locus-tag	class	description
ATY43_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ATY43_RS00020	COG0187	DNA topoisomerase II activity
ATY43_RS00030	COG0501	Belongs to the peptidase M48B family
ATY43_RS00060	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ATY43_RS00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY43_RS00080	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ATY43_RS00090	COG4772	TonB-dependent receptor
ATY43_RS00105	COG3039	Transposase
ATY43_RS00110	COG1304	FMN binding
ATY43_RS00115	COG1755	Isoprenylcysteine carboxyl methyltransferase
ATY43_RS00130	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ATY43_RS00135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY43_RS00165	COG3039	Transposase
ATY43_RS00235	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS00270	COG1090	epimerase
ATY43_RS00275	COG0642	Histidine kinase
ATY43_RS00285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATY43_RS00390	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ATY43_RS00480	COG1511	domain protein
ATY43_RS00480	COG3264	Mechanosensitive ion channel
ATY43_RS00490	COG3293	Transposase
ATY43_RS00500	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY43_RS00505	COG2354	Protein conserved in bacteria
ATY43_RS00510	COG1649	PFAM Uncharacterised BCR, COG1649
ATY43_RS00530	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ATY43_RS00555	COG0702	epimerase
ATY43_RS00565	COG1858	cytochrome C peroxidase
ATY43_RS00630	COG0513	Belongs to the DEAD box helicase family
ATY43_RS00640	COG3039	Transposase
ATY43_RS00660	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY43_RS00680	COG1116	anion transmembrane transporter activity
ATY43_RS00715	COG1136	(ABC) transporter
ATY43_RS00730	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS00755	COG1272	protein, Hemolysin III
ATY43_RS00760	COG1111	helicase
ATY43_RS00760	COG1205	dead DEAH box helicase
ATY43_RS00815	COG0067	glutamate synthase
ATY43_RS00815	COG0069	glutamate synthase activity
ATY43_RS00815	COG0070	glutamate synthase
ATY43_RS00820	COG0493	'glutamate synthase
ATY43_RS00840	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS00865	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ATY43_RS00870	COG1609	Transcriptional regulator
ATY43_RS00895	COG0366	Alpha amylase catalytic
ATY43_RS00900	COG0366	Alpha amylase catalytic
ATY43_RS00920	COG3328	transposase activity
ATY43_RS00945	COG0606	chelatase, subunit chli
ATY43_RS00985	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ATY43_RS00990	COG1166	arginine decarboxylase activity
ATY43_RS01035	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY43_RS01060	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS01075	COG2801	Transposase and inactivated derivatives
ATY43_RS01085	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ATY43_RS01100	COG0210	DNA helicase
ATY43_RS01115	COG3132	Protein of unknown function, DUF480
ATY43_RS01120	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
ATY43_RS01125	COG0284	orotidine-5'-phosphate decarboxylase activity
ATY43_RS01155	COG2937	Belongs to the GPAT DAPAT family
ATY43_RS01160	COG3321	synthase
ATY43_RS01160	COG0604	alcohol dehydrogenase
ATY43_RS01160	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS01175	COG2963	transposase activity
ATY43_RS01180	COG3328	transposase activity
ATY43_RS01220	COG3328	transposase activity
ATY43_RS01230	COG1752	Esterase of the alpha-beta hydrolase superfamily
ATY43_RS01240	COG1119	ATPase activity
ATY43_RS01255	COG0517	IMP dehydrogenase activity
ATY43_RS01255	COG1125	glycine betaine transport
ATY43_RS01270	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY43_RS01275	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ATY43_RS01280	COG3550	peptidyl-serine autophosphorylation
ATY43_RS01285	COG1396	sequence-specific DNA binding
ATY43_RS01305	COG0489	protein tyrosine kinase activity
ATY43_RS01310	COG2062	phosphohistidine phosphatase, SixA
ATY43_RS01320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY43_RS01365	COG1968	undecaprenyl-diphosphatase activity
ATY43_RS01370	COG0174	glutamine synthetase
ATY43_RS01375	COG0347	Belongs to the P(II) protein family
ATY43_RS01380	COG0004	ammonium transporteR
ATY43_RS01385	COG3852	Histidine kinase
ATY43_RS01390	COG2204	response regulator
ATY43_RS01395	COG2032	superoxide dismutase activity
ATY43_RS01400	COG2032	superoxide dismutase activity
ATY43_RS01435	COG1196	nuclear chromosome segregation
ATY43_RS01460	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ATY43_RS01465	COG1074	ATP-dependent DNA helicase activity
ATY43_RS01475	COG3549	Plasmid maintenance system killer
ATY43_RS01550	COG1764	response to oxidative stress
ATY43_RS01555	COG1846	Transcriptional regulator
ATY43_RS01605	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ATY43_RS01615	COG3293	Transposase
ATY43_RS01650	COG2211	Major facilitator Superfamily
ATY43_RS01670	COG3693	PFAM glycoside hydrolase, family 10
ATY43_RS01675	COG3693	PFAM glycoside hydrolase, family 10
ATY43_RS01700	COG0246	Mannitol dehydrogenase
ATY43_RS01705	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY43_RS01715	COG4948	Mandelate Racemase Muconate Lactonizing
ATY43_RS01725	COG3661	Belongs to the glycosyl hydrolase 67 family
ATY43_RS01740	COG0037	tRNA processing
ATY43_RS01745	COG2974	May be involved in recombination
ATY43_RS01770	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATY43_RS01780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATY43_RS01790	COG0805	protein transport
ATY43_RS01800	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ATY43_RS01800	COG0519	Catalyzes the synthesis of GMP from XMP
ATY43_RS01815	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY43_RS01820	COG0752	glycyl-tRNA synthetase alpha subunit
ATY43_RS01830	COG0457	Tetratricopeptide repeat
ATY43_RS01835	COG4771	TonB-dependent receptor
ATY43_RS01850	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ATY43_RS01860	COG0697	spore germination
ATY43_RS01870	COG0523	cobalamin synthesis protein
ATY43_RS01930	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS01935	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ATY43_RS01940	COG4770	biotin carboxylase activity
ATY43_RS01950	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS01990	COG2351	hydroxyisourate hydrolase activity
ATY43_RS02010	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ATY43_RS02055	COG0084	hydrolase, TatD family'
ATY43_RS02070	COG0583	DNA-binding transcription factor activity
ATY43_RS02075	COG2814	Major facilitator Superfamily
ATY43_RS02085	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ATY43_RS02090	COG1902	pentaerythritol trinitrate reductase activity
ATY43_RS02120	COG0745	RESPONSE REGULATOR receiver
ATY43_RS02125	COG2205	protein histidine kinase activity
ATY43_RS02130	COG2205	protein histidine kinase activity
ATY43_RS02145	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY43_RS02150	COG0583	DNA-binding transcription factor activity
ATY43_RS02180	COG0702	epimerase
ATY43_RS02185	COG1733	regulation of RNA biosynthetic process
ATY43_RS02250	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY43_RS02265	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY43_RS02305	COG2911	Protein conserved in bacteria
ATY43_RS02310	COG0729	surface antigen
ATY43_RS02320	COG2963	transposase activity
ATY43_RS02330	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ATY43_RS02335	COG3118	belongs to the thioredoxin family
ATY43_RS02345	COG2884	Cell division ATP-binding protein ftsE
ATY43_RS02350	COG2177	Part of the ABC transporter FtsEX involved in
ATY43_RS02355	COG2201	protein-glutamate methylesterase activity
ATY43_RS02360	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ATY43_RS02365	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY43_RS02375	COG1252	NADH dehydrogenase
ATY43_RS02405	COG0459	protein refolding
ATY43_RS02415	COG4771	TonB-dependent receptor
ATY43_RS02430	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ATY43_RS02470	COG3386	PFAM SMP-30 Gluconolaconase
ATY43_RS02485	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY43_RS02520	COG2353	YceI-like domain
ATY43_RS02615	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ATY43_RS02655	COG0408	coproporphyrinogen oxidase activity
ATY43_RS02670	COG3039	Transposase
ATY43_RS02690	COG0129	dihydroxy-acid dehydratase activity
ATY43_RS02700	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ATY43_RS02735	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATY43_RS02740	COG0318	PFAM AMP-dependent synthetase and ligase
ATY43_RS02745	COG0727	PFAM Uncharacterised protein family (UPF0153)
ATY43_RS02750	COG0596	Alpha beta hydrolase
ATY43_RS02765	COG3177	Filamentation induced by cAMP protein fic
ATY43_RS02770	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY43_RS02785	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ATY43_RS02810	COG4191	Histidine kinase
ATY43_RS02815	COG0028	Belongs to the TPP enzyme family
ATY43_RS02830	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ATY43_RS02835	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATY43_RS02860	COG5383	Protein conserved in bacteria
ATY43_RS02870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY43_RS02875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY43_RS02880	COG1473	amidohydrolase
ATY43_RS02890	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY43_RS02890	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY43_RS02900	COG3328	transposase activity
ATY43_RS03000	COG0358	DNA primase activity
ATY43_RS03005	COG1295	ribonuclease BN
ATY43_RS03015	COG3293	Transposase
ATY43_RS03025	COG3039	Transposase
ATY43_RS03060	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATY43_RS03065	COG0735	belongs to the Fur family
ATY43_RS03110	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ATY43_RS03115	COG0084	hydrolase, TatD family'
ATY43_RS03130	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS03155	COG0367	asparagine synthase
ATY43_RS03165	COG0305	Participates in initiation and elongation during chromosome replication
ATY43_RS03170	COG0415	Belongs to the DNA photolyase family
ATY43_RS03295	COG5002	protein histidine kinase activity
ATY43_RS03295	COG5001	Diguanylate cyclase
ATY43_RS03300	COG1187	pseudouridine synthase activity
ATY43_RS03320	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY43_RS03330	COG0475	glutathione-regulated potassium exporter activity
ATY43_RS03335	COG5000	phosphorelay sensor kinase activity
ATY43_RS03335	COG5002	protein histidine kinase activity
ATY43_RS03340	COG0745	RESPONSE REGULATOR receiver
ATY43_RS03370	COG1132	(ABC) transporter
ATY43_RS03380	COG3293	Transposase
ATY43_RS03390	COG3039	Transposase
ATY43_RS03405	COG3039	Transposase
ATY43_RS03425	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ATY43_RS03435	COG4969	Belongs to the N-Me-Phe pilin family
ATY43_RS03440	COG2194	sulfuric ester hydrolase activity
ATY43_RS03460	COG2184	nucleotidyltransferase activity
ATY43_RS03480	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY43_RS03485	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ATY43_RS03495	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ATY43_RS03495	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY43_RS03500	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY43_RS03505	COG0564	pseudouridine synthase activity
ATY43_RS03530	COG3387	PFAM Glycoside hydrolase 15-related
ATY43_RS03535	COG1877	trehalose-phosphatase activity
ATY43_RS03575	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ATY43_RS03590	COG1595	DNA-templated transcription, initiation
ATY43_RS03600	COG1946	Acyl-CoA thioesterase
ATY43_RS03615	COG0824	Thioesterase
ATY43_RS03620	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ATY43_RS03630	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ATY43_RS03635	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ATY43_RS03640	COG0268	Binds directly to 16S ribosomal RNA
ATY43_RS03645	COG0728	peptidoglycan biosynthetic process
ATY43_RS03650	COG0196	riboflavin kinase activity
ATY43_RS03660	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ATY43_RS03665	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ATY43_RS03680	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ATY43_RS03685	COG1845	cytochrome c oxidase, subunit III
ATY43_RS03690	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ATY43_RS03710	COG3209	COG3209 Rhs family protein
ATY43_RS03770	COG3039	Transposase
ATY43_RS03775	COG3039	Transposase
ATY43_RS03795	COG2963	transposase activity
ATY43_RS03800	COG2801	Transposase and inactivated derivatives
ATY43_RS03835	COG2801	Transposase and inactivated derivatives
ATY43_RS03845	COG2963	transposase activity
ATY43_RS03930	COG0632	four-way junction helicase activity
ATY43_RS03940	COG2255	four-way junction helicase activity
ATY43_RS03945	COG0824	Thioesterase
ATY43_RS03955	COG0848	biopolymer transport protein
ATY43_RS03970	COG2885	chlorophyll binding
ATY43_RS03980	COG0602	queuosine metabolic process
ATY43_RS03995	COG3293	Transposase
ATY43_RS04010	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ATY43_RS04030	COG0514	ATP-dependent DNA helicase (RecQ)
ATY43_RS04035	COG0783	Belongs to the Dps family
ATY43_RS04040	COG1643	Atp-dependent helicase
ATY43_RS04060	COG0837	glucose binding
ATY43_RS04075	COG0535	radical SAM domain protein
ATY43_RS04080	COG0535	radical SAM domain protein
ATY43_RS04095	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY43_RS04105	COG1215	transferase activity, transferring glycosyl groups
ATY43_RS04110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATY43_RS04120	COG1199	ATP-dependent helicase activity
ATY43_RS04130	COG1397	ADP-ribosylglycohydrolase
ATY43_RS04140	COG0189	ligase activity
ATY43_RS04155	COG0835	chemotaxis
ATY43_RS04160	COG0840	transmembrane signaling receptor activity
ATY43_RS04165	COG0784	Response regulator, receiver
ATY43_RS04165	COG0643	Histidine kinase
ATY43_RS04165	COG2198	Histidine kinase
ATY43_RS04200	COG2304	oxidoreductase activity
ATY43_RS04210	COG1446	asparaginase
ATY43_RS04260	COG3537	Alpha-1,2-mannosidase
ATY43_RS04315	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY43_RS04325	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ATY43_RS04335	COG3858	chitin binding
ATY43_RS04335	COG1388	LysM domain
ATY43_RS04350	COG0837	glucose binding
ATY43_RS04355	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ATY43_RS04365	COG0494	nUDIX hydrolase
ATY43_RS04375	COG3956	TIGRFAM MazG family protein
ATY43_RS04390	COG0330	HflC and HflK could
ATY43_RS04405	COG0509	glycine decarboxylation via glycine cleavage system
ATY43_RS04430	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS04440	COG1309	transcriptional regulator
ATY43_RS04445	COG4771	TonB-dependent receptor
ATY43_RS04455	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ATY43_RS04465	COG0463	Glycosyl transferase, family 2
ATY43_RS04470	COG0517	IMP dehydrogenase activity
ATY43_RS04470	COG0516	GMP reductase activity
ATY43_RS04490	COG1272	protein, Hemolysin III
ATY43_RS04500	COG0739	heme binding
ATY43_RS04505	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY43_RS04510	COG0626	cystathionine gamma-synthase activity
ATY43_RS04520	COG1760	l-serine dehydratase
ATY43_RS04530	COG2353	YceI-like domain
ATY43_RS04540	COG2353	YceI-like domain
ATY43_RS04610	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS04615	COG1024	Enoyl-CoA hydratase
ATY43_RS04635	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY43_RS04635	COG1024	Enoyl-CoA hydratase
ATY43_RS04680	COG1381	Involved in DNA repair and RecF pathway recombination
ATY43_RS04695	COG2954	triphosphatase activity
ATY43_RS04720	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ATY43_RS04725	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
ATY43_RS04730	COG3046	protein related to deoxyribodipyrimidine photolyase
ATY43_RS04740	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ATY43_RS04745	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ATY43_RS04750	COG1278	Cold shock
ATY43_RS04775	COG1201	RNA secondary structure unwinding
ATY43_RS04780	COG1793	dna ligase
ATY43_RS04790	COG1793	dna ligase
ATY43_RS04790	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ATY43_RS04820	COG0183	Belongs to the thiolase family
ATY43_RS04840	COG1451	nucleotide metabolic process
ATY43_RS04855	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ATY43_RS04860	COG3039	Transposase
ATY43_RS04900	COG1047	Peptidyl-prolyl cis-trans
ATY43_RS04915	COG2824	Alkylphosphonate utilization operon protein PhnA
ATY43_RS04925	COG1902	pentaerythritol trinitrate reductase activity
ATY43_RS04930	COG2814	Major facilitator Superfamily
ATY43_RS04965	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ATY43_RS04965	COG0392	lysyltransferase activity
ATY43_RS04980	COG0251	oxidation-reduction process
ATY43_RS04985	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY43_RS05000	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY43_RS05025	COG1595	DNA-templated transcription, initiation
ATY43_RS05045	COG2878	Part of a membrane complex involved in electron transport
ATY43_RS05055	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY43_RS05055	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY43_RS05065	COG0346	lactoylglutathione lyase activity
ATY43_RS05075	COG0833	amino acid
ATY43_RS05080	COG2040	homocysteine
ATY43_RS05100	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY43_RS05130	COG0529	Catalyzes the synthesis of activated sulfate
ATY43_RS05130	COG2895	sulfate adenylyltransferase (ATP) activity
ATY43_RS05165	COG1981	membrane
ATY43_RS05200	COG1131	(ABC) transporter
ATY43_RS05205	COG4771	TonB-dependent receptor
ATY43_RS05215	COG0825	malonyl-CoA metabolic process
ATY43_RS05235	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY43_RS05240	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY43_RS05255	COG0750	zinc metalloprotease
ATY43_RS05265	COG0575	Belongs to the CDS family
ATY43_RS05275	COG0233	cytoplasmic translational termination
ATY43_RS05290	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATY43_RS05350	COG1393	Belongs to the ArsC family
ATY43_RS05360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY43_RS05365	COG0367	asparagine synthase
ATY43_RS05380	COG4774	siderophore transport
ATY43_RS05410	COG2207	Transcriptional regulator
ATY43_RS05425	COG1566	PFAM secretion protein HlyD family protein
ATY43_RS05430	COG2814	Major facilitator Superfamily
ATY43_RS05445	COG3293	Transposase
ATY43_RS05465	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS05485	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ATY43_RS05495	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS05515	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ATY43_RS05525	COG2914	Belongs to the UPF0125 (RnfH) family
ATY43_RS05530	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY43_RS05540	COG0497	DNA recombination
ATY43_RS05550	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ATY43_RS05560	COG0484	heat shock protein binding
ATY43_RS05565	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ATY43_RS05570	COG0287	Prephenate dehydrogenase
ATY43_RS05570	COG1605	Chorismate mutase
ATY43_RS05590	COG0583	DNA-binding transcription factor activity
ATY43_RS05600	COG1132	(ABC) transporter
ATY43_RS05635	COG2850	peptidyl-arginine hydroxylation
ATY43_RS05680	COG3293	Transposase
ATY43_RS05690	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS05700	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS05740	COG1131	(ABC) transporter
ATY43_RS05745	COG1725	Transcriptional regulator
ATY43_RS05750	COG0386	Belongs to the glutathione peroxidase family
ATY43_RS05765	COG2900	Belongs to the SlyX family
ATY43_RS05780	COG1609	Transcriptional regulator
ATY43_RS05790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY43_RS05800	COG0646	methionine synthase
ATY43_RS05800	COG1410	methionine synthase
ATY43_RS05805	COG1410	methionine synthase
ATY43_RS05805	COG0646	methionine synthase
ATY43_RS05810	COG2226	methyltransferase
ATY43_RS05815	COG1960	acyl-CoA dehydrogenase activity
ATY43_RS05855	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY43_RS05865	COG3039	Transposase
ATY43_RS05895	COG3328	transposase activity
ATY43_RS05915	COG1278	Cold shock
ATY43_RS05960	COG2801	Transposase and inactivated derivatives
ATY43_RS05965	COG2963	transposase activity
ATY43_RS05995	COG3039	Transposase
ATY43_RS06005	COG0583	DNA-binding transcription factor activity
ATY43_RS06075	COG0742	ribosomal rna small subunit methyltransferase
ATY43_RS06080	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ATY43_RS06095	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ATY43_RS06100	COG0405	Gamma-glutamyltransferase
ATY43_RS06115	COG3293	Transposase
ATY43_RS06230	COG3039	Transposase
ATY43_RS06275	COG0343	queuine tRNA-ribosyltransferase activity
ATY43_RS06280	COG1862	Preprotein translocase
ATY43_RS06285	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY43_RS06290	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY43_RS06320	COG3328	transposase activity
ATY43_RS06335	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY43_RS06345	COG0704	Plays a role in the regulation of phosphate uptake
ATY43_RS06360	COG0573	inorganic phosphate transmembrane transporter activity
ATY43_RS06365	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ATY43_RS06385	COG3293	Transposase
ATY43_RS06405	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ATY43_RS06415	COG1024	Enoyl-CoA hydratase
ATY43_RS06425	COG0494	nUDIX hydrolase
ATY43_RS06465	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY43_RS06465	COG0116	Belongs to the methyltransferase superfamily
ATY43_RS06490	COG0667	Aldo Keto reductase
ATY43_RS06500	COG2925	Exonuclease
ATY43_RS06525	COG0288	reversible hydration of carbon dioxide
ATY43_RS06560	COG0316	Belongs to the HesB IscA family
ATY43_RS06565	COG0360	Binds together with S18 to 16S ribosomal RNA
ATY43_RS06575	COG0359	binds to the 23S rRNA
ATY43_RS06585	COG3115	cell septum assembly
ATY43_RS06600	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ATY43_RS06615	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ATY43_RS06625	COG2963	transposase activity
ATY43_RS06645	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ATY43_RS06655	COG2986	histidine ammonia-lyase
ATY43_RS06660	COG1228	amidohydrolase
ATY43_RS06700	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ATY43_RS06710	COG0077	Prephenate dehydratase
ATY43_RS06710	COG1605	Chorismate mutase
ATY43_RS06715	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ATY43_RS06725	COG2963	transposase activity
ATY43_RS06740	COG4566	intracellular signal transduction
ATY43_RS06785	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY43_RS06790	COG1469	GTP cyclohydrolase I activity
ATY43_RS06810	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ATY43_RS06845	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY43_RS06860	COG4251	negative regulation of phosphorylation
ATY43_RS06860	COG5001	Diguanylate cyclase
ATY43_RS06860	COG2203	Gaf domain
ATY43_RS06860	COG3706	GGDEF domain
ATY43_RS06945	COG0386	Belongs to the glutathione peroxidase family
ATY43_RS07030	COG3293	Transposase
ATY43_RS07040	COG1247	-acetyltransferase
ATY43_RS07065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ATY43_RS07085	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY43_RS07090	COG1469	GTP cyclohydrolase I activity
ATY43_RS07200	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATY43_RS07215	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATY43_RS07225	COG0431	NADPH-dependent FMN reductase
ATY43_RS07230	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ATY43_RS07235	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATY43_RS07255	COG2205	protein histidine kinase activity
ATY43_RS07255	COG5002	protein histidine kinase activity
ATY43_RS07255	COG0784	Response regulator, receiver
ATY43_RS07280	COG3293	Transposase
ATY43_RS07295	COG0800	Aldolase
ATY43_RS07300	COG0129	dihydroxy-acid dehydratase activity
ATY43_RS07305	COG0363	glucosamine-6-phosphate deaminase activity
ATY43_RS07315	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY43_RS07330	COG0354	folic acid binding
ATY43_RS07340	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ATY43_RS07355	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ATY43_RS07370	COG4591	ABC-type transport system involved in lipoprotein release permease component
ATY43_RS07395	COG0811	peptide transport
ATY43_RS07410	COG1663	tetraacyldisaccharide 4'-kinase activity
ATY43_RS07420	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATY43_RS07430	COG0322	excinuclease ABC activity
ATY43_RS07465	COG3328	transposase activity
ATY43_RS07490	COG2801	Transposase and inactivated derivatives
ATY43_RS07500	COG2201	protein-glutamate methylesterase activity
ATY43_RS07520	COG3293	Transposase
ATY43_RS07565	COG3293	Transposase
ATY43_RS07635	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ATY43_RS07635	COG0140	phosphoribosyl-ATP diphosphatase activity
ATY43_RS07645	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ATY43_RS07655	COG0131	Imidazoleglycerol-phosphate dehydratase
ATY43_RS07655	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ATY43_RS07670	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ATY43_RS07695	COG0124	histidyl-tRNA synthetase
ATY43_RS07700	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY43_RS07710	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ATY43_RS07745	COG1012	belongs to the aldehyde dehydrogenase family
ATY43_RS07770	COG0697	spore germination
ATY43_RS07775	COG1794	racemase activity, acting on amino acids and derivatives
ATY43_RS07795	COG0671	phosphoesterase, PA-phosphatase related
ATY43_RS07810	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ATY43_RS07825	COG2183	response to ionizing radiation
ATY43_RS07835	COG0723	plastoquinol--plastocyanin reductase activity
ATY43_RS07835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY43_RS07850	COG3243	poly(R)-hydroxyalkanoic acid synthase
ATY43_RS07860	COG1183	phosphatidylcholine synthase activity
ATY43_RS07865	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS07890	COG0668	transmembrane transport
ATY43_RS07910	COG1914	H( )-stimulated, divalent metal cation uptake system
ATY43_RS07925	COG0583	DNA-binding transcription factor activity
ATY43_RS07930	COG0583	DNA-binding transcription factor activity
ATY43_RS07945	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS07960	COG0583	DNA-binding transcription factor activity
ATY43_RS07965	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY43_RS07985	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ATY43_RS08020	COG0475	glutathione-regulated potassium exporter activity
ATY43_RS08020	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY43_RS08025	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ATY43_RS08035	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATY43_RS08040	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ATY43_RS08050	COG0776	regulation of translation
ATY43_RS08055	COG0539	negative regulation of cytoplasmic translation
ATY43_RS08060	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ATY43_RS08075	COG2957	Belongs to the agmatine deiminase family
ATY43_RS08085	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY43_RS08110	COG0395	ABC-type sugar transport system, permease component
ATY43_RS08115	COG1175	transmembrane transport
ATY43_RS08145	COG2350	Protein conserved in bacteria
ATY43_RS08150	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ATY43_RS08155	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ATY43_RS08160	COG1187	pseudouridine synthase activity
ATY43_RS08185	COG0436	Aminotransferase
ATY43_RS08250	COG0277	FAD linked oxidase domain protein
ATY43_RS08255	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ATY43_RS08265	COG0531	amino acid
ATY43_RS08270	COG0531	amino acid
ATY43_RS08280	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ATY43_RS08310	COG3039	Transposase
ATY43_RS08320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ATY43_RS08355	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS08400	COG0303	'Molybdopterin
ATY43_RS08410	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY43_RS08420	COG1426	Protein conserved in bacteria
ATY43_RS08430	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ATY43_RS08445	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY43_RS08445	COG1024	Enoyl-CoA hydratase
ATY43_RS08450	COG0183	Belongs to the thiolase family
ATY43_RS08455	COG0038	chloride channel
ATY43_RS08475	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ATY43_RS08495	COG1674	ftsk spoiiie
ATY43_RS08500	COG0492	ferredoxin-NADP+ reductase activity
ATY43_RS08530	COG0542	response to heat
ATY43_RS08570	COG5001	Diguanylate cyclase
ATY43_RS08575	COG4585	Histidine kinase
ATY43_RS08585	COG5002	protein histidine kinase activity
ATY43_RS08605	COG0835	chemotaxis
ATY43_RS08605	COG0784	Response regulator, receiver
ATY43_RS08615	COG1558	bacterial-type flagellum-dependent cell motility
ATY43_RS08620	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ATY43_RS08630	COG4787	bacterial-type flagellum-dependent cell motility
ATY43_RS08665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ATY43_RS08670	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ATY43_RS08700	COG2201	protein-glutamate methylesterase activity
ATY43_RS08720	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY43_RS08730	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS08765	COG1677	Flagellar hook-basal body complex protein FliE
ATY43_RS08815	COG3190	flagellar
ATY43_RS08835	COG1684	flagellar biosynthetic protein fliR
ATY43_RS08890	COG0784	Response regulator, receiver
ATY43_RS08890	COG2198	Histidine kinase
ATY43_RS08890	COG0643	Histidine kinase
ATY43_RS08905	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS08925	COG3209	COG3209 Rhs family protein
ATY43_RS09030	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ATY43_RS09035	COG4988	ABC transporter
ATY43_RS09045	COG1271	oxidase subunit
ATY43_RS09050	COG1294	oxidase, subunit
ATY43_RS09075	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ATY43_RS09095	COG0165	Argininosuccinate lyase
ATY43_RS09110	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ATY43_RS09115	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY43_RS09125	COG0137	argininosuccinate synthase activity
ATY43_RS09130	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ATY43_RS09145	COG2166	iron-sulfur cluster assembly
ATY43_RS09175	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ATY43_RS09185	COG4302	ethanolamine ammonia-lyase activity
ATY43_RS09205	COG3039	Transposase
ATY43_RS09225	COG4677	pectinesterase activity
ATY43_RS09255	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY43_RS09260	COG0402	S-adenosylhomocysteine deaminase activity
ATY43_RS09275	COG1509	lysine 2,3-aminomutase activity
ATY43_RS09280	COG5001	Diguanylate cyclase
ATY43_RS09280	COG3300	MHYT domain
ATY43_RS09295	COG0483	inositol monophosphate 1-phosphatase activity
ATY43_RS09300	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY43_RS09325	COG0488	(ABC) transporter
ATY43_RS09330	COG0513	Belongs to the DEAD box helicase family
ATY43_RS09340	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ATY43_RS09350	COG0625	glutathione transferase activity
ATY43_RS09360	COG1671	Belongs to the UPF0178 family
ATY43_RS09365	COG4681	YaeQ
ATY43_RS09370	COG2081	HI0933 family
ATY43_RS09395	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS09415	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ATY43_RS09420	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY43_RS09425	COG0802	atpase or kinase
ATY43_RS09430	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ATY43_RS09430	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ATY43_RS09435	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY43_RS09455	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY43_RS09515	COG3039	Transposase
ATY43_RS09520	COG3328	transposase activity
ATY43_RS09550	COG2969	positive regulation of protein catabolic process
ATY43_RS09555	COG0625	glutathione transferase activity
ATY43_RS09560	COG2857	Cytochrome c1
ATY43_RS09565	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ATY43_RS09570	COG0723	plastoquinol--plastocyanin reductase activity
ATY43_RS09575	COG0741	lytic transglycosylase activity
ATY43_RS09605	COG1702	phosphate starvation-inducible protein PhoH
ATY43_RS09625	COG4535	Mg2 and Co2 transporter CorC
ATY43_RS09640	COG1012	belongs to the aldehyde dehydrogenase family
ATY43_RS09650	COG1177	transmembrane transport
ATY43_RS09655	COG1176	ABC-type spermidine putrescine transport system, permease component I
ATY43_RS09660	COG3842	ATPase activity
ATY43_RS09695	COG0174	glutamine synthetase
ATY43_RS09700	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY43_RS09720	COG0243	molybdopterin cofactor binding
ATY43_RS09730	COG2223	nitrite transmembrane transporter activity
ATY43_RS09740	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ATY43_RS09745	COG1121	(ABC) transporter
ATY43_RS09755	COG2733	membrane
ATY43_RS09760	COG0784	Response regulator, receiver
ATY43_RS09760	COG5002	protein histidine kinase activity
ATY43_RS09760	COG2205	protein histidine kinase activity
ATY43_RS09770	COG3039	Transposase
ATY43_RS09775	COG2902	Dehydrogenase
ATY43_RS09785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY43_RS09790	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY43_RS09810	COG1609	Transcriptional regulator
ATY43_RS09815	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY43_RS09815	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY43_RS09820	COG1105	Belongs to the carbohydrate kinase PfkB family
ATY43_RS09825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY43_RS09825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY43_RS09840	COG3039	Transposase
ATY43_RS09940	COG3039	Transposase
ATY43_RS09960	COG4771	TonB-dependent receptor
ATY43_RS09970	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY43_RS09990	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ATY43_RS09995	COG1360	Flagellar Motor Protein
ATY43_RS10005	COG0835	chemotaxis
ATY43_RS10015	COG0745	RESPONSE REGULATOR receiver
ATY43_RS10045	COG0840	transmembrane signaling receptor activity
ATY43_RS10055	COG3293	Transposase
ATY43_RS10065	COG0840	transmembrane signaling receptor activity
ATY43_RS10075	COG0840	transmembrane signaling receptor activity
ATY43_RS10080	COG0840	transmembrane signaling receptor activity
ATY43_RS10085	COG0840	transmembrane signaling receptor activity
ATY43_RS10090	COG0840	transmembrane signaling receptor activity
ATY43_RS10105	COG0835	chemotaxis
ATY43_RS10125	COG0840	transmembrane signaling receptor activity
ATY43_RS10155	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY43_RS10185	COG0318	PFAM AMP-dependent synthetase and ligase
ATY43_RS10190	COG1024	Enoyl-CoA hydratase
ATY43_RS10195	COG0784	Response regulator, receiver
ATY43_RS10195	COG2198	Histidine kinase
ATY43_RS10195	COG2205	protein histidine kinase activity
ATY43_RS10215	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATY43_RS10260	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ATY43_RS10270	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY43_RS10275	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ATY43_RS10285	COG0505	Belongs to the CarA family
ATY43_RS10290	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ATY43_RS10300	COG3293	Transposase
ATY43_RS10305	COG2258	MOSC domain
ATY43_RS10310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATY43_RS10360	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ATY43_RS10380	COG0477	Major facilitator Superfamily
ATY43_RS10390	COG1070	Carbohydrate kinase
ATY43_RS10405	COG1501	Belongs to the glycosyl hydrolase 31 family
ATY43_RS10420	COG0800	Aldolase
ATY43_RS10425	COG4948	Mandelate Racemase Muconate Lactonizing
ATY43_RS10435	COG3734	2-keto-3-deoxy-galactonokinase
ATY43_RS10440	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ATY43_RS10450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY43_RS10465	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ATY43_RS10470	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ATY43_RS10480	COG0351	phosphomethylpyrimidine kinase
ATY43_RS10510	COG0583	DNA-binding transcription factor activity
ATY43_RS10515	COG1741	Belongs to the pirin family
ATY43_RS10535	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ATY43_RS10540	COG0305	Participates in initiation and elongation during chromosome replication
ATY43_RS10560	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ATY43_RS10565	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ATY43_RS10570	COG2137	regulation of response to DNA damage stimulus
ATY43_RS10575	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ATY43_RS10590	COG1546	Belongs to the CinA family
ATY43_RS10595	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ATY43_RS10610	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ATY43_RS10620	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ATY43_RS10625	COG1534	Rna-binding protein
ATY43_RS10640	COG1238	metal cluster binding
ATY43_RS10645	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY43_RS10650	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ATY43_RS10655	COG2840	Smr protein MutS2
ATY43_RS10665	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ATY43_RS10675	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ATY43_RS10680	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ATY43_RS10685	COG0148	phosphopyruvate hydratase activity
ATY43_RS10695	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ATY43_RS10700	COG0504	CTP synthase activity
ATY43_RS10735	COG0306	phosphate transporter
ATY43_RS10745	COG1253	flavin adenine dinucleotide binding
ATY43_RS10760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATY43_RS10770	COG0477	Major facilitator Superfamily
ATY43_RS10780	COG1132	(ABC) transporter
ATY43_RS10785	COG1136	(ABC) transporter
ATY43_RS10800	COG0438	transferase activity, transferring glycosyl groups
ATY43_RS10810	COG2264	protein methyltransferase activity
ATY43_RS10840	COG2244	polysaccharide biosynthetic process
ATY43_RS10890	COG1595	DNA-templated transcription, initiation
ATY43_RS10905	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY43_RS10925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY43_RS10970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY43_RS10975	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY43_RS11005	COG2963	transposase activity
ATY43_RS11020	COG4644	lycopene metabolic process
ATY43_RS11030	COG1858	cytochrome C peroxidase
ATY43_RS11060	COG0515	serine threonine protein kinase
ATY43_RS11065	COG0631	protein serine/threonine phosphatase activity
ATY43_RS11110	COG3039	Transposase
ATY43_RS11175	COG3039	Transposase
ATY43_RS11235	COG2801	Transposase and inactivated derivatives
ATY43_RS11265	COG3064	Membrane
ATY43_RS11275	COG1530	ribonuclease E activity
ATY43_RS11285	COG3293	Transposase
ATY43_RS11295	COG1054	Belongs to the UPF0176 family
ATY43_RS11315	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATY43_RS11385	COG1648	precorrin-2 dehydrogenase activity
ATY43_RS11385	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ATY43_RS11410	COG0746	molybdenum cofactor guanylyltransferase activity
ATY43_RS11465	COG4206	TonB-dependent receptor
ATY43_RS11495	COG4206	TonB-dependent receptor
ATY43_RS11545	COG0531	amino acid
ATY43_RS11560	COG0006	proline dipeptidase activity
ATY43_RS11570	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY43_RS11585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY43_RS11590	COG3938	Belongs to the proline racemase family
ATY43_RS11600	COG0552	protein localization to endoplasmic reticulum
ATY43_RS11625	COG0784	Response regulator, receiver
ATY43_RS11625	COG4191	Histidine kinase
ATY43_RS11635	COG4191	Histidine kinase
ATY43_RS11635	COG0784	Response regulator, receiver
ATY43_RS11660	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY43_RS11775	COG0438	transferase activity, transferring glycosyl groups
ATY43_RS11785	COG0438	transferase activity, transferring glycosyl groups
ATY43_RS11790	COG0438	transferase activity, transferring glycosyl groups
ATY43_RS11845	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ATY43_RS11850	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ATY43_RS11860	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ATY43_RS11875	COG2963	transposase activity
ATY43_RS11900	COG0556	nucleotide-excision repair
ATY43_RS11905	COG4969	Belongs to the N-Me-Phe pilin family
ATY43_RS11945	COG3039	Transposase
ATY43_RS11950	COG1611	Belongs to the LOG family
ATY43_RS11965	COG2095	MarC family integral membrane protein
ATY43_RS11975	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY43_RS12010	COG1185	polyribonucleotide nucleotidyltransferase activity
ATY43_RS12015	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ATY43_RS12035	COG0195	Participates in both transcription termination and antitermination
ATY43_RS12040	COG0779	Required for maturation of 30S ribosomal subunits
ATY43_RS12050	COG1007	ATP synthesis coupled electron transport
ATY43_RS12080	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ATY43_RS12085	COG1034	ATP synthesis coupled electron transport
ATY43_RS12090	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ATY43_RS12095	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ATY43_RS12100	COG0649	NAD binding
ATY43_RS12105	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY43_RS12115	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY43_RS12130	COG0149	triose-phosphate isomerase activity
ATY43_RS12155	COG3293	Transposase
ATY43_RS12180	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY43_RS12185	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ATY43_RS12200	COG0133	tryptophan synthase activity
ATY43_RS12210	COG0135	phosphoribosylanthranilate isomerase activity
ATY43_RS12215	COG0101	tRNA pseudouridine synthase activity
ATY43_RS12235	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ATY43_RS12240	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATY43_RS12245	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ATY43_RS12250	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY43_RS12275	COG0433	COG0433 Predicted ATPase
ATY43_RS12280	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS12300	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY43_RS12310	COG0412	Dienelactone hydrolase
ATY43_RS12325	COG0717	Belongs to the dCTP deaminase family
ATY43_RS12330	COG0489	protein tyrosine kinase activity
ATY43_RS12365	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY43_RS12370	COG2311	Membrane
ATY43_RS12375	COG1047	Peptidyl-prolyl cis-trans
ATY43_RS12380	COG0791	NLP P60 protein
ATY43_RS12385	COG0791	NLP P60 protein
ATY43_RS12400	COG1301	dicarboxylic acid transport
ATY43_RS12405	COG1785	Belongs to the alkaline phosphatase family
ATY43_RS12410	COG0037	tRNA processing
ATY43_RS12415	COG1722	exodeoxyribonuclease VII activity
ATY43_RS12420	COG0142	geranyltranstransferase activity
ATY43_RS12440	COG0312	modulator of DNA gyrase
ATY43_RS12450	COG0312	modulator of DNA gyrase
ATY43_RS12475	COG2968	Membrane
ATY43_RS12485	COG3039	Transposase
ATY43_RS12520	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ATY43_RS12545	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ATY43_RS12570	COG3118	belongs to the thioredoxin family
ATY43_RS12585	COG3293	Transposase
ATY43_RS12630	COG3039	Transposase
ATY43_RS12640	COG3293	Transposase
ATY43_RS12655	COG3039	Transposase
ATY43_RS12680	COG3293	Transposase
ATY43_RS12685	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS12720	COG2963	transposase activity
ATY43_RS12755	COG2022	thiamine diphosphate biosynthetic process
ATY43_RS12765	COG0471	metal ion transport
ATY43_RS12765	COG3273	potassium ion transport
ATY43_RS12800	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS12810	COG1970	mechanosensitive ion channel activity
ATY43_RS12845	COG2272	Belongs to the type-B carboxylesterase lipase family
ATY43_RS12850	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY43_RS12880	COG0308	aminopeptidase N
ATY43_RS12885	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY43_RS12895	COG0529	Catalyzes the synthesis of activated sulfate
ATY43_RS12895	COG2895	sulfate adenylyltransferase (ATP) activity
ATY43_RS12900	COG0175	sulfate reduction
ATY43_RS12905	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ATY43_RS12910	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ATY43_RS12915	COG0175	sulfate reduction
ATY43_RS12935	COG2205	protein histidine kinase activity
ATY43_RS12935	COG2198	Histidine kinase
ATY43_RS12935	COG0784	Response regulator, receiver
ATY43_RS12990	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ATY43_RS12995	COG3588	fructose-bisphosphate aldolase
ATY43_RS13000	COG0469	pyruvate kinase activity
ATY43_RS13010	COG0126	phosphoglycerate kinase activity
ATY43_RS13050	COG0753	catalase activity
ATY43_RS13075	COG1917	Cupin 2, conserved barrel domain protein
ATY43_RS13075	COG2207	Transcriptional regulator
ATY43_RS13100	COG0823	Involved in the tonB-independent uptake of proteins
ATY43_RS13100	COG1506	peptidase
ATY43_RS13125	COG1297	OPT oligopeptide transporter protein
ATY43_RS13140	COG0587	DNA-directed DNA polymerase activity
ATY43_RS13225	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ATY43_RS13230	COG0732	type I restriction modification DNA specificity domain
ATY43_RS13235	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
ATY43_RS13240	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ATY43_RS13260	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
ATY43_RS13275	COG0732	type I restriction modification DNA specificity domain
ATY43_RS13440	COG2963	transposase activity
ATY43_RS13445	COG2801	Transposase and inactivated derivatives
ATY43_RS13505	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY43_RS13555	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY43_RS13565	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY43_RS13625	COG2963	transposase activity
ATY43_RS13655	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ATY43_RS13670	COG2197	response regulator
ATY43_RS13675	COG4585	Histidine kinase
ATY43_RS13700	COG2894	cell division
ATY43_RS13705	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ATY43_RS13715	COG0642	Histidine kinase
ATY43_RS13720	COG0745	RESPONSE REGULATOR receiver
ATY43_RS13725	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ATY43_RS13735	COG2194	sulfuric ester hydrolase activity
ATY43_RS13765	COG3551	Protein conserved in bacteria
ATY43_RS13810	COG2963	transposase activity
ATY43_RS13835	COG0203	ribosomal protein L17
ATY43_RS13845	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ATY43_RS13850	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ATY43_RS13860	COG0201	protein transport
ATY43_RS13870	COG1841	ribosomal large subunit assembly
ATY43_RS13880	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ATY43_RS13900	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ATY43_RS13905	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ATY43_RS13910	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ATY43_RS13915	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ATY43_RS13920	COG0255	Belongs to the universal ribosomal protein uL29 family
ATY43_RS13925	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ATY43_RS13950	COG0089	rRNA binding
ATY43_RS13955	COG0088	Forms part of the polypeptide exit tunnel
ATY43_RS13960	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ATY43_RS13965	COG0051	transcription antitermination factor activity, RNA binding
ATY43_RS13985	COG0049	tRNA binding
ATY43_RS13990	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ATY43_RS13995	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ATY43_RS14000	COG0085	RNA polymerase activity
ATY43_RS14005	COG0222	ribosome binding
ATY43_RS14010	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ATY43_RS14020	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ATY43_RS14025	COG0250	Participates in transcription elongation, termination and antitermination
ATY43_RS14030	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ATY43_RS14060	COG0012	GTP binding
ATY43_RS14065	COG0193	aminoacyl-tRNA hydrolase activity
ATY43_RS14075	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ATY43_RS14090	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ATY43_RS14105	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATY43_RS14115	COG0521	Mo-molybdopterin cofactor biosynthetic process
ATY43_RS14135	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY43_RS14140	COG1295	ribonuclease BN
ATY43_RS14170	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ATY43_RS14175	COG1404	Belongs to the peptidase S8 family
ATY43_RS14180	COG1404	Belongs to the peptidase S8 family
ATY43_RS14190	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ATY43_RS14220	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ATY43_RS14245	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ATY43_RS14260	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY43_RS14260	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY43_RS14300	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY43_RS14310	COG3634	alkyl hydroperoxide reductase activity
ATY43_RS14315	COG0583	DNA-binding transcription factor activity
ATY43_RS14320	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY43_RS14325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATY43_RS14365	COG2197	response regulator
ATY43_RS14420	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS14430	COG3293	Transposase
ATY43_RS14485	COG3386	PFAM SMP-30 Gluconolaconase
ATY43_RS14505	COG1024	Enoyl-CoA hydratase
ATY43_RS14515	COG0318	PFAM AMP-dependent synthetase and ligase
ATY43_RS14520	COG0583	DNA-binding transcription factor activity
ATY43_RS14560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY43_RS14565	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY43_RS14575	COG2096	Adenosyltransferase
ATY43_RS14580	COG0123	including yeast histone deacetylase and acetoin utilization protein
ATY43_RS14595	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ATY43_RS14605	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ATY43_RS14610	COG2967	ApaG domain
ATY43_RS14635	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ATY43_RS14655	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ATY43_RS14670	COG0642	Histidine kinase
ATY43_RS14685	COG4181	ATPase activity
ATY43_RS14695	COG2175	clavaminate synthase activity
ATY43_RS14705	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ATY43_RS14750	COG3293	Transposase
ATY43_RS14765	COG0667	Aldo Keto reductase
ATY43_RS14775	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ATY43_RS14780	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY43_RS14795	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY43_RS14800	COG4106	trans-aconitate 2-methyltransferase activity
ATY43_RS14810	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ATY43_RS14845	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ATY43_RS14850	COG2226	methyltransferase
ATY43_RS14905	COG3321	synthase
ATY43_RS14905	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS14905	COG0604	alcohol dehydrogenase
ATY43_RS14915	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ATY43_RS14940	COG0494	nUDIX hydrolase
ATY43_RS14955	COG4942	peptidase
ATY43_RS14955	COG1388	LysM domain
ATY43_RS14965	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ATY43_RS14980	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ATY43_RS14985	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY43_RS14990	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY43_RS15010	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ATY43_RS15025	COG3116	cell division
ATY43_RS15030	COG0275	rRNA processing
ATY43_RS15065	COG0792	nuclease activity
ATY43_RS15070	COG1988	membrane-bound metal-dependent
ATY43_RS15075	COG0277	FAD linked oxidase domain protein
ATY43_RS15080	COG0745	RESPONSE REGULATOR receiver
ATY43_RS15085	COG2205	protein histidine kinase activity
ATY43_RS15095	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ATY43_RS15100	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ATY43_RS15125	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ATY43_RS15130	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY43_RS15135	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ATY43_RS15155	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY43_RS15155	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY43_RS15175	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ATY43_RS15195	COG0488	(ABC) transporter
ATY43_RS15220	COG3791	Glutathione-dependent formaldehyde-activating
ATY43_RS15250	COG2205	protein histidine kinase activity
ATY43_RS15295	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ATY43_RS15320	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ATY43_RS15330	COG2963	transposase activity
ATY43_RS15335	COG3039	Transposase
ATY43_RS15340	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY43_RS15410	COG3293	Transposase
ATY43_RS15445	COG1649	PFAM Uncharacterised BCR, COG1649
ATY43_RS15445	COG0726	polysaccharide deacetylase
ATY43_RS15450	COG1215	transferase activity, transferring glycosyl groups
ATY43_RS15460	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ATY43_RS15465	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY43_RS15470	COG1609	Transcriptional regulator
ATY43_RS15480	COG2188	Transcriptional regulator
ATY43_RS15505	COG2963	transposase activity
ATY43_RS15515	COG2801	Transposase and inactivated derivatives
ATY43_RS15535	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ATY43_RS15540	COG4191	Histidine kinase
ATY43_RS15545	COG0784	Response regulator, receiver
ATY43_RS15550	COG4251	negative regulation of phosphorylation
ATY43_RS15555	COG2823	Periplasmic or secreted lipoprotein
ATY43_RS15560	COG0673	inositol 2-dehydrogenase activity
ATY43_RS15565	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ATY43_RS15605	COG1051	belongs to the nudix hydrolase family
ATY43_RS15605	COG1056	cytidyltransferase-related domain
ATY43_RS15630	COG2921	Belongs to the UPF0250 family
ATY43_RS15640	COG1686	Belongs to the peptidase S11 family
ATY43_RS15650	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ATY43_RS15655	COG2951	lytic endotransglycosylase activity
ATY43_RS15665	COG3039	Transposase
ATY43_RS15710	COG0772	Belongs to the SEDS family
ATY43_RS15725	COG1792	Involved in formation and maintenance of cell shape
ATY43_RS15730	COG1077	Cell shape determining protein MreB Mrl
ATY43_RS15735	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY43_RS15740	COG3039	Transposase
ATY43_RS15800	COG2199	diguanylate cyclase activity
ATY43_RS15805	COG0308	aminopeptidase N
ATY43_RS15835	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ATY43_RS15865	COG0436	Aminotransferase
ATY43_RS15880	COG1505	serine-type exopeptidase activity
ATY43_RS15905	COG0181	hydroxymethylbilane synthase activity
ATY43_RS15915	COG3275	phosphorelay sensor kinase activity
ATY43_RS15935	COG3293	Transposase
ATY43_RS15965	COG0659	secondary active sulfate transmembrane transporter activity
ATY43_RS15970	COG5297	Belongs to the glycosyl hydrolase family 6
ATY43_RS15970	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY43_RS15980	COG0840	transmembrane signaling receptor activity
ATY43_RS16015	COG3293	Transposase
ATY43_RS16055	COG0598	Magnesium transport protein CorA
ATY43_RS16065	COG1113	amino acid transport
ATY43_RS16070	COG5297	Belongs to the glycosyl hydrolase family 6
ATY43_RS16075	COG4305	rare lipoprotein A
ATY43_RS16080	COG0697	spore germination
ATY43_RS16150	COG4221	oxidoreductase activity
ATY43_RS16165	COG2963	transposase activity
ATY43_RS16185	COG0456	acetyltransferase
ATY43_RS16195	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ATY43_RS16225	COG3227	Zinc metalloprotease (Elastase)
ATY43_RS16240	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY43_RS16240	COG2111	Na H antiporter
ATY43_RS16245	COG1006	Multisubunit Na H antiporter MnhC subunit
ATY43_RS16250	COG0651	ATP synthesis coupled electron transport
ATY43_RS16260	COG2212	antiporter activity
ATY43_RS16265	COG1320	monovalent cation:proton antiporter activity
ATY43_RS16290	COG3104	oligopeptide transport
ATY43_RS16295	COG3483	tryptophan 2,3-dioxygenase activity
ATY43_RS16305	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ATY43_RS16320	COG0022	dehydrogenase e1 component
ATY43_RS16335	COG0183	Belongs to the thiolase family
ATY43_RS16385	COG3039	Transposase
ATY43_RS16420	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ATY43_RS16425	COG3039	Transposase
ATY43_RS16430	COG3023	N-Acetylmuramoyl-L-alanine amidase
ATY43_RS16440	COG4948	Mandelate Racemase Muconate Lactonizing
ATY43_RS16470	COG0531	amino acid
ATY43_RS16480	COG3293	Transposase
ATY43_RS16500	COG4682	membrane
ATY43_RS16510	COG2133	pyrroloquinoline quinone binding
ATY43_RS16560	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS16570	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ATY43_RS16575	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ATY43_RS16585	COG1610	YqeY-like protein
ATY43_RS16590	COG3039	Transposase
ATY43_RS16600	COG3293	Transposase
ATY43_RS16620	COG3039	Transposase
ATY43_RS16645	COG2205	protein histidine kinase activity
ATY43_RS16655	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ATY43_RS16665	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ATY43_RS16675	COG0643	Histidine kinase
ATY43_RS16675	COG2198	Histidine kinase
ATY43_RS16680	COG0840	transmembrane signaling receptor activity
ATY43_RS16685	COG0835	chemotaxis
ATY43_RS16690	COG2199	diguanylate cyclase activity
ATY43_RS16690	COG2202	Pas domain
ATY43_RS16690	COG2200	EAL domain
ATY43_RS16695	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ATY43_RS16710	COG3590	peptidase
ATY43_RS16725	COG0588	phosphoglycerate mutase activity
ATY43_RS16730	COG1515	deoxyribonuclease V activity
ATY43_RS16740	COG1741	Belongs to the pirin family
ATY43_RS16790	COG3039	Transposase
ATY43_RS16835	COG1741	Belongs to the pirin family
ATY43_RS16840	COG1966	Carbon starvation protein
ATY43_RS16845	COG2879	small protein
ATY43_RS16875	COG3321	synthase
ATY43_RS16875	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS16875	COG0604	alcohol dehydrogenase
ATY43_RS16880	COG2203	Gaf domain
ATY43_RS16880	COG3706	GGDEF domain
ATY43_RS16880	COG5001	Diguanylate cyclase
ATY43_RS16880	COG4251	negative regulation of phosphorylation
ATY43_RS16890	COG0629	single-stranded DNA binding
ATY43_RS16895	COG0142	geranyltranstransferase activity
ATY43_RS16925	COG0527	aspartate kinase activity
ATY43_RS16935	COG0384	phenazine biosynthesis protein PhzF
ATY43_RS16940	COG3293	Transposase
ATY43_RS16955	COG1764	response to oxidative stress
ATY43_RS16970	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ATY43_RS16975	COG1678	Uncharacterized ACR, COG1678
ATY43_RS16990	COG0519	Catalyzes the synthesis of GMP from XMP
ATY43_RS17015	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATY43_RS17055	COG0693	protein deglycase activity
ATY43_RS17075	COG1959	2 iron, 2 sulfur cluster binding
ATY43_RS17080	COG0719	Fe-S assembly protein
ATY43_RS17085	COG0396	ATPase activity
ATY43_RS17090	COG0719	Fe-S assembly protein
ATY43_RS17095	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ATY43_RS17105	COG2146	nitrite reductase [NAD(P)H] activity
ATY43_RS17110	COG3039	Transposase
ATY43_RS17115	COG2963	transposase activity
ATY43_RS17120	COG2801	Transposase and inactivated derivatives
ATY43_RS17150	COG3328	transposase activity
ATY43_RS17160	COG2963	transposase activity
ATY43_RS17185	COG0326	Molecular chaperone. Has ATPase activity
ATY43_RS17190	COG2207	Transcriptional regulator
ATY43_RS17210	COG0657	acetylesterase activity
ATY43_RS17210	COG2755	lipolytic protein G-D-S-L family
ATY43_RS17235	COG0488	(ABC) transporter
ATY43_RS17280	COG4651	solute:proton antiporter activity
ATY43_RS17280	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY43_RS17285	COG2801	Transposase and inactivated derivatives
ATY43_RS17295	COG4772	TonB-dependent receptor
ATY43_RS17305	COG4264	IucA IucC family
ATY43_RS17310	COG2814	Major facilitator Superfamily
ATY43_RS17320	COG0019	diaminopimelate decarboxylase activity
ATY43_RS17380	COG4206	TonB-dependent receptor
ATY43_RS17395	COG2963	transposase activity
ATY43_RS17410	COG0542	response to heat
ATY43_RS17455	COG0534	Mate efflux family protein
ATY43_RS17470	COG0336	Belongs to the RNA methyltransferase TrmD family
ATY43_RS17475	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ATY43_RS17480	COG0228	four-way junction DNA binding
ATY43_RS17505	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ATY43_RS17515	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY43_RS17570	COG1555	photosystem II stabilization
ATY43_RS17575	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY43_RS17590	COG3178	'Phosphotransferase
ATY43_RS17595	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ATY43_RS17605	COG0628	permease
ATY43_RS17615	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ATY43_RS17630	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ATY43_RS17650	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ATY43_RS17655	COG0271	Belongs to the BolA IbaG family
ATY43_RS17665	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ATY43_RS17675	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ATY43_RS17680	COG1137	ATPase activity
ATY43_RS17695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY43_RS17700	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ATY43_RS17705	COG1660	Displays ATPase and GTPase activities
ATY43_RS17715	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY43_RS17720	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY43_RS17730	COG2239	Acts as a magnesium transporter
ATY43_RS17740	COG1294	oxidase, subunit
ATY43_RS17745	COG1271	oxidase subunit
ATY43_RS17755	COG1113	amino acid transport
ATY43_RS17770	COG2197	response regulator
ATY43_RS17775	COG0531	amino acid
ATY43_RS17855	COG0754	glutathionylspermidine amidase activity
ATY43_RS17880	COG1842	Phage shock protein A
ATY43_RS17895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ATY43_RS17900	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ATY43_RS17910	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ATY43_RS17945	COG2201	protein-glutamate methylesterase activity
ATY43_RS18010	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATY43_RS18030	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ATY43_RS18065	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATY43_RS18070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY43_RS18105	COG3039	Transposase
ATY43_RS18130	COG0745	RESPONSE REGULATOR receiver
ATY43_RS18135	COG2205	protein histidine kinase activity
ATY43_RS18150	COG3293	Transposase
ATY43_RS18155	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ATY43_RS18200	COG3453	Protein conserved in bacteria
ATY43_RS18200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY43_RS18205	COG0725	ABC transporter, periplasmic molybdate-binding protein
ATY43_RS18210	COG4149	molybdate abc transporter
ATY43_RS18215	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ATY43_RS18235	COG0642	Histidine kinase
ATY43_RS18250	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS18260	COG1022	Amp-dependent synthetase and ligase
ATY43_RS18285	COG1376	ErfK ybiS ycfS ynhG family protein
ATY43_RS18290	COG0739	heme binding
ATY43_RS18295	COG4773	Receptor
ATY43_RS18300	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ATY43_RS18305	COG1301	dicarboxylic acid transport
ATY43_RS18325	COG2304	oxidoreductase activity
ATY43_RS18345	COG0714	Associated with various cellular activities
ATY43_RS18400	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ATY43_RS18430	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ATY43_RS18440	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY43_RS18470	COG1561	YicC-like family, N-terminal region
ATY43_RS18475	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ATY43_RS18490	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ATY43_RS18520	COG0006	proline dipeptidase activity
ATY43_RS18545	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ATY43_RS18555	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ATY43_RS18565	COG2912	Transglutaminase-like superfamily
ATY43_RS18570	COG1773	rubredoxin
ATY43_RS18575	COG0352	thiamine-phosphate diphosphorylase activity
ATY43_RS18600	COG2801	Transposase and inactivated derivatives
ATY43_RS18605	COG2963	transposase activity
ATY43_RS18615	COG0280	phosphate acetyltransferase
ATY43_RS18615	COG0281	malic enzyme
ATY43_RS18635	COG4191	Histidine kinase
ATY43_RS18650	COG0583	DNA-binding transcription factor activity
ATY43_RS18665	COG2197	response regulator
ATY43_RS18675	COG0642	Histidine kinase
ATY43_RS18690	COG2851	Citrate transporter
ATY43_RS18695	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS18700	COG1609	Transcriptional regulator
ATY43_RS18760	COG0726	polysaccharide deacetylase
ATY43_RS18765	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY43_RS18810	COG0242	peptide deformylase activity
ATY43_RS18830	COG0714	Associated with various cellular activities
ATY43_RS18850	COG0537	adenosine 5'-monophosphoramidase activity
ATY43_RS18885	COG0314	molybdopterin synthase activity
ATY43_RS18890	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ATY43_RS18895	COG0315	cyclic pyranopterin monophosphate synthase activity
ATY43_RS18905	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ATY43_RS18910	COG1234	tRNA 3'-trailer cleavage
ATY43_RS18915	COG3642	lipopolysaccharide core region biosynthetic process
ATY43_RS18920	COG0859	PFAM glycosyl transferase family 9
ATY43_RS18930	COG0582	viral genome integration into host DNA
ATY43_RS19015	COG0631	protein serine/threonine phosphatase activity
ATY43_RS19025	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY43_RS19050	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ATY43_RS19090	COG0544	peptidyl-prolyl cis-trans isomerase activity
ATY43_RS19115	COG2963	transposase activity
ATY43_RS19145	COG0473	3-isopropylmalate dehydrogenase activity
ATY43_RS19175	COG4783	chaperone-mediated protein folding
ATY43_RS19190	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ATY43_RS19200	COG0438	transferase activity, transferring glycosyl groups
ATY43_RS19205	COG0671	phosphoesterase, PA-phosphatase related
ATY43_RS19210	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY43_RS19225	COG2833	Protein of unknown function (DUF455)
ATY43_RS19245	COG0285	dihydrofolate synthase activity
ATY43_RS19255	COG0406	alpha-ribazole phosphatase activity
ATY43_RS19285	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ATY43_RS19290	COG4208	sulfate ABC transporter
ATY43_RS19295	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ATY43_RS19300	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ATY43_RS19305	COG0156	8-amino-7-oxononanoate synthase activity
ATY43_RS19330	COG0604	alcohol dehydrogenase
ATY43_RS19335	COG0446	pyridine nucleotide-disulphide oxidoreductase
ATY43_RS19335	COG1902	pentaerythritol trinitrate reductase activity
ATY43_RS19350	COG3293	Transposase
ATY43_RS19380	COG0584	glycerophosphoryl diester phosphodiesterase
ATY43_RS19390	COG3293	Transposase
ATY43_RS19410	COG3039	Transposase
ATY43_RS19425	COG0625	glutathione transferase activity
ATY43_RS19435	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ATY43_RS19440	COG1217	gtp-binding protein TYPA
ATY43_RS19460	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ATY43_RS19480	COG2963	transposase activity
ATY43_RS19530	COG2963	transposase activity
ATY43_RS19580	COG3293	Transposase
ATY43_RS19605	COG3781	membrane
ATY43_RS19615	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY43_RS19655	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ATY43_RS19690	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ATY43_RS19700	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ATY43_RS19735	COG0066	3-isopropylmalate dehydratase activity
ATY43_RS19740	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ATY43_RS19775	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY43_RS19780	COG1538	Outer membrane efflux protein
ATY43_RS19785	COG1519	Transferase
ATY43_RS19790	COG1560	Kdo2-lipid A biosynthetic process
ATY43_RS19830	COG0308	aminopeptidase N
ATY43_RS19835	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ATY43_RS19845	COG0330	HflC and HflK could
ATY43_RS19850	COG0330	HflC and HflK could
ATY43_RS19870	COG0678	peroxiredoxin activity
ATY43_RS19935	COG3829	transcription factor binding
ATY43_RS19960	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ATY43_RS19965	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ATY43_RS19975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY43_RS19980	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS20005	COG1399	metal-binding, possibly nucleic acid-binding protein
ATY43_RS20045	COG1518	maintenance of DNA repeat elements
ATY43_RS20050	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ATY43_RS20090	COG2188	Transcriptional regulator
ATY43_RS20105	COG1450	Type ii and iii secretion system protein
ATY43_RS20120	COG3166	PFAM Fimbrial assembly family protein
ATY43_RS20125	COG3156	type II secretion system protein K
ATY43_RS20130	COG4795	General secretion pathway protein
ATY43_RS20135	COG2165	general secretion pathway protein
ATY43_RS20140	COG4970	Tfp pilus assembly protein FimT
ATY43_RS20145	COG2165	general secretion pathway protein
ATY43_RS20150	COG1459	type II secretion system
ATY43_RS20160	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY43_RS20170	COG5295	Hep Hag repeat protein
ATY43_RS20175	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ATY43_RS20175	COG0047	phosphoribosylformylglycinamidine synthase activity
ATY43_RS20180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ATY43_RS20185	COG4974	Belongs to the 'phage' integrase family
ATY43_RS20200	COG0795	lipopolysaccharide-transporting ATPase activity
ATY43_RS20210	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY43_RS20225	COG0525	valine-tRNA ligase activity
ATY43_RS20235	COG2963	transposase activity
ATY43_RS20240	COG2801	Transposase and inactivated derivatives
ATY43_RS20275	COG3039	Transposase
ATY43_RS20305	COG1183	phosphatidylcholine synthase activity
ATY43_RS20315	COG0442	prolyl-tRNA aminoacylation
ATY43_RS20330	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY43_RS20335	COG1127	ABC transporter
ATY43_RS20340	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY43_RS20340	COG3218	ABC-type transport auxiliary lipoprotein component
ATY43_RS20375	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY43_RS20380	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ATY43_RS20380	COG0662	Cupin 2, conserved barrel domain protein
ATY43_RS20405	COG2086	electron transfer activity
ATY43_RS20430	COG3328	transposase activity
ATY43_RS20475	COG0626	cystathionine gamma-synthase activity
ATY43_RS20505	COG0625	glutathione transferase activity
ATY43_RS20515	COG0513	Belongs to the DEAD box helicase family
ATY43_RS20525	COG0720	synthase
ATY43_RS20535	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ATY43_RS20540	COG1956	GAF domain-containing protein
ATY43_RS20575	COG0339	signal peptide processing
ATY43_RS20615	COG3293	Transposase
ATY43_RS20630	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY43_RS20635	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY43_RS20640	COG3842	ATPase activity
ATY43_RS20695	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ATY43_RS20700	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ATY43_RS20705	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ATY43_RS20715	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ATY43_RS20725	COG0356	it plays a direct role in the translocation of protons across the membrane
ATY43_RS20745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATY43_RS20755	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY43_RS20785	COG2011	ABC-type metal ion transport system permease component
ATY43_RS20795	COG0697	spore germination
ATY43_RS20830	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ATY43_RS20835	COG1187	pseudouridine synthase activity
ATY43_RS20840	COG2813	Specifically methylates the guanine in position
ATY43_RS20870	COG2205	protein histidine kinase activity
ATY43_RS20870	COG2202	Pas domain
ATY43_RS20895	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY43_RS20945	COG0745	RESPONSE REGULATOR receiver
ATY43_RS20960	COG1404	Belongs to the peptidase S8 family
ATY43_RS20980	COG0842	Transport permease protein
ATY43_RS20985	COG1131	(ABC) transporter
ATY43_RS20990	COG0025	NhaP-type Na H and K H
ATY43_RS21005	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
ATY43_RS21015	COG1573	uracil-dna glycosylase
ATY43_RS21025	COG3384	dioxygenase
ATY43_RS21040	COG0667	Aldo Keto reductase
ATY43_RS21055	COG3590	peptidase
ATY43_RS21075	COG0531	amino acid
ATY43_RS21085	COG3279	Response regulator of the LytR AlgR family
ATY43_RS21090	COG3279	Response regulator of the LytR AlgR family
ATY43_RS21095	COG2972	Histidine kinase
ATY43_RS21135	COG2963	transposase activity
ATY43_RS21160	COG2204	response regulator
ATY43_RS21170	COG1271	oxidase subunit
ATY43_RS21175	COG1294	oxidase, subunit
ATY43_RS21185	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS21200	COG3039	Transposase
ATY43_RS21260	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
ATY43_RS21270	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ATY43_RS21285	COG2963	transposase activity
ATY43_RS21325	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ATY43_RS21330	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ATY43_RS21335	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ATY43_RS21345	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ATY43_RS21350	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY43_RS21365	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ATY43_RS21390	COG2963	transposase activity
ATY43_RS21395	COG2801	Transposase and inactivated derivatives
ATY43_RS21540	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY43_RS21550	COG1560	Kdo2-lipid A biosynthetic process
ATY43_RS21600	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ATY43_RS21600	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY43_RS21605	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ATY43_RS21610	COG0242	peptide deformylase activity
ATY43_RS21615	COG1652	LysM domain
ATY43_RS21620	COG0758	DNA mediated transformation
ATY43_RS21625	COG2922	Belongs to the Smg family
ATY43_RS21640	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ATY43_RS21640	COG1754	DNA topoisomerase type I activity
ATY43_RS21645	COG0009	L-threonylcarbamoyladenylate synthase
ATY43_RS21660	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS21670	COG0616	signal peptide processing
ATY43_RS21675	COG0534	Mate efflux family protein
ATY43_RS21695	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ATY43_RS21715	COG1324	tolerance protein
ATY43_RS21730	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ATY43_RS21735	COG0511	ligase activity, forming carbon-carbon bonds
ATY43_RS21745	COG0439	Biotin carboxylase
ATY43_RS21785	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ATY43_RS21820	COG3210	domain, Protein
ATY43_RS21825	COG2831	hemolysin activation secretion protein
ATY43_RS21850	COG2453	phosphatase
ATY43_RS21850	COG0671	phosphoesterase, PA-phosphatase related
ATY43_RS21855	COG2267	carboxylic ester hydrolase activity
ATY43_RS21865	COG2267	carboxylic ester hydrolase activity
ATY43_RS21870	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ATY43_RS21885	COG0151	Belongs to the GarS family
ATY43_RS21890	COG0577	efflux transmembrane transporter activity
ATY43_RS21890	COG1136	(ABC) transporter
ATY43_RS21900	COG1289	transmembrane transporter activity
ATY43_RS21915	COG2814	Major facilitator Superfamily
ATY43_RS21935	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ATY43_RS21975	COG0745	RESPONSE REGULATOR receiver
ATY43_RS21985	COG2963	transposase activity
ATY43_RS22025	COG0739	heme binding
ATY43_RS22040	COG2211	Major facilitator Superfamily
ATY43_RS22045	COG0708	Exodeoxyribonuclease III
ATY43_RS22060	COG1192	Involved in chromosome partitioning
ATY43_RS22065	COG1475	DNA binding
ATY43_RS22080	COG0463	Glycosyl transferase, family 2
ATY43_RS22105	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ATY43_RS22130	COG4221	oxidoreductase activity
ATY43_RS22135	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS22145	COG1414	Transcriptional regulator
ATY43_RS22155	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATY43_RS22160	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY43_RS22165	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ATY43_RS22175	COG3485	protocatechuate 3,4-dioxygenase
ATY43_RS22180	COG3485	protocatechuate 3,4-dioxygenase
ATY43_RS22190	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ATY43_RS22200	COG2963	transposase activity
ATY43_RS22225	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY43_RS22230	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY43_RS22240	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY43_RS22240	COG1042	CoA-binding domain protein
ATY43_RS22240	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ATY43_RS22250	COG2239	Acts as a magnesium transporter
ATY43_RS22265	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY43_RS22270	COG3387	PFAM Glycoside hydrolase 15-related
ATY43_RS22285	COG3100	YcgL domain-containing protein
ATY43_RS22290	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATY43_RS22300	COG0463	Glycosyl transferase, family 2
ATY43_RS22315	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS22325	COG0156	8-amino-7-oxononanoate synthase activity
ATY43_RS22330	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ATY43_RS22335	COG1040	competence protein
ATY43_RS22340	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ATY43_RS22350	COG0628	permease
ATY43_RS22360	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY43_RS22370	COG1595	DNA-templated transcription, initiation
ATY43_RS22375	COG0753	catalase activity
ATY43_RS22425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY43_RS22430	COG0180	Tryptophanyl-tRNA synthetase
ATY43_RS22435	COG3237	CsbD-like
ATY43_RS22470	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ATY43_RS22485	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ATY43_RS22490	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ATY43_RS22490	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ATY43_RS22530	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY43_RS22555	COG1566	PFAM secretion protein HlyD family protein
ATY43_RS22575	COG3039	Transposase
ATY43_RS22580	COG1199	ATP-dependent helicase activity
ATY43_RS22615	COG0583	DNA-binding transcription factor activity
ATY43_RS22660	COG0625	glutathione transferase activity
ATY43_RS22695	COG4555	ABC transporter
ATY43_RS22705	COG1476	TRANSCRIPTIONal
ATY43_RS22730	COG1131	(ABC) transporter
ATY43_RS22735	COG0842	Transport permease protein
ATY43_RS22745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ATY43_RS22780	COG2801	Transposase and inactivated derivatives
ATY43_RS22790	COG3293	Transposase
ATY43_RS22825	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY43_RS22840	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY43_RS22850	COG0564	pseudouridine synthase activity
ATY43_RS22875	COG0339	signal peptide processing
ATY43_RS22900	COG3254	rhamnose metabolic process
ATY43_RS22905	COG0738	Major facilitator superfamily
ATY43_RS22910	COG1414	Transcriptional regulator
ATY43_RS22920	COG3293	Transposase
ATY43_RS22930	COG2205	protein histidine kinase activity
ATY43_RS22945	COG3459	Glycosyltransferase 36 associated
ATY43_RS22950	COG2211	Major facilitator Superfamily
ATY43_RS22955	COG3265	gluconokinase activity
ATY43_RS22960	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY43_RS22980	COG2963	transposase activity
ATY43_RS22985	COG2801	Transposase and inactivated derivatives
ATY43_RS23010	COG3039	Transposase
ATY43_RS23055	COG1127	ABC transporter
ATY43_RS23060	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY43_RS23065	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY43_RS23080	COG2853	Lipoprotein
ATY43_RS23100	COG3293	Transposase
ATY43_RS23110	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ATY43_RS23120	COG2963	transposase activity
ATY43_RS23155	COG3135	benzoate transporter
ATY43_RS23160	COG3135	benzoate transporter
ATY43_RS23180	COG0676	glucose-6-phosphate 1-epimerase activity
ATY43_RS23205	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY43_RS23215	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY43_RS23220	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY43_RS23225	COG1064	alcohol dehydrogenase
ATY43_RS23265	COG2826	transposase and inactivated derivatives, IS30 family
ATY43_RS23270	COG4773	Receptor
ATY43_RS23295	COG1522	sequence-specific DNA binding
ATY43_RS23300	COG3186	Phenylalanine-4-hydroxylase
ATY43_RS23310	COG2755	lipolytic protein G-D-S-L family
ATY43_RS23325	COG2963	transposase activity
ATY43_RS23340	COG0656	L-ascorbic acid biosynthetic process
ATY43_RS23345	COG2130	NADP-dependent
ATY43_RS23350	COG0667	Aldo Keto reductase
ATY43_RS23360	COG1187	pseudouridine synthase activity
ATY43_RS23375	COG1643	Atp-dependent helicase
ATY43_RS23380	COG4807	Protein conserved in bacteria
ATY43_RS23385	COG4948	Mandelate Racemase Muconate Lactonizing
ATY43_RS23390	COG0179	Fumarylacetoacetate (FAA) hydrolase
ATY43_RS23395	COG1028	Short-chain dehydrogenase reductase Sdr
ATY43_RS23415	COG3507	Belongs to the glycosyl hydrolase 43 family
ATY43_RS23460	COG3162	membrane
ATY43_RS23465	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATY43_RS23480	COG0708	Exodeoxyribonuclease III
ATY43_RS23495	COG2091	lysine biosynthetic process via aminoadipic acid
ATY43_RS23505	COG3540	Alkaline phosphatase
ATY43_RS23530	COG2159	amidohydrolase
ATY43_RS23540	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY43_RS23545	COG0583	DNA-binding transcription factor activity
ATY43_RS23550	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY43_RS23565	COG0210	DNA helicase
ATY43_RS23580	COG0531	amino acid
ATY43_RS23585	COG1322	Protein conserved in bacteria
ATY43_RS23595	COG0386	Belongs to the glutathione peroxidase family
ATY43_RS23610	COG3293	Transposase
ATY43_RS23650	COG0793	Belongs to the peptidase S41A family
ATY43_RS23655	COG4942	peptidase
ATY43_RS23665	COG2234	aminopeptidase activity
ATY43_RS23715	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATY43_RS23720	COG0302	gtp cyclohydrolase
ATY43_RS23740	COG0477	Major facilitator Superfamily
ATY43_RS23825	COG1929	Belongs to the glycerate kinase type-1 family
ATY43_RS23830	COG2271	Major facilitator Superfamily
ATY43_RS23845	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY43_RS23850	COG0861	Integral membrane protein TerC family
ATY43_RS23860	COG0584	glycerophosphoryl diester phosphodiesterase
ATY43_RS23870	COG0671	phosphoesterase, PA-phosphatase related
ATY43_RS23880	COG0726	polysaccharide deacetylase