041182532.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5076038 5077307 . - . ID=gene-IXO1104_RS23820;Name=IXO1104_RS23820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23820;old_locus_tag=IXO1104_23790;pseudo=true NZ_CP047492.1 Protein Homology CDS 5076038 5077307 . - 0 ID=cds-IXO1104_RS23820;Parent=gene-IXO1104_RS23820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968240.1;locus_tag=IXO1104_RS23820;product=dipeptidase;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5077581 5077901 . - . ID=gene-IXO1104_RS23825;Name=IXO1104_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23825;old_locus_tag=IXO1104_23795 NZ_CP047492.1 Protein Homology CDS 5077581 5077901 . - 0 ID=cds-WP_010364861.1;Parent=gene-IXO1104_RS23825;Dbxref=Genbank:WP_010364861.1;Name=WP_010364861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155990.1;locus_tag=IXO1104_RS23825;product=hypothetical protein;protein_id=WP_010364861.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5078020 5079186 . - . ID=gene-IXO1104_RS23830;Name=IXO1104_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23830;old_locus_tag=IXO1104_23800 NZ_CP047492.1 Protein Homology CDS 5078020 5079186 . - 0 ID=cds-WP_027704146.1;Parent=gene-IXO1104_RS23830;Dbxref=Genbank:WP_027704146.1;Name=WP_027704146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155989.1;locus_tag=IXO1104_RS23830;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_027704146.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5079450 5080406 . + . ID=gene-IXO1104_RS23835;Name=IXO1104_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23835;old_locus_tag=IXO1104_23805 NZ_CP047492.1 Protein Homology CDS 5079450 5080406 . + 0 ID=cds-WP_012446483.1;Parent=gene-IXO1104_RS23835;Dbxref=Genbank:WP_012446483.1;Name=WP_012446483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912402.1;locus_tag=IXO1104_RS23835;product=TerC family protein;protein_id=WP_012446483.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5080781 5081566 . + . ID=gene-IXO1104_RS23840;Name=IXO1104_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23840;old_locus_tag=IXO1104_23810 NZ_CP047492.1 Protein Homology CDS 5080781 5081566 . + 0 ID=cds-WP_011260886.1;Parent=gene-IXO1104_RS23840;Dbxref=Genbank:WP_011260886.1;Name=WP_011260886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505371.1;locus_tag=IXO1104_RS23840;product=rhomboid family intramembrane serine protease;protein_id=WP_011260886.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5081696 5082796 . - . ID=gene-IXO1104_RS23845;Name=IXO1104_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23845;old_locus_tag=IXO1104_23815 NZ_CP047492.1 Protein Homology CDS 5081696 5082796 . - 0 ID=cds-WP_012446485.1;Parent=gene-IXO1104_RS23845;Dbxref=Genbank:WP_012446485.1;Name=WP_012446485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155987.1;locus_tag=IXO1104_RS23845;product=glycerophosphodiester phosphodiesterase;protein_id=WP_012446485.1;transl_table=11 NZ_CP047492.1 RefSeq pseudogene 5083030 5085281 . - . ID=gene-IXO1104_RS23850;Name=IXO1104_RS23850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1104_RS23850;old_locus_tag=IXO1104_23820;pseudo=true NZ_CP047492.1 Protein Homology CDS 5083030 5085281 . - 0 ID=cds-IXO1104_RS23850;Parent=gene-IXO1104_RS23850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482233.1;locus_tag=IXO1104_RS23850;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP047492.1 RefSeq gene 5085522 5086379 . + . ID=gene-IXO1104_RS23855;Name=IXO1104_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23855;old_locus_tag=IXO1104_23825 NZ_CP047492.1 Protein Homology CDS 5085522 5086379 . + 0 ID=cds-WP_011409859.1;Parent=gene-IXO1104_RS23855;Dbxref=Genbank:WP_011409859.1;Name=WP_011409859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971341.1;locus_tag=IXO1104_RS23855;product=phosphatase PAP2 family protein;protein_id=WP_011409859.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5086538 5087878 . - . ID=gene-IXO1104_RS23860;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=IXO1104_RS23860;old_locus_tag=IXO1104_23830 NZ_CP047492.1 Protein Homology CDS 5086538 5087878 . - 0 ID=cds-WP_075240149.1;Parent=gene-IXO1104_RS23860;Dbxref=Genbank:WP_075240149.1;Name=WP_075240149.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349216.1;locus_tag=IXO1104_RS23860;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_075240149.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5088043 5090745 . - . ID=gene-IXO1104_RS23865;Name=IXO1104_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1104_RS23865;old_locus_tag=IXO1104_23835 NZ_CP047492.1 Protein Homology CDS 5088043 5090745 . - 0 ID=cds-WP_075240150.1;Parent=gene-IXO1104_RS23865;Dbxref=Genbank:WP_075240150.1;Name=WP_075240150.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927165.1;locus_tag=IXO1104_RS23865;product=polysaccharide deacetylase family protein;protein_id=WP_075240150.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5090824 5092548 . - . ID=gene-IXO1104_RS23870;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=IXO1104_RS23870;old_locus_tag=IXO1104_23840 NZ_CP047492.1 Protein Homology CDS 5090824 5092548 . - 0 ID=cds-WP_012446489.1;Parent=gene-IXO1104_RS23870;Dbxref=Genbank:WP_012446489.1;Name=WP_012446489.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482225.1;locus_tag=IXO1104_RS23870;product=membrane protein insertase YidC;protein_id=WP_012446489.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5092574 5093011 . - . ID=gene-IXO1104_RS23875;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=IXO1104_RS23875;old_locus_tag=IXO1104_23845 NZ_CP047492.1 Protein Homology CDS 5092574 5093011 . - 0 ID=cds-WP_027704143.1;Parent=gene-IXO1104_RS23875;Dbxref=Genbank:WP_027704143.1;Name=WP_027704143.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052928.1;locus_tag=IXO1104_RS23875;product=ribonuclease P protein component;protein_id=WP_027704143.1;transl_table=11 NZ_CP047492.1 RefSeq gene 5093050 5093190 . - . ID=gene-IXO1104_RS23880;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=IXO1104_RS23880;old_locus_tag=IXO1104_23850 NZ_CP047492.1 Protein Homology CDS 5093050 5093190 . - 0 ID=cds-WP_002805908.1;Parent=gene-IXO1104_RS23880;Dbxref=Genbank:WP_002805908.1;Name=WP_002805908.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404565.1;locus_tag=IXO1104_RS23880;product=50S ribosomal protein L34;protein_id=WP_002805908.1;transl_table=11 ###