ATY43_RS00005	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
ATY43_RS00010	SM00480	DNA polymerase III beta subunit
ATY43_RS00020	SM00387	Histidine kinase-like ATPases
ATY43_RS00020	SM00433	TopoisomeraseII
ATY43_RS00035	SM00028	Tetratricopeptide repeats
ATY43_RS00070	SM00155	Phospholipase D. Active site motifs.
ATY43_RS00200	SM01126	ATY43_RS00200
ATY43_RS00285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS00310	SM00369	Leucine-rich repeats, typical (most populated) subfamily
ATY43_RS00420	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS00515	SM00267	diguanylate cyclase
ATY43_RS00525	SM00642	Alpha-amylase domain
ATY43_RS00530	SM00642	Alpha-amylase domain
ATY43_RS00540	SM00642	Alpha-amylase domain
ATY43_RS00550	SM00642	Alpha-amylase domain
ATY43_RS00585	SM01126	ATY43_RS00585
ATY43_RS00630	SM00487	DEAD-like helicases superfamily
ATY43_RS00630	SM00490	helicase superfamily c-terminal domain
ATY43_RS00655	SM01126	ATY43_RS00655
ATY43_RS00715	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS00735	SM01126	ATY43_RS00735
ATY43_RS00760	SM00487	DEAD-like helicases superfamily
ATY43_RS00760	SM00490	helicase superfamily c-terminal domain
ATY43_RS00835	SM01126	ATY43_RS00835
ATY43_RS00870	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS00890	SM00642	Alpha-amylase domain
ATY43_RS00895	SM00642	Alpha-amylase domain
ATY43_RS00900	SM00642	Alpha-amylase domain
ATY43_RS00915	SM01126	ATY43_RS00915
ATY43_RS00945	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS00955	SM00938	Nitrogen regulatory protein P-II
ATY43_RS00970	SM01126	ATY43_RS00970
ATY43_RS01025	SM01228	ATY43_RS01025
ATY43_RS01090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS01090	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS01125	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ATY43_RS01145	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS01155	SM00563	Phosphate acyltransferases
ATY43_RS01160	SM00829	Enoylreductase
ATY43_RS01240	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS01255	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS01285	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS01310	SM00855	Phosphoglycerate mutase family
ATY43_RS01315	SM00867	YceI-like domain 
ATY43_RS01320	SM00155	Phospholipase D. Active site motifs.
ATY43_RS01330	SM00563	Phosphate acyltransferases
ATY43_RS01345	SM00028	Tetratricopeptide repeats
ATY43_RS01370	SM01230	ATY43_RS01370
ATY43_RS01375	SM00938	Nitrogen regulatory protein P-II
ATY43_RS01385	SM00387	Histidine kinase-like ATPases
ATY43_RS01385	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS01390	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS01390	SM00448	cheY-homologous receiver domain
ATY43_RS01410	SM01126	ATY43_RS01410
ATY43_RS01480	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS01530	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS01555	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS01605	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS01670	SM00633	Glycosyl hydrolase family 10
ATY43_RS01675	SM00633	Glycosyl hydrolase family 10
ATY43_RS01705	SM00758	ATY43_RS01705
ATY43_RS01705	SM01217	ATY43_RS01705
ATY43_RS01715	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ATY43_RS01730	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS01815	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS01825	SM00836	DALR anticodon binding domain
ATY43_RS01870	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ATY43_RS01940	SM00878	Biotin carboxylase C-terminal domain
ATY43_RS02030	SM01126	ATY43_RS02030
ATY43_RS02120	SM00448	cheY-homologous receiver domain
ATY43_RS02120	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS02125	SM00387	Histidine kinase-like ATPases
ATY43_RS02130	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS02260	SM00563	Phosphate acyltransferases
ATY43_RS02330	SM00357	Cold shock protein domain
ATY43_RS02330	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS02330	SM00959	Rho termination factor, N-terminal domain
ATY43_RS02340	SM00487	DEAD-like helicases superfamily
ATY43_RS02340	SM00490	helicase superfamily c-terminal domain
ATY43_RS02345	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS02355	SM00448	cheY-homologous receiver domain
ATY43_RS02360	SM00986	Uracil DNA glycosylase superfamily
ATY43_RS02360	SM00987	UreE urease accessory protein, C-terminal domain 
ATY43_RS02400	SM00883	Chaperonin 10 Kd subunit
ATY43_RS02450	SM01126	ATY43_RS02450
ATY43_RS02490	SM00944	Pro-kumamolisin, activation domain
ATY43_RS02520	SM00867	YceI-like domain 
ATY43_RS02535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS02535	SM00331	Sigma factor PP2C-like phosphatases
ATY43_RS02615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS02650	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ATY43_RS02650	SM00474	3'-5' exonuclease
ATY43_RS02650	SM00475	5'-3' exonuclease
ATY43_RS02650	SM00482	DNA polymerase A domain
ATY43_RS02710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS02720	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS02805	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS02805	SM00448	cheY-homologous receiver domain
ATY43_RS02810	SM00387	Histidine kinase-like ATPases
ATY43_RS02810	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS02835	SM00450	Rhodanese Homology Domain
ATY43_RS02850	SM01126	ATY43_RS02850
ATY43_RS02860	SM01150	ATY43_RS02860
ATY43_RS02925	SM01126	ATY43_RS02925
ATY43_RS02940	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS03000	SM00400	zinc finger
ATY43_RS03000	SM00493	ATY43_RS03000
ATY43_RS03000	SM00766	DNA primase DnaG DnaB-binding
ATY43_RS03030	SM00645	Papain family cysteine protease
ATY43_RS03095	SM00357	Cold shock protein domain
ATY43_RS03225	SM00829	Enoylreductase
ATY43_RS03290	SM00487	DEAD-like helicases superfamily
ATY43_RS03290	SM00490	helicase superfamily c-terminal domain
ATY43_RS03295	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS03295	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS03295	SM00091	PAS domain
ATY43_RS03295	SM00267	diguanylate cyclase
ATY43_RS03300	SM00363	S4 RNA-binding domain
ATY43_RS03335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS03335	SM00387	Histidine kinase-like ATPases
ATY43_RS03335	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS03340	SM00448	cheY-homologous receiver domain
ATY43_RS03340	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS03370	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS03470	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS03470	SM00448	cheY-homologous receiver domain
ATY43_RS03475	SM00387	Histidine kinase-like ATPases
ATY43_RS03475	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS03485	SM00881	CoA binding domain
ATY43_RS03650	SM00904	Riboflavin kinase
ATY43_RS03695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS03825	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ATY43_RS03825	SM00534	ATPase domain of DNA mismatch repair MUTS family
ATY43_RS03855	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS03895	SM00834	Putative regulatory protein
ATY43_RS03930	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ATY43_RS03940	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS04020	SM00448	cheY-homologous receiver domain
ATY43_RS04030	SM00341	Helicase and RNase D C-terminal
ATY43_RS04030	SM00487	DEAD-like helicases superfamily
ATY43_RS04030	SM00490	helicase superfamily c-terminal domain
ATY43_RS04030	SM00956	ATY43_RS04030
ATY43_RS04040	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS04040	SM00487	DEAD-like helicases superfamily
ATY43_RS04040	SM00490	helicase superfamily c-terminal domain
ATY43_RS04040	SM00847	Helicase associated domain (HA2)  Add an annotation
ATY43_RS04095	SM00954	Region found in RelA / SpoT proteins
ATY43_RS04120	SM00491	ATY43_RS04120
ATY43_RS04145	SM00448	cheY-homologous receiver domain
ATY43_RS04150	SM00448	cheY-homologous receiver domain
ATY43_RS04155	SM00260	Two component signalling adaptor domain
ATY43_RS04160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS04165	SM00073	Histidine Phosphotransfer domain
ATY43_RS04165	SM00260	Two component signalling adaptor domain
ATY43_RS04165	SM00387	Histidine kinase-like ATPases
ATY43_RS04165	SM00448	cheY-homologous receiver domain
ATY43_RS04165	SM01231	ATY43_RS04165
ATY43_RS04200	SM00327	von Willebrand factor (vWF) type A domain
ATY43_RS04205	SM01126	ATY43_RS04205
ATY43_RS04220	SM00369	Leucine-rich repeats, typical (most populated) subfamily
ATY43_RS04265	SM01149	ATY43_RS04265
ATY43_RS04310	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS04315	SM00758	ATY43_RS04315
ATY43_RS04315	SM01217	ATY43_RS04315
ATY43_RS04335	SM00636	ATY43_RS04335
ATY43_RS04340	SM00812	Alpha-L-fucosidase
ATY43_RS04390	SM00244	prohibitin homologues
ATY43_RS04470	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS04530	SM00867	YceI-like domain 
ATY43_RS04540	SM00867	YceI-like domain 
ATY43_RS04545	SM00387	Histidine kinase-like ATPases
ATY43_RS04545	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS04545	SM00448	cheY-homologous receiver domain
ATY43_RS04550	SM00387	Histidine kinase-like ATPases
ATY43_RS04550	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS04550	SM00448	cheY-homologous receiver domain
ATY43_RS04555	SM00387	Histidine kinase-like ATPases
ATY43_RS04555	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS04555	SM00448	cheY-homologous receiver domain
ATY43_RS04575	SM00812	Alpha-L-fucosidase
ATY43_RS04600	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS04655	SM00838	Elongation factor G C-terminus
ATY43_RS04670	SM00358	Double-stranded RNA binding motif
ATY43_RS04670	SM00535	Ribonuclease III family
ATY43_RS04685	SM00448	cheY-homologous receiver domain
ATY43_RS04695	SM01118	ATY43_RS04695
ATY43_RS04750	SM00357	Cold shock protein domain
ATY43_RS04775	SM00487	DEAD-like helicases superfamily
ATY43_RS04775	SM00490	helicase superfamily c-terminal domain
ATY43_RS04805	SM00267	diguanylate cyclase
ATY43_RS04825	SM00869	Autotransporter beta-domain
ATY43_RS04830	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ATY43_RS05200	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS05220	SM00481	DNA polymerase alpha chain like domain
ATY43_RS05255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS05310	SM00972	Spore Coat Protein U domain
ATY43_RS05325	SM00972	Spore Coat Protein U domain
ATY43_RS05335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS05365	SM01172	ATY43_RS05365
ATY43_RS05370	SM00710	Parallel beta-helix repeats
ATY43_RS05370	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
ATY43_RS05405	SM00434	DNA Topoisomerase IV
ATY43_RS05410	SM00342	helix_turn_helix, arabinose operon control protein
ATY43_RS05415	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS05460	SM01126	ATY43_RS05460
ATY43_RS05485	SM00861	Transketolase, pyrimidine binding domain
ATY43_RS05490	SM00507	HNH nucleases
ATY43_RS05560	SM00271	DnaJ molecular chaperone homology domain
ATY43_RS05600	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS05625	SM00861	Transketolase, pyrimidine binding domain
ATY43_RS05635	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
ATY43_RS05645	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS05740	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS05745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATY43_RS05760	SM00984	UDP binding domain
ATY43_RS05780	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS05800	SM01018	B12 binding domain
ATY43_RS05810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ATY43_RS05855	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ATY43_RS05885	SM01126	ATY43_RS05885
ATY43_RS05940	SM01126	ATY43_RS05940
ATY43_RS06070	SM00387	Histidine kinase-like ATPases
ATY43_RS06265	SM00344	helix_turn_helix ASNC type
ATY43_RS06280	SM01323	ATY43_RS06280
ATY43_RS06335	SM00479	ATY43_RS06335
ATY43_RS06350	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS06395	SM00947	Carbonic anhydrase
ATY43_RS06405	SM00478	endonuclease III
ATY43_RS06430	SM00450	Rhodanese Homology Domain
ATY43_RS06440	SM00644	ATY43_RS06440
ATY43_RS06465	SM00981	ATY43_RS06465
ATY43_RS06500	SM00479	ATY43_RS06500
ATY43_RS06525	SM00947	Carbonic anhydrase
ATY43_RS06580	SM00968	SMC proteins Flexible Hinge Domain
ATY43_RS06585	SM00771	ZipA, C-terminal domain (FtsZ-binding)
ATY43_RS06595	SM00292	breast cancer carboxy-terminal domain
ATY43_RS06595	SM00532	Ligase N family
ATY43_RS06620	SM00434	DNA Topoisomerase IV
ATY43_RS06670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATY43_RS06670	SM00866	ATY43_RS06670
ATY43_RS06690	SM00240	Forkhead associated domain
ATY43_RS06710	SM00830	Chorismate mutase type II
ATY43_RS06735	SM00869	Autotransporter beta-domain
ATY43_RS06740	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS06740	SM00448	cheY-homologous receiver domain
ATY43_RS06745	SM00387	Histidine kinase-like ATPases
ATY43_RS06745	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS06765	SM00869	Autotransporter beta-domain
ATY43_RS06785	SM00646	ATY43_RS06785
ATY43_RS06860	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS06860	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS06860	SM00267	diguanylate cyclase
ATY43_RS06875	SM01217	ATY43_RS06875
ATY43_RS06880	SM00631	ATY43_RS06880
ATY43_RS06910	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS06955	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS07010	SM00267	diguanylate cyclase
ATY43_RS07065	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS07085	SM00646	ATY43_RS07085
ATY43_RS07210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ATY43_RS07215	SM00226	Low molecular weight phosphatase family
ATY43_RS07235	SM00450	Rhodanese Homology Domain
ATY43_RS07255	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS07255	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS07255	SM00091	PAS domain
ATY43_RS07255	SM00387	Histidine kinase-like ATPases
ATY43_RS07255	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS07255	SM00448	cheY-homologous receiver domain
ATY43_RS07260	SM00448	cheY-homologous receiver domain
ATY43_RS07320	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS07375	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS07385	SM01126	ATY43_RS07385
ATY43_RS07390	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS07405	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS07420	SM00226	Low molecular weight phosphatase family
ATY43_RS07430	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ATY43_RS07430	SM00465	GIY-YIG type nucleases (URI domain)
ATY43_RS07475	SM01126	ATY43_RS07475
ATY43_RS07595	SM01126	ATY43_RS07595
ATY43_RS07700	SM00419	helix_turn_helix, cAMP Regulatory protein
ATY43_RS07795	SM00014	Acid phosphatase homologues
ATY43_RS07805	SM00387	Histidine kinase-like ATPases
ATY43_RS07810	SM00448	cheY-homologous receiver domain
ATY43_RS07825	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS07825	SM00732	Likely ribonuclease with RNase H fold.
ATY43_RS07895	SM00479	ATY43_RS07895
ATY43_RS07905	SM00529	Helix-turn-helix diphteria tox regulatory element
ATY43_RS07915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS07980	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS07980	SM01240	ATY43_RS07980
ATY43_RS08030	SM00822	ATY43_RS08030
ATY43_RS08050	SM00411	bacterial (prokaryotic) histone like domain
ATY43_RS08055	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS08135	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS08160	SM00363	S4 RNA-binding domain
ATY43_RS08190	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08275	SM01007	Class II Aldolase and Adducin N-terminal domain
ATY43_RS08320	SM00450	Rhodanese Homology Domain
ATY43_RS08330	SM01126	ATY43_RS08330
ATY43_RS08400	SM00852	Probable molybdopterin binding domain
ATY43_RS08405	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08410	SM00564	beta-propeller repeat
ATY43_RS08425	SM00028	Tetratricopeptide repeats
ATY43_RS08435	SM00562	ATY43_RS08435
ATY43_RS08475	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08495	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08495	SM00843	ATY43_RS08495
ATY43_RS08525	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS08530	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08530	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS08555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS08570	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS08570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS08570	SM00091	PAS domain
ATY43_RS08570	SM00267	diguanylate cyclase
ATY43_RS08575	SM00091	PAS domain
ATY43_RS08575	SM00387	Histidine kinase-like ATPases
ATY43_RS08580	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS08580	SM00267	diguanylate cyclase
ATY43_RS08580	SM00448	cheY-homologous receiver domain
ATY43_RS08585	SM00387	Histidine kinase-like ATPases
ATY43_RS08600	SM00858	ATY43_RS08600
ATY43_RS08605	SM00260	Two component signalling adaptor domain
ATY43_RS08605	SM00448	cheY-homologous receiver domain
ATY43_RS08650	SM00047	Lysozyme subfamily 2
ATY43_RS08690	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS08690	SM00448	cheY-homologous receiver domain
ATY43_RS08700	SM00448	cheY-homologous receiver domain
ATY43_RS08705	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08725	SM00822	ATY43_RS08725
ATY43_RS08730	SM00822	ATY43_RS08730
ATY43_RS08785	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08840	SM00267	diguanylate cyclase
ATY43_RS08845	SM00267	diguanylate cyclase
ATY43_RS08850	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS08850	SM00267	diguanylate cyclase
ATY43_RS08865	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS08865	SM00962	SRP54-type protein, GTPase domain
ATY43_RS08880	SM00448	cheY-homologous receiver domain
ATY43_RS08890	SM00073	Histidine Phosphotransfer domain
ATY43_RS08890	SM00260	Two component signalling adaptor domain
ATY43_RS08890	SM00387	Histidine kinase-like ATPases
ATY43_RS08890	SM01231	ATY43_RS08890
ATY43_RS09020	SM01126	ATY43_RS09020
ATY43_RS09030	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS09035	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS09070	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
ATY43_RS09080	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ATY43_RS09100	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ATY43_RS09140	SM00840	ATY43_RS09140
ATY43_RS09155	SM00245	tail specific protease
ATY43_RS09170	SM01234	ATY43_RS09170
ATY43_RS09270	SM00841	Elongation factor P, C-terminal
ATY43_RS09270	SM01185	ATY43_RS09270
ATY43_RS09280	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS09280	SM00267	diguanylate cyclase
ATY43_RS09280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS09325	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS09330	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS09330	SM00487	DEAD-like helicases superfamily
ATY43_RS09330	SM00490	helicase superfamily c-terminal domain
ATY43_RS09355	SM00357	Cold shock protein domain
ATY43_RS09365	SM01322	ATY43_RS09365
ATY43_RS09380	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS09380	SM00267	diguanylate cyclase
ATY43_RS09395	SM00822	ATY43_RS09395
ATY43_RS09415	SM00853	MutL C terminal dimerisation domain
ATY43_RS09415	SM01340	ATY43_RS09415
ATY43_RS09420	SM00646	ATY43_RS09420
ATY43_RS09465	SM00474	3'-5' exonuclease
ATY43_RS09480	SM00528	Domain in histone-like proteins of HNS family
ATY43_RS09525	SM01126	ATY43_RS09525
ATY43_RS09600	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS09625	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS09625	SM01091	Transporter associated domain
ATY43_RS09660	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS09685	SM01230	ATY43_RS09685
ATY43_RS09695	SM01230	ATY43_RS09695
ATY43_RS09705	SM00267	diguanylate cyclase
ATY43_RS09705	SM00448	cheY-homologous receiver domain
ATY43_RS09760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS09760	SM00091	PAS domain
ATY43_RS09760	SM00387	Histidine kinase-like ATPases
ATY43_RS09760	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS09760	SM00448	cheY-homologous receiver domain
ATY43_RS09760	SM01079	ATY43_RS09760
ATY43_RS09765	SM00448	cheY-homologous receiver domain
ATY43_RS09765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS09800	SM01126	ATY43_RS09800
ATY43_RS09810	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS10005	SM00260	Two component signalling adaptor domain
ATY43_RS10015	SM00448	cheY-homologous receiver domain
ATY43_RS10020	SM00073	Histidine Phosphotransfer domain
ATY43_RS10020	SM00260	Two component signalling adaptor domain
ATY43_RS10020	SM00387	Histidine kinase-like ATPases
ATY43_RS10020	SM01231	ATY43_RS10020
ATY43_RS10045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10105	SM00260	Two component signalling adaptor domain
ATY43_RS10125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS10125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS10130	SM00138	Methyltransferase, chemotaxis proteins 
ATY43_RS10140	SM00448	cheY-homologous receiver domain
ATY43_RS10145	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS10145	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS10145	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS10145	SM00091	PAS domain
ATY43_RS10145	SM00267	diguanylate cyclase
ATY43_RS10170	SM00966	SpoVT / AbrB like domain 
ATY43_RS10195	SM00073	Histidine Phosphotransfer domain
ATY43_RS10195	SM00387	Histidine kinase-like ATPases
ATY43_RS10195	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS10195	SM00448	cheY-homologous receiver domain
ATY43_RS10205	SM00448	cheY-homologous receiver domain
ATY43_RS10205	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS10215	SM00937	ATY43_RS10215
ATY43_RS10220	SM00850	LytTr DNA-binding domain
ATY43_RS10275	SM00851	MGS-like domain
ATY43_RS10275	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATY43_RS10285	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
ATY43_RS10335	SM00899	ATY43_RS10335
ATY43_RS10355	SM00822	ATY43_RS10355
ATY43_RS10360	SM00841	Elongation factor P, C-terminal
ATY43_RS10360	SM01185	ATY43_RS10360
ATY43_RS10405	SM00758	ATY43_RS10405
ATY43_RS10425	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ATY43_RS10450	SM01130	ATY43_RS10450
ATY43_RS10470	SM00670	Large family of predicted nucleotide-binding domains
ATY43_RS10565	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ATY43_RS10575	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS10615	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS10625	SM01103	ATY43_RS10625
ATY43_RS10635	SM00257	Lysin motif
ATY43_RS10655	SM00463	Small MutS-related domain
ATY43_RS10685	SM01192	ATY43_RS10685
ATY43_RS10685	SM01193	ATY43_RS10685
ATY43_RS10710	SM00387	Histidine kinase-like ATPases
ATY43_RS10710	SM00433	TopoisomeraseII
ATY43_RS10745	SM01091	Transporter associated domain
ATY43_RS10780	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS10790	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS10985	SM00060	Fibronectin type 3 domain
ATY43_RS11025	SM00448	cheY-homologous receiver domain
ATY43_RS11025	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS11035	SM00387	Histidine kinase-like ATPases
ATY43_RS11065	SM00331	Sigma factor PP2C-like phosphatases
ATY43_RS11065	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
ATY43_RS11090	SM00240	Forkhead associated domain
ATY43_RS11125	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS11125	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS11270	SM00363	S4 RNA-binding domain
ATY43_RS11275	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS11290	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS11290	SM00448	cheY-homologous receiver domain
ATY43_RS11295	SM00450	Rhodanese Homology Domain
ATY43_RS11315	SM00984	UDP binding domain
ATY43_RS11355	SM01126	ATY43_RS11355
ATY43_RS11365	SM01126	ATY43_RS11365
ATY43_RS11375	SM01012	ATY43_RS11375
ATY43_RS11415	SM00852	Probable molybdopterin binding domain
ATY43_RS11435	SM01126	ATY43_RS11435
ATY43_RS11505	SM00944	Pro-kumamolisin, activation domain
ATY43_RS11570	SM01130	ATY43_RS11570
ATY43_RS11595	SM00342	helix_turn_helix, arabinose operon control protein
ATY43_RS11600	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS11600	SM00962	SRP54-type protein, GTPase domain
ATY43_RS11600	SM00963	SRP54-type protein, helical bundle domain
ATY43_RS11615	SM00478	endonuclease III
ATY43_RS11625	SM00448	cheY-homologous receiver domain
ATY43_RS11635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS11635	SM00091	PAS domain
ATY43_RS11635	SM00387	Histidine kinase-like ATPases
ATY43_RS11635	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS11830	SM00422	helix_turn_helix, mercury resistance
ATY43_RS11835	SM00411	bacterial (prokaryotic) histone like domain
ATY43_RS11840	SM00873	B3/4 domain
ATY43_RS11840	SM00874	tRNA synthetase B5 domain
ATY43_RS11840	SM00896	Ferredoxin-fold anticodon binding domain
ATY43_RS11865	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ATY43_RS11900	SM00487	DEAD-like helicases superfamily
ATY43_RS11900	SM00490	helicase superfamily c-terminal domain
ATY43_RS11990	SM01001	AIR carboxylase
ATY43_RS12010	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS12010	SM00322	K homology RNA-binding domain
ATY43_RS12015	SM01387	ATY43_RS12015
ATY43_RS12035	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS12035	SM00322	K homology RNA-binding domain
ATY43_RS12085	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ATY43_RS12090	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ATY43_RS12165	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS12165	SM00267	diguanylate cyclase
ATY43_RS12165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS12235	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ATY43_RS12270	SM00257	Lysin motif
ATY43_RS12305	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS12345	SM01160	ATY43_RS12345
ATY43_RS12355	SM01126	ATY43_RS12355
ATY43_RS12405	SM00098	Alkaline phosphatase homologues
ATY43_RS12410	SM00977	TilS substrate C-terminal domain
ATY43_RS12465	SM00316	Ribosomal protein S1-like RNA-binding domain
ATY43_RS12580	SM01126	ATY43_RS12580
ATY43_RS12635	SM01126	ATY43_RS12635
ATY43_RS12650	SM00642	Alpha-amylase domain
ATY43_RS12660	SM01126	ATY43_RS12660
ATY43_RS12665	SM01126	ATY43_RS12665
ATY43_RS12700	SM00528	Domain in histone-like proteins of HNS family
ATY43_RS12735	SM01126	ATY43_RS12735
ATY43_RS12745	SM00869	Autotransporter beta-domain
ATY43_RS12850	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ATY43_RS12870	SM01126	ATY43_RS12870
ATY43_RS12935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS12935	SM00387	Histidine kinase-like ATPases
ATY43_RS12990	SM00506	Appr-1"-p processing enzyme
ATY43_RS13050	SM01060	ATY43_RS13050
ATY43_RS13075	SM00091	PAS domain
ATY43_RS13075	SM00342	helix_turn_helix, arabinose operon control protein
ATY43_RS13135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS13140	SM00481	DNA polymerase alpha chain like domain
ATY43_RS13160	SM00966	SpoVT / AbrB like domain 
ATY43_RS13215	SM00220	Serine/Threonine protein kinases, catalytic domain
ATY43_RS13225	SM00487	DEAD-like helicases superfamily
ATY43_RS13260	SM00487	DEAD-like helicases superfamily
ATY43_RS13260	SM00490	helicase superfamily c-terminal domain
ATY43_RS13325	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS13325	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS13655	SM00478	endonuclease III
ATY43_RS13670	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS13670	SM00448	cheY-homologous receiver domain
ATY43_RS13715	SM00387	Histidine kinase-like ATPases
ATY43_RS13715	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS13720	SM00448	cheY-homologous receiver domain
ATY43_RS13720	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS13755	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS13785	SM00990	ATY43_RS13785
ATY43_RS13840	SM00662	RNA polymerases D
ATY43_RS13845	SM00363	S4 RNA-binding domain
ATY43_RS13845	SM01390	ATY43_RS13845
ATY43_RS13905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ATY43_RS13910	SM01374	ATY43_RS13910
ATY43_RS13930	SM00322	K homology RNA-binding domain
ATY43_RS13945	SM01382	ATY43_RS13945
ATY43_RS13945	SM01383	ATY43_RS13945
ATY43_RS13965	SM01403	ATY43_RS13965
ATY43_RS13980	SM00838	Elongation factor G C-terminus
ATY43_RS13980	SM00889	Elongation factor G, domain IV
ATY43_RS13995	SM00663	RNA polymerase I subunit A N-terminus
ATY43_RS14020	SM00649	Ribosomal protein L11/L12
ATY43_RS14025	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
ATY43_RS14025	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ATY43_RS14075	SM01400	ATY43_RS14075
ATY43_RS14095	SM00028	Tetratricopeptide repeats
ATY43_RS14105	SM00937	ATY43_RS14105
ATY43_RS14110	SM00028	Tetratricopeptide repeats
ATY43_RS14115	SM00852	Probable molybdopterin binding domain
ATY43_RS14245	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ATY43_RS14245	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ATY43_RS14260	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ATY43_RS14260	SM00475	5'-3' exonuclease
ATY43_RS14330	SM01126	ATY43_RS14330
ATY43_RS14365	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS14370	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS14385	SM00387	Histidine kinase-like ATPases
ATY43_RS14385	SM00448	cheY-homologous receiver domain
ATY43_RS14390	SM00448	cheY-homologous receiver domain
ATY43_RS14500	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS14545	SM01126	ATY43_RS14545
ATY43_RS14605	SM00650	Ribosomal RNA adenine dimethylases
ATY43_RS14670	SM00387	Histidine kinase-like ATPases
ATY43_RS14670	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS14675	SM00448	cheY-homologous receiver domain
ATY43_RS14675	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS14685	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS14705	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS14845	SM00996	S-adenosyl-L-homocysteine hydrolase
ATY43_RS14845	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ATY43_RS14905	SM00829	Enoylreductase
ATY43_RS14950	SM00957	SecA DEAD-like domain
ATY43_RS14950	SM00958	SecA preprotein cross-linking domain
ATY43_RS14970	SM00864	Tubulin/FtsZ family, GTPase domain
ATY43_RS14970	SM00865	Tubulin/FtsZ family, C-terminal domain
ATY43_RS14975	SM00842	Cell division protein FtsA
ATY43_RS15080	SM00448	cheY-homologous receiver domain
ATY43_RS15080	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS15085	SM00387	Histidine kinase-like ATPases
ATY43_RS15085	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS15195	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS15225	SM00829	Enoylreductase
ATY43_RS15245	SM00448	cheY-homologous receiver domain
ATY43_RS15245	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS15250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS15250	SM00387	Histidine kinase-like ATPases
ATY43_RS15250	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS15400	SM01126	ATY43_RS15400
ATY43_RS15430	SM01126	ATY43_RS15430
ATY43_RS15470	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS15480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATY43_RS15480	SM00866	ATY43_RS15480
ATY43_RS15540	SM00387	Histidine kinase-like ATPases
ATY43_RS15540	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS15540	SM00448	cheY-homologous receiver domain
ATY43_RS15545	SM00448	cheY-homologous receiver domain
ATY43_RS15550	SM00387	Histidine kinase-like ATPases
ATY43_RS15550	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS15555	SM00749	bacterial OsmY and nodulation domain
ATY43_RS15565	SM01350	ATY43_RS15565
ATY43_RS15615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS15615	SM00245	tail specific protease
ATY43_RS15620	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS15640	SM00936	Penicillin-binding protein 5, C-terminal domain 
ATY43_RS15730	SM00268	Actin
ATY43_RS15800	SM00267	diguanylate cyclase
ATY43_RS15805	SM01263	ATY43_RS15805
ATY43_RS15820	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS15820	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS15910	SM00448	cheY-homologous receiver domain
ATY43_RS15910	SM00850	LytTr DNA-binding domain
ATY43_RS15955	SM00267	diguanylate cyclase
ATY43_RS15970	SM00637	ATY43_RS15970
ATY43_RS15990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS15990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS15990	SM00091	PAS domain
ATY43_RS15990	SM00267	diguanylate cyclase
ATY43_RS16000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS16070	SM00060	Fibronectin type 3 domain
ATY43_RS16180	SM00046	Diacylglycerol kinase catalytic domain (presumed)
ATY43_RS16195	SM00271	DnaJ molecular chaperone homology domain
ATY43_RS16280	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS16310	SM00861	Transketolase, pyrimidine binding domain
ATY43_RS16315	SM01126	ATY43_RS16315
ATY43_RS16430	SM00644	ATY43_RS16430
ATY43_RS16440	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ATY43_RS16460	SM01126	ATY43_RS16460
ATY43_RS16525	SM01126	ATY43_RS16525
ATY43_RS16535	SM01126	ATY43_RS16535
ATY43_RS16555	SM01126	ATY43_RS16555
ATY43_RS16565	SM01217	ATY43_RS16565
ATY43_RS16570	SM00905	Dihydroneopterin aldolase
ATY43_RS16610	SM00645	Papain family cysteine protease
ATY43_RS16630	SM00645	Papain family cysteine protease
ATY43_RS16645	SM00387	Histidine kinase-like ATPases
ATY43_RS16645	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS16665	SM00487	DEAD-like helicases superfamily
ATY43_RS16665	SM00490	helicase superfamily c-terminal domain
ATY43_RS16665	SM00982	ATY43_RS16665
ATY43_RS16665	SM01058	CarD-like/TRCF domain
ATY43_RS16675	SM00073	Histidine Phosphotransfer domain
ATY43_RS16675	SM00260	Two component signalling adaptor domain
ATY43_RS16675	SM00387	Histidine kinase-like ATPases
ATY43_RS16675	SM01231	ATY43_RS16675
ATY43_RS16680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ATY43_RS16680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATY43_RS16685	SM00260	Two component signalling adaptor domain
ATY43_RS16690	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS16690	SM00448	cheY-homologous receiver domain
ATY43_RS16695	SM00138	Methyltransferase, chemotaxis proteins 
ATY43_RS16700	SM00448	cheY-homologous receiver domain
ATY43_RS16725	SM00855	Phosphoglycerate mutase family
ATY43_RS16860	SM01126	ATY43_RS16860
ATY43_RS16875	SM00829	Enoylreductase
ATY43_RS16880	SM00267	diguanylate cyclase
ATY43_RS16970	SM00732	Likely ribonuclease with RNase H fold.
ATY43_RS17010	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17030	SM00411	bacterial (prokaryotic) histone like domain
ATY43_RS17070	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
ATY43_RS17085	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17125	SM01126	ATY43_RS17125
ATY43_RS17190	SM00342	helix_turn_helix, arabinose operon control protein
ATY43_RS17195	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS17235	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17335	SM00855	Phosphoglycerate mutase family
ATY43_RS17410	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17410	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS17450	SM00363	S4 RNA-binding domain
ATY43_RS17505	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17505	SM00962	SRP54-type protein, GTPase domain
ATY43_RS17505	SM00963	SRP54-type protein, helical bundle domain
ATY43_RS17510	SM01126	ATY43_RS17510
ATY43_RS17525	SM00813	Alpha-L-arabinofuranosidase C-terminus
ATY43_RS17540	SM01126	ATY43_RS17540
ATY43_RS17660	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS17680	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS17730	SM00924	MgtE intracellular N domain
ATY43_RS17770	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS17795	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS17805	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
ATY43_RS17830	SM00422	helix_turn_helix, mercury resistance
ATY43_RS18130	SM00448	cheY-homologous receiver domain
ATY43_RS18130	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS18135	SM00387	Histidine kinase-like ATPases
ATY43_RS18135	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS18140	SM01126	ATY43_RS18140
ATY43_RS18155	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ATY43_RS18200	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS18215	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS18235	SM00387	Histidine kinase-like ATPases
ATY43_RS18235	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS18240	SM00448	cheY-homologous receiver domain
ATY43_RS18240	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS18300	SM00861	Transketolase, pyrimidine binding domain
ATY43_RS18325	SM00028	Tetratricopeptide repeats
ATY43_RS18325	SM00327	von Willebrand factor (vWF) type A domain
ATY43_RS18330	SM00327	von Willebrand factor (vWF) type A domain
ATY43_RS18345	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS18375	SM00965	Secretin and TonB N terminus short domain
ATY43_RS18430	SM00487	DEAD-like helicases superfamily
ATY43_RS18430	SM00490	helicase superfamily c-terminal domain
ATY43_RS18440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATY43_RS18440	SM00954	Region found in RelA / SpoT proteins
ATY43_RS18445	SM01409	ATY43_RS18445
ATY43_RS18465	SM00072	Guanylate kinase homologues.
ATY43_RS18490	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS18520	SM01011	Aminopeptidase P, N-terminal domain
ATY43_RS18615	SM00919	Malic enzyme, NAD binding domain
ATY43_RS18615	SM01274	ATY43_RS18615
ATY43_RS18635	SM00387	Histidine kinase-like ATPases
ATY43_RS18635	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS18635	SM00448	cheY-homologous receiver domain
ATY43_RS18665	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS18665	SM00448	cheY-homologous receiver domain
ATY43_RS18675	SM00387	Histidine kinase-like ATPases
ATY43_RS18675	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS18680	SM00448	cheY-homologous receiver domain
ATY43_RS18680	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS18695	SM00822	ATY43_RS18695
ATY43_RS18700	SM00354	helix_turn _helix lactose operon repressor
ATY43_RS18720	SM00642	Alpha-amylase domain
ATY43_RS18730	SM01154	ATY43_RS18730
ATY43_RS18765	SM00450	Rhodanese Homology Domain
ATY43_RS18830	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS18840	SM00460	Transglutaminase/protease-like homologues
ATY43_RS18855	SM00493	ATY43_RS18855
ATY43_RS18870	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS18905	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS18910	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS18935	SM01126	ATY43_RS18935
ATY43_RS19015	SM00331	Sigma factor PP2C-like phosphatases
ATY43_RS19015	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
ATY43_RS19025	SM00479	ATY43_RS19025
ATY43_RS19040	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS19045	SM00257	Lysin motif
ATY43_RS19070	SM00411	bacterial (prokaryotic) histone like domain
ATY43_RS19075	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS19075	SM00464	Found in ATP-dependent protease La (LON)
ATY43_RS19080	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS19080	SM00994	ClpX C4-type zinc finger
ATY43_RS19080	SM01086	C-terminal, D2-small domain, of ClpB protein
ATY43_RS19145	SM01329	ATY43_RS19145
ATY43_RS19150	SM01126	ATY43_RS19150
ATY43_RS19180	SM00448	cheY-homologous receiver domain
ATY43_RS19180	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS19185	SM00387	Histidine kinase-like ATPases
ATY43_RS19185	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS19205	SM00014	Acid phosphatase homologues
ATY43_RS19255	SM00855	Phosphoglycerate mutase family
ATY43_RS19275	SM00829	Enoylreductase
ATY43_RS19285	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS19330	SM00829	Enoylreductase
ATY43_RS19385	SM01126	ATY43_RS19385
ATY43_RS19440	SM00838	Elongation factor G C-terminus
ATY43_RS19565	SM01126	ATY43_RS19565
ATY43_RS19630	SM01126	ATY43_RS19630
ATY43_RS19640	SM01126	ATY43_RS19640
ATY43_RS19680	SM00342	helix_turn_helix, arabinose operon control protein
ATY43_RS19720	SM00917	LeuA allosteric (dimerisation) domain
ATY43_RS19725	SM01329	ATY43_RS19725
ATY43_RS19760	SM01126	ATY43_RS19760
ATY43_RS19835	SM00788	Adenylosuccinate synthetase
ATY43_RS19845	SM00244	prohibitin homologues
ATY43_RS19850	SM00244	prohibitin homologues
ATY43_RS19855	SM00448	cheY-homologous receiver domain
ATY43_RS19860	SM00271	DnaJ molecular chaperone homology domain
ATY43_RS19935	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS19970	SM00825	Beta-ketoacyl synthase
ATY43_RS19980	SM00822	ATY43_RS19980
ATY43_RS19985	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ATY43_RS20015	SM01126	ATY43_RS20015
ATY43_RS20020	SM00487	DEAD-like helicases superfamily
ATY43_RS20090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATY43_RS20090	SM00866	ATY43_RS20090
ATY43_RS20160	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS20175	SM01211	ATY43_RS20175
ATY43_RS20260	SM00656	ATY43_RS20260
ATY43_RS20320	SM00528	Domain in histone-like proteins of HNS family
ATY43_RS20335	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS20365	SM00882	Coenzyme A transferase
ATY43_RS20370	SM00882	Coenzyme A transferase
ATY43_RS20405	SM00893	Electron transfer flavoprotein domain
ATY43_RS20410	SM00893	Electron transfer flavoprotein domain
ATY43_RS20420	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS20480	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS20515	SM00487	DEAD-like helicases superfamily
ATY43_RS20515	SM00490	helicase superfamily c-terminal domain
ATY43_RS20540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS20565	SM00825	Beta-ketoacyl synthase
ATY43_RS20660	SM01126	ATY43_RS20660
ATY43_RS20685	SM00830	Chorismate mutase type II
ATY43_RS20695	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS20765	SM00986	Uracil DNA glycosylase superfamily
ATY43_RS20765	SM00987	UreE urease accessory protein, C-terminal domain 
ATY43_RS20790	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS20790	SM00930	ATY43_RS20790
ATY43_RS20870	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ATY43_RS20870	SM00091	PAS domain
ATY43_RS20870	SM00387	Histidine kinase-like ATPases
ATY43_RS20870	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS20870	SM00448	cheY-homologous receiver domain
ATY43_RS20890	SM01005	Alanine racemase, C-terminal domain
ATY43_RS20900	SM00344	helix_turn_helix ASNC type
ATY43_RS20945	SM00448	cheY-homologous receiver domain
ATY43_RS20945	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS20950	SM00387	Histidine kinase-like ATPases
ATY43_RS20950	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS20985	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS21005	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
ATY43_RS21015	SM00986	Uracil DNA glycosylase superfamily
ATY43_RS21015	SM00987	UreE urease accessory protein, C-terminal domain 
ATY43_RS21085	SM00850	LytTr DNA-binding domain
ATY43_RS21090	SM00448	cheY-homologous receiver domain
ATY43_RS21095	SM00387	Histidine kinase-like ATPases
ATY43_RS21145	SM00138	Methyltransferase, chemotaxis proteins 
ATY43_RS21150	SM00448	cheY-homologous receiver domain
ATY43_RS21160	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS21160	SM00448	cheY-homologous receiver domain
ATY43_RS21295	SM01126	ATY43_RS21295
ATY43_RS21350	SM00100	Cyclic nucleotide-monophosphate binding domain
ATY43_RS21350	SM00419	helix_turn_helix, cAMP Regulatory protein
ATY43_RS21370	SM00903	Flavin reductase like domain
ATY43_RS21615	SM00257	Lysin motif
ATY43_RS21640	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ATY43_RS21640	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ATY43_RS21640	SM00493	ATY43_RS21640
ATY43_RS21695	SM00487	DEAD-like helicases superfamily
ATY43_RS21695	SM00490	helicase superfamily c-terminal domain
ATY43_RS21710	SM01126	ATY43_RS21710
ATY43_RS21745	SM00878	Biotin carboxylase C-terminal domain
ATY43_RS21775	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS21790	SM01126	ATY43_RS21790
ATY43_RS21820	SM00912	haemagglutination activity domain
ATY43_RS21845	SM01126	ATY43_RS21845
ATY43_RS21875	SM00798	AICARFT/IMPCHase bienzyme
ATY43_RS21875	SM00851	MGS-like domain
ATY43_RS21885	SM01209	ATY43_RS21885
ATY43_RS21885	SM01210	ATY43_RS21885
ATY43_RS21915	SM00563	Phosphate acyltransferases
ATY43_RS21975	SM00052	Putative diguanylate phosphodiesterase
ATY43_RS21975	SM00267	diguanylate cyclase
ATY43_RS21975	SM00448	cheY-homologous receiver domain
ATY43_RS21980	SM00073	Histidine Phosphotransfer domain
ATY43_RS21980	SM00387	Histidine kinase-like ATPases
ATY43_RS21980	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS21980	SM00448	cheY-homologous receiver domain
ATY43_RS22065	SM00470	ParB-like nuclease domain
ATY43_RS22085	SM01259	ATY43_RS22085
ATY43_RS22115	SM00836	DALR anticodon binding domain
ATY43_RS22115	SM01016	Arginyl tRNA synthetase N terminal dom
ATY43_RS22140	SM00090	RIO-like kinase
ATY43_RS22165	SM00998	Adenylosuccinate lyase C-terminus
ATY43_RS22240	SM00881	CoA binding domain
ATY43_RS22250	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATY43_RS22250	SM00924	MgtE intracellular N domain
ATY43_RS22275	SM00226	Low molecular weight phosphatase family
ATY43_RS22280	SM00248	ankyrin repeats
ATY43_RS22290	SM00825	Beta-ketoacyl synthase
ATY43_RS22315	SM00822	ATY43_RS22315
ATY43_RS22330	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS22330	SM00876	Biotin and Thiamin Synthesis associated domain
ATY43_RS22375	SM01060	ATY43_RS22375
ATY43_RS22425	SM00849	Metallo-beta-lactamase superfamily
ATY43_RS22515	SM00387	Histidine kinase-like ATPases
ATY43_RS22515	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS22520	SM00448	cheY-homologous receiver domain
ATY43_RS22520	SM00862	Transcriptional regulatory protein, C terminal
ATY43_RS22545	SM00248	ankyrin repeats
ATY43_RS22550	SM01060	ATY43_RS22550
ATY43_RS22565	SM01126	ATY43_RS22565
ATY43_RS22580	SM00491	ATY43_RS22580
ATY43_RS22610	SM00477	DNA/RNA non-specific endonuclease
ATY43_RS22610	SM00892	DNA/RNA non-specific endonuclease
ATY43_RS22630	SM01004	Delta-aminolevulinic acid dehydratase
ATY43_RS22675	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
ATY43_RS22695	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS22705	SM00530	Helix-turn-helix XRE-family like proteins 
ATY43_RS22730	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS22865	SM00563	Phosphate acyltransferases
ATY43_RS22885	SM01321	ATY43_RS22885
ATY43_RS22890	SM01126	ATY43_RS22890
ATY43_RS22910	SM00346	helix_turn_helix isocitrate lyase regulation
ATY43_RS22930	SM00091	PAS domain
ATY43_RS22930	SM00387	Histidine kinase-like ATPases
ATY43_RS22930	SM00388	His Kinase A (phosphoacceptor) domain
ATY43_RS22930	SM00448	cheY-homologous receiver domain
ATY43_RS22960	SM00564	beta-propeller repeat
ATY43_RS23015	SM01126	ATY43_RS23015
ATY43_RS23040	SM01126	ATY43_RS23040
ATY43_RS23055	SM00382	ATPases associated with a variety of cellular activities
ATY43_RS23105	SM01126	ATY43_RS23105
ATY43_RS23110	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ATY43_RS23110	SM01232	ATY43_RS23110
ATY43_RS23165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ATY43_RS23165	SM00091	PAS domain
ATY43_RS23225	SM00829	Enoylreductase
ATY43_RS23295	SM00344	helix_turn_helix ASNC type
ATY43_RS23345	SM00829	Enoylreductase
ATY43_RS23375	SM00487	DEAD-like helicases superfamily
ATY43_RS23375	SM00490	helicase superfamily c-terminal domain
ATY43_RS23375	SM00847	Helicase associated domain (HA2)  Add an annotation
ATY43_RS23385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ATY43_RS23440	SM00421	helix_turn_helix, Lux Regulon
ATY43_RS23440	SM00448	cheY-homologous receiver domain
ATY43_RS23550	SM00155	Phospholipase D. Active site motifs.
ATY43_RS23575	SM01126	ATY43_RS23575
ATY43_RS23615	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATY43_RS23650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATY43_RS23650	SM00245	tail specific protease
ATY43_RS23725	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATY43_RS23845	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ATY43_RS23870	SM00014	Acid phosphatase homologues
ATY43_RS23880	SM00028	Tetratricopeptide repeats
