locus-tag	class	description
ATY47_RS00005	PF00308	Bacterial dnaA  protein
ATY47_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
ATY47_RS00005	PF11638	DnaA N-terminal domain
ATY47_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
ATY47_RS00010	PF02767	DNA polymerase III beta subunit, central domain
ATY47_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
ATY47_RS00015	PF02463	RecF/RecN/SMC N terminal domain
ATY47_RS00020	PF00204	DNA gyrase B
ATY47_RS00020	PF00986	DNA gyrase B subunit, carboxyl terminus
ATY47_RS00020	PF18053	DNA gyrase B subunit insert domain
ATY47_RS00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS00020	PF01751	Toprim domain
ATY47_RS00030	PF01435	Peptidase family M48
ATY47_RS00045	PF01618	MotA/TolQ/ExbB proton channel family
ATY47_RS00050	PF02472	Biopolymer transport protein ExbD/TolR
ATY47_RS00055	PF02472	Biopolymer transport protein ExbD/TolR
ATY47_RS00060	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
ATY47_RS00070	PF13091	PLD-like domain
ATY47_RS00070	PF13396	Phospholipase_D-nuclease N-terminal
ATY47_RS00080	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
ATY47_RS00085	PF00155	Aminotransferase class I and II
ATY47_RS00090	PF00593	TonB dependent receptor
ATY47_RS00090	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS00105	PF05598	Transposase domain (DUF772)
ATY47_RS00105	PF01609	Transposase DDE domain
ATY47_RS00110	PF01070	FMN-dependent dehydrogenase
ATY47_RS00115	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
ATY47_RS00130	PF07055	Enoyl reductase FAD binding domain
ATY47_RS00130	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
ATY47_RS00130	PF12241	Trans-2-enoyl-CoA reductase catalytic region
ATY47_RS00135	PF00294	pfkB family carbohydrate kinase
ATY47_RS00150	PF01609	Transposase DDE domain
ATY47_RS00150	PF05598	Transposase domain (DUF772)
ATY47_RS00155	PF00005	ABC transporter
ATY47_RS00165	PF05598	Transposase domain (DUF772)
ATY47_RS00175	PF00364	Biotin-requiring enzyme
ATY47_RS00175	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
ATY47_RS00195	PF01609	Transposase DDE domain
ATY47_RS00195	PF05598	Transposase domain (DUF772)
ATY47_RS00205	PF00271	Helicase conserved C-terminal domain
ATY47_RS00205	PF00270	DEAD/DEAH box helicase
ATY47_RS00215	PF06903	VirK protein
ATY47_RS00240	PF01609	Transposase DDE domain
ATY47_RS00240	PF05598	Transposase domain (DUF772)
ATY47_RS00290	PF03150	Di-haem cytochrome c peroxidase
ATY47_RS00300	PF13460	NAD(P)H-binding 
ATY47_RS00305	PF00128	Alpha amylase, catalytic domain
ATY47_RS00305	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ATY47_RS00315	PF00128	Alpha amylase, catalytic domain
ATY47_RS00320	PF02446	4-alpha-glucanotransferase
ATY47_RS00325	PF00128	Alpha amylase, catalytic domain
ATY47_RS00325	PF11941	Domain of unknown function (DUF3459)
ATY47_RS00325	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ATY47_RS00330	PF00128	Alpha amylase, catalytic domain
ATY47_RS00330	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ATY47_RS00330	PF02806	Alpha amylase, C-terminal all-beta domain
ATY47_RS00335	PF00534	Glycosyl transferases group 1
ATY47_RS00335	PF08323	Starch synthase catalytic domain
ATY47_RS00340	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS00345	PF02638	Glycosyl hydrolase-like 10
ATY47_RS00350	PF05661	Protein of unknown function (DUF808)
ATY47_RS00355	PF03109	ABC1 family
ATY47_RS00365	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS00375	PF12795	Mechanosensitive ion channel porin domain
ATY47_RS00375	PF12794	Mechanosensitive ion channel inner membrane domain 1
ATY47_RS00375	PF00924	Mechanosensitive ion channel
ATY47_RS00400	PF01464	Transglycosylase SLT domain
ATY47_RS00410	PF03958	Bacterial type II/III secretion system short domain
ATY47_RS00410	PF00263	Bacterial type II and III secretion system protein
ATY47_RS00415	PF01311	Bacterial export proteins, family 1
ATY47_RS00425	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATY47_RS00425	PF02874	ATP synthase alpha/beta family, beta-barrel domain
ATY47_RS00425	PF18269	T3SS EscN ATPase C-terminal domain
ATY47_RS00440	PF01514	Secretory protein of YscJ/FliF family
ATY47_RS00455	PF01312	FlhB HrpN YscU SpaS Family
ATY47_RS00460	PF00771	FHIPEP family
ATY47_RS00475	PF00813	FliP family
ATY47_RS00480	PF01313	Bacterial export proteins, family 3
ATY47_RS00530	PF05819	NolX protein
ATY47_RS00560	PF00595	PDZ domain
ATY47_RS00570	PF08521	Two-component sensor kinase N-terminal
ATY47_RS00570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS00570	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS00575	PF08338	Domain of unknown function (DUF1731)
ATY47_RS00575	PF01370	NAD dependent epimerase/dehydratase family
ATY47_RS00585	PF01609	Transposase DDE domain
ATY47_RS00585	PF05598	Transposase domain (DUF772)
ATY47_RS00610	PF00665	Integrase core domain
ATY47_RS00610	PF13936	Helix-turn-helix domain
ATY47_RS00625	PF00293	NUDIX domain
ATY47_RS00625	PF13344	Haloacid dehalogenase-like hydrolase
ATY47_RS00655	PF13533	Biotin-lipoyl like
ATY47_RS00660	PF00005	ABC transporter
ATY47_RS00675	PF00665	Integrase core domain
ATY47_RS00675	PF13936	Helix-turn-helix domain
ATY47_RS00685	PF08845	Toxin SymE, type I toxin-antitoxin system
ATY47_RS00700	PF03006	Haemolysin-III related
ATY47_RS00705	PF00270	DEAD/DEAH box helicase
ATY47_RS00705	PF09369	Domain of unknown function (DUF1998)
ATY47_RS00705	PF00271	Helicase conserved C-terminal domain
ATY47_RS00760	PF00310	Glutamine amidotransferases class-II
ATY47_RS00760	PF04898	Glutamate synthase central domain
ATY47_RS00760	PF01645	Conserved region in glutamate synthase
ATY47_RS00760	PF01493	GXGXG motif
ATY47_RS00765	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS00765	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
ATY47_RS00785	PF00665	Integrase core domain
ATY47_RS00785	PF13936	Helix-turn-helix domain
ATY47_RS00820	PF05598	Transposase domain (DUF772)
ATY47_RS00825	PF04962	KduI/IolB family
ATY47_RS00830	PF04962	KduI/IolB family
ATY47_RS00835	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS00855	PF00128	Alpha amylase, catalytic domain
ATY47_RS00855	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ATY47_RS00855	PF02806	Alpha amylase, C-terminal all-beta domain
ATY47_RS00860	PF16657	Maltogenic Amylase, C-terminal domain
ATY47_RS00860	PF00128	Alpha amylase, catalytic domain
ATY47_RS00865	PF11896	Domain of unknown function (DUF3416)
ATY47_RS00865	PF00128	Alpha amylase, catalytic domain
ATY47_RS00870	PF13683	Integrase core domain
ATY47_RS00870	PF13276	HTH-like domain
ATY47_RS00885	PF00872	Transposase, Mutator family
ATY47_RS00900	PF05598	Transposase domain (DUF772)
ATY47_RS00915	PF01078	Magnesium chelatase, subunit ChlI
ATY47_RS00915	PF13335	Magnesium chelatase, subunit ChlI C-terminal
ATY47_RS00920	PF04380	Membrane fusogenic activity
ATY47_RS00925	PF00543	Nitrogen regulatory protein P-II
ATY47_RS00950	PF17284	Spermidine synthase tetramerisation domain
ATY47_RS00955	PF17944	Arginine decarboxylase C-terminal helical extension
ATY47_RS00955	PF17810	Arginine decarboxylase helical bundle domain
ATY47_RS00955	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
ATY47_RS00960	PF05598	Transposase domain (DUF772)
ATY47_RS01010	PF01134	Glucose inhibited division protein A
ATY47_RS01010	PF13932	GidA associated domain
ATY47_RS01020	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS01040	PF13649	Methyltransferase domain
ATY47_RS01050	PF12697	Alpha/beta hydrolase family
ATY47_RS01060	PF13276	HTH-like domain
ATY47_RS01060	PF13683	Integrase core domain
ATY47_RS01070	PF04349	Periplasmic glucan biosynthesis protein, MdoG
ATY47_RS01080	PF00265	Thymidine kinase
ATY47_RS01085	PF13361	UvrD-like helicase C-terminal domain
ATY47_RS01085	PF00580	UvrD/REP helicase N-terminal domain
ATY47_RS01100	PF04337	Protein of unknown function, DUF480
ATY47_RS01105	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
ATY47_RS01110	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
ATY47_RS01115	PF04820	Tryptophan halogenase
ATY47_RS01130	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS01140	PF01553	Acyltransferase
ATY47_RS01160	PF01527	Transposase
ATY47_RS01175	PF00657	GDSL-like Lipase/Acylhydrolase
ATY47_RS01185	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
ATY47_RS01190	PF01037	Lrp/AsnC ligand binding domain
ATY47_RS01200	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS01200	PF00593	TonB dependent receptor
ATY47_RS01200	PF07660	Secretin and TonB N terminus short domain
ATY47_RS01205	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS01205	PF00593	TonB dependent receptor
ATY47_RS01210	PF13936	Helix-turn-helix domain
ATY47_RS01210	PF00665	Integrase core domain
ATY47_RS01215	PF05598	Transposase domain (DUF772)
ATY47_RS01245	PF00107	Zinc-binding dehydrogenase
ATY47_RS01245	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS01250	PF00150	Cellulase (glycosyl hydrolase family 5)
ATY47_RS01255	PF00150	Cellulase (glycosyl hydrolase family 5)
ATY47_RS01265	PF00150	Cellulase (glycosyl hydrolase family 5)
ATY47_RS01270	PF13936	Helix-turn-helix domain
ATY47_RS01270	PF00665	Integrase core domain
ATY47_RS01280	PF02810	SEC-C motif
ATY47_RS01295	PF05598	Transposase domain (DUF772)
ATY47_RS01295	PF01609	Transposase DDE domain
ATY47_RS01300	PF01263	Aldose 1-epimerase
ATY47_RS01305	PF07690	Major Facilitator Superfamily
ATY47_RS01310	PF01126	Heme oxygenase
ATY47_RS01315	PF01590	GAF domain
ATY47_RS01315	PF00360	Phytochrome region
ATY47_RS01315	PF13426	PAS domain
ATY47_RS01315	PF08446	PAS fold
ATY47_RS01320	PF03594	Benzoate membrane transport protein
ATY47_RS01325	PF03594	Benzoate membrane transport protein
ATY47_RS01360	PF01527	Transposase
ATY47_RS01370	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
ATY47_RS01370	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
ATY47_RS01370	PF06827	Zinc finger found in FPG and IleRS
ATY47_RS01380	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS01390	PF05598	Transposase domain (DUF772)
ATY47_RS01400	PF04333	MlaA lipoprotein
ATY47_RS01410	PF05494	MlaC protein
ATY47_RS01415	PF02470	MlaD protein
ATY47_RS01420	PF02405	Permease MlaE
ATY47_RS01425	PF00005	ABC transporter
ATY47_RS01455	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS01485	PF13683	Integrase core domain
ATY47_RS01485	PF13276	HTH-like domain
ATY47_RS01490	PF01527	Transposase
ATY47_RS01510	PF01011	PQQ enzyme repeat
ATY47_RS01510	PF13570	PQQ-like domain
ATY47_RS01510	PF13360	PQQ-like domain
ATY47_RS01515	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS01535	PF17167	Glycosyl hydrolase 36 superfamily, catalytic domain
ATY47_RS01535	PF06165	Glycosyltransferase family 36
ATY47_RS01550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS01550	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS01555	PF02659	Putative manganese efflux pump
ATY47_RS01560	PF09339	IclR helix-turn-helix domain
ATY47_RS01560	PF01614	Bacterial transcriptional regulator
ATY47_RS01565	PF07690	Major Facilitator Superfamily
ATY47_RS01570	PF05336	L-rhamnose mutarotase
ATY47_RS01595	PF01432	Peptidase family M3
ATY47_RS01610	PF00472	RF-1 domain
ATY47_RS01620	PF00849	RNA pseudouridylate synthase
ATY47_RS01630	PF03109	ABC1 family
ATY47_RS01645	PF07478	D-ala D-ala ligase C-terminus
ATY47_RS01645	PF01820	D-ala D-ala ligase N-terminus
ATY47_RS01655	PF05598	Transposase domain (DUF772)
ATY47_RS01680	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS01685	PF01527	Transposase
ATY47_RS01730	PF08546	Ketopantoate reductase PanE/ApbA C terminal
ATY47_RS01730	PF02558	Ketopantoate reductase PanE/ApbA
ATY47_RS01740	PF01061	ABC-2 type transporter
ATY47_RS01745	PF00005	ABC transporter
ATY47_RS01750	PF00175	Oxidoreductase NAD-binding domain 
ATY47_RS01750	PF01383	CpcD/allophycocyanin linker domain
ATY47_RS01755	PF01545	Cation efflux family
ATY47_RS01760	PF02583	Metal-sensitive transcriptional repressor
ATY47_RS01770	PF01381	Helix-turn-helix
ATY47_RS01780	PF00005	ABC transporter
ATY47_RS01795	PF04820	Tryptophan halogenase
ATY47_RS01815	PF02798	Glutathione S-transferase, N-terminal domain
ATY47_RS01815	PF00043	Glutathione S-transferase, C-terminal domain
ATY47_RS01820	PF00326	Prolyl oligopeptidase family
ATY47_RS01820	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
ATY47_RS01845	PF00490	Delta-aminolevulinic acid dehydratase
ATY47_RS01860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS01860	PF03466	LysR substrate binding domain
ATY47_RS01870	PF00175	Oxidoreductase NAD-binding domain 
ATY47_RS01870	PF00258	Flavodoxin
ATY47_RS01870	PF00667	FAD binding domain
ATY47_RS01885	PF08501	Shikimate dehydrogenase substrate binding domain
ATY47_RS01885	PF01488	Shikimate / quinate 5-dehydrogenase
ATY47_RS01885	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
ATY47_RS01895	PF13307	Helicase C-terminal domain
ATY47_RS01895	PF06733	DEAD_2
ATY47_RS01915	PF13533	Biotin-lipoyl like
ATY47_RS01920	PF06628	Catalase-related immune-responsive
ATY47_RS01920	PF00199	Catalase
ATY47_RS01940	PF01207	Dihydrouridine synthase (Dus)
ATY47_RS01950	PF00072	Response regulator receiver domain
ATY47_RS01950	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS01955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS01980	PF02237	Biotin protein ligase C terminal domain
ATY47_RS01980	PF08279	HTH domain
ATY47_RS01980	PF03099	Biotin/lipoate A/B protein ligase family
ATY47_RS01985	PF03309	Type III pantothenate kinase
ATY47_RS02000	PF02223	Thymidylate kinase
ATY47_RS02020	PF00491	Arginase family
ATY47_RS02035	PF05532	CsbD-like
ATY47_RS02040	PF00579	tRNA synthetases class I (W and Y)
ATY47_RS02045	PF00753	Metallo-beta-lactamase superfamily
ATY47_RS02075	PF00892	EamA-like transporter family
ATY47_RS02095	PF00199	Catalase
ATY47_RS02100	PF04542	Sigma-70 region 2 
ATY47_RS02100	PF08281	Sigma-70, region 4
ATY47_RS02110	PF00883	Cytosol aminopeptidase family, catalytic domain
ATY47_RS02110	PF02789	Cytosol aminopeptidase family, N-terminal domain
ATY47_RS02120	PF01594	AI-2E family transporter
ATY47_RS02130	PF01040	UbiA prenyltransferase family
ATY47_RS02140	PF04055	Radical SAM superfamily
ATY47_RS02140	PF06968	Biotin and Thiamin Synthesis associated domain
ATY47_RS02145	PF00155	Aminotransferase class I and II
ATY47_RS02170	PF00535	Glycosyl transferase family 2
ATY47_RS02180	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATY47_RS02180	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATY47_RS02185	PF05166	YcgL domain
ATY47_RS02200	PF00723	Glycosyl hydrolases family 15
ATY47_RS02205	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
ATY47_RS02205	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
ATY47_RS02215	PF02254	TrkA-N domain
ATY47_RS02215	PF00999	Sodium/hydrogen exchanger family
ATY47_RS02220	PF00571	CBS domain
ATY47_RS02220	PF01769	Divalent cation transporter
ATY47_RS02220	PF03448	MgtE intracellular N domain
ATY47_RS02230	PF00583	Acetyltransferase (GNAT) family
ATY47_RS02230	PF13380	CoA binding domain
ATY47_RS02230	PF13607	Succinyl-CoA ligase like flavodoxin domain
ATY47_RS02240	PF03477	ATP cone domain
ATY47_RS02240	PF00317	Ribonucleotide reductase, all-alpha domain
ATY47_RS02240	PF02867	Ribonucleotide reductase, barrel domain
ATY47_RS02245	PF00268	Ribonucleotide reductase, small chain
ATY47_RS02265	PF01527	Transposase
ATY47_RS02275	PF01144	Coenzyme A transferase
ATY47_RS02280	PF00108	Thiolase, N-terminal domain
ATY47_RS02280	PF02803	Thiolase, C-terminal domain
ATY47_RS02285	PF00775	Dioxygenase
ATY47_RS02285	PF12391	Protocatechuate 3,4-dioxygenase beta subunit N terminal
ATY47_RS02300	PF00206	Lyase
ATY47_RS02300	PF10397	Adenylosuccinate lyase C-terminus
ATY47_RS02305	PF12146	Serine aminopeptidase, S33
ATY47_RS02310	PF02627	Carboxymuconolactone decarboxylase family
ATY47_RS02320	PF09339	IclR helix-turn-helix domain
ATY47_RS02320	PF01614	Bacterial transcriptional regulator
ATY47_RS02330	PF13936	Helix-turn-helix domain
ATY47_RS02330	PF00665	Integrase core domain
ATY47_RS02335	PF00106	short chain dehydrogenase
ATY47_RS02350	PF03485	Arginyl tRNA synthetase N terminal domain
ATY47_RS02350	PF05746	DALR anticodon binding domain
ATY47_RS02350	PF00750	tRNA synthetases class I (R)
ATY47_RS02355	PF04002	RadC-like JAB domain
ATY47_RS02360	PF02441	Flavoprotein
ATY47_RS02360	PF04127	DNA / pantothenate metabolism flavoprotein
ATY47_RS02365	PF00692	dUTPase
ATY47_RS02370	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
ATY47_RS02370	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
ATY47_RS02370	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ATY47_RS02370	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
ATY47_RS02385	PF00535	Glycosyl transferase family 2
ATY47_RS02390	PF01370	NAD dependent epimerase/dehydratase family
ATY47_RS02400	PF02195	ParB-like nuclease domain
ATY47_RS02400	PF17762	HTH domain found in ParB protein
ATY47_RS02405	PF13614	AAA domain
ATY47_RS02415	PF00156	Phosphoribosyl transferase domain
ATY47_RS02420	PF03372	Endonuclease/Exonuclease/phosphatase family
ATY47_RS02425	PF07690	Major Facilitator Superfamily
ATY47_RS02435	PF03702	Anhydro-N-acetylmuramic acid kinase
ATY47_RS02440	PF04225	Opacity-associated protein A LysM-like domain
ATY47_RS02440	PF01551	Peptidase family M23
ATY47_RS02445	PF00579	tRNA synthetases class I (W and Y)
ATY47_RS02480	PF01527	Transposase
ATY47_RS02485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS02485	PF00672	HAMP domain
ATY47_RS02485	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS02485	PF01627	Hpt domain
ATY47_RS02485	PF00072	Response regulator receiver domain
ATY47_RS02485	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
ATY47_RS02490	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS02490	PF00072	Response regulator receiver domain
ATY47_RS02515	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS02525	PF01521	Iron-sulphur cluster biosynthesis
ATY47_RS02535	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
ATY47_RS02535	PF09297	NADH pyrophosphatase zinc ribbon domain
ATY47_RS02535	PF00293	NUDIX domain
ATY47_RS02540	PF17113	Regulatory signalling modulator protein AmpE
ATY47_RS02540	PF03186	CobD/Cbib protein
ATY47_RS02560	PF07690	Major Facilitator Superfamily
ATY47_RS02575	PF12805	FUSC-like inner membrane protein yccS
ATY47_RS02585	PF02687	FtsX-like permease family
ATY47_RS02585	PF12704	MacB-like periplasmic core domain
ATY47_RS02585	PF00005	ABC transporter
ATY47_RS02590	PF02843	Phosphoribosylglycinamide synthetase, C domain
ATY47_RS02590	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATY47_RS02590	PF02844	Phosphoribosylglycinamide synthetase, N domain
ATY47_RS02600	PF01808	AICARFT/IMPCHase bienzyme
ATY47_RS02600	PF02142	MGS-like domain
ATY47_RS02605	PF01066	CDP-alcohol phosphatidyltransferase
ATY47_RS02610	PF12147	Putative methyltransferase
ATY47_RS02610	PF12146	Serine aminopeptidase, S33
ATY47_RS02620	PF12147	Putative methyltransferase
ATY47_RS02620	PF12146	Serine aminopeptidase, S33
ATY47_RS02625	PF00782	Dual specificity phosphatase, catalytic domain
ATY47_RS02635	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS02645	PF01381	Helix-turn-helix
ATY47_RS02675	PF02785	Biotin carboxylase C-terminal domain
ATY47_RS02675	PF00289	Biotin carboxylase, N-terminal domain
ATY47_RS02675	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATY47_RS02685	PF00364	Biotin-requiring enzyme
ATY47_RS02690	PF01220	Dehydroquinase class II
ATY47_RS02700	PF02683	Cytochrome C biogenesis protein transmembrane region
ATY47_RS02700	PF11412	Disulphide bond corrector protein DsbC
ATY47_RS02705	PF03091	CutA1 divalent ion tolerance protein
ATY47_RS02730	PF00271	Helicase conserved C-terminal domain
ATY47_RS02730	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
ATY47_RS02730	PF18074	Primosomal protein N C-terminal domain
ATY47_RS02730	PF17764	3′ DNA-binding domain (3′BD)
ATY47_RS02730	PF00270	DEAD/DEAH box helicase
ATY47_RS02755	PF01554	MatE
ATY47_RS02760	PF01343	Peptidase family S49
ATY47_RS02785	PF01300	Telomere recombination
ATY47_RS02790	PF13368	Topoisomerase C-terminal repeat
ATY47_RS02790	PF01751	Toprim domain
ATY47_RS02790	PF01131	DNA topoisomerase
ATY47_RS02800	PF00114	Pilin (bacterial filament)
ATY47_RS02800	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS02805	PF04361	Protein of unknown function (DUF494)
ATY47_RS02810	PF02481	DNA recombination-mediator protein A
ATY47_RS02810	PF17782	DprA winged helix domain
ATY47_RS02815	PF01476	LysM domain
ATY47_RS02820	PF01327	Polypeptide deformylase
ATY47_RS02825	PF02911	Formyl transferase, C-terminal domain
ATY47_RS02825	PF00551	Formyl transferase
ATY47_RS02830	PF01189	16S rRNA methyltransferase RsmB/F
ATY47_RS02830	PF01029	NusB family
ATY47_RS02845	PF00535	Glycosyl transferase family 2
ATY47_RS02865	PF00925	GTP cyclohydrolase II
ATY47_RS02880	PF03279	Bacterial lipid A biosynthesis acyltransferase
ATY47_RS02885	PF02580	D-Tyr-tRNA(Tyr) deacylase
ATY47_RS02890	PF00140	Sigma-70 factor, region 1.2
ATY47_RS02890	PF04542	Sigma-70 region 2 
ATY47_RS02890	PF04539	Sigma-70 region 3
ATY47_RS02890	PF04546	Sigma-70, non-essential region
ATY47_RS02890	PF04545	Sigma-70, region 4
ATY47_RS02890	PF03979	Sigma-70 factor, region 1.1
ATY47_RS02910	PF00589	Phage integrase family
ATY47_RS02930	PF07996	Type IV secretion system proteins
ATY47_RS02945	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
ATY47_RS02960	PF00145	C-5 cytosine-specific DNA methylase
ATY47_RS03035	PF00005	ABC transporter
ATY47_RS03050	PF00593	TonB dependent receptor
ATY47_RS03050	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS03090	PF13823	Alcohol dehydrogenase GroES-associated
ATY47_RS03090	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS03090	PF00107	Zinc-binding dehydrogenase
ATY47_RS03100	PF02322	Cytochrome bd terminal oxidase subunit II
ATY47_RS03105	PF01654	Cytochrome bd terminal oxidase subunit I
ATY47_RS03110	PF00158	Sigma-54 interaction domain
ATY47_RS03110	PF00072	Response regulator receiver domain
ATY47_RS03110	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS03125	PF08448	PAS fold
ATY47_RS03125	PF03705	CheR methyltransferase, all-alpha domain
ATY47_RS03125	PF01339	CheB methylesterase
ATY47_RS03125	PF01739	CheR methyltransferase, SAM binding domain
ATY47_RS03145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS03145	PF02743	Cache domain
ATY47_RS03145	PF00672	HAMP domain
ATY47_RS03145	PF06580	Histidine kinase
ATY47_RS03150	PF04397	LytTr DNA-binding domain
ATY47_RS03150	PF00072	Response regulator receiver domain
ATY47_RS03155	PF00072	Response regulator receiver domain
ATY47_RS03155	PF04397	LytTr DNA-binding domain
ATY47_RS03165	PF13520	Amino acid permease
ATY47_RS03185	PF05649	Peptidase family M13
ATY47_RS03185	PF01431	Peptidase family M13
ATY47_RS03200	PF00248	Aldo/keto reductase family
ATY47_RS03205	PF03358	NADPH-dependent FMN reductase
ATY47_RS03215	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
ATY47_RS03225	PF03167	Uracil DNA glycosylase superfamily
ATY47_RS03235	PF02469	Fasciclin domain
ATY47_RS03250	PF00999	Sodium/hydrogen exchanger family
ATY47_RS03255	PF00005	ABC transporter
ATY47_RS03260	PF01061	ABC-2 type transporter
ATY47_RS03280	PF04151	Bacterial pre-peptidase C-terminal domain
ATY47_RS03280	PF00082	Subtilase family
ATY47_RS03290	PF13188	PAS domain
ATY47_RS03290	PF00072	Response regulator receiver domain
ATY47_RS03290	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS03290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS03290	PF08448	PAS fold
ATY47_RS03295	PF00072	Response regulator receiver domain
ATY47_RS03295	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS03315	PF00691	OmpA family
ATY47_RS03315	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
ATY47_RS03320	PF01618	MotA/TolQ/ExbB proton channel family
ATY47_RS03330	PF01641	SelR domain
ATY47_RS03340	PF01037	Lrp/AsnC ligand binding domain
ATY47_RS03345	PF01266	FAD dependent oxidoreductase
ATY47_RS03350	PF01168	Alanine racemase, N-terminal domain
ATY47_RS03350	PF00842	Alanine racemase, C-terminal domain
ATY47_RS03370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS03370	PF00989	PAS fold
ATY47_RS03370	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS03385	PF07995	Glucose / Sorbosone dehydrogenase
ATY47_RS03405	PF05175	Methyltransferase small domain
ATY47_RS03405	PF08468	Methyltransferase small domain N-terminal
ATY47_RS03410	PF01479	S4 domain
ATY47_RS03410	PF00849	RNA pseudouridylate synthase
ATY47_RS03415	PF13419	Haloacid dehalogenase-like hydrolase
ATY47_RS03445	PF04461	Protein of unknown function (DUF520)
ATY47_RS03450	PF00892	EamA-like transporter family
ATY47_RS03455	PF00005	ABC transporter
ATY47_RS03455	PF09383	NIL domain
ATY47_RS03460	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS03465	PF03180	NLPA lipoprotein
ATY47_RS03490	PF00364	Biotin-requiring enzyme
ATY47_RS03490	PF02817	e3 binding domain
ATY47_RS03490	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
ATY47_RS03500	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
ATY47_RS03500	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS03520	PF00119	ATP synthase A chain
ATY47_RS03525	PF00137	ATP synthase subunit C
ATY47_RS03530	PF00430	ATP synthase B/B' CF(0)
ATY47_RS03535	PF00213	ATP synthase delta (OSCP) subunit
ATY47_RS03540	PF00306	ATP synthase alpha/beta chain, C terminal domain
ATY47_RS03540	PF02874	ATP synthase alpha/beta family, beta-barrel domain
ATY47_RS03540	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATY47_RS03545	PF00231	ATP synthase
ATY47_RS03550	PF02874	ATP synthase alpha/beta family, beta-barrel domain
ATY47_RS03550	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATY47_RS03555	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATY47_RS03560	PF01817	Chorismate mutase type II
ATY47_RS03570	PF12804	MobA-like NTP transferase domain
ATY47_RS03570	PF14602	Hexapeptide repeat of succinyl-transferase
ATY47_RS03570	PF00132	Bacterial transferase hexapeptide (six repeats)
ATY47_RS03575	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS03575	PF00072	Response regulator receiver domain
ATY47_RS03575	PF13426	PAS domain
ATY47_RS03575	PF08448	PAS fold
ATY47_RS03575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS03605	PF00005	ABC transporter
ATY47_RS03605	PF08402	TOBE domain
ATY47_RS03610	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS03615	PF01380	SIS domain
ATY47_RS03630	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS03650	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ATY47_RS03655	PF05275	Copper resistance protein B precursor (CopB)
ATY47_RS03660	PF00394	Multicopper oxidase
ATY47_RS03660	PF07732	Multicopper oxidase
ATY47_RS03660	PF07731	Multicopper oxidase
ATY47_RS03675	PF01432	Peptidase family M3
ATY47_RS03685	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATY47_RS03685	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATY47_RS03690	PF07977	FabA-like domain
ATY47_RS03695	PF00817	impB/mucB/samB family
ATY47_RS03695	PF11799	impB/mucB/samB family C-terminal domain
ATY47_RS03700	PF13419	Haloacid dehalogenase-like hydrolase
ATY47_RS03710	PF13185	GAF domain
ATY47_RS03725	PF01242	6-pyruvoyl tetrahydropterin synthase
ATY47_RS03735	PF00270	DEAD/DEAH box helicase
ATY47_RS03735	PF00271	Helicase conserved C-terminal domain
ATY47_RS03745	PF13417	Glutathione S-transferase, N-terminal domain
ATY47_RS03750	PF00437	Type II/IV secretion system protein
ATY47_RS03770	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS03770	PF00571	CBS domain
ATY47_RS03775	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATY47_RS03780	PF01370	NAD dependent epimerase/dehydratase family
ATY47_RS03810	PF00872	Transposase, Mutator family
ATY47_RS03820	PF00005	ABC transporter
ATY47_RS03830	PF00766	Electron transfer flavoprotein FAD-binding domain
ATY47_RS03830	PF01012	Electron transfer flavoprotein domain
ATY47_RS03835	PF01012	Electron transfer flavoprotein domain
ATY47_RS03840	PF16363	GDP-mannose 4,6 dehydratase
ATY47_RS03845	PF00483	Nucleotidyl transferase
ATY47_RS03850	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
ATY47_RS03855	PF04321	RmlD substrate binding domain
ATY47_RS03860	PF01050	Mannose-6-phosphate isomerase
ATY47_RS03860	PF00483	Nucleotidyl transferase
ATY47_RS03865	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ATY47_RS03865	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
ATY47_RS03865	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
ATY47_RS03865	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
ATY47_RS03870	PF01144	Coenzyme A transferase
ATY47_RS03875	PF01144	Coenzyme A transferase
ATY47_RS03880	PF14307	Glycosyltransferase WbsX
ATY47_RS03880	PF05045	Rhamnan synthesis protein F
ATY47_RS03900	PF03886	ABC-type transport auxiliary lipoprotein component
ATY47_RS03900	PF02470	MlaD protein
ATY47_RS03905	PF00005	ABC transporter
ATY47_RS03910	PF02405	Permease MlaE
ATY47_RS03920	PF00816	H-NS histone family
ATY47_RS03925	PF03129	Anticodon binding domain
ATY47_RS03925	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATY47_RS03925	PF04073	Aminoacyl-tRNA editing domain
ATY47_RS03935	PF01066	CDP-alcohol phosphatidyltransferase
ATY47_RS03960	PF05598	Transposase domain (DUF772)
ATY47_RS03960	PF01609	Transposase DDE domain
ATY47_RS03970	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
ATY47_RS03970	PF01464	Transglycosylase SLT domain
ATY47_RS03975	PF00544	Pectate lyase
ATY47_RS04000	PF13276	HTH-like domain
ATY47_RS04000	PF13683	Integrase core domain
ATY47_RS04005	PF01527	Transposase
ATY47_RS04015	PF00133	tRNA synthetases class I (I, L, M and V)
ATY47_RS04015	PF08264	Anticodon-binding domain of tRNA
ATY47_RS04015	PF10458	Valyl tRNA synthetase tRNA binding arm
ATY47_RS04030	PF02789	Cytosol aminopeptidase family, N-terminal domain
ATY47_RS04030	PF00883	Cytosol aminopeptidase family, catalytic domain
ATY47_RS04040	PF03739	Lipopolysaccharide export system permease LptF/LptG
ATY47_RS04050	PF02899	Phage integrase, N-terminal SAM-like domain
ATY47_RS04050	PF00589	Phage integrase family
ATY47_RS04055	PF13098	Thioredoxin-like domain
ATY47_RS04055	PF10411	Disulfide bond isomerase protein N-terminus
ATY47_RS04060	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
ATY47_RS04060	PF02769	AIR synthase related protein, C-terminal domain
ATY47_RS04060	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
ATY47_RS04065	PF03895	YadA-like membrane anchor domain
ATY47_RS04065	PF05662	Coiled stalk of trimeric autotransporter adhesin
ATY47_RS04065	PF05658	Head domain of trimeric autotransporter adhesin
ATY47_RS04065	PF13018	Extended Signal Peptide of Type V secretion system
ATY47_RS04085	PF00437	Type II/IV secretion system protein
ATY47_RS04085	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
ATY47_RS04095	PF00482	Type II secretion system (T2SS), protein F
ATY47_RS04100	PF08334	Type II secretion system (T2SS), protein G
ATY47_RS04105	PF12019	Type II transport protein GspH
ATY47_RS04110	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS04120	PF03934	Type II secretion system (T2SS), protein K
ATY47_RS04125	PF05137	Fimbrial assembly protein (PilN)
ATY47_RS04130	PF10741	Type II secretion system (T2SS), protein M subtype b
ATY47_RS04140	PF00263	Bacterial type II and III secretion system protein
ATY47_RS04140	PF03958	Bacterial type II/III secretion system short domain
ATY47_RS04155	PF07702	UTRA domain
ATY47_RS04155	PF00392	Bacterial regulatory proteins, gntR family
ATY47_RS04170	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS04170	PF00593	TonB dependent receptor
ATY47_RS04195	PF09827	CRISPR associated protein Cas2
ATY47_RS04200	PF01867	CRISPR associated protein Cas1
ATY47_RS04220	PF09704	CRISPR-associated protein (Cas_Cas5)
ATY47_RS04235	PF02545	Maf-like protein
ATY47_RS04240	PF02620	Large ribosomal RNA subunit accumulation protein YceD
ATY47_RS04245	PF01783	Ribosomal L32p protein family
ATY47_RS04250	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ATY47_RS04250	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
ATY47_RS04260	PF00698	Acyl transferase domain
ATY47_RS04270	PF00550	Phosphopantetheine attachment site
ATY47_RS04275	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATY47_RS04275	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATY47_RS04280	PF04715	Anthranilate synthase component I, N terminal region
ATY47_RS04280	PF00425	chorismate binding enzyme
ATY47_RS04285	PF02618	YceG-like family
ATY47_RS04290	PF09115	DNA polymerase III, delta subunit, C terminal
ATY47_RS04310	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS04325	PF00158	Sigma-54 interaction domain
ATY47_RS04325	PF06506	Propionate catabolism activator
ATY47_RS04325	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS04335	PF00285	Citrate synthase, C-terminal domain
ATY47_RS04340	PF00694	Aconitase C-terminal domain
ATY47_RS04340	PF00330	Aconitase family (aconitate hydratase)
ATY47_RS04345	PF04303	PrpF protein
ATY47_RS04350	PF05598	Transposase domain (DUF772)
ATY47_RS04350	PF01609	Transposase DDE domain
ATY47_RS04355	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS04355	PF00593	TonB dependent receptor
ATY47_RS04395	PF13936	Helix-turn-helix domain
ATY47_RS04395	PF00665	Integrase core domain
ATY47_RS04405	PF08534	Redoxin
ATY47_RS04415	PF00226	DnaJ domain
ATY47_RS04415	PF01556	DnaJ C terminal domain
ATY47_RS04420	PF00072	Response regulator receiver domain
ATY47_RS04425	PF12221	Bacterial membrane protein N terminal
ATY47_RS04425	PF01145	SPFH domain / Band 7 family
ATY47_RS04430	PF01145	SPFH domain / Band 7 family
ATY47_RS04440	PF00709	Adenylosuccinate synthetase
ATY47_RS04445	PF11838	ERAP1-like C-terminal domain
ATY47_RS04445	PF01433	Peptidase family M1 domain
ATY47_RS04455	PF05598	Transposase domain (DUF772)
ATY47_RS04470	PF01609	Transposase DDE domain
ATY47_RS04470	PF05598	Transposase domain (DUF772)
ATY47_RS04490	PF03279	Bacterial lipid A biosynthesis acyltransferase
ATY47_RS04495	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
ATY47_RS04500	PF02321	Outer membrane efflux protein
ATY47_RS04530	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS04535	PF00330	Aconitase family (aconitate hydratase)
ATY47_RS04540	PF00694	Aconitase C-terminal domain
ATY47_RS04550	PF00180	Isocitrate/isopropylmalate dehydrogenase
ATY47_RS04555	PF00682	HMGL-like
ATY47_RS04555	PF08502	LeuA allosteric (dimerisation) domain
ATY47_RS04560	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS04570	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ATY47_RS04570	PF00205	Thiamine pyrophosphate enzyme, central domain
ATY47_RS04570	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
ATY47_RS04575	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
ATY47_RS04575	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
ATY47_RS04585	PF01964	Radical SAM ThiC family
ATY47_RS04585	PF13667	ThiC-associated domain 
ATY47_RS04590	PF18500	CadC C-terminal domain 1
ATY47_RS04590	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS04595	PF12833	Helix-turn-helix domain
ATY47_RS04600	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS04600	PF00593	TonB dependent receptor
ATY47_RS04615	PF00719	Inorganic pyrophosphatase
ATY47_RS04645	PF00365	Phosphofructokinase
ATY47_RS04655	PF01225	Mur ligase family, catalytic domain
ATY47_RS04655	PF08245	Mur ligase middle domain
ATY47_RS04655	PF02875	Mur ligase family, glutamate ligase domain
ATY47_RS04665	PF01062	Bestrophin, RFP-TM, chloride channel
ATY47_RS04680	PF02798	Glutathione S-transferase, N-terminal domain
ATY47_RS04680	PF00043	Glutathione S-transferase, C-terminal domain
ATY47_RS04685	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
ATY47_RS04685	PF00056	lactate/malate dehydrogenase, NAD binding domain
ATY47_RS04690	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
ATY47_RS04695	PF00679	Elongation factor G C-terminus
ATY47_RS04695	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS04695	PF03144	Elongation factor Tu domain 2
ATY47_RS04715	PF01474	Class-II DAHP synthetase family
ATY47_RS04725	PF02600	Disulfide bond formation protein DsbB
ATY47_RS04730	PF05598	Transposase domain (DUF772)
ATY47_RS04735	PF01527	Transposase
ATY47_RS04740	PF13276	HTH-like domain
ATY47_RS04740	PF13683	Integrase core domain
ATY47_RS04745	PF05598	Transposase domain (DUF772)
ATY47_RS04765	PF13276	HTH-like domain
ATY47_RS04765	PF13683	Integrase core domain
ATY47_RS04785	PF13936	Helix-turn-helix domain
ATY47_RS04785	PF00665	Integrase core domain
ATY47_RS04800	PF05598	Transposase domain (DUF772)
ATY47_RS04815	PF01527	Transposase
ATY47_RS04845	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS04865	PF01609	Transposase DDE domain
ATY47_RS04865	PF05598	Transposase domain (DUF772)
ATY47_RS04885	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS04890	PF03009	Glycerophosphoryl diester phosphodiesterase family
ATY47_RS04915	PF00180	Isocitrate/isopropylmalate dehydrogenase
ATY47_RS04915	PF18324	Hypothetical protein TT1725
ATY47_RS04945	PF01527	Transposase
ATY47_RS04970	PF05698	Bacterial trigger factor protein (TF) C-terminus
ATY47_RS04970	PF05697	Bacterial trigger factor protein (TF)
ATY47_RS04975	PF00574	Clp protease
ATY47_RS04980	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS04980	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS04980	PF06689	ClpX C4-type zinc finger
ATY47_RS04985	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS04985	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
ATY47_RS04985	PF05362	Lon protease (S16) C-terminal proteolytic domain
ATY47_RS04990	PF00216	Bacterial DNA-binding protein
ATY47_RS05015	PF05257	CHAP domain
ATY47_RS05015	PF01476	LysM domain
ATY47_RS05020	PF16123	Hydroxyacylglutathione hydrolase C-terminus
ATY47_RS05020	PF00753	Metallo-beta-lactamase superfamily
ATY47_RS05030	PF00075	RNase H
ATY47_RS05035	PF00929	Exonuclease
ATY47_RS05070	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS05070	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS05070	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS05130	PF00589	Phage integrase family
ATY47_RS05130	PF13356	Arm DNA-binding domain
ATY47_RS05140	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
ATY47_RS05150	PF00753	Metallo-beta-lactamase superfamily
ATY47_RS05150	PF12706	Beta-lactamase superfamily domain
ATY47_RS05155	PF04055	Radical SAM superfamily
ATY47_RS05155	PF06463	Molybdenum Cofactor Synthesis C
ATY47_RS05165	PF01967	MoaC family
ATY47_RS05170	PF02597	ThiS family
ATY47_RS05175	PF02391	MoaE protein
ATY47_RS05190	PF12169	DNA polymerase III subunits gamma and tau domain III
ATY47_RS05190	PF12170	DNA polymerase III tau subunit V interacting with alpha
ATY47_RS05190	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
ATY47_RS05195	PF02575	YbaB/EbfC DNA-binding family
ATY47_RS05200	PF13662	Toprim domain
ATY47_RS05200	PF02132	RecR protein
ATY47_RS05205	PF01230	HIT domain
ATY47_RS05215	PF01841	Transglutaminase-like superfamily
ATY47_RS05215	PF13559	Domain of unknown function (DUF4129)
ATY47_RS05215	PF11992	Domain of unknown function (DUF3488)
ATY47_RS05225	PF17863	AAA lid domain
ATY47_RS05225	PF07726	ATPase family associated with various cellular activities (AAA)
ATY47_RS05245	PF01327	Polypeptide deformylase
ATY47_RS05290	PF01609	Transposase DDE domain
ATY47_RS05290	PF05598	Transposase domain (DUF772)
ATY47_RS05310	PF00462	Glutaredoxin
ATY47_RS05315	PF01522	Polysaccharide deacetylase
ATY47_RS05335	PF00155	Aminotransferase class I and II
ATY47_RS05340	PF03193	RsgA GTPase
ATY47_RS05355	PF00128	Alpha amylase, catalytic domain
ATY47_RS05375	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS05380	PF00106	short chain dehydrogenase
ATY47_RS05385	PF03600	Citrate transporter
ATY47_RS05395	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS05395	PF00072	Response regulator receiver domain
ATY47_RS05400	PF08521	Two-component sensor kinase N-terminal
ATY47_RS05400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS05400	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS05410	PF00072	Response regulator receiver domain
ATY47_RS05410	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS05435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS05435	PF03466	LysR substrate binding domain
ATY47_RS05445	PF07690	Major Facilitator Superfamily
ATY47_RS05450	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS05450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS05465	PF00375	Sodium:dicarboxylate symporter family
ATY47_RS05470	PF03949	Malic enzyme, NAD binding domain
ATY47_RS05470	PF00390	Malic enzyme, N-terminal domain
ATY47_RS05470	PF01515	Phosphate acetyl/butaryl transferase
ATY47_RS05480	PF01527	Transposase
ATY47_RS05485	PF13683	Integrase core domain
ATY47_RS05485	PF13276	HTH-like domain
ATY47_RS05490	PF13333	Integrase core domain
ATY47_RS05490	PF00665	Integrase core domain
ATY47_RS05490	PF13276	HTH-like domain
ATY47_RS05495	PF01527	Transposase
ATY47_RS05510	PF02581	Thiamine monophosphate synthase
ATY47_RS05515	PF00301	Rubredoxin
ATY47_RS05520	PF13369	Transglutaminase-like superfamily
ATY47_RS05530	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
ATY47_RS05540	PF01812	5-formyltetrahydrofolate cyclo-ligase family
ATY47_RS05550	PF05164	Cell division protein ZapA
ATY47_RS05560	PF03695	Uncharacterised protein family (UPF0149)
ATY47_RS05565	PF00557	Metallopeptidase family M24
ATY47_RS05565	PF05195	Aminopeptidase P, N-terminal domain
ATY47_RS05580	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS05590	PF00557	Metallopeptidase family M24
ATY47_RS05605	PF06969	HemN C-terminal domain
ATY47_RS05605	PF04055	Radical SAM superfamily
ATY47_RS05610	PF01725	Ham1 family
ATY47_RS05620	PF03725	3' exoribonuclease family, domain 2
ATY47_RS05620	PF01138	3' exoribonuclease family, domain 1
ATY47_RS05625	PF08340	Domain of unknown function (DUF1732)
ATY47_RS05625	PF03755	YicC-like family, N-terminal region 
ATY47_RS05630	PF00625	Guanylate kinase
ATY47_RS05645	PF01192	RNA polymerase Rpb6 
ATY47_RS05650	PF13291	ACT domain
ATY47_RS05650	PF04607	Region found in RelA / SpoT proteins
ATY47_RS05650	PF02824	TGS domain
ATY47_RS05655	PF01042	Endoribonuclease L-PSP
ATY47_RS05660	PF00270	DEAD/DEAH box helicase
ATY47_RS05660	PF00271	Helicase conserved C-terminal domain
ATY47_RS05660	PF17191	RecG wedge domain
ATY47_RS05665	PF01156	Inosine-uridine preferring nucleoside hydrolase
ATY47_RS05670	PF01197	Ribosomal protein L31
ATY47_RS05675	PF00285	Citrate synthase, C-terminal domain
ATY47_RS05690	PF17092	Penicillin-binding protein OB-like domain
ATY47_RS05690	PF00912	Transglycosylase
ATY47_RS05690	PF00905	Penicillin binding protein transpeptidase domain
ATY47_RS05695	PF11104	Type IV pilus assembly protein PilM;
ATY47_RS05700	PF05137	Fimbrial assembly protein (PilN)
ATY47_RS05705	PF04350	Pilus assembly protein, PilO
ATY47_RS05710	PF04351	Pilus assembly protein, PilP
ATY47_RS05715	PF03958	Bacterial type II/III secretion system short domain
ATY47_RS05715	PF07660	Secretin and TonB N terminus short domain
ATY47_RS05715	PF11741	AMIN domain
ATY47_RS05715	PF00263	Bacterial type II and III secretion system protein
ATY47_RS05735	PF17863	AAA lid domain
ATY47_RS05735	PF07726	ATPase family associated with various cellular activities (AAA)
ATY47_RS05755	PF07584	Aerotolerance regulator N-terminal
ATY47_RS05755	PF00092	von Willebrand factor type A domain
ATY47_RS05775	PF00375	Sodium:dicarboxylate symporter family
ATY47_RS05780	PF00456	Transketolase, thiamine diphosphate binding domain
ATY47_RS05780	PF02780	Transketolase, C-terminal domain
ATY47_RS05780	PF02779	Transketolase, pyrimidine binding domain
ATY47_RS05785	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS05785	PF00593	TonB dependent receptor
ATY47_RS05790	PF01551	Peptidase family M23
ATY47_RS05790	PF04225	Opacity-associated protein A LysM-like domain
ATY47_RS05795	PF03734	L,D-transpeptidase catalytic domain
ATY47_RS05795	PF01476	LysM domain
ATY47_RS05820	PF00501	AMP-binding enzyme
ATY47_RS05840	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS05840	PF00072	Response regulator receiver domain
ATY47_RS05845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS05845	PF08521	Two-component sensor kinase N-terminal
ATY47_RS05845	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS05865	PF00005	ABC transporter
ATY47_RS05865	PF03459	TOBE domain
ATY47_RS05870	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS05880	PF04273	Putative phosphatase (DUF442)
ATY47_RS05880	PF00753	Metallo-beta-lactamase superfamily
ATY47_RS05915	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
ATY47_RS05915	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ATY47_RS05920	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS05935	PF00672	HAMP domain
ATY47_RS05935	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS05935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS05940	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS05940	PF00072	Response regulator receiver domain
ATY47_RS05950	PF18030	RimK PreATP-grasp domain
ATY47_RS05950	PF08443	RimK-like ATP-grasp domain
ATY47_RS05990	PF00027	Cyclic nucleotide-binding domain
ATY47_RS05990	PF00520	Ion transport protein
ATY47_RS05995	PF00202	Aminotransferase class-III
ATY47_RS06010	PF01593	Flavin containing amine oxidoreductase
ATY47_RS06015	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
ATY47_RS06015	PF00034	Cytochrome c
ATY47_RS06030	PF00155	Aminotransferase class I and II
ATY47_RS06040	PF00127	Copper binding proteins, plastocyanin/azurin family
ATY47_RS06050	PF00202	Aminotransferase class-III
ATY47_RS06065	PF13276	HTH-like domain
ATY47_RS06065	PF00665	Integrase core domain
ATY47_RS06065	PF13333	Integrase core domain
ATY47_RS06075	PF03377	TAL effector repeat
ATY47_RS06105	PF03377	TAL effector repeat
ATY47_RS06140	PF03377	TAL effector repeat
ATY47_RS06160	PF01208	Uroporphyrinogen decarboxylase (URO-D)
ATY47_RS06170	PF01761	3-dehydroquinate synthase
ATY47_RS06175	PF01202	Shikimate kinase
ATY47_RS06180	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
ATY47_RS06180	PF01243	Pyridoxamine 5'-phosphate oxidase
ATY47_RS06190	PF04012	PspA/IM30 family
ATY47_RS06215	PF03738	Glutathionylspermidine synthase preATP-grasp
ATY47_RS06225	PF00376	MerR family regulatory protein
ATY47_RS06225	PF09278	MerR, DNA binding
ATY47_RS06255	PF04820	Tryptophan halogenase
ATY47_RS06260	PF12706	Beta-lactamase superfamily domain
ATY47_RS06280	PF00324	Amino acid permease
ATY47_RS06285	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS06290	PF00561	alpha/beta hydrolase fold
ATY47_RS06300	PF00324	Amino acid permease
ATY47_RS06310	PF01654	Cytochrome bd terminal oxidase subunit I
ATY47_RS06315	PF02322	Cytochrome bd terminal oxidase subunit II
ATY47_RS06320	PF00756	Putative esterase
ATY47_RS06325	PF01769	Divalent cation transporter
ATY47_RS06325	PF03448	MgtE intracellular N domain
ATY47_RS06325	PF00571	CBS domain
ATY47_RS06330	PF02896	PEP-utilising enzyme, TIM barrel domain
ATY47_RS06330	PF00391	PEP-utilising enzyme, mobile domain
ATY47_RS06330	PF05524	PEP-utilising enzyme, N-terminal
ATY47_RS06335	PF00381	PTS HPr component phosphorylation site
ATY47_RS06345	PF03668	P-loop ATPase protein family
ATY47_RS06350	PF07475	HPr Serine kinase C-terminal domain
ATY47_RS06350	PF02603	HPr Serine kinase N terminus
ATY47_RS06355	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
ATY47_RS06360	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
ATY47_RS06365	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
ATY47_RS06365	PF04963	Sigma-54 factor, core binding domain
ATY47_RS06365	PF04552	Sigma-54, DNA binding domain
ATY47_RS06370	PF00005	ABC transporter
ATY47_RS06375	PF03968	OstA-like protein
ATY47_RS06390	PF00571	CBS domain
ATY47_RS06390	PF01380	SIS domain
ATY47_RS06395	PF01722	BolA-like protein
ATY47_RS06400	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
ATY47_RS06420	PF00551	Formyl transferase
ATY47_RS06435	PF00586	AIR synthase related protein, N-terminal domain
ATY47_RS06435	PF02769	AIR synthase related protein, C-terminal domain
ATY47_RS06445	PF01594	AI-2E family transporter
ATY47_RS06450	PF00308	Bacterial dnaA  protein
ATY47_RS06455	PF00483	Nucleotidyl transferase
ATY47_RS06460	PF01636	Phosphotransferase enzyme family
ATY47_RS06480	PF07687	Peptidase dimerisation domain
ATY47_RS06480	PF01546	Peptidase family M20/M25/M40
ATY47_RS06495	PF01527	Transposase
ATY47_RS06510	PF05598	Transposase domain (DUF772)
ATY47_RS06530	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
ATY47_RS06535	PF01263	Aldose 1-epimerase
ATY47_RS06540	PF01578	Cytochrome C assembly protein
ATY47_RS06550	PF00448	SRP54-type protein, GTPase domain
ATY47_RS06550	PF02881	SRP54-type protein, helical bundle domain
ATY47_RS06550	PF02978	Signal peptide binding domain
ATY47_RS06565	PF03060	Nitronate monooxygenase
ATY47_RS06575	PF00886	Ribosomal protein S16
ATY47_RS06580	PF01782	RimM N-terminal domain
ATY47_RS06580	PF05239	PRC-barrel domain
ATY47_RS06585	PF01746	tRNA (Guanine-1)-methyltransferase
ATY47_RS06590	PF01245	Ribosomal protein L19
ATY47_RS06600	PF01554	MatE
ATY47_RS06605	PF01479	S4 domain
ATY47_RS06625	PF01541	GIY-YIG catalytic domain
ATY47_RS06630	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS06630	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS06630	PF17871	AAA lid domain
ATY47_RS06630	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS06630	PF02861	Clp amino terminal domain, pathogenicity island component
ATY47_RS06645	PF01527	Transposase
ATY47_RS06660	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS06660	PF00593	TonB dependent receptor
ATY47_RS06685	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
ATY47_RS06685	PF12557	Cob(I)alamin adenosyltransferase N terminal 
ATY47_RS06690	PF00155	Aminotransferase class I and II
ATY47_RS06695	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
ATY47_RS06700	PF02277	Phosphoribosyltransferase
ATY47_RS06710	PF02654	Cobalamin-5-phosphate synthase
ATY47_RS06720	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
ATY47_RS06720	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
ATY47_RS06725	PF06276	Ferric iron reductase FhuF-like transporter
ATY47_RS06725	PF04183	IucA / IucC family
ATY47_RS06730	PF07690	Major Facilitator Superfamily
ATY47_RS06735	PF04183	IucA / IucC family
ATY47_RS06735	PF06276	Ferric iron reductase FhuF-like transporter
ATY47_RS06745	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS06745	PF07660	Secretin and TonB N terminus short domain
ATY47_RS06745	PF00593	TonB dependent receptor
ATY47_RS06755	PF13276	HTH-like domain
ATY47_RS06755	PF13683	Integrase core domain
ATY47_RS06760	PF02254	TrkA-N domain
ATY47_RS06760	PF00999	Sodium/hydrogen exchanger family
ATY47_RS06770	PF00593	TonB dependent receptor
ATY47_RS06770	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS06775	PF00593	TonB dependent receptor
ATY47_RS06775	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS06790	PF00593	TonB dependent receptor
ATY47_RS06790	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS06795	PF12848	ABC transporter
ATY47_RS06795	PF00005	ABC transporter
ATY47_RS06810	PF03466	LysR substrate binding domain
ATY47_RS06810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS06820	PF13472	GDSL-like Lipase/Acylhydrolase family
ATY47_RS06820	PF07859	alpha/beta hydrolase fold
ATY47_RS06845	PF12833	Helix-turn-helix domain
ATY47_RS06850	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS06850	PF00183	Hsp90 protein
ATY47_RS06865	PF13276	HTH-like domain
ATY47_RS06870	PF01527	Transposase
ATY47_RS06880	PF00872	Transposase, Mutator family
ATY47_RS06895	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATY47_RS06910	PF13276	HTH-like domain
ATY47_RS06910	PF13683	Integrase core domain
ATY47_RS06915	PF01527	Transposase
ATY47_RS06920	PF01609	Transposase DDE domain
ATY47_RS06920	PF05598	Transposase domain (DUF772)
ATY47_RS06925	PF00355	Rieske [2Fe-2S] domain
ATY47_RS06935	PF00266	Aminotransferase class-V
ATY47_RS06940	PF01458	Uncharacterized protein family (UPF0051)
ATY47_RS06945	PF00005	ABC transporter
ATY47_RS06950	PF01458	Uncharacterized protein family (UPF0051)
ATY47_RS06955	PF02082	Transcriptional regulator
ATY47_RS06975	PF01965	DJ-1/PfpI family
ATY47_RS07010	PF03807	NADP oxidoreductase coenzyme F420-dependent
ATY47_RS07010	PF14748	Pyrroline-5-carboxylate reductase dimerisation
ATY47_RS07015	PF01168	Alanine racemase, N-terminal domain
ATY47_RS07020	PF00437	Type II/IV secretion system protein
ATY47_RS07025	PF00437	Type II/IV secretion system protein
ATY47_RS07045	PF13302	Acetyltransferase (GNAT) domain
ATY47_RS07045	PF13673	Acetyltransferase (GNAT) domain
ATY47_RS07045	PF03352	Methyladenine glycosylase
ATY47_RS07045	PF00117	Glutamine amidotransferase class-I
ATY47_RS07045	PF00958	GMP synthase C terminal domain
ATY47_RS07060	PF02622	Uncharacterized ACR, COG1678
ATY47_RS07065	PF03652	Holliday junction resolvase
ATY47_RS07070	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
ATY47_RS07070	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
ATY47_RS07080	PF02566	OsmC-like protein
ATY47_RS07090	PF02567	Phenazine biosynthesis-like protein
ATY47_RS07095	PF02567	Phenazine biosynthesis-like protein
ATY47_RS07100	PF02567	Phenazine biosynthesis-like protein
ATY47_RS07105	PF00696	Amino acid kinase family
ATY47_RS07105	PF01842	ACT domain
ATY47_RS07120	PF08245	Mur ligase middle domain
ATY47_RS07135	PF00348	Polyprenyl synthetase
ATY47_RS07140	PF00436	Single-strand binding protein family
ATY47_RS07145	PF00563	EAL domain
ATY47_RS07145	PF00360	Phytochrome region
ATY47_RS07145	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS07145	PF01590	GAF domain
ATY47_RS07150	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATY47_RS07150	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATY47_RS07150	PF14765	Polyketide synthase dehydratase
ATY47_RS07150	PF00698	Acyl transferase domain
ATY47_RS07150	PF00107	Zinc-binding dehydrogenase
ATY47_RS07150	PF00550	Phosphopantetheine attachment site
ATY47_RS07150	PF08659	KR domain
ATY47_RS07150	PF16197	Ketoacyl-synthetase C-terminal extension
ATY47_RS07150	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS07180	PF04328	Selenoprotein, putative 
ATY47_RS07185	PF02554	Carbon starvation protein CstA
ATY47_RS07185	PF13722	5TM C-terminal transporter carbon starvation CstA
ATY47_RS07190	PF05726	Pirin C-terminal cupin domain
ATY47_RS07190	PF02678	Pirin
ATY47_RS07200	PF06715	Gp5 C-terminal repeat (3 copies)
ATY47_RS07200	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS07225	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS07225	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS07225	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS07265	PF05726	Pirin C-terminal cupin domain
ATY47_RS07265	PF02678	Pirin
ATY47_RS07275	PF04493	Endonuclease V
ATY47_RS07280	PF00300	Histidine phosphatase superfamily (branch 1)
ATY47_RS07295	PF01431	Peptidase family M13
ATY47_RS07295	PF05649	Peptidase family M13
ATY47_RS07305	PF00072	Response regulator receiver domain
ATY47_RS07305	PF01339	CheB methylesterase
ATY47_RS07310	PF03705	CheR methyltransferase, all-alpha domain
ATY47_RS07310	PF01739	CheR methyltransferase, SAM binding domain
ATY47_RS07315	PF13426	PAS domain
ATY47_RS07315	PF00563	EAL domain
ATY47_RS07315	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS07320	PF01584	CheW-like domain
ATY47_RS07325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS07325	PF02203	Tar ligand binding domain homologue
ATY47_RS07325	PF00672	HAMP domain
ATY47_RS07330	PF09078	CheY binding
ATY47_RS07330	PF02895	Signal transducing histidine kinase, homodimeric domain
ATY47_RS07330	PF01584	CheW-like domain
ATY47_RS07330	PF01627	Hpt domain
ATY47_RS07330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS07340	PF00271	Helicase conserved C-terminal domain
ATY47_RS07340	PF03461	TRCF domain
ATY47_RS07340	PF02559	CarD-like/TRCF domain
ATY47_RS07340	PF00270	DEAD/DEAH box helicase
ATY47_RS07340	PF17757	UvrB interaction domain
ATY47_RS07350	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
ATY47_RS07360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS07360	PF00672	HAMP domain
ATY47_RS07360	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS07385	PF05598	Transposase domain (DUF772)
ATY47_RS07385	PF01609	Transposase DDE domain
ATY47_RS07405	PF05598	Transposase domain (DUF772)
ATY47_RS07405	PF01609	Transposase DDE domain
ATY47_RS07425	PF05598	Transposase domain (DUF772)
ATY47_RS07425	PF01609	Transposase DDE domain
ATY47_RS07440	PF00749	tRNA synthetases class I (E and Q), catalytic domain
ATY47_RS07445	PF01475	Ferric uptake regulator family
ATY47_RS07465	PF05598	Transposase domain (DUF772)
ATY47_RS07475	PF00313	'Cold-shock' DNA-binding domain
ATY47_RS07490	PF00899	ThiF family
ATY47_RS07495	PF01026	TatD related DNase
ATY47_RS07510	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS07510	PF02770	Acyl-CoA dehydrogenase, middle domain
ATY47_RS07510	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS07535	PF13417	Glutathione S-transferase, N-terminal domain
ATY47_RS07540	PF00733	Asparagine synthase
ATY47_RS07540	PF13537	Glutamine amidotransferase domain
ATY47_RS07545	PF03358	NADPH-dependent FMN reductase
ATY47_RS07550	PF00772	DnaB-like helicase N terminal domain
ATY47_RS07550	PF03796	DnaB-like helicase C terminal domain
ATY47_RS07555	PF00875	DNA photolyase
ATY47_RS07555	PF03441	FAD binding domain of DNA photolyase
ATY47_RS07570	PF00691	OmpA family
ATY47_RS07570	PF05736	OprF membrane domain
ATY47_RS07590	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS07590	PF00593	TonB dependent receptor
ATY47_RS07610	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS07610	PF00107	Zinc-binding dehydrogenase
ATY47_RS07615	PF00654	Voltage gated chloride channel
ATY47_RS07625	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
ATY47_RS07625	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
ATY47_RS07630	PF06029	AlkA N-terminal domain
ATY47_RS07630	PF00730	HhH-GPD superfamily base excision DNA repair protein
ATY47_RS07630	PF02805	Metal binding domain of Ada
ATY47_RS07630	PF12833	Helix-turn-helix domain
ATY47_RS07680	PF03880	DbpA RNA binding domain   
ATY47_RS07680	PF00270	DEAD/DEAH box helicase
ATY47_RS07680	PF00271	Helicase conserved C-terminal domain
ATY47_RS07685	PF08448	PAS fold
ATY47_RS07685	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS07685	PF00563	EAL domain
ATY47_RS07690	PF01479	S4 domain
ATY47_RS07690	PF00849	RNA pseudouridylate synthase
ATY47_RS07710	PF03737	Aldolase/RraA
ATY47_RS07715	PF00144	Beta-lactamase
ATY47_RS07720	PF00999	Sodium/hydrogen exchanger family
ATY47_RS07725	PF00672	HAMP domain
ATY47_RS07725	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS07725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS07730	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS07730	PF00072	Response regulator receiver domain
ATY47_RS07735	PF02321	Outer membrane efflux protein
ATY47_RS07750	PF00873	AcrB/AcrD/AcrF family
ATY47_RS07760	PF00005	ABC transporter
ATY47_RS07760	PF00664	ABC transporter transmembrane region
ATY47_RS07770	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS07780	PF01609	Transposase DDE domain
ATY47_RS07780	PF05598	Transposase domain (DUF772)
ATY47_RS07790	PF05598	Transposase domain (DUF772)
ATY47_RS07790	PF01609	Transposase DDE domain
ATY47_RS07795	PF03527	RHS protein
ATY47_RS07800	PF05598	Transposase domain (DUF772)
ATY47_RS07800	PF01609	Transposase DDE domain
ATY47_RS07820	PF01121	Dephospho-CoA kinase
ATY47_RS07825	PF01478	Type IV leader peptidase family
ATY47_RS07825	PF06750	Bacterial Peptidase A24 N-terminal domain
ATY47_RS07830	PF00482	Type II secretion system (T2SS), protein F
ATY47_RS07835	PF00114	Pilin (bacterial filament)
ATY47_RS07835	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS07840	PF08019	Phosphoethanolamine transferase EptA/EptB
ATY47_RS07840	PF00884	Sulfatase
ATY47_RS07855	PF00437	Type II/IV secretion system protein
ATY47_RS07855	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
ATY47_RS07860	PF18543	Intracellular delivery domain
ATY47_RS07860	PF02661	Fic/DOC family
ATY47_RS07865	PF00072	Response regulator receiver domain
ATY47_RS07865	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS07865	PF00158	Sigma-54 interaction domain
ATY47_RS07870	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS07870	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS07875	PF08442	ATP-grasp domain
ATY47_RS07875	PF00549	CoA-ligase
ATY47_RS07880	PF00549	CoA-ligase
ATY47_RS07880	PF02629	CoA binding domain
ATY47_RS07890	PF02540	NAD synthase
ATY47_RS07890	PF00795	Carbon-nitrogen hydrolase
ATY47_RS07895	PF13525	Outer membrane lipoprotein
ATY47_RS07900	PF00849	RNA pseudouridylate synthase
ATY47_RS07905	PF02578	Multi-copper polyphenol oxidoreductase laccase
ATY47_RS07920	PF00982	Glycosyltransferase family 20
ATY47_RS07925	PF00723	Glycosyl hydrolases family 15
ATY47_RS07930	PF02358	Trehalose-phosphatase
ATY47_RS07940	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS07940	PF00593	TonB dependent receptor
ATY47_RS07965	PF04377	Arginine-tRNA-protein transferase, C terminus
ATY47_RS07965	PF04376	Arginine-tRNA-protein transferase, N terminus
ATY47_RS07980	PF08281	Sigma-70, region 4
ATY47_RS07980	PF04542	Sigma-70 region 2 
ATY47_RS07995	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS08010	PF17760	UvrA interaction domain
ATY47_RS08010	PF00005	ABC transporter
ATY47_RS08010	PF17755	UvrA DNA-binding domain
ATY47_RS08015	PF00829	Ribosomal prokaryotic L21 protein
ATY47_RS08020	PF01016	Ribosomal L27 protein
ATY47_RS08025	PF01018	GTP1/OBG
ATY47_RS08025	PF01926	50S ribosome-binding GTPase
ATY47_RS08030	PF01649	Ribosomal protein S20
ATY47_RS08035	PF03023	Lipid II flippase MurJ
ATY47_RS08040	PF06574	FAD synthetase
ATY47_RS08040	PF01687	Riboflavin kinase
ATY47_RS08045	PF06827	Zinc finger found in FPG and IleRS
ATY47_RS08045	PF00133	tRNA synthetases class I (I, L, M and V)
ATY47_RS08045	PF08264	Anticodon-binding domain of tRNA
ATY47_RS08050	PF01252	Signal peptidase (SPase) II
ATY47_RS08055	PF02401	LytB protein
ATY47_RS08065	PF06481	COX Aromatic Rich Motif
ATY47_RS08065	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
ATY47_RS08070	PF00115	Cytochrome C and Quinol oxidase polypeptide I
ATY47_RS08075	PF00510	Cytochrome c oxidase subunit III
ATY47_RS08080	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
ATY47_RS08090	PF06715	Gp5 C-terminal repeat (3 copies)
ATY47_RS08090	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS08100	PF14220	Domain of unknown function (DUF4329)
ATY47_RS08100	PF14220	Domain of unknown function (DUF4329)
ATY47_RS08100	PF03527	RHS protein
ATY47_RS08100	PF03527	RHS protein
ATY47_RS08100	PF05593	RHS Repeat
ATY47_RS08100	PF05593	RHS Repeat
ATY47_RS08115	PF01527	Transposase
ATY47_RS08120	PF13276	HTH-like domain
ATY47_RS08120	PF13683	Integrase core domain
ATY47_RS08135	PF00488	MutS domain V
ATY47_RS08135	PF05190	MutS family domain IV
ATY47_RS08135	PF05192	MutS domain III
ATY47_RS08135	PF05188	MutS domain II
ATY47_RS08135	PF01624	MutS domain I
ATY47_RS08145	PF13276	HTH-like domain
ATY47_RS08145	PF13683	Integrase core domain
ATY47_RS08150	PF01527	Transposase
ATY47_RS08160	PF18073	Rubredoxin metal binding domain
ATY47_RS08170	PF01527	Transposase
ATY47_RS08180	PF05506	Domain of unknown function (DUF756)
ATY47_RS08180	PF04185	Phosphoesterase family
ATY47_RS08185	PF05506	Domain of unknown function (DUF756)
ATY47_RS08185	PF04185	Phosphoesterase family
ATY47_RS08190	PF04185	Phosphoesterase family
ATY47_RS08190	PF05506	Domain of unknown function (DUF756)
ATY47_RS08210	PF02938	GAD domain
ATY47_RS08210	PF01336	OB-fold nucleic acid binding domain
ATY47_RS08210	PF00152	tRNA synthetases class II (D, K and N) 
ATY47_RS08225	PF01709	Transcriptional regulator
ATY47_RS08230	PF02075	Crossover junction endodeoxyribonuclease RuvC
ATY47_RS08235	PF01330	RuvA N terminal domain
ATY47_RS08235	PF07499	RuvA, C-terminal domain
ATY47_RS08240	PF02705	K+ potassium transporter
ATY47_RS08245	PF17864	RuvB AAA lid domain
ATY47_RS08245	PF05491	RuvB C-terminal winged helix domain
ATY47_RS08245	PF05496	Holliday junction DNA helicase RuvB P-loop domain
ATY47_RS08250	PF03061	Thioesterase superfamily
ATY47_RS08255	PF01618	MotA/TolQ/ExbB proton channel family
ATY47_RS08260	PF02472	Biopolymer transport protein ExbD/TolR
ATY47_RS08270	PF07676	WD40-like Beta Propeller Repeat
ATY47_RS08270	PF04052	TolB amino-terminal domain
ATY47_RS08275	PF00691	OmpA family
ATY47_RS08285	PF04055	Radical SAM superfamily
ATY47_RS08290	PF01479	S4 domain
ATY47_RS08290	PF00849	RNA pseudouridylate synthase
ATY47_RS08335	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS08340	PF05598	Transposase domain (DUF772)
ATY47_RS08350	PF06508	Queuosine biosynthesis protein QueC
ATY47_RS08490	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
ATY47_RS08510	PF00182	Chitinase class I
ATY47_RS08565	PF01555	DNA methylase
ATY47_RS08590	PF11798	IMS family HHH motif
ATY47_RS08590	PF13438	Domain of unknown function (DUF4113)
ATY47_RS08590	PF00817	impB/mucB/samB family
ATY47_RS08590	PF11799	impB/mucB/samB family C-terminal domain
ATY47_RS08605	PF16124	RecQ zinc-binding
ATY47_RS08605	PF09382	RQC domain
ATY47_RS08605	PF00270	DEAD/DEAH box helicase
ATY47_RS08605	PF00271	Helicase conserved C-terminal domain
ATY47_RS08605	PF00570	HRDC domain
ATY47_RS08610	PF00210	Ferritin-like domain
ATY47_RS08615	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
ATY47_RS08615	PF00271	Helicase conserved C-terminal domain
ATY47_RS08615	PF04408	Helicase associated domain (HA2)
ATY47_RS08615	PF11898	Domain of unknown function (DUF3418)
ATY47_RS08615	PF00270	DEAD/DEAH box helicase
ATY47_RS08625	PF02685	Glucokinase
ATY47_RS08630	PF02685	Glucokinase
ATY47_RS08635	PF02685	Glucokinase
ATY47_RS08645	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS08660	PF04055	Radical SAM superfamily
ATY47_RS08660	PF13186	Iron-sulfur cluster-binding domain
ATY47_RS08665	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
ATY47_RS08670	PF03070	TENA/THI-4/PQQC family
ATY47_RS08675	PF12706	Beta-lactamase superfamily domain
ATY47_RS08680	PF13291	ACT domain
ATY47_RS08680	PF04607	Region found in RelA / SpoT proteins
ATY47_RS08680	PF02824	TGS domain
ATY47_RS08690	PF00535	Glycosyl transferase family 2
ATY47_RS08695	PF00905	Penicillin binding protein transpeptidase domain
ATY47_RS08695	PF14814	Bifunctional transglycosylase second domain
ATY47_RS08695	PF00912	Transglycosylase
ATY47_RS08705	PF13307	Helicase C-terminal domain
ATY47_RS08705	PF04851	Type III restriction enzyme, res subunit
ATY47_RS08710	PF00814	Glycoprotease family
ATY47_RS08715	PF03747	ADP-ribosylglycohydrolase
ATY47_RS08725	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
ATY47_RS08725	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
ATY47_RS08730	PF00072	Response regulator receiver domain
ATY47_RS08735	PF00072	Response regulator receiver domain
ATY47_RS08740	PF01584	CheW-like domain
ATY47_RS08745	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS08745	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
ATY47_RS08750	PF00072	Response regulator receiver domain
ATY47_RS08750	PF01627	Hpt domain
ATY47_RS08750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS08750	PF02895	Signal transducing histidine kinase, homodimeric domain
ATY47_RS08750	PF01584	CheW-like domain
ATY47_RS08765	PF13302	Acetyltransferase (GNAT) domain
ATY47_RS08780	PF00092	von Willebrand factor type A domain
ATY47_RS08780	PF12450	von Willebrand factor 
ATY47_RS08780	PF12034	Domain of unknown function (DUF3520)
ATY47_RS08795	PF01112	Asparaginase
ATY47_RS08800	PF03932	CutC family
ATY47_RS08845	PF01301	Glycosyl hydrolases family 35
ATY47_RS08855	PF07971	Glycosyl hydrolase family 92
ATY47_RS08855	PF17678	Glycosyl hydrolase family 92 N-terminal domain
ATY47_RS08905	PF00005	ABC transporter
ATY47_RS08905	PF03412	Peptidase C39 family
ATY47_RS08905	PF00664	ABC transporter transmembrane region
ATY47_RS08910	PF14310	Fibronectin type III-like domain
ATY47_RS08910	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS08910	PF07691	PA14 domain
ATY47_RS08910	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ATY47_RS08920	PF02838	Glycosyl hydrolase family 20, domain 2
ATY47_RS08920	PF07691	PA14 domain
ATY47_RS08920	PF00728	Glycosyl hydrolase family 20, catalytic domain
ATY47_RS08930	PF01476	LysM domain
ATY47_RS08930	PF00704	Glycosyl hydrolases family 18
ATY47_RS08945	PF02685	Glucokinase
ATY47_RS08950	PF04452	RNA methyltransferase
ATY47_RS08955	PF00202	Aminotransferase class-III
ATY47_RS08960	PF00293	NUDIX domain
ATY47_RS08965	PF00459	Inositol monophosphatase family
ATY47_RS08970	PF03819	MazG nucleotide pyrophosphohydrolase domain
ATY47_RS08985	PF01145	SPFH domain / Band 7 family
ATY47_RS08985	PF16200	C-terminal region of band_7
ATY47_RS08995	PF08669	Glycine cleavage T-protein C-terminal barrel domain
ATY47_RS08995	PF01571	Aminomethyltransferase folate-binding domain
ATY47_RS09000	PF01597	Glycine cleavage H-protein
ATY47_RS09025	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS09025	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS09025	PF09317	Domain of unknown function (DUF1974)
ATY47_RS09030	PF00561	alpha/beta hydrolase fold
ATY47_RS09035	PF00440	Bacterial regulatory proteins, tetR family
ATY47_RS09040	PF00593	TonB dependent receptor
ATY47_RS09040	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS09050	PF01430	Hsp33 protein
ATY47_RS09055	PF00912	Transglycosylase
ATY47_RS09060	PF00535	Glycosyl transferase family 2
ATY47_RS09065	PF00478	IMP dehydrogenase / GMP reductase domain
ATY47_RS09065	PF00571	CBS domain
ATY47_RS09075	PF03006	Haemolysin-III related
ATY47_RS09080	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS09080	PF16658	Class II release factor RF3, C-terminal domain
ATY47_RS09085	PF08525	Opacity-associated protein A N-terminal motif
ATY47_RS09085	PF01476	LysM domain
ATY47_RS09085	PF01551	Peptidase family M23
ATY47_RS09090	PF00561	alpha/beta hydrolase fold
ATY47_RS09095	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATY47_RS09105	PF03315	Serine dehydratase beta chain
ATY47_RS09105	PF03313	Serine dehydratase alpha chain
ATY47_RS09115	PF04264	YceI-like domain
ATY47_RS09125	PF04264	YceI-like domain
ATY47_RS09130	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS09130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS09130	PF00672	HAMP domain
ATY47_RS09130	PF01627	Hpt domain
ATY47_RS09130	PF17149	Periplasmic sensor domain found in signal transduction proteins
ATY47_RS09130	PF00072	Response regulator receiver domain
ATY47_RS09135	PF17149	Periplasmic sensor domain found in signal transduction proteins
ATY47_RS09135	PF00672	HAMP domain
ATY47_RS09135	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS09135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS09135	PF01627	Hpt domain
ATY47_RS09135	PF00072	Response regulator receiver domain
ATY47_RS09140	PF17149	Periplasmic sensor domain found in signal transduction proteins
ATY47_RS09140	PF00672	HAMP domain
ATY47_RS09140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS09140	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS09140	PF00072	Response regulator receiver domain
ATY47_RS09140	PF01627	Hpt domain
ATY47_RS09185	PF06114	IrrE N-terminal-like domain
ATY47_RS09185	PF09856	Predicted transcriptional regulator (DUF2083)
ATY47_RS09185	PF01381	Helix-turn-helix
ATY47_RS09190	PF00171	Aldehyde dehydrogenase family
ATY47_RS09195	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS09195	PF02770	Acyl-CoA dehydrogenase, middle domain
ATY47_RS09195	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS09200	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS09205	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ATY47_RS09205	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS09205	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
ATY47_RS09210	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
ATY47_RS09210	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
ATY47_RS09215	PF01545	Cation efflux family
ATY47_RS09220	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS09220	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
ATY47_RS09220	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ATY47_RS09225	PF04542	Sigma-70 region 2 
ATY47_RS09225	PF08281	Sigma-70, region 4
ATY47_RS09235	PF13180	PDZ domain
ATY47_RS09240	PF06421	GTP-binding protein LepA C-terminus
ATY47_RS09240	PF03144	Elongation factor Tu domain 2
ATY47_RS09240	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS09240	PF00679	Elongation factor G C-terminus
ATY47_RS09245	PF10502	Signal peptidase, peptidase S26 
ATY47_RS09255	PF14622	Ribonuclease-III-like
ATY47_RS09255	PF00035	Double-stranded RNA binding motif
ATY47_RS09260	PF01926	50S ribosome-binding GTPase
ATY47_RS09260	PF07650	KH domain
ATY47_RS09265	PF11967	Recombination protein O N terminal
ATY47_RS09265	PF02565	Recombination protein O C terminal
ATY47_RS09275	PF05958	tRNA (Uracil-5-)-methyltransferase
ATY47_RS09280	PF01928	CYTH domain
ATY47_RS09290	PF05598	Transposase domain (DUF772)
ATY47_RS09295	PF01323	DSBA-like thioredoxin domain
ATY47_RS09300	PF01593	Flavin containing amine oxidoreductase
ATY47_RS09305	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
ATY47_RS09310	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS09315	PF00156	Phosphoribosyl transferase domain
ATY47_RS09320	PF01048	Phosphorylase superfamily
ATY47_RS09325	PF00313	'Cold-shock' DNA-binding domain
ATY47_RS09330	PF01494	FAD binding domain
ATY47_RS09350	PF00271	Helicase conserved C-terminal domain
ATY47_RS09350	PF08494	DEAD/H associated
ATY47_RS09350	PF00270	DEAD/DEAH box helicase
ATY47_RS09355	PF04679	ATP dependent DNA ligase C terminal region        
ATY47_RS09355	PF04675	DNA ligase N terminus
ATY47_RS09355	PF01068	ATP dependent DNA ligase domain
ATY47_RS09365	PF04675	DNA ligase N terminus
ATY47_RS09365	PF01068	ATP dependent DNA ligase domain
ATY47_RS09365	PF04679	ATP dependent DNA ligase C terminal region        
ATY47_RS09380	PF00072	Response regulator receiver domain
ATY47_RS09380	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS09395	PF02803	Thiolase, C-terminal domain
ATY47_RS09395	PF00108	Thiolase, N-terminal domain
ATY47_RS09400	PF12951	Passenger-associated-transport-repeat
ATY47_RS09400	PF03797	Autotransporter beta-domain
ATY47_RS09400	PF00082	Subtilase family
ATY47_RS09405	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ATY47_RS09405	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ATY47_RS09415	PF01863	Protein of unknown function DUF45
ATY47_RS09420	PF07043	Protein of unknown function (DUF1328)
ATY47_RS09430	PF01258	Prokaryotic dksA/traR C4-type zinc finger
ATY47_RS09460	PF05598	Transposase domain (DUF772)
ATY47_RS09460	PF01609	Transposase DDE domain
ATY47_RS09470	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATY47_RS09485	PF08274	PhnA Zinc-Ribbon 
ATY47_RS09485	PF03831	PhnA domain
ATY47_RS09495	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
ATY47_RS09500	PF07690	Major Facilitator Superfamily
ATY47_RS09550	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS09555	PF09924	Uncharacterised conserved protein (DUF2156)
ATY47_RS09555	PF03706	Lysylphosphatidylglycerol synthase TM region
ATY47_RS09570	PF01042	Endoribonuclease L-PSP
ATY47_RS09615	PF04545	Sigma-70, region 4
ATY47_RS09615	PF04542	Sigma-70 region 2 
ATY47_RS09635	PF04060	Putative Fe-S cluster
ATY47_RS09645	PF09334	tRNA synthetases class I (M)
ATY47_RS09645	PF01588	Putative tRNA binding domain
ATY47_RS09655	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ATY47_RS09665	PF00324	Amino acid permease
ATY47_RS09670	PF02574	Homocysteine S-methyltransferase
ATY47_RS09685	PF02592	Putative vitamin uptake transporter
ATY47_RS09700	PF05598	Transposase domain (DUF772)
ATY47_RS09715	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS09755	PF03653	Uncharacterised protein family (UPF0093)
ATY47_RS09780	PF00005	ABC transporter
ATY47_RS09780	PF13732	Domain of unknown function (DUF4162)
ATY47_RS09785	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS09785	PF00593	TonB dependent receptor
ATY47_RS09795	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
ATY47_RS09800	PF01336	OB-fold nucleic acid binding domain
ATY47_RS09800	PF07733	Bacterial DNA polymerase III alpha NTPase domain
ATY47_RS09800	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
ATY47_RS09800	PF14579	Helix-hairpin-helix motif
ATY47_RS09800	PF02811	PHP domain
ATY47_RS09805	PF01351	Ribonuclease HII
ATY47_RS09810	PF02684	Lipid-A-disaccharide synthetase
ATY47_RS09815	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
ATY47_RS09815	PF00132	Bacterial transferase hexapeptide (six repeats)
ATY47_RS09820	PF07977	FabA-like domain
ATY47_RS09825	PF00132	Bacterial transferase hexapeptide (six repeats)
ATY47_RS09825	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
ATY47_RS09830	PF01103	Surface antigen
ATY47_RS09830	PF07244	Surface antigen variable number repeat
ATY47_RS09835	PF17820	PDZ domain
ATY47_RS09835	PF02163	Peptidase family M50
ATY47_RS09840	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
ATY47_RS09840	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
ATY47_RS09840	PF13288	DXP reductoisomerase C-terminal domain
ATY47_RS09850	PF01255	Putative undecaprenyl diphosphate synthase
ATY47_RS09855	PF01765	Ribosome recycling factor
ATY47_RS09860	PF00696	Amino acid kinase family
ATY47_RS09870	PF00889	Elongation factor TS
ATY47_RS09875	PF00318	Ribosomal protein S2
ATY47_RS09910	PF00557	Metallopeptidase family M24
ATY47_RS09915	PF01909	Nucleotidyltransferase domain
ATY47_RS09915	PF01966	HD domain
ATY47_RS09915	PF08335	GlnD PII-uridylyltransferase
ATY47_RS09920	PF14602	Hexapeptide repeat of succinyl-transferase
ATY47_RS09920	PF00132	Bacterial transferase hexapeptide (six repeats)
ATY47_RS09920	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
ATY47_RS09930	PF03960	ArsC family
ATY47_RS09940	PF07687	Peptidase dimerisation domain
ATY47_RS09940	PF01546	Peptidase family M20/M25/M40
ATY47_RS09945	PF13537	Glutamine amidotransferase domain
ATY47_RS09945	PF00733	Asparagine synthase
ATY47_RS09960	PF00593	TonB dependent receptor
ATY47_RS09960	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS09965	PF01804	Penicillin amidase
ATY47_RS09970	PF00210	Ferritin-like domain
ATY47_RS09975	PF00521	DNA gyrase/topoisomerase IV, subunit A
ATY47_RS09975	PF03989	DNA gyrase C-terminal domain, beta-propeller
ATY47_RS09990	PF02321	Outer membrane efflux protein
ATY47_RS09995	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS09995	PF00529	HlyD membrane-fusion protein of T1SS
ATY47_RS10000	PF07690	Major Facilitator Superfamily
ATY47_RS10035	PF00665	Integrase core domain
ATY47_RS10035	PF13936	Helix-turn-helix domain
ATY47_RS10055	PF02780	Transketolase, C-terminal domain
ATY47_RS10055	PF02779	Transketolase, pyrimidine binding domain
ATY47_RS10055	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
ATY47_RS10065	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS10065	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS10065	PF02770	Acyl-CoA dehydrogenase, middle domain
ATY47_RS10065	PF12806	Acetyl-CoA dehydrogenase C-terminal like
ATY47_RS10080	PF00082	Subtilase family
ATY47_RS10085	PF01668	SmpB protein
ATY47_RS10090	PF03364	Polyketide cyclase / dehydrase and lipid transport
ATY47_RS10095	PF03658	RnfH family Ubiquitin
ATY47_RS10100	PF04355	SmpA / OmlA family
ATY47_RS10105	PF01475	Ferric uptake regulator family
ATY47_RS10110	PF02463	RecF/RecN/SMC N terminal domain
ATY47_RS10115	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
ATY47_RS10115	PF01628	HrcA protein C terminal domain
ATY47_RS10120	PF01025	GrpE
ATY47_RS10125	PF00012	Hsp70 protein
ATY47_RS10130	PF00226	DnaJ domain
ATY47_RS10130	PF01556	DnaJ C terminal domain
ATY47_RS10130	PF00684	DnaJ central domain
ATY47_RS10135	PF08543	Phosphomethylpyrimidine kinase
ATY47_RS10140	PF01817	Chorismate mutase type II
ATY47_RS10140	PF02153	Prephenate dehydrogenase
ATY47_RS10155	PF03466	LysR substrate binding domain
ATY47_RS10155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS10165	PF00005	ABC transporter
ATY47_RS10165	PF00664	ABC transporter transmembrane region
ATY47_RS10170	PF01205	Uncharacterized protein family UPF0029
ATY47_RS10175	PF03641	Possible lysine decarboxylase
ATY47_RS10180	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS10180	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
ATY47_RS10185	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
ATY47_RS10185	PF00364	Biotin-requiring enzyme
ATY47_RS10185	PF02817	e3 binding domain
ATY47_RS10190	PF02779	Transketolase, pyrimidine binding domain
ATY47_RS10190	PF00676	Dehydrogenase E1 component
ATY47_RS10190	PF16078	2-oxoglutarate dehydrogenase N-terminus
ATY47_RS10190	PF16870	2-oxoglutarate dehydrogenase C-terminal
ATY47_RS10200	PF08007	Cupin superfamily protein
ATY47_RS10220	PF00206	Lyase
ATY47_RS10220	PF08328	Adenylosuccinate lyase C-terminal
ATY47_RS10240	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS10250	PF00665	Integrase core domain
ATY47_RS10250	PF13936	Helix-turn-helix domain
ATY47_RS10260	PF00206	Lyase
ATY47_RS10260	PF10415	Fumarase C C-terminus
ATY47_RS10290	PF00005	ABC transporter
ATY47_RS10295	PF00392	Bacterial regulatory proteins, gntR family
ATY47_RS10300	PF00255	Glutathione peroxidase
ATY47_RS10305	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATY47_RS10305	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
ATY47_RS10310	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
ATY47_RS10310	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
ATY47_RS10310	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
ATY47_RS10315	PF04102	SlyX
ATY47_RS10330	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS10335	PF07690	Major Facilitator Superfamily
ATY47_RS10340	PF00294	pfkB family carbohydrate kinase
ATY47_RS10350	PF00809	Pterin binding enzyme
ATY47_RS10350	PF02607	B12 binding domain
ATY47_RS10350	PF02574	Homocysteine S-methyltransferase
ATY47_RS10350	PF02965	Vitamin B12 dependent methionine synthase, activation domain
ATY47_RS10350	PF02310	B12 binding domain
ATY47_RS10355	PF00809	Pterin binding enzyme
ATY47_RS10355	PF02574	Homocysteine S-methyltransferase
ATY47_RS10360	PF01209	ubiE/COQ5 methyltransferase family
ATY47_RS10365	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS10365	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS10365	PF02770	Acyl-CoA dehydrogenase, middle domain
ATY47_RS10390	PF08206	Ribonuclease B OB domain
ATY47_RS10390	PF00575	S1 RNA binding domain
ATY47_RS10390	PF08461	Ribonuclease R winged-helix domain
ATY47_RS10390	PF17876	Cold shock domain
ATY47_RS10390	PF00773	RNB domain
ATY47_RS10415	PF08032	RNA 2'-O ribose methyltransferase substrate binding
ATY47_RS10415	PF00588	SpoU rRNA Methylase family
ATY47_RS10425	PF01609	Transposase DDE domain
ATY47_RS10425	PF05598	Transposase domain (DUF772)
ATY47_RS10440	PF00872	Transposase, Mutator family
ATY47_RS10450	PF00313	'Cold-shock' DNA-binding domain
ATY47_RS10455	PF00561	alpha/beta hydrolase fold
ATY47_RS10465	PF05598	Transposase domain (DUF772)
ATY47_RS10465	PF01609	Transposase DDE domain
ATY47_RS10470	PF01609	Transposase DDE domain
ATY47_RS10470	PF05598	Transposase domain (DUF772)
ATY47_RS10515	PF05598	Transposase domain (DUF772)
ATY47_RS10515	PF01609	Transposase DDE domain
ATY47_RS10525	PF05598	Transposase domain (DUF772)
ATY47_RS10530	PF13683	Integrase core domain
ATY47_RS10530	PF13276	HTH-like domain
ATY47_RS10535	PF01527	Transposase
ATY47_RS10545	PF03544	Gram-negative bacterial TonB protein C-terminal
ATY47_RS10550	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATY47_RS10550	PF02403	Seryl-tRNA synthetase N-terminal domain
ATY47_RS10570	PF01609	Transposase DDE domain
ATY47_RS10570	PF05598	Transposase domain (DUF772)
ATY47_RS10575	PF02525	Flavodoxin-like fold
ATY47_RS10580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS10580	PF03466	LysR substrate binding domain
ATY47_RS10595	PF03377	TAL effector repeat
ATY47_RS10610	PF03377	TAL effector repeat
ATY47_RS10630	PF03377	TAL effector repeat
ATY47_RS10660	PF03079	ARD/ARD' family
ATY47_RS10665	PF00596	Class II Aldolase and Adducin N-terminal domain
ATY47_RS10670	PF13520	Amino acid permease
ATY47_RS10675	PF13520	Amino acid permease
ATY47_RS10685	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ATY47_RS10685	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ATY47_RS10690	PF01565	FAD binding domain 
ATY47_RS10690	PF02913	FAD linked oxidases, C-terminal domain
ATY47_RS10715	PF03918	Cytochrome C biogenesis protein
ATY47_RS10720	PF08534	Redoxin
ATY47_RS10725	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
ATY47_RS10725	PF01578	Cytochrome C assembly protein
ATY47_RS10730	PF03100	CcmE
ATY47_RS10740	PF01578	Cytochrome C assembly protein
ATY47_RS10745	PF03379	CcmB protein
ATY47_RS10750	PF00005	ABC transporter
ATY47_RS10755	PF00155	Aminotransferase class I and II
ATY47_RS10760	PF00795	Carbon-nitrogen hydrolase
ATY47_RS10780	PF01479	S4 domain
ATY47_RS10780	PF00849	RNA pseudouridylate synthase
ATY47_RS10785	PF04079	Segregation and condensation complex subunit ScpB
ATY47_RS10790	PF02616	Segregation and condensation protein ScpA
ATY47_RS10795	PF03795	YCII-related domain
ATY47_RS10805	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS10825	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS10830	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS10850	PF00795	Carbon-nitrogen hydrolase
ATY47_RS10860	PF04371	Porphyromonas-type peptidyl-arginine deiminase
ATY47_RS10870	PF00444	Ribosomal protein L36
ATY47_RS10875	PF02224	Cytidylate kinase
ATY47_RS10880	PF00575	S1 RNA binding domain
ATY47_RS10885	PF00216	Bacterial DNA-binding protein
ATY47_RS10895	PF18073	Rubredoxin metal binding domain
ATY47_RS10900	PF00953	Glycosyl transferase family 4
ATY47_RS10905	PF02719	Polysaccharide biosynthesis protein
ATY47_RS10910	PF00483	Nucleotidyl transferase
ATY47_RS10915	PF00999	Sodium/hydrogen exchanger family
ATY47_RS10915	PF02254	TrkA-N domain
ATY47_RS10940	PF05598	Transposase domain (DUF772)
ATY47_RS10950	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
ATY47_RS10950	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
ATY47_RS10955	PF00478	IMP dehydrogenase / GMP reductase domain
ATY47_RS10955	PF00571	CBS domain
ATY47_RS10960	PF02540	NAD synthase
ATY47_RS10960	PF00117	Glutamine amidotransferase class-I
ATY47_RS10960	PF00958	GMP synthase C terminal domain
ATY47_RS10965	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
ATY47_RS10970	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
ATY47_RS10970	PF00361	Proton-conducting membrane transporter
ATY47_RS10970	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
ATY47_RS10975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS10975	PF03466	LysR substrate binding domain
ATY47_RS11000	PF03601	Conserved hypothetical protein 698
ATY47_RS11005	PF03466	LysR substrate binding domain
ATY47_RS11005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS11020	PF01566	Natural resistance-associated macrophage protein
ATY47_RS11025	PF01325	Iron dependent repressor, N-terminal DNA binding domain
ATY47_RS11025	PF02742	Iron dependent repressor, metal binding and dimerisation domain
ATY47_RS11030	PF14437	MafB19-like deaminase
ATY47_RS11035	PF00929	Exonuclease
ATY47_RS11040	PF00924	Mechanosensitive ion channel
ATY47_RS11040	PF05552	Conserved TM helix
ATY47_RS11045	PF02896	PEP-utilising enzyme, TIM barrel domain
ATY47_RS11045	PF00391	PEP-utilising enzyme, mobile domain
ATY47_RS11045	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
ATY47_RS11050	PF03618	Kinase/pyrophosphorylase
ATY47_RS11085	PF01066	CDP-alcohol phosphatidyltransferase
ATY47_RS11095	PF00561	alpha/beta hydrolase fold
ATY47_RS11110	PF01266	FAD dependent oxidoreductase
ATY47_RS11110	PF00355	Rieske [2Fe-2S] domain
ATY47_RS11120	PF17674	HHH domain
ATY47_RS11120	PF00575	S1 RNA binding domain
ATY47_RS11120	PF16921	Tex protein YqgF-like domain
ATY47_RS11120	PF09371	Tex-like protein N-terminal domain
ATY47_RS11135	PF00072	Response regulator receiver domain
ATY47_RS11145	PF04551	GcpE protein
ATY47_RS11150	PF01569	PAP2 superfamily
ATY47_RS11165	PF07690	Major Facilitator Superfamily
ATY47_RS11175	PF01177	Asp/Glu/Hydantoin racemase
ATY47_RS11180	PF00892	EamA-like transporter family
ATY47_RS11185	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
ATY47_RS11185	PF01565	FAD binding domain 
ATY47_RS11190	PF01180	Dihydroorotate dehydrogenase
ATY47_RS11205	PF00171	Aldehyde dehydrogenase family
ATY47_RS11215	PF03073	TspO/MBR family
ATY47_RS11220	PF03447	Homoserine dehydrogenase, NAD binding domain
ATY47_RS11220	PF00742	Homoserine dehydrogenase
ATY47_RS11220	PF00696	Amino acid kinase family
ATY47_RS11220	PF01842	ACT domain
ATY47_RS11220	PF13840	ACT domain 
ATY47_RS11225	PF08544	GHMP kinases C terminal 
ATY47_RS11225	PF00288	GHMP kinases N terminal domain
ATY47_RS11240	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS11240	PF14821	Threonine synthase N terminus
ATY47_RS11250	PF00027	Cyclic nucleotide-binding domain
ATY47_RS11250	PF13545	Crp-like helix-turn-helix domain
ATY47_RS11255	PF03129	Anticodon binding domain
ATY47_RS11255	PF13393	Histidyl-tRNA synthetase
ATY47_RS11275	PF01634	ATP phosphoribosyltransferase
ATY47_RS11275	PF08029	HisG, C-terminal domain
ATY47_RS11280	PF00815	Histidinol dehydrogenase
ATY47_RS11285	PF00155	Aminotransferase class I and II
ATY47_RS11290	PF00475	Imidazoleglycerol-phosphate dehydratase
ATY47_RS11295	PF00117	Glutamine amidotransferase class-I
ATY47_RS11300	PF00977	Histidine biosynthesis protein
ATY47_RS11305	PF00977	Histidine biosynthesis protein
ATY47_RS11310	PF01502	Phosphoribosyl-AMP cyclohydrolase
ATY47_RS11310	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
ATY47_RS11320	PF03377	TAL effector repeat
ATY47_RS11335	PF03377	TAL effector repeat
ATY47_RS11430	PF02303	Helix-destabilising protein
ATY47_RS11460	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS11470	PF01609	Transposase DDE domain
ATY47_RS11470	PF05598	Transposase domain (DUF772)
ATY47_RS11485	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS11495	PF03377	TAL effector repeat
ATY47_RS11515	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS11535	PF03377	TAL effector repeat
ATY47_RS11560	PF01609	Transposase DDE domain
ATY47_RS11560	PF05598	Transposase domain (DUF772)
ATY47_RS11575	PF00872	Transposase, Mutator family
ATY47_RS11585	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ATY47_RS11605	PF01066	CDP-alcohol phosphatidyltransferase
ATY47_RS11610	PF01541	GIY-YIG catalytic domain
ATY47_RS11610	PF02151	UvrB/uvrC motif
ATY47_RS11610	PF08459	UvrC Helix-hairpin-helix N-terminal
ATY47_RS11620	PF01451	Low molecular weight phosphotyrosine protein phosphatase
ATY47_RS11625	PF02348	Cytidylyltransferase
ATY47_RS11630	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
ATY47_RS11635	PF00664	ABC transporter transmembrane region
ATY47_RS11635	PF00005	ABC transporter
ATY47_RS11645	PF01618	MotA/TolQ/ExbB proton channel family
ATY47_RS11650	PF00753	Metallo-beta-lactamase superfamily
ATY47_RS11650	PF03772	Competence protein
ATY47_RS11665	PF00005	ABC transporter
ATY47_RS11670	PF12704	MacB-like periplasmic core domain
ATY47_RS11670	PF02687	FtsX-like permease family
ATY47_RS11680	PF03937	Flavinator of succinate dehydrogenase
ATY47_RS11685	PF13085	2Fe-2S iron-sulfur cluster binding domain
ATY47_RS11695	PF02910	Fumarate reductase flavoprotein C-term
ATY47_RS11695	PF00890	FAD binding domain
ATY47_RS11700	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
ATY47_RS11705	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
ATY47_RS11710	PF01571	Aminomethyltransferase folate-binding domain
ATY47_RS11720	PF00005	ABC transporter
ATY47_RS11720	PF17912	MalK OB fold domain
ATY47_RS11725	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
ATY47_RS11725	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
ATY47_RS11730	PF02685	Glucokinase
ATY47_RS11735	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
ATY47_RS11740	PF00920	Dehydratase family
ATY47_RS11745	PF01081	KDPG and KHG aldolase
ATY47_RS11750	PF05598	Transposase domain (DUF772)
ATY47_RS11780	PF00072	Response regulator receiver domain
ATY47_RS11780	PF01627	Hpt domain
ATY47_RS11780	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS11780	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
ATY47_RS11780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS11780	PF00672	HAMP domain
ATY47_RS11790	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS11810	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS11840	PF02253	Phospholipase A1
ATY47_RS11855	PF05683	Fumarase C-terminus
ATY47_RS11855	PF05681	Fumarate hydratase (Fumerase)
ATY47_RS11860	PF00005	ABC transporter
ATY47_RS11865	PF00175	Oxidoreductase NAD-binding domain 
ATY47_RS11865	PF00970	Oxidoreductase FAD-binding domain
ATY47_RS11870	PF00255	Glutathione peroxidase
ATY47_RS11890	PF00082	Subtilase family
ATY47_RS11895	PF08281	Sigma-70, region 4
ATY47_RS11895	PF04542	Sigma-70 region 2 
ATY47_RS11905	PF12802	MarR family
ATY47_RS11930	PF00854	POT family
ATY47_RS11940	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS11940	PF14310	Fibronectin type III-like domain
ATY47_RS11940	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ATY47_RS11955	PF00563	EAL domain
ATY47_RS11955	PF00360	Phytochrome region
ATY47_RS11955	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS11955	PF01590	GAF domain
ATY47_RS11965	PF00474	Sodium:solute symporter family
ATY47_RS11970	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ATY47_RS11970	PF14310	Fibronectin type III-like domain
ATY47_RS11970	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS11990	PF00342	Phosphoglucose isomerase
ATY47_RS11995	PF02261	Aspartate decarboxylase
ATY47_RS12000	PF02569	Pantoate-beta-alanine ligase
ATY47_RS12005	PF02548	Ketopantoate hydroxymethyltransferase
ATY47_RS12010	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
ATY47_RS12015	PF12627	Probable RNA and SrmB- binding site of polymerase A
ATY47_RS12015	PF12626	Polymerase A arginine-rich C-terminus
ATY47_RS12015	PF01743	Poly A polymerase head domain
ATY47_RS12025	PF02649	Type I GTP cyclohydrolase folE2
ATY47_RS12030	PF01520	N-acetylmuramoyl-L-alanine amidase
ATY47_RS12045	PF01527	Transposase
ATY47_RS12050	PF13276	HTH-like domain
ATY47_RS12055	PF05598	Transposase domain (DUF772)
ATY47_RS12060	PF00082	Subtilase family
ATY47_RS12060	PF03797	Autotransporter beta-domain
ATY47_RS12065	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS12070	PF00873	AcrB/AcrD/AcrF family
ATY47_RS12075	PF02321	Outer membrane efflux protein
ATY47_RS12080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS12080	PF13426	PAS domain
ATY47_RS12080	PF08448	PAS fold
ATY47_RS12080	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS12080	PF00072	Response regulator receiver domain
ATY47_RS12085	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS12085	PF00072	Response regulator receiver domain
ATY47_RS12090	PF12951	Passenger-associated-transport-repeat
ATY47_RS12095	PF01527	Transposase
ATY47_RS12105	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
ATY47_RS12110	PF01817	Chorismate mutase type II
ATY47_RS12110	PF00800	Prephenate dehydratase
ATY47_RS12110	PF01842	ACT domain
ATY47_RS12115	PF00266	Aminotransferase class-V
ATY47_RS12120	PF00174	Oxidoreductase molybdopterin binding domain
ATY47_RS12125	PF01794	Ferric reductase like transmembrane component
ATY47_RS12150	PF00392	Bacterial regulatory proteins, gntR family
ATY47_RS12150	PF07702	UTRA domain
ATY47_RS12160	PF07969	Amidohydrolase family
ATY47_RS12165	PF00221	Aromatic amino acid lyase
ATY47_RS12175	PF01175	Urocanase Rossmann-like domain
ATY47_RS12175	PF17391	Urocanase N-terminal domain
ATY47_RS12175	PF17392	Urocanase C-terminal domain
ATY47_RS12190	PF13276	HTH-like domain
ATY47_RS12195	PF01527	Transposase
ATY47_RS12200	PF03989	DNA gyrase C-terminal domain, beta-propeller
ATY47_RS12200	PF00521	DNA gyrase/topoisomerase IV, subunit A
ATY47_RS12205	PF01008	Initiation factor 2 subunit family
ATY47_RS12220	PF00152	tRNA synthetases class II (D, K and N) 
ATY47_RS12225	PF00533	BRCA1 C Terminus (BRCT) domain
ATY47_RS12225	PF01653	NAD-dependent DNA ligase adenylation domain
ATY47_RS12225	PF03120	NAD-dependent DNA ligase OB-fold domain
ATY47_RS12225	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
ATY47_RS12225	PF12826	Helix-hairpin-helix motif
ATY47_RS12235	PF04354	ZipA, C-terminal FtsZ-binding domain
ATY47_RS12240	PF02463	RecF/RecN/SMC N terminal domain
ATY47_RS12245	PF01281	Ribosomal protein L9, N-terminal domain
ATY47_RS12245	PF03948	Ribosomal protein L9, C-terminal domain
ATY47_RS12250	PF01084	Ribosomal protein S18
ATY47_RS12255	PF01250	Ribosomal protein S6
ATY47_RS12260	PF01521	Iron-sulphur cluster biosynthesis
ATY47_RS12265	PF00152	tRNA synthetases class II (D, K and N) 
ATY47_RS12265	PF01336	OB-fold nucleic acid binding domain
ATY47_RS12295	PF00484	Carbonic anhydrase
ATY47_RS12300	PF06052	3-hydroxyanthranilic acid dioxygenase
ATY47_RS12310	PF00266	Aminotransferase class-V
ATY47_RS12315	PF01494	FAD binding domain
ATY47_RS12320	PF08411	Exonuclease C-terminal
ATY47_RS12320	PF00929	Exonuclease
ATY47_RS12330	PF00248	Aldo/keto reductase family
ATY47_RS12345	PF01513	ATP-NAD kinase
ATY47_RS12355	PF02926	THUMP domain
ATY47_RS12355	PF10672	S-adenosylmethionine-dependent methyltransferase
ATY47_RS12355	PF01170	Putative RNA methylase family UPF0020
ATY47_RS12360	PF12848	ABC transporter
ATY47_RS12360	PF00005	ABC transporter
ATY47_RS12365	PF00005	ABC transporter
ATY47_RS12370	PF00005	ABC transporter
ATY47_RS12400	PF00581	Rhodanese-like domain
ATY47_RS12405	PF00293	NUDIX domain
ATY47_RS12410	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATY47_RS12410	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
ATY47_RS12415	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS12425	PF10576	Iron-sulfur binding domain of endonuclease III
ATY47_RS12425	PF00730	HhH-GPD superfamily base excision DNA repair protein
ATY47_RS12425	PF00633	Helix-hairpin-helix motif
ATY47_RS12435	PF00484	Carbonic anhydrase
ATY47_RS12440	PF05598	Transposase domain (DUF772)
ATY47_RS12440	PF01609	Transposase DDE domain
ATY47_RS12455	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS12470	PF12849	PBP superfamily domain
ATY47_RS12475	PF12849	PBP superfamily domain
ATY47_RS12480	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS12485	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS12490	PF00005	ABC transporter
ATY47_RS12495	PF01895	PhoU domain
ATY47_RS12505	PF00929	Exonuclease
ATY47_RS12520	PF00872	Transposase, Mutator family
ATY47_RS12545	PF13495	Phage integrase, N-terminal SAM-like domain
ATY47_RS12545	PF00589	Phage integrase family
ATY47_RS12550	PF07549	SecD/SecF GG Motif
ATY47_RS12550	PF02355	Protein export membrane protein
ATY47_RS12555	PF13721	SecD export protein N-terminal TM region
ATY47_RS12555	PF02355	Protein export membrane protein
ATY47_RS12555	PF07549	SecD/SecF GG Motif
ATY47_RS12560	PF02699	Preprotein translocase subunit
ATY47_RS12565	PF01702	Queuine tRNA-ribosyltransferase
ATY47_RS12570	PF02547	Queuosine biosynthesis protein
ATY47_RS12605	PF05598	Transposase domain (DUF772)
ATY47_RS12640	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS12660	PF00037	4Fe-4S binding domain
ATY47_RS12675	PF01467	Cytidylyltransferase-like
ATY47_RS12685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS12685	PF00183	Hsp90 protein
ATY47_RS12705	PF00899	ThiF family
ATY47_RS12715	PF05598	Transposase domain (DUF772)
ATY47_RS12735	PF00665	Integrase core domain
ATY47_RS12735	PF13936	Helix-turn-helix domain
ATY47_RS12740	PF05598	Transposase domain (DUF772)
ATY47_RS12740	PF01609	Transposase DDE domain
ATY47_RS12780	PF03454	MoeA C-terminal region (domain IV)
ATY47_RS12780	PF00994	Probable molybdopterin binding domain
ATY47_RS12780	PF03453	MoeA N-terminal region (domain I and II)
ATY47_RS12785	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
ATY47_RS12785	PF01926	50S ribosome-binding GTPase
ATY47_RS12790	PF13360	PQQ-like domain
ATY47_RS12790	PF01011	PQQ enzyme repeat
ATY47_RS12800	PF13464	Domain of unknown function (DUF4115)
ATY47_RS12810	PF04055	Radical SAM superfamily
ATY47_RS12815	PF00334	Nucleoside diphosphate kinase
ATY47_RS12825	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
ATY47_RS12825	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS12825	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ATY47_RS12830	PF00108	Thiolase, N-terminal domain
ATY47_RS12830	PF02803	Thiolase, C-terminal domain
ATY47_RS12835	PF00654	Voltage gated chloride channel
ATY47_RS12845	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
ATY47_RS12855	PF12002	MgsA AAA+ ATPase C terminal
ATY47_RS12855	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS12855	PF16193	AAA C-terminal domain
ATY47_RS12865	PF03548	Outer membrane lipoprotein carrier protein LolA
ATY47_RS12875	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
ATY47_RS12875	PF09397	Ftsk gamma domain
ATY47_RS12875	PF01580	FtsK/SpoIIIE family
ATY47_RS12875	PF17854	FtsK alpha domain
ATY47_RS12880	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS12900	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
ATY47_RS12905	PF01176	Translation initiation factor 1A / IF-1
ATY47_RS12910	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS12910	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS12910	PF17871	AAA lid domain
ATY47_RS12910	PF02861	Clp amino terminal domain, pathogenicity island component
ATY47_RS12910	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS12915	PF02617	ATP-dependent Clp protease adaptor protein ClpS
ATY47_RS12920	PF00293	NUDIX domain
ATY47_RS12930	PF04356	Protein of unknown function (DUF489)
ATY47_RS12935	PF12729	Four helix bundle sensory module for signal transduction
ATY47_RS12935	PF00672	HAMP domain
ATY47_RS12935	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS12950	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS12950	PF00563	EAL domain
ATY47_RS12950	PF08448	PAS fold
ATY47_RS12950	PF08447	PAS fold
ATY47_RS12955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS12955	PF07730	Histidine kinase
ATY47_RS12960	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS12960	PF00563	EAL domain
ATY47_RS12960	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS12965	PF13426	PAS domain
ATY47_RS12965	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS12965	PF00989	PAS fold
ATY47_RS12965	PF13188	PAS domain
ATY47_RS12965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS12985	PF00072	Response regulator receiver domain
ATY47_RS12985	PF01584	CheW-like domain
ATY47_RS12995	PF00460	Flagella basal body rod protein
ATY47_RS12995	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATY47_RS13000	PF03963	Flagellar hook capping protein - N-terminal region
ATY47_RS13005	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATY47_RS13005	PF00460	Flagella basal body rod protein
ATY47_RS13005	PF07559	Flagellar basal body protein FlaE
ATY47_RS13010	PF00460	Flagella basal body rod protein
ATY47_RS13010	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATY47_RS13015	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATY47_RS13015	PF00460	Flagella basal body rod protein
ATY47_RS13020	PF02107	Flagellar L-ring protein
ATY47_RS13025	PF02119	Flagellar P-ring protein
ATY47_RS13030	PF10135	Rod binding protein
ATY47_RS13030	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
ATY47_RS13035	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATY47_RS13035	PF07196	Flagellin hook IN motif
ATY47_RS13045	PF00669	Bacterial flagellin N-terminal helical region
ATY47_RS13045	PF00700	Bacterial flagellin C-terminal helical region
ATY47_RS13050	PF07196	Flagellin hook IN motif
ATY47_RS13050	PF07195	Flagellar hook-associated protein 2 C-terminus
ATY47_RS13050	PF02465	Flagellar hook-associated protein 2 N-terminus
ATY47_RS13055	PF02561	Flagellar protein FliS
ATY47_RS13070	PF00072	Response regulator receiver domain
ATY47_RS13070	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS13075	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
ATY47_RS13075	PF04963	Sigma-54 factor, core binding domain
ATY47_RS13075	PF04552	Sigma-54, DNA binding domain
ATY47_RS13080	PF01339	CheB methylesterase
ATY47_RS13080	PF00072	Response regulator receiver domain
ATY47_RS13085	PF06490	Flagellar regulatory protein FleQ
ATY47_RS13085	PF00158	Sigma-54 interaction domain
ATY47_RS13085	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS13090	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
ATY47_RS13100	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
ATY47_RS13100	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ATY47_RS13135	PF00534	Glycosyl transferases group 1
ATY47_RS13135	PF00535	Glycosyl transferase family 2
ATY47_RS13140	PF02049	Flagellar hook-basal body complex protein FliE
ATY47_RS13145	PF01514	Secretory protein of YscJ/FliF family
ATY47_RS13145	PF08345	Flagellar M-ring protein C-terminal
ATY47_RS13150	PF01706	FliG C-terminal domain
ATY47_RS13150	PF14841	FliG middle domain
ATY47_RS13150	PF14842	FliG N-terminal domain
ATY47_RS13160	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATY47_RS13160	PF18269	T3SS EscN ATPase C-terminal domain
ATY47_RS13180	PF02154	Flagellar motor switch protein FliM
ATY47_RS13180	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
ATY47_RS13185	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
ATY47_RS13190	PF04347	Flagellar biosynthesis protein, FliO
ATY47_RS13195	PF00813	FliP family
ATY47_RS13200	PF01313	Bacterial export proteins, family 3
ATY47_RS13205	PF01311	Bacterial export proteins, family 1
ATY47_RS13210	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS13215	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS13220	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS13220	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS13220	PF00563	EAL domain
ATY47_RS13225	PF01312	FlhB HrpN YscU SpaS Family
ATY47_RS13230	PF00771	FHIPEP family
ATY47_RS13235	PF00448	SRP54-type protein, GTPase domain
ATY47_RS13240	PF10609	NUBPL iron-transfer P-loop NTPase
ATY47_RS13245	PF04539	Sigma-70 region 3
ATY47_RS13245	PF04545	Sigma-70, region 4
ATY47_RS13245	PF04542	Sigma-70 region 2 
ATY47_RS13250	PF00072	Response regulator receiver domain
ATY47_RS13255	PF04344	Chemotaxis phosphatase, CheZ
ATY47_RS13260	PF00072	Response regulator receiver domain
ATY47_RS13260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS13260	PF02895	Signal transducing histidine kinase, homodimeric domain
ATY47_RS13260	PF01584	CheW-like domain
ATY47_RS13260	PF01627	Hpt domain
ATY47_RS13275	PF00665	Integrase core domain
ATY47_RS13275	PF13936	Helix-turn-helix domain
ATY47_RS13290	PF01609	Transposase DDE domain
ATY47_RS13290	PF05598	Transposase domain (DUF772)
ATY47_RS13295	PF03527	RHS protein
ATY47_RS13295	PF05593	RHS Repeat
ATY47_RS13305	PF01609	Transposase DDE domain
ATY47_RS13305	PF05598	Transposase domain (DUF772)
ATY47_RS13315	PF01609	Transposase DDE domain
ATY47_RS13315	PF05598	Transposase domain (DUF772)
ATY47_RS13340	PF00873	AcrB/AcrD/AcrF family
ATY47_RS13360	PF00034	Cytochrome c
ATY47_RS13410	PF01609	Transposase DDE domain
ATY47_RS13410	PF05598	Transposase domain (DUF772)
ATY47_RS13415	PF00005	ABC transporter
ATY47_RS13415	PF00664	ABC transporter transmembrane region
ATY47_RS13420	PF00664	ABC transporter transmembrane region
ATY47_RS13420	PF00005	ABC transporter
ATY47_RS13425	PF01654	Cytochrome bd terminal oxidase subunit I
ATY47_RS13430	PF01654	Cytochrome bd terminal oxidase subunit I
ATY47_RS13435	PF02322	Cytochrome bd terminal oxidase subunit II
ATY47_RS13455	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
ATY47_RS13455	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
ATY47_RS13460	PF00171	Aldehyde dehydrogenase family
ATY47_RS13465	PF01472	PUA domain
ATY47_RS13465	PF00696	Amino acid kinase family
ATY47_RS13480	PF00206	Lyase
ATY47_RS13485	PF01118	Semialdehyde dehydrogenase, NAD binding domain
ATY47_RS13495	PF04768	NAT, N-acetyltransferase, of N-acetylglutamate synthase
ATY47_RS13495	PF00696	Amino acid kinase family
ATY47_RS13500	PF07687	Peptidase dimerisation domain
ATY47_RS13500	PF01546	Peptidase family M20/M25/M40
ATY47_RS13510	PF00764	Arginosuccinate synthase
ATY47_RS13515	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
ATY47_RS13515	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
ATY47_RS13525	PF09190	DALR domain
ATY47_RS13525	PF01406	tRNA synthetases class I (C) catalytic domain
ATY47_RS13530	PF02657	Fe-S metabolism associated domain
ATY47_RS13545	PF01258	Prokaryotic dksA/traR C4-type zinc finger
ATY47_RS13555	PF01809	Putative membrane protein insertion efficiency factor
ATY47_RS13560	PF01979	Amidohydrolase family
ATY47_RS13565	PF08460	Bacterial SH3 domain
ATY47_RS13565	PF01551	Peptidase family M23
ATY47_RS13570	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
ATY47_RS13575	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS13600	PF01609	Transposase DDE domain
ATY47_RS13600	PF05598	Transposase domain (DUF772)
ATY47_RS13610	PF01095	Pectinesterase
ATY47_RS13630	PF00295	Glycosyl hydrolases family 28
ATY47_RS13640	PF13419	Haloacid dehalogenase-like hydrolase
ATY47_RS13650	PF01979	Amidohydrolase family
ATY47_RS13660	PF09285	Elongation factor P, C-terminal
ATY47_RS13660	PF01132	Elongation factor P (EF-P) OB domain
ATY47_RS13660	PF08207	Elongation factor P (EF-P) KOW-like domain
ATY47_RS13665	PF04055	Radical SAM superfamily
ATY47_RS13670	PF13188	PAS domain
ATY47_RS13670	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS13670	PF00563	EAL domain
ATY47_RS13670	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS13680	PF00588	SpoU rRNA Methylase family
ATY47_RS13685	PF00459	Inositol monophosphatase family
ATY47_RS13690	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
ATY47_RS13690	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
ATY47_RS13695	PF00545	ribonuclease
ATY47_RS13715	PF16326	ABC transporter C-terminal domain
ATY47_RS13715	PF00005	ABC transporter
ATY47_RS13715	PF12848	ABC transporter
ATY47_RS13720	PF00271	Helicase conserved C-terminal domain
ATY47_RS13720	PF00270	DEAD/DEAH box helicase
ATY47_RS13720	PF03880	DbpA RNA binding domain   
ATY47_RS13725	PF00156	Phosphoribosyl transferase domain
ATY47_RS13730	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
ATY47_RS13740	PF14497	Glutathione S-transferase, C-terminal domain
ATY47_RS13740	PF02798	Glutathione S-transferase, N-terminal domain
ATY47_RS13745	PF00313	'Cold-shock' DNA-binding domain
ATY47_RS13750	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
ATY47_RS13755	PF07152	YaeQ protein
ATY47_RS13765	PF00563	EAL domain
ATY47_RS13765	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS13765	PF00072	Response regulator receiver domain
ATY47_RS13770	PF01435	Peptidase family M48
ATY47_RS13775	PF00749	tRNA synthetases class I (E and Q), catalytic domain
ATY47_RS13780	PF00106	short chain dehydrogenase
ATY47_RS13785	PF05233	PHB accumulation regulatory domain
ATY47_RS13785	PF07879	PHB/PHA accumulation regulator DNA-binding domain
ATY47_RS13800	PF01119	DNA mismatch repair protein, C-terminal domain
ATY47_RS13800	PF08676	MutL C terminal dimerisation domain
ATY47_RS13805	PF11741	AMIN domain
ATY47_RS13805	PF01520	N-acetylmuramoyl-L-alanine amidase
ATY47_RS13810	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
ATY47_RS13815	PF03853	YjeF-related protein N-terminus
ATY47_RS13815	PF01256	Carbohydrate kinase
ATY47_RS13820	PF08331	Domain of unknown function (DUF1730)
ATY47_RS13830	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS13835	PF02601	Exonuclease VII, large subunit
ATY47_RS13835	PF13742	OB-fold nucleic acid binding domain
ATY47_RS13850	PF03781	Sulfatase-modifying factor enzyme 1
ATY47_RS13860	PF00570	HRDC domain
ATY47_RS13860	PF01612	3'-5' exonuclease
ATY47_RS13865	PF04679	ATP dependent DNA ligase C terminal region        
ATY47_RS13865	PF01068	ATP dependent DNA ligase domain
ATY47_RS13865	PF13298	DNA polymerase Ligase (LigD)
ATY47_RS13900	PF00171	Aldehyde dehydrogenase family
ATY47_RS13900	PF01619	Proline dehydrogenase
ATY47_RS13900	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
ATY47_RS13900	PF14850	DNA-binding domain of Proline dehydrogenase
ATY47_RS13905	PF00872	Transposase, Mutator family
ATY47_RS13935	PF04386	Stringent starvation protein B
ATY47_RS13940	PF00043	Glutathione S-transferase, C-terminal domain
ATY47_RS13940	PF02798	Glutathione S-transferase, N-terminal domain
ATY47_RS13945	PF02167	Cytochrome C1 family
ATY47_RS13950	PF00032	Cytochrome b(C-terminal)/b6/petD
ATY47_RS13950	PF00033	Cytochrome b/b6/petB
ATY47_RS13955	PF00355	Rieske [2Fe-2S] domain
ATY47_RS13955	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
ATY47_RS13960	PF01464	Transglycosylase SLT domain
ATY47_RS13985	PF04055	Radical SAM superfamily
ATY47_RS13985	PF01938	TRAM domain
ATY47_RS13985	PF00919	Uncharacterized protein family UPF0004
ATY47_RS13990	PF02562	PhoH-like protein
ATY47_RS14000	PF02130	Uncharacterized protein family UPF0054
ATY47_RS14010	PF03471	Transporter associated domain
ATY47_RS14010	PF00571	CBS domain
ATY47_RS14025	PF00171	Aldehyde dehydrogenase family
ATY47_RS14035	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS14040	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS14045	PF08402	TOBE domain
ATY47_RS14045	PF00005	ABC transporter
ATY47_RS14050	PF02321	Outer membrane efflux protein
ATY47_RS14055	PF07690	Major Facilitator Superfamily
ATY47_RS14060	PF13533	Biotin-lipoyl like
ATY47_RS14070	PF00120	Glutamine synthetase, catalytic domain
ATY47_RS14080	PF00120	Glutamine synthetase, catalytic domain
ATY47_RS14085	PF01266	FAD dependent oxidoreductase
ATY47_RS14090	PF00072	Response regulator receiver domain
ATY47_RS14090	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS14095	PF07690	Major Facilitator Superfamily
ATY47_RS14095	PF00083	Sugar (and other) transporter
ATY47_RS14105	PF00384	Molybdopterin oxidoreductase
ATY47_RS14110	PF02634	FdhD/NarQ family
ATY47_RS14115	PF07690	Major Facilitator Superfamily
ATY47_RS14125	PF00202	Aminotransferase class-III
ATY47_RS14130	PF00005	ABC transporter
ATY47_RS14140	PF04286	Protein of unknown function (DUF445)
ATY47_RS14145	PF00672	HAMP domain
ATY47_RS14145	PF00072	Response regulator receiver domain
ATY47_RS14145	PF01627	Hpt domain
ATY47_RS14145	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
ATY47_RS14145	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS14145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS14150	PF00072	Response regulator receiver domain
ATY47_RS14155	PF01609	Transposase DDE domain
ATY47_RS14155	PF05598	Transposase domain (DUF772)
ATY47_RS14160	PF05088	Bacterial NAD-glutamate dehydrogenase
ATY47_RS14170	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS14170	PF00529	HlyD membrane-fusion protein of T1SS
ATY47_RS14175	PF00873	AcrB/AcrD/AcrF family
ATY47_RS14180	PF13006	Insertion element 4 transposase N-terminal
ATY47_RS14180	PF01609	Transposase DDE domain
ATY47_RS14190	PF13006	Insertion element 4 transposase N-terminal
ATY47_RS14190	PF01609	Transposase DDE domain
ATY47_RS14195	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS14200	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
ATY47_RS14200	PF05524	PEP-utilising enzyme, N-terminal
ATY47_RS14200	PF00381	PTS HPr component phosphorylation site
ATY47_RS14200	PF02896	PEP-utilising enzyme, TIM barrel domain
ATY47_RS14200	PF00391	PEP-utilising enzyme, mobile domain
ATY47_RS14205	PF00294	pfkB family carbohydrate kinase
ATY47_RS14210	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
ATY47_RS14225	PF01609	Transposase DDE domain
ATY47_RS14225	PF05598	Transposase domain (DUF772)
ATY47_RS14285	PF03377	TAL effector repeat
ATY47_RS14290	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS14300	PF13276	HTH-like domain
ATY47_RS14300	PF00665	Integrase core domain
ATY47_RS14300	PF13333	Integrase core domain
ATY47_RS14310	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS14350	PF00593	TonB dependent receptor
ATY47_RS14350	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS14360	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
ATY47_RS14360	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
ATY47_RS14380	PF01618	MotA/TolQ/ExbB proton channel family
ATY47_RS14385	PF00691	OmpA family
ATY47_RS14385	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
ATY47_RS14390	PF13614	AAA domain
ATY47_RS14395	PF01584	CheW-like domain
ATY47_RS14405	PF00072	Response regulator receiver domain
ATY47_RS14410	PF01627	Hpt domain
ATY47_RS14410	PF01584	CheW-like domain
ATY47_RS14410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS14410	PF09078	CheY binding
ATY47_RS14410	PF02895	Signal transducing histidine kinase, homodimeric domain
ATY47_RS14435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14435	PF02203	Tar ligand binding domain homologue
ATY47_RS14435	PF00672	HAMP domain
ATY47_RS14445	PF00672	HAMP domain
ATY47_RS14445	PF02203	Tar ligand binding domain homologue
ATY47_RS14445	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14455	PF00672	HAMP domain
ATY47_RS14455	PF02203	Tar ligand binding domain homologue
ATY47_RS14455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14460	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14460	PF00672	HAMP domain
ATY47_RS14460	PF02203	Tar ligand binding domain homologue
ATY47_RS14465	PF00672	HAMP domain
ATY47_RS14465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14465	PF02203	Tar ligand binding domain homologue
ATY47_RS14470	PF02203	Tar ligand binding domain homologue
ATY47_RS14470	PF00672	HAMP domain
ATY47_RS14470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14480	PF07238	PilZ domain
ATY47_RS14480	PF07317	Flagellar regulator YcgR
ATY47_RS14485	PF01584	CheW-like domain
ATY47_RS14505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS14505	PF00672	HAMP domain
ATY47_RS14505	PF02203	Tar ligand binding domain homologue
ATY47_RS14510	PF03705	CheR methyltransferase, all-alpha domain
ATY47_RS14510	PF01739	CheR methyltransferase, SAM binding domain
ATY47_RS14515	PF03975	CheD chemotactic sensory transduction
ATY47_RS14520	PF00072	Response regulator receiver domain
ATY47_RS14520	PF01339	CheB methylesterase
ATY47_RS14525	PF00563	EAL domain
ATY47_RS14525	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS14525	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS14535	PF00561	alpha/beta hydrolase fold
ATY47_RS14540	PF06434	Aconitate hydratase 2 N-terminus
ATY47_RS14540	PF11791	Aconitate B N-terminal domain
ATY47_RS14540	PF00330	Aconitase family (aconitate hydratase)
ATY47_RS14555	PF00694	Aconitase C-terminal domain
ATY47_RS14555	PF00330	Aconitase family (aconitate hydratase)
ATY47_RS14565	PF00501	AMP-binding enzyme
ATY47_RS14565	PF13193	AMP-binding enzyme C-terminal domain
ATY47_RS14570	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS14575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS14575	PF01627	Hpt domain
ATY47_RS14575	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS14575	PF00072	Response regulator receiver domain
ATY47_RS14585	PF00072	Response regulator receiver domain
ATY47_RS14590	PF01336	OB-fold nucleic acid binding domain
ATY47_RS14590	PF00152	tRNA synthetases class II (D, K and N) 
ATY47_RS14595	PF03462	PCRF domain
ATY47_RS14595	PF00472	RF-1 domain
ATY47_RS14610	PF14690	zinc-finger of transposase IS204/IS1001/IS1096/IS1165
ATY47_RS14610	PF13542	Helix-turn-helix domain of transposase family ISL3
ATY47_RS14610	PF01610	Transposase
ATY47_RS14625	PF01368	DHH family
ATY47_RS14625	PF17768	RecJ OB domain
ATY47_RS14625	PF02272	DHHA1 domain
ATY47_RS14635	PF01272	Transcription elongation factor, GreA/GreB, C-term
ATY47_RS14635	PF03449	Transcription elongation factor, N-terminal
ATY47_RS14640	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATY47_RS14640	PF02142	MGS-like domain
ATY47_RS14640	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATY47_RS14650	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
ATY47_RS14650	PF00117	Glutamine amidotransferase class-I
ATY47_RS14655	PF05173	Dihydrodipicolinate reductase, C-terminus
ATY47_RS14655	PF01113	Dihydrodipicolinate reductase, N-terminus
ATY47_RS14665	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS14670	PF03473	MOSC domain
ATY47_RS14670	PF03475	3-alpha domain
ATY47_RS14675	PF00155	Aminotransferase class I and II
ATY47_RS14695	PF07664	Ferrous iron transport protein B C terminus
ATY47_RS14695	PF02421	Ferrous iron transport protein B
ATY47_RS14695	PF07670	Nucleoside recognition
ATY47_RS14705	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS14715	PF00682	HMGL-like
ATY47_RS14720	PF00106	short chain dehydrogenase
ATY47_RS14725	PF09285	Elongation factor P, C-terminal
ATY47_RS14725	PF08207	Elongation factor P (EF-P) KOW-like domain
ATY47_RS14725	PF01132	Elongation factor P (EF-P) OB domain
ATY47_RS14740	PF13936	Helix-turn-helix domain
ATY47_RS14740	PF00665	Integrase core domain
ATY47_RS14750	PF00083	Sugar (and other) transporter
ATY47_RS14760	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
ATY47_RS14760	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
ATY47_RS14775	PF16338	Domain of unknown function (DUF4968)
ATY47_RS14775	PF01055	Glycosyl hydrolases family 31 
ATY47_RS14775	PF17137	Domain of unknown function (DUF5110)
ATY47_RS14785	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS14785	PF03466	LysR substrate binding domain
ATY47_RS14790	PF01081	KDPG and KHG aldolase
ATY47_RS14795	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
ATY47_RS14795	PF13378	Enolase C-terminal domain-like
ATY47_RS14800	PF08450	SMP-30/Gluconolactonase/LRE-like region
ATY47_RS14805	PF05035	2-keto-3-deoxy-galactonokinase
ATY47_RS14810	PF11953	Domain of unknown function (DUF3470)
ATY47_RS14810	PF00037	4Fe-4S binding domain
ATY47_RS14820	PF00701	Dihydrodipicolinate synthetase family
ATY47_RS14835	PF00578	AhpC/TSA family
ATY47_RS14840	PF02562	PhoH-like protein
ATY47_RS14840	PF13638	PIN domain
ATY47_RS14850	PF08543	Phosphomethylpyrimidine kinase
ATY47_RS14880	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS14880	PF03466	LysR substrate binding domain
ATY47_RS14885	PF17954	Quercetinase C-terminal cupin domain
ATY47_RS14885	PF02678	Pirin
ATY47_RS14910	PF03796	DnaB-like helicase C terminal domain
ATY47_RS14910	PF00772	DnaB-like helicase N terminal domain
ATY47_RS14930	PF02599	Global regulator protein family
ATY47_RS14935	PF02272	DHHA1 domain
ATY47_RS14935	PF01411	tRNA synthetases class II (A)
ATY47_RS14935	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
ATY47_RS14940	PF02631	RecX family
ATY47_RS14945	PF00154	recA bacterial DNA recombination protein
ATY47_RS14950	PF00717	Peptidase S24-like
ATY47_RS14950	PF01726	LexA DNA binding domain
ATY47_RS14955	PF03109	ABC1 family
ATY47_RS14960	PF02464	Competence-damaged protein
ATY47_RS14965	PF13167	GTP-binding GTPase N-terminal
ATY47_RS14965	PF16360	GTP-binding GTPase Middle Region
ATY47_RS14965	PF01926	50S ribosome-binding GTPase
ATY47_RS14970	PF17209	Hfq protein
ATY47_RS14980	PF00809	Pterin binding enzyme
ATY47_RS14985	PF06480	FtsH Extracellular
ATY47_RS14985	PF17862	AAA+ lid domain
ATY47_RS14985	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS14985	PF01434	Peptidase family M41
ATY47_RS14990	PF01728	FtsJ-like methyltransferase
ATY47_RS14995	PF01985	CRS1 / YhbY (CRM) domain
ATY47_RS15005	PF01476	LysM domain
ATY47_RS15005	PF01551	Peptidase family M23
ATY47_RS15010	PF09335	SNARE associated Golgi protein
ATY47_RS15020	PF01975	Survival protein SurE
ATY47_RS15025	PF01713	Smr domain
ATY47_RS15030	PF01142	tRNA pseudouridine synthase D (TruD)
ATY47_RS15035	PF02542	YgbB family
ATY47_RS15045	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
ATY47_RS15050	PF04977	Septum formation initiator
ATY47_RS15055	PF03952	Enolase, N-terminal domain
ATY47_RS15055	PF00113	Enolase, C-terminal TIM barrel domain
ATY47_RS15065	PF00793	DAHP synthetase I family
ATY47_RS15070	PF06418	CTP synthase N-terminus
ATY47_RS15070	PF00117	Glutamine amidotransferase class-I
ATY47_RS15080	PF00986	DNA gyrase B subunit, carboxyl terminus
ATY47_RS15080	PF01751	Toprim domain
ATY47_RS15080	PF00204	DNA gyrase B
ATY47_RS15080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS15095	PF02698	DUF218 domain
ATY47_RS15100	PF01384	Phosphate transporter family
ATY47_RS15110	PF00571	CBS domain
ATY47_RS15110	PF01595	Cyclin M transmembrane N-terminal domain
ATY47_RS15110	PF03471	Transporter associated domain
ATY47_RS15125	PF00296	Luciferase-like monooxygenase
ATY47_RS15135	PF07690	Major Facilitator Superfamily
ATY47_RS15145	PF00664	ABC transporter transmembrane region
ATY47_RS15145	PF00005	ABC transporter
ATY47_RS15150	PF00005	ABC transporter
ATY47_RS15170	PF13579	Glycosyl transferase 4-like domain
ATY47_RS15170	PF00534	Glycosyl transferases group 1
ATY47_RS15190	PF08241	Methyltransferase domain
ATY47_RS15205	PF00535	Glycosyl transferase family 2
ATY47_RS15210	PF01943	Polysaccharide biosynthesis protein
ATY47_RS15215	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
ATY47_RS15235	PF05523	WxcM-like, C-terminal 
ATY47_RS15250	PF00034	Cytochrome c
ATY47_RS15260	PF08281	Sigma-70, region 4
ATY47_RS15260	PF04542	Sigma-70 region 2 
ATY47_RS15270	PF00082	Subtilase family
ATY47_RS15275	PF01578	Cytochrome C assembly protein
ATY47_RS15280	PF04995	Heme exporter protein D (CcmD)
ATY47_RS15285	PF03100	CcmE
ATY47_RS15290	PF01578	Cytochrome C assembly protein
ATY47_RS15290	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
ATY47_RS15295	PF08534	Redoxin
ATY47_RS15300	PF03918	Cytochrome C biogenesis protein
ATY47_RS15310	PF03377	TAL effector repeat
ATY47_RS15325	PF03377	TAL effector repeat
ATY47_RS15340	PF03377	TAL effector repeat
ATY47_RS15345	PF00873	AcrB/AcrD/AcrF family
ATY47_RS15355	PF00873	AcrB/AcrD/AcrF family
ATY47_RS15360	PF00529	HlyD membrane-fusion protein of T1SS
ATY47_RS15360	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS15390	PF01527	Transposase
ATY47_RS15395	PF13276	HTH-like domain
ATY47_RS15405	PF13700	Domain of unknown function (DUF4158)
ATY47_RS15405	PF01526	Tn3 transposase DDE domain
ATY47_RS15410	PF00072	Response regulator receiver domain
ATY47_RS15410	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS15415	PF03150	Di-haem cytochrome c peroxidase
ATY47_RS15415	PF00034	Cytochrome c
ATY47_RS15420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS15420	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS15425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS15425	PF03466	LysR substrate binding domain
ATY47_RS15430	PF06812	ImpA, N-terminal, type VI secretion system
ATY47_RS15455	PF00069	Protein kinase domain
ATY47_RS15470	PF14331	ImcF-related N-terminal domain
ATY47_RS15470	PF06744	Type VI secretion protein IcmF C-terminal
ATY47_RS15470	PF06761	Intracellular multiplication and human macrophage-killing
ATY47_RS15480	PF05936	Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 
ATY47_RS15495	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS15495	PF06715	Gp5 C-terminal repeat (3 copies)
ATY47_RS15505	PF05598	Transposase domain (DUF772)
ATY47_RS15505	PF01609	Transposase DDE domain
ATY47_RS15515	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS15515	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS15515	PF17871	AAA lid domain
ATY47_RS15515	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS15525	PF05947	Type VI secretion system, TssF
ATY47_RS15530	PF04965	Gene 25-like lysozyme
ATY47_RS15535	PF07024	ImpE protein
ATY47_RS15540	PF05638	Type VI secretion system effector, Hcp
ATY47_RS15550	PF05591	Type VI secretion system, VipA, VC_A0107 or Hcp2
ATY47_RS15560	PF01609	Transposase DDE domain
ATY47_RS15560	PF05598	Transposase domain (DUF772)
ATY47_RS15575	PF05598	Transposase domain (DUF772)
ATY47_RS15575	PF01609	Transposase DDE domain
ATY47_RS15605	PF13683	Integrase core domain
ATY47_RS15605	PF13276	HTH-like domain
ATY47_RS15615	PF01106	NifU-like domain
ATY47_RS15620	PF01329	Pterin 4 alpha carbinolamine dehydratase
ATY47_RS15630	PF02535	ZIP Zinc transporter
ATY47_RS15635	PF02535	ZIP Zinc transporter
ATY47_RS15640	PF11737	Protein of unknown function (DUF3300)
ATY47_RS15645	PF00849	RNA pseudouridylate synthase
ATY47_RS15645	PF01479	S4 domain
ATY47_RS15650	PF10150	Ribonuclease E/G family
ATY47_RS15650	PF12111	Polyribonucleotide phosphorylase C terminal
ATY47_RS15650	PF00575	S1 RNA binding domain
ATY47_RS15665	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS15670	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS15670	PF00072	Response regulator receiver domain
ATY47_RS15675	PF17773	UPF0176 acylphosphatase like domain
ATY47_RS15675	PF00581	Rhodanese-like domain
ATY47_RS15680	PF05598	Transposase domain (DUF772)
ATY47_RS15680	PF01609	Transposase DDE domain
ATY47_RS15690	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATY47_RS15700	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
ATY47_RS15700	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
ATY47_RS15700	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
ATY47_RS15710	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
ATY47_RS15710	PF01648	4'-phosphopantetheinyl transferase superfamily
ATY47_RS15740	PF01609	Transposase DDE domain
ATY47_RS15740	PF05598	Transposase domain (DUF772)
ATY47_RS15770	PF03861	ANTAR domain
ATY47_RS15770	PF00072	Response regulator receiver domain
ATY47_RS15780	PF14824	Sirohaem biosynthesis protein central
ATY47_RS15780	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATY47_RS15780	PF10414	Sirohaem synthase dimerisation region
ATY47_RS15805	PF12804	MobA-like NTP transferase domain
ATY47_RS15810	PF03453	MoeA N-terminal region (domain I and II)
ATY47_RS15810	PF00994	Probable molybdopterin binding domain
ATY47_RS15810	PF03454	MoeA C-terminal region (domain IV)
ATY47_RS15870	PF00593	TonB dependent receptor
ATY47_RS15870	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS15890	PF04616	Glycosyl hydrolases family 43
ATY47_RS15895	PF07532	Bacterial Ig-like domain (group 4)
ATY47_RS15900	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS15900	PF00593	TonB dependent receptor
ATY47_RS15910	PF09286	Pro-kumamolisin, activation domain 
ATY47_RS15910	PF00082	Subtilase family
ATY47_RS15955	PF13520	Amino acid permease
ATY47_RS15970	PF00557	Metallopeptidase family M24
ATY47_RS15970	PF01321	Creatinase/Prolidase N-terminal domain
ATY47_RS15975	PF00171	Aldehyde dehydrogenase family
ATY47_RS15980	PF00701	Dihydrodipicolinate synthetase family
ATY47_RS15985	PF04324	BFD-like [2Fe-2S] binding domain
ATY47_RS15985	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS15995	PF01266	FAD dependent oxidoreductase
ATY47_RS16000	PF05544	Proline racemase
ATY47_RS16010	PF02881	SRP54-type protein, helical bundle domain
ATY47_RS16010	PF00448	SRP54-type protein, GTPase domain
ATY47_RS16025	PF14815	NUDIX domain
ATY47_RS16025	PF00633	Helix-hairpin-helix motif
ATY47_RS16025	PF00730	HhH-GPD superfamily base excision DNA repair protein
ATY47_RS16030	PF04362	Bacterial Fe(2+) trafficking
ATY47_RS16035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS16035	PF13426	PAS domain
ATY47_RS16035	PF00072	Response regulator receiver domain
ATY47_RS16045	PF05598	Transposase domain (DUF772)
ATY47_RS16145	PF03808	Glycosyl transferase WecB/TagA/CpsF family
ATY47_RS16160	PF14667	Polysaccharide biosynthesis C-terminal domain
ATY47_RS16170	PF00534	Glycosyl transferases group 1
ATY47_RS16170	PF13439	Glycosyltransferase Family 4
ATY47_RS16190	PF02397	Bacterial sugar transferase
ATY47_RS16210	PF13411	MerR HTH family regulatory protein
ATY47_RS16215	PF00216	Bacterial DNA-binding protein
ATY47_RS16220	PF01588	Putative tRNA binding domain
ATY47_RS16220	PF03147	Ferredoxin-fold anticodon binding domain
ATY47_RS16220	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
ATY47_RS16220	PF03484	tRNA synthetase B5 domain
ATY47_RS16220	PF03483	B3/4 domain
ATY47_RS16225	PF01409	tRNA synthetases class II core domain (F)
ATY47_RS16225	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
ATY47_RS16230	PF00453	Ribosomal protein L20
ATY47_RS16235	PF01632	Ribosomal protein L35
ATY47_RS16240	PF00707	Translation initiation factor IF-3, C-terminal domain
ATY47_RS16240	PF05198	Translation initiation factor IF-3, N-terminal domain
ATY47_RS16245	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATY47_RS16245	PF03129	Anticodon binding domain
ATY47_RS16245	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
ATY47_RS16245	PF02824	TGS domain
ATY47_RS16255	PF01527	Transposase
ATY47_RS16275	PF00271	Helicase conserved C-terminal domain
ATY47_RS16275	PF17757	UvrB interaction domain
ATY47_RS16275	PF12344	Ultra-violet resistance protein B
ATY47_RS16275	PF02151	UvrB/uvrC motif
ATY47_RS16275	PF04851	Type III restriction enzyme, res subunit
ATY47_RS16280	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS16280	PF00114	Pilin (bacterial filament)
ATY47_RS16290	PF16732	Type IV minor pilin ComP, DNA uptake sequence receptor
ATY47_RS16290	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS16295	PF05567	Neisseria PilC beta-propeller domain
ATY47_RS16315	PF12019	Type II transport protein GspH
ATY47_RS16315	PF07963	Prokaryotic N-terminal methylation motif
ATY47_RS16320	PF14793	Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases
ATY47_RS16320	PF03641	Possible lysine decarboxylase
ATY47_RS16320	PF11892	Domain of unknown function (DUF3412)
ATY47_RS16325	PF00593	TonB dependent receptor
ATY47_RS16335	PF01914	MarC family integral membrane protein
ATY47_RS16345	PF00462	Glutaredoxin
ATY47_RS16350	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
ATY47_RS16350	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
ATY47_RS16355	PF02222	ATP-grasp domain
ATY47_RS16355	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
ATY47_RS16360	PF00731	AIR carboxylase
ATY47_RS16370	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
ATY47_RS16370	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
ATY47_RS16380	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
ATY47_RS16380	PF00013	KH domain
ATY47_RS16380	PF01138	3' exoribonuclease family, domain 1
ATY47_RS16380	PF03725	3' exoribonuclease family, domain 2
ATY47_RS16380	PF00575	S1 RNA binding domain
ATY47_RS16385	PF00312	Ribosomal protein S15
ATY47_RS16390	PF16198	tRNA pseudouridylate synthase B C-terminal domain
ATY47_RS16390	PF09157	Pseudouridine synthase II TruB, C-terminal
ATY47_RS16390	PF01509	TruB family pseudouridylate synthase (N terminal domain)
ATY47_RS16395	PF02033	Ribosome-binding factor A
ATY47_RS16400	PF11987	Translation-initiation factor 2
ATY47_RS16400	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS16400	PF08364	Bacterial translation initiation factor IF-2 associated region
ATY47_RS16400	PF04760	Translation initiation factor IF-2, N-terminal region
ATY47_RS16405	PF08529	NusA N-terminal domain
ATY47_RS16405	PF00575	S1 RNA binding domain
ATY47_RS16405	PF13184	NusA-like KH domain
ATY47_RS16410	PF02576	RimP N-terminal domain
ATY47_RS16410	PF17384	RimP C-terminal SH3 domain
ATY47_RS16420	PF00361	Proton-conducting membrane transporter
ATY47_RS16425	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
ATY47_RS16425	PF00361	Proton-conducting membrane transporter
ATY47_RS16430	PF00361	Proton-conducting membrane transporter
ATY47_RS16430	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
ATY47_RS16435	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
ATY47_RS16440	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
ATY47_RS16445	PF12838	4Fe-4S dicluster domain
ATY47_RS16450	PF00146	NADH dehydrogenase
ATY47_RS16455	PF00384	Molybdopterin oxidoreductase
ATY47_RS16455	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ATY47_RS16455	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
ATY47_RS16460	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
ATY47_RS16460	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ATY47_RS16460	PF10531	SLBB domain
ATY47_RS16470	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
ATY47_RS16475	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
ATY47_RS16480	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
ATY47_RS16485	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
ATY47_RS16500	PF00121	Triosephosphate isomerase
ATY47_RS16525	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS16535	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS16535	PF00563	EAL domain
ATY47_RS16535	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS16550	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
ATY47_RS16550	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
ATY47_RS16550	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
ATY47_RS16550	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ATY47_RS16555	PF01039	Carboxyl transferase domain
ATY47_RS16555	PF17848	Acetyl-coA carboxylase zinc finger domain
ATY47_RS16560	PF00290	Tryptophan synthase alpha chain
ATY47_RS16570	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS16575	PF03466	LysR substrate binding domain
ATY47_RS16575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS16580	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
ATY47_RS16585	PF01416	tRNA pseudouridine synthase
ATY47_RS16605	PF02774	Semialdehyde dehydrogenase, dimerisation domain
ATY47_RS16605	PF01118	Semialdehyde dehydrogenase, NAD binding domain
ATY47_RS16610	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ATY47_RS16610	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ATY47_RS16615	PF01264	Chorismate synthase
ATY47_RS16620	PF05175	Methyltransferase small domain
ATY47_RS16625	PF02630	SCO1/SenC
ATY47_RS16630	PF02666	Phosphatidylserine decarboxylase
ATY47_RS16645	PF05872	Bacterial protein of unknown function (DUF853)
ATY47_RS16650	PF13936	Helix-turn-helix domain
ATY47_RS16650	PF00665	Integrase core domain
ATY47_RS16665	PF01272	Transcription elongation factor, GreA/GreB, C-term
ATY47_RS16665	PF03449	Transcription elongation factor, N-terminal
ATY47_RS16670	PF18693	TRAM domain
ATY47_RS16670	PF00919	Uncharacterized protein family UPF0004
ATY47_RS16670	PF04055	Radical SAM superfamily
ATY47_RS16675	PF01738	Dienelactone hydrolase family
ATY47_RS16690	PF00692	dUTPase
ATY47_RS16695	PF10609	NUBPL iron-transfer P-loop NTPase
ATY47_RS16730	PF01266	FAD dependent oxidoreductase
ATY47_RS16735	PF04235	Protein of unknown function (DUF418)
ATY47_RS16740	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATY47_RS16745	PF00877	NlpC/P60 family
ATY47_RS16750	PF00877	NlpC/P60 family
ATY47_RS16765	PF00375	Sodium:dicarboxylate symporter family
ATY47_RS16770	PF00245	Alkaline phosphatase
ATY47_RS16775	PF11734	TilS substrate C-terminal domain
ATY47_RS16775	PF01171	PP-loop family
ATY47_RS16775	PF09179	TilS substrate binding domain
ATY47_RS16780	PF02609	Exonuclease VII small subunit
ATY47_RS16785	PF00348	Polyprenyl synthetase
ATY47_RS16805	PF01523	Putative modulator of DNA gyrase
ATY47_RS16810	PF04751	Protein of unknown function (DUF615)
ATY47_RS16815	PF01523	Putative modulator of DNA gyrase
ATY47_RS16820	PF13502	AsmA-like C-terminal region
ATY47_RS16820	PF13116	Protein of unknown function
ATY47_RS16825	PF10150	Ribonuclease E/G family
ATY47_RS16825	PF00575	S1 RNA binding domain
ATY47_RS16830	PF02545	Maf-like protein
ATY47_RS16835	PF04402	Protein of unknown function (DUF541)
ATY47_RS16860	PF02590	Predicted SPOUT methyltransferase
ATY47_RS16880	PF01467	Cytidylyltransferase-like
ATY47_RS16895	PF13603	Leucyl-tRNA synthetase, Domain 2
ATY47_RS16895	PF00133	tRNA synthetases class I (I, L, M and V)
ATY47_RS16895	PF08264	Anticodon-binding domain of tRNA
ATY47_RS16905	PF00085	Thioredoxin
ATY47_RS16920	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS16970	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS16980	PF00128	Alpha amylase, catalytic domain
ATY47_RS16980	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ATY47_RS16985	PF05598	Transposase domain (DUF772)
ATY47_RS16985	PF01609	Transposase DDE domain
ATY47_RS16990	PF01609	Transposase DDE domain
ATY47_RS16990	PF05598	Transposase domain (DUF772)
ATY47_RS17010	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS17015	PF13936	Helix-turn-helix domain
ATY47_RS17015	PF00665	Integrase core domain
ATY47_RS17040	PF13276	HTH-like domain
ATY47_RS17040	PF13683	Integrase core domain
ATY47_RS17050	PF01527	Transposase
ATY47_RS17075	PF00657	GDSL-like Lipase/Acylhydrolase
ATY47_RS17075	PF03797	Autotransporter beta-domain
ATY47_RS17085	PF05690	Thiazole biosynthesis protein ThiG
ATY47_RS17090	PF02390	Putative methyltransferase 
ATY47_RS17095	PF03600	Citrate transporter
ATY47_RS17095	PF02080	TrkA-C domain
ATY47_RS17110	PF05598	Transposase domain (DUF772)
ATY47_RS17125	PF00665	Integrase core domain
ATY47_RS17125	PF13936	Helix-turn-helix domain
ATY47_RS17130	PF01557	Fumarylacetoacetate (FAA) hydrolase family
ATY47_RS17135	PF01741	Large-conductance mechanosensitive channel, MscL
ATY47_RS17150	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS17160	PF00135	Carboxylesterase family
ATY47_RS17165	PF08032	RNA 2'-O ribose methyltransferase substrate binding
ATY47_RS17165	PF00588	SpoU rRNA Methylase family
ATY47_RS17195	PF01433	Peptidase family M1 domain
ATY47_RS17195	PF11838	ERAP1-like C-terminal domain
ATY47_RS17200	PF00873	AcrB/AcrD/AcrF family
ATY47_RS17205	PF00529	HlyD membrane-fusion protein of T1SS
ATY47_RS17205	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS17210	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS17215	PF01507	Phosphoadenosine phosphosulfate reductase family
ATY47_RS17220	PF00667	FAD binding domain
ATY47_RS17220	PF00258	Flavodoxin
ATY47_RS17220	PF00175	Oxidoreductase NAD-binding domain 
ATY47_RS17225	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
ATY47_RS17225	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
ATY47_RS17230	PF01507	Phosphoadenosine phosphosulfate reductase family
ATY47_RS17250	PF01627	Hpt domain
ATY47_RS17250	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS17250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS17250	PF00672	HAMP domain
ATY47_RS17250	PF00072	Response regulator receiver domain
ATY47_RS17275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS17275	PF03466	LysR substrate binding domain
ATY47_RS17280	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATY47_RS17280	PF10414	Sirohaem synthase dimerisation region
ATY47_RS17280	PF14824	Sirohaem biosynthesis protein central
ATY47_RS17285	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS17300	PF01661	Macro domain
ATY47_RS17305	PF00274	Fructose-bisphosphate aldolase class-I
ATY47_RS17310	PF02887	Pyruvate kinase, alpha/beta domain
ATY47_RS17310	PF00224	Pyruvate kinase, barrel domain
ATY47_RS17315	PF13419	Haloacid dehalogenase-like hydrolase
ATY47_RS17320	PF00162	Phosphoglycerate kinase
ATY47_RS17350	PF06628	Catalase-related immune-responsive
ATY47_RS17350	PF00199	Catalase
ATY47_RS17350	PF18011	C-terminal domain found in long catalases
ATY47_RS17370	PF01609	Transposase DDE domain
ATY47_RS17370	PF05598	Transposase domain (DUF772)
ATY47_RS17390	PF12833	Helix-turn-helix domain
ATY47_RS17390	PF02311	AraC-like ligand binding domain
ATY47_RS17410	PF05598	Transposase domain (DUF772)
ATY47_RS17425	PF00326	Prolyl oligopeptidase family
ATY47_RS17425	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
ATY47_RS17425	PF07676	WD40-like Beta Propeller Repeat
ATY47_RS17450	PF05598	Transposase domain (DUF772)
ATY47_RS17450	PF01609	Transposase DDE domain
ATY47_RS17455	PF03169	OPT oligopeptide transporter protein
ATY47_RS17470	PF07733	Bacterial DNA polymerase III alpha NTPase domain
ATY47_RS17470	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
ATY47_RS17470	PF14579	Helix-hairpin-helix motif
ATY47_RS17470	PF02811	PHP domain
ATY47_RS17485	PF01726	LexA DNA binding domain
ATY47_RS17485	PF00717	Peptidase S24-like
ATY47_RS17515	PF13456	Reverse transcriptase-like
ATY47_RS17515	PF00300	Histidine phosphatase superfamily (branch 1)
ATY47_RS17555	PF11867	Domain of unknown function (DUF3387)
ATY47_RS17555	PF18766	SWI2/SNF2 ATPase
ATY47_RS17555	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
ATY47_RS17570	PF01420	Type I restriction modification DNA specificity domain
ATY47_RS17575	PF08780	Nucleotidyltransferase substrate binding protein like
ATY47_RS17580	PF02384	N-6 DNA Methylase
ATY47_RS17600	PF00271	Helicase conserved C-terminal domain
ATY47_RS17600	PF04851	Type III restriction enzyme, res subunit
ATY47_RS17600	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
ATY47_RS17600	PF08463	EcoEI R protein C-terminal
ATY47_RS17610	PF02384	N-6 DNA Methylase
ATY47_RS17615	PF01420	Type I restriction modification DNA specificity domain
ATY47_RS17675	PF06715	Gp5 C-terminal repeat (3 copies)
ATY47_RS17675	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17685	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS17685	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS17685	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS17685	PF17871	AAA lid domain
ATY47_RS17695	PF05947	Type VI secretion system, TssF
ATY47_RS17710	PF05943	Type VI secretion protein, EvpB/VC_A0108, tail sheath
ATY47_RS17715	PF05591	Type VI secretion system, VipA, VC_A0107 or Hcp2
ATY47_RS17740	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS17740	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17740	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS17745	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS17745	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17745	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS17750	PF00182	Chitinase class I
ATY47_RS17755	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17755	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS17755	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS17765	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17765	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS17765	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS17810	PF13296	Putative type VI secretion system Rhs element Vgr
ATY47_RS17810	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
ATY47_RS17810	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17835	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17840	PF03781	Sulfatase-modifying factor enzyme 1
ATY47_RS17845	PF05598	Transposase domain (DUF772)
ATY47_RS17845	PF01609	Transposase DDE domain
ATY47_RS17855	PF03781	Sulfatase-modifying factor enzyme 1
ATY47_RS17865	PF06715	Gp5 C-terminal repeat (3 copies)
ATY47_RS17865	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS17880	PF04972	BON domain
ATY47_RS17880	PF00691	OmpA family
ATY47_RS17890	PF06761	Intracellular multiplication and human macrophage-killing
ATY47_RS17890	PF06744	Type VI secretion protein IcmF C-terminal
ATY47_RS17890	PF14331	ImcF-related N-terminal domain
ATY47_RS17915	PF01527	Transposase
ATY47_RS17920	PF02222	ATP-grasp domain
ATY47_RS17945	PF00730	HhH-GPD superfamily base excision DNA repair protein
ATY47_RS17970	PF00072	Response regulator receiver domain
ATY47_RS17970	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS17975	PF07730	Histidine kinase
ATY47_RS17985	PF03775	Septum formation inhibitor MinC, C-terminal domain
ATY47_RS17985	PF05209	Septum formation inhibitor MinC, N-terminal domain
ATY47_RS17990	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
ATY47_RS17995	PF03776	Septum formation topological specificity factor MinE
ATY47_RS18005	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS18005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS18005	PF08521	Two-component sensor kinase N-terminal
ATY47_RS18010	PF00072	Response regulator receiver domain
ATY47_RS18010	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS18015	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
ATY47_RS18025	PF08019	Phosphoethanolamine transferase EptA/EptB
ATY47_RS18025	PF00884	Sulfatase
ATY47_RS18045	PF00664	ABC transporter transmembrane region
ATY47_RS18045	PF00005	ABC transporter
ATY47_RS18045	PF03412	Peptidase C39 family
ATY47_RS18065	PF02347	Glycine cleavage system P-protein
ATY47_RS18100	PF01527	Transposase
ATY47_RS18110	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS18125	PF01196	Ribosomal protein L17
ATY47_RS18130	PF01000	RNA polymerase Rpb3/RpoA insert domain
ATY47_RS18130	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
ATY47_RS18130	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
ATY47_RS18135	PF01479	S4 domain
ATY47_RS18135	PF00163	Ribosomal protein S4/S9 N-terminal domain
ATY47_RS18140	PF00411	Ribosomal protein S11
ATY47_RS18145	PF00416	Ribosomal protein S13/S18
ATY47_RS18150	PF00344	SecY translocase
ATY47_RS18155	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
ATY47_RS18160	PF00327	Ribosomal protein L30p/L7e
ATY47_RS18165	PF00333	Ribosomal protein S5, N-terminal domain
ATY47_RS18165	PF03719	Ribosomal protein S5, C-terminal domain
ATY47_RS18170	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
ATY47_RS18175	PF00347	Ribosomal protein L6
ATY47_RS18180	PF00410	Ribosomal protein S8
ATY47_RS18185	PF00253	Ribosomal protein S14p/S29e
ATY47_RS18190	PF00673	ribosomal L5P family C-terminus
ATY47_RS18190	PF00281	Ribosomal protein L5
ATY47_RS18195	PF00467	KOW motif
ATY47_RS18195	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
ATY47_RS18200	PF00238	Ribosomal protein L14p/L23e
ATY47_RS18205	PF00366	Ribosomal protein S17
ATY47_RS18210	PF00831	Ribosomal L29 protein
ATY47_RS18215	PF00252	Ribosomal protein L16p/L10e
ATY47_RS18220	PF07650	KH domain
ATY47_RS18220	PF00189	Ribosomal protein S3, C-terminal domain
ATY47_RS18225	PF00237	Ribosomal protein L22p/L17e
ATY47_RS18230	PF00203	Ribosomal protein S19
ATY47_RS18235	PF03947	Ribosomal Proteins L2, C-terminal domain
ATY47_RS18235	PF00181	Ribosomal Proteins L2, RNA binding domain
ATY47_RS18240	PF00276	Ribosomal protein L23
ATY47_RS18245	PF00573	Ribosomal protein L4/L1 family
ATY47_RS18250	PF00297	Ribosomal protein L3
ATY47_RS18255	PF00338	Ribosomal protein S10p/S20e
ATY47_RS18265	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS18265	PF03144	Elongation factor Tu domain 2
ATY47_RS18265	PF03143	Elongation factor Tu C-terminal domain
ATY47_RS18270	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS18270	PF03764	Elongation factor G, domain IV
ATY47_RS18270	PF14492	Elongation Factor G, domain II
ATY47_RS18270	PF03144	Elongation factor Tu domain 2
ATY47_RS18270	PF00679	Elongation factor G C-terminus
ATY47_RS18275	PF00177	Ribosomal protein S7p/S5e
ATY47_RS18280	PF00164	Ribosomal protein S12/S23
ATY47_RS18285	PF04983	RNA polymerase Rpb1, domain 3
ATY47_RS18285	PF04998	RNA polymerase Rpb1, domain 5
ATY47_RS18285	PF04997	RNA polymerase Rpb1, domain 1
ATY47_RS18285	PF00623	RNA polymerase Rpb1, domain 2
ATY47_RS18285	PF05000	RNA polymerase Rpb1, domain 4
ATY47_RS18290	PF10385	RNA polymerase beta subunit external 1 domain
ATY47_RS18290	PF00562	RNA polymerase Rpb2, domain 6
ATY47_RS18290	PF04561	RNA polymerase Rpb2, domain 2
ATY47_RS18290	PF04560	RNA polymerase Rpb2, domain 7
ATY47_RS18290	PF04565	RNA polymerase Rpb2, domain 3
ATY47_RS18290	PF04563	RNA polymerase beta subunit
ATY47_RS18295	PF00542	Ribosomal protein L7/L12 C-terminal domain
ATY47_RS18295	PF16320	Ribosomal protein L7/L12 dimerisation domain
ATY47_RS18300	PF00466	Ribosomal protein L10
ATY47_RS18305	PF00687	Ribosomal protein L1p/L10e family
ATY47_RS18310	PF03946	Ribosomal protein L11, N-terminal domain
ATY47_RS18310	PF00298	Ribosomal protein L11, RNA binding domain
ATY47_RS18315	PF00467	KOW motif
ATY47_RS18315	PF02357	Transcription termination factor nusG
ATY47_RS18320	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
ATY47_RS18330	PF00009	Elongation factor Tu GTP binding domain
ATY47_RS18330	PF03144	Elongation factor Tu domain 2
ATY47_RS18330	PF03143	Elongation factor Tu C-terminal domain
ATY47_RS18350	PF06071	Protein of unknown function (DUF933)
ATY47_RS18350	PF01926	50S ribosome-binding GTPase
ATY47_RS18355	PF01195	Peptidyl-tRNA hydrolase
ATY47_RS18360	PF14693	Ribosomal protein TL5, C-terminal domain
ATY47_RS18360	PF01386	Ribosomal L25p family
ATY47_RS18365	PF14572	Phosphoribosyl synthetase-associated domain
ATY47_RS18365	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
ATY47_RS18375	PF08544	GHMP kinases C terminal 
ATY47_RS18375	PF00288	GHMP kinases N terminal domain
ATY47_RS18380	PF03550	Outer membrane lipoprotein LolB
ATY47_RS18390	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
ATY47_RS18390	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
ATY47_RS18390	PF01488	Shikimate / quinate 5-dehydrogenase
ATY47_RS18395	PF03462	PCRF domain
ATY47_RS18395	PF00472	RF-1 domain
ATY47_RS18405	PF00994	Probable molybdopterin binding domain
ATY47_RS18410	PF03976	Polyphosphate kinase 2 (PPK2)
ATY47_RS18420	PF00708	Acylphosphatase
ATY47_RS18425	PF08534	Redoxin
ATY47_RS18430	PF03631	Virulence factor BrkB
ATY47_RS18435	PF03358	NADPH-dependent FMN reductase
ATY47_RS18450	PF02055	Glycosyl hydrolase family 30 TIM-barrel domain
ATY47_RS18450	PF17189	Glycosyl hydrolase family 30 beta sandwich domain
ATY47_RS18460	PF04073	Aminoacyl-tRNA editing domain
ATY47_RS18470	PF01063	Amino-transferase class IV
ATY47_RS18500	PF02233	NAD(P) transhydrogenase beta subunit
ATY47_RS18505	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
ATY47_RS18525	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
ATY47_RS18525	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
ATY47_RS18525	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
ATY47_RS18540	PF01367	5'-3' exonuclease, C-terminal SAM fold
ATY47_RS18540	PF00476	DNA polymerase family A
ATY47_RS18540	PF01612	3'-5' exonuclease
ATY47_RS18540	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
ATY47_RS18545	PF00293	NUDIX domain
ATY47_RS18555	PF00561	alpha/beta hydrolase fold
ATY47_RS18585	PF05175	Methyltransferase small domain
ATY47_RS18585	PF17827	PrmC N-terminal domain
ATY47_RS18590	PF00578	AhpC/TSA family
ATY47_RS18590	PF10417	C-terminal domain of 1-Cys peroxiredoxin
ATY47_RS18595	PF13192	Thioredoxin domain
ATY47_RS18595	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS18600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS18600	PF03466	LysR substrate binding domain
ATY47_RS18605	PF03449	Transcription elongation factor, N-terminal
ATY47_RS18605	PF01272	Transcription elongation factor, GreA/GreB, C-term
ATY47_RS18610	PF00923	Transaldolase/Fructose-6-phosphate aldolase
ATY47_RS18630	PF01625	Peptide methionine sulfoxide reductase
ATY47_RS18665	PF00462	Glutaredoxin
ATY47_RS18670	PF01435	Peptidase family M48
ATY47_RS18670	PF13181	Tetratricopeptide repeat
ATY47_RS18675	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS18675	PF00072	Response regulator receiver domain
ATY47_RS18680	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS18680	PF11808	Phosphate regulon sensor protein PhoR
ATY47_RS18680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS18680	PF00989	PAS fold
ATY47_RS18685	PF13090	Polyphosphate kinase C-terminal domain 2
ATY47_RS18685	PF13089	Polyphosphate kinase N-terminal domain
ATY47_RS18685	PF02503	Polyphosphate kinase middle domain
ATY47_RS18685	PF17941	Polyphosphate kinase C-terminal domain 1
ATY47_RS18690	PF02541	Ppx/GppA phosphatase family
ATY47_RS18700	PF01569	PAP2 superfamily
ATY47_RS18705	PF00149	Calcineurin-like phosphoesterase
ATY47_RS18720	PF04305	Protein of unknown function (DUF455)
ATY47_RS18725	PF00156	Phosphoribosyl transferase domain
ATY47_RS18740	PF08245	Mur ligase middle domain
ATY47_RS18740	PF02875	Mur ligase family, glutamate ligase domain
ATY47_RS18750	PF00300	Histidine phosphatase superfamily (branch 1)
ATY47_RS18755	PF10459	Peptidase S46
ATY47_RS18760	PF05506	Domain of unknown function (DUF756)
ATY47_RS18760	PF04185	Phosphoesterase family
ATY47_RS18770	PF00107	Zinc-binding dehydrogenase
ATY47_RS18770	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS18780	PF00005	ABC transporter
ATY47_RS18780	PF17850	CysA C-terminal regulatory domain
ATY47_RS18780	PF12857	TOBE-like domain
ATY47_RS18785	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS18790	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS18800	PF00155	Aminotransferase class I and II
ATY47_RS18810	PF00849	RNA pseudouridylate synthase
ATY47_RS18820	PF00691	OmpA family
ATY47_RS18820	PF05736	OprF membrane domain
ATY47_RS18825	PF00107	Zinc-binding dehydrogenase
ATY47_RS18825	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS18830	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS18830	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
ATY47_RS18840	PF01527	Transposase
ATY47_RS18870	PF17149	Periplasmic sensor domain found in signal transduction proteins
ATY47_RS18870	PF00072	Response regulator receiver domain
ATY47_RS18870	PF01627	Hpt domain
ATY47_RS18870	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS18870	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS18870	PF00672	HAMP domain
ATY47_RS18875	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS18875	PF00072	Response regulator receiver domain
ATY47_RS18895	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
ATY47_RS18895	PF00749	tRNA synthetases class I (E and Q), catalytic domain
ATY47_RS18905	PF13936	Helix-turn-helix domain
ATY47_RS18905	PF00665	Integrase core domain
ATY47_RS18915	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS18950	PF18125	RlmM ferredoxin-like domain
ATY47_RS18950	PF01728	FtsJ-like methyltransferase
ATY47_RS18955	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
ATY47_RS18955	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
ATY47_RS18960	PF08450	SMP-30/Gluconolactonase/LRE-like region
ATY47_RS18980	PF00378	Enoyl-CoA hydratase/isomerase
ATY47_RS18985	PF00171	Aldehyde dehydrogenase family
ATY47_RS18990	PF13193	AMP-binding enzyme C-terminal domain
ATY47_RS18990	PF00501	AMP-binding enzyme
ATY47_RS18995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS18995	PF03466	LysR substrate binding domain
ATY47_RS19005	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
ATY47_RS19035	PF01494	FAD binding domain
ATY47_RS19040	PF01494	FAD binding domain
ATY47_RS19050	PF01923	Cobalamin adenosyltransferase
ATY47_RS19055	PF00850	Histone deacetylase domain
ATY47_RS19060	PF03968	OstA-like protein
ATY47_RS19060	PF04453	LPS transport system D
ATY47_RS19065	PF09312	SurA N-terminal domain
ATY47_RS19065	PF00639	PPIC-type PPIASE domain
ATY47_RS19070	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
ATY47_RS19080	PF00398	Ribosomal RNA adenine dimethylase
ATY47_RS19085	PF04379	ApaG domain 
ATY47_RS19090	PF00149	Calcineurin-like phosphoesterase
ATY47_RS19095	PF00186	Dihydrofolate reductase
ATY47_RS19105	PF00303	Thymidylate synthase
ATY47_RS19110	PF01790	Prolipoprotein diacylglyceryl transferase
ATY47_RS19130	PF01219	Prokaryotic diacylglycerol kinase
ATY47_RS19145	PF08521	Two-component sensor kinase N-terminal
ATY47_RS19145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS19145	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS19150	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS19150	PF00072	Response regulator receiver domain
ATY47_RS19155	PF13472	GDSL-like Lipase/Acylhydrolase family
ATY47_RS19160	PF00005	ABC transporter
ATY47_RS19170	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
ATY47_RS19180	PF00005	ABC transporter
ATY47_RS19220	PF00248	Aldo/keto reductase family
ATY47_RS19230	PF01773	Na+ dependent nucleoside transporter N-terminus
ATY47_RS19230	PF07670	Nucleoside recognition
ATY47_RS19230	PF07662	Na+ dependent nucleoside transporter C-terminus
ATY47_RS19235	PF00294	pfkB family carbohydrate kinase
ATY47_RS19250	PF01207	Dihydrouridine synthase (Dus)
ATY47_RS19255	PF13649	Methyltransferase domain
ATY47_RS19265	PF02773	S-adenosylmethionine synthetase, C-terminal domain
ATY47_RS19265	PF00438	S-adenosylmethionine synthetase, N-terminal domain
ATY47_RS19265	PF02772	S-adenosylmethionine synthetase, central domain
ATY47_RS19275	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS19280	PF00328	Histidine phosphatase superfamily (branch 2)
ATY47_RS19300	PF00311	Phosphoenolpyruvate carboxylase
ATY47_RS19310	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ATY47_RS19310	PF05221	S-adenosyl-L-homocysteine hydrolase
ATY47_RS19315	PF13649	Methyltransferase domain
ATY47_RS19350	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
ATY47_RS19365	PF00082	Subtilase family
ATY47_RS19365	PF09286	Pro-kumamolisin, activation domain 
ATY47_RS19370	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS19370	PF14765	Polyketide synthase dehydratase
ATY47_RS19370	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATY47_RS19370	PF00698	Acyl transferase domain
ATY47_RS19370	PF00107	Zinc-binding dehydrogenase
ATY47_RS19370	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATY47_RS19370	PF08659	KR domain
ATY47_RS19370	PF00550	Phosphopantetheine attachment site
ATY47_RS19370	PF16197	Ketoacyl-synthetase C-terminal extension
ATY47_RS19380	PF02219	Methylenetetrahydrofolate reductase
ATY47_RS19395	PF00293	NUDIX domain
ATY47_RS19405	PF07517	SecA DEAD-like domain
ATY47_RS19405	PF07516	SecA Wing and Scaffold domain
ATY47_RS19405	PF01043	SecA preprotein cross-linking domain
ATY47_RS19405	PF02810	SEC-C motif
ATY47_RS19410	PF01551	Peptidase family M23
ATY47_RS19410	PF01476	LysM domain
ATY47_RS19420	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
ATY47_RS19425	PF00091	Tubulin/FtsZ family, GTPase domain
ATY47_RS19425	PF12327	FtsZ family, C-terminal domain
ATY47_RS19430	PF02491	SHS2 domain inserted in FTSA
ATY47_RS19435	PF08478	POTRA domain, FtsQ-type
ATY47_RS19435	PF03799	Cell division protein FtsQ
ATY47_RS19440	PF01820	D-ala D-ala ligase N-terminus
ATY47_RS19440	PF07478	D-ala D-ala ligase C-terminus
ATY47_RS19445	PF01225	Mur ligase family, catalytic domain
ATY47_RS19445	PF02875	Mur ligase family, glutamate ligase domain
ATY47_RS19445	PF08245	Mur ligase middle domain
ATY47_RS19450	PF04101	Glycosyltransferase family 28 C-terminal domain
ATY47_RS19450	PF03033	Glycosyltransferase family 28 N-terminal domain
ATY47_RS19455	PF01098	Cell cycle protein
ATY47_RS19460	PF00953	Glycosyl transferase family 4
ATY47_RS19465	PF01225	Mur ligase family, catalytic domain
ATY47_RS19465	PF08245	Mur ligase middle domain
ATY47_RS19465	PF02875	Mur ligase family, glutamate ligase domain
ATY47_RS19470	PF02875	Mur ligase family, glutamate ligase domain
ATY47_RS19470	PF08245	Mur ligase middle domain
ATY47_RS19470	PF01225	Mur ligase family, catalytic domain
ATY47_RS19475	PF03717	Penicillin-binding Protein dimerisation domain
ATY47_RS19475	PF00905	Penicillin binding protein transpeptidase domain
ATY47_RS19480	PF04999	Cell division protein FtsL
ATY47_RS19485	PF01795	MraW methylase family
ATY47_RS19490	PF02381	MraZ protein, putative antitoxin-like
ATY47_RS19510	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATY47_RS19520	PF02021	Uncharacterised protein family UPF0102
ATY47_RS19525	PF04307	LexA-binding, inner membrane-associated putative hydrolase
ATY47_RS19530	PF02913	FAD linked oxidases, C-terminal domain
ATY47_RS19530	PF01565	FAD binding domain 
ATY47_RS19535	PF00072	Response regulator receiver domain
ATY47_RS19535	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS19540	PF02702	Osmosensitive K+ channel His kinase sensor domain
ATY47_RS19540	PF13492	GAF domain
ATY47_RS19540	PF13493	Domain of unknown function (DUF4118)
ATY47_RS19540	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS19540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS19545	PF02669	K+-transporting ATPase, c chain
ATY47_RS19555	PF03814	Potassium-transporting ATPase A subunit
ATY47_RS19580	PF00586	AIR synthase related protein, N-terminal domain
ATY47_RS19580	PF02769	AIR synthase related protein, C-terminal domain
ATY47_RS19585	PF01029	NusB family
ATY47_RS19590	PF00885	6,7-dimethyl-8-ribityllumazine synthase
ATY47_RS19595	PF00925	GTP cyclohydrolase II
ATY47_RS19595	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
ATY47_RS19600	PF00677	Lumazine binding domain
ATY47_RS19610	PF01872	RibD C-terminal domain
ATY47_RS19610	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
ATY47_RS19620	PF03477	ATP cone domain
ATY47_RS19630	PF00464	Serine hydroxymethyltransferase
ATY47_RS19650	PF12848	ABC transporter
ATY47_RS19650	PF00005	ABC transporter
ATY47_RS19670	PF00756	Putative esterase
ATY47_RS19675	PF04828	Glutathione-dependent formaldehyde-activating enzyme
ATY47_RS19680	PF00107	Zinc-binding dehydrogenase
ATY47_RS19680	PF08240	Alcohol dehydrogenase GroES-like domain
ATY47_RS19685	PF02583	Metal-sensitive transcriptional repressor
ATY47_RS19695	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS19695	PF00072	Response regulator receiver domain
ATY47_RS19700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS19700	PF16527	Two-component sensor protein CpxA, periplasmic domain
ATY47_RS19700	PF00672	HAMP domain
ATY47_RS19700	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS19730	PF04107	Glutamate-cysteine ligase family 2(GCS2)
ATY47_RS19745	PF01926	50S ribosome-binding GTPase
ATY47_RS19750	PF00034	Cytochrome c
ATY47_RS19770	PF02028	BCCT, betaine/carnitine/choline family transporter
ATY47_RS19780	PF01527	Transposase
ATY47_RS19785	PF05598	Transposase domain (DUF772)
ATY47_RS19785	PF01609	Transposase DDE domain
ATY47_RS19790	PF00291	Pyridoxal-phosphate dependent enzyme
ATY47_RS19790	PF13291	ACT domain
ATY47_RS19795	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS19805	PF05598	Transposase domain (DUF772)
ATY47_RS19805	PF01609	Transposase DDE domain
ATY47_RS19810	PF01527	Transposase
ATY47_RS19830	PF12627	Probable RNA and SrmB- binding site of polymerase A
ATY47_RS19830	PF01966	HD domain
ATY47_RS19830	PF01743	Poly A polymerase head domain
ATY47_RS19845	PF05598	Transposase domain (DUF772)
ATY47_RS19845	PF01609	Transposase DDE domain
ATY47_RS19855	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS19895	PF01522	Polysaccharide deacetylase
ATY47_RS19895	PF14883	Hypothetical glycosyl hydrolase family 13
ATY47_RS19900	PF00535	Glycosyl transferase family 2
ATY47_RS19910	PF01979	Amidohydrolase family
ATY47_RS19915	PF01380	SIS domain
ATY47_RS19920	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS19925	PF07690	Major Facilitator Superfamily
ATY47_RS19930	PF07702	UTRA domain
ATY47_RS19930	PF00392	Bacterial regulatory proteins, gntR family
ATY47_RS19945	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
ATY47_RS19945	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
ATY47_RS19945	PF16355	Domain of unknown function (DUF4982)
ATY47_RS19945	PF00703	Glycosyl hydrolases family 2
ATY47_RS19945	PF02837	Glycosyl hydrolases family 2, sugar binding domain
ATY47_RS19980	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
ATY47_RS19985	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS19985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS19990	PF00072	Response regulator receiver domain
ATY47_RS19995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS19995	PF00360	Phytochrome region
ATY47_RS19995	PF01590	GAF domain
ATY47_RS19995	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS19995	PF08446	PAS fold
ATY47_RS20000	PF04972	BON domain
ATY47_RS20005	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
ATY47_RS20005	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
ATY47_RS20010	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
ATY47_RS20010	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
ATY47_RS20050	PF00293	NUDIX domain
ATY47_RS20050	PF01467	Cytidylyltransferase-like
ATY47_RS20060	PF17804	Tail specific protease N-terminal domain
ATY47_RS20060	PF03572	Peptidase family S41
ATY47_RS20060	PF00595	PDZ domain
ATY47_RS20060	PF11818	C-terminal domain of tail specific protease (DUF3340)
ATY47_RS20065	PF04055	Radical SAM superfamily
ATY47_RS20065	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
ATY47_RS20070	PF03099	Biotin/lipoate A/B protein ligase family
ATY47_RS20075	PF04359	Protein of unknown function (DUF493)
ATY47_RS20085	PF00768	D-alanyl-D-alanine carboxypeptidase
ATY47_RS20085	PF07943	Penicillin-binding protein 5, C-terminal domain
ATY47_RS20095	PF05036	Sporulation related domain
ATY47_RS20095	PF03330	Lytic transglycolase
ATY47_RS20100	PF13406	Transglycosylase SLT domain
ATY47_RS20125	PF04717	Type VI secretion system, phage-baseplate injector
ATY47_RS20135	PF01098	Cell cycle protein
ATY47_RS20140	PF03717	Penicillin-binding Protein dimerisation domain
ATY47_RS20140	PF00905	Penicillin binding protein transpeptidase domain
ATY47_RS20150	PF04085	rod shape-determining protein MreC
ATY47_RS20160	PF00294	pfkB family carbohydrate kinase
ATY47_RS20180	PF13673	Acetyltransferase (GNAT) domain
ATY47_RS20195	PF13533	Biotin-lipoyl like
ATY47_RS20205	PF01209	ubiE/COQ5 methyltransferase family
ATY47_RS20210	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS20210	PF08448	PAS fold
ATY47_RS20215	PF11838	ERAP1-like C-terminal domain
ATY47_RS20215	PF01433	Peptidase family M1 domain
ATY47_RS20230	PF00004	ATPase family associated with various cellular activities (AAA)
ATY47_RS20230	PF07724	AAA domain (Cdc48 subfamily)
ATY47_RS20230	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATY47_RS20235	PF00227	Proteasome subunit
ATY47_RS20245	PF00589	Phage integrase family
ATY47_RS20245	PF02899	Phage integrase, N-terminal SAM-like domain
ATY47_RS20270	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
ATY47_RS20270	PF00326	Prolyl oligopeptidase family
ATY47_RS20275	PF00155	Aminotransferase class I and II
ATY47_RS20290	PF00326	Prolyl oligopeptidase family
ATY47_RS20290	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
ATY47_RS20315	PF03900	Porphobilinogen deaminase, C-terminal domain
ATY47_RS20315	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
ATY47_RS20320	PF00072	Response regulator receiver domain
ATY47_RS20320	PF04397	LytTr DNA-binding domain
ATY47_RS20325	PF06580	Histidine kinase
ATY47_RS20325	PF07694	5TMR of 5TMR-LYT
ATY47_RS20335	PF13632	Glycosyl transferase family group 2
ATY47_RS20350	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS20360	PF00916	Sulfate permease family
ATY47_RS20360	PF01740	STAS domain
ATY47_RS20365	PF00553	Cellulose binding domain
ATY47_RS20365	PF00150	Cellulase (glycosyl hydrolase family 5)
ATY47_RS20375	PF00672	HAMP domain
ATY47_RS20375	PF02203	Tar ligand binding domain homologue
ATY47_RS20375	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATY47_RS20385	PF03707	Bacterial signalling protein N terminal repeat
ATY47_RS20385	PF00990	Diguanylate cyclase, GGDEF domain
ATY47_RS20385	PF00563	EAL domain
ATY47_RS20410	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS20425	PF01204	Trehalase
ATY47_RS20445	PF01544	CorA-like Mg2+ transporter protein
ATY47_RS20455	PF00324	Amino acid permease
ATY47_RS20460	PF01341	Glycosyl hydrolases family 6
ATY47_RS20460	PF00041	Fibronectin type III domain
ATY47_RS20460	PF00553	Cellulose binding domain
ATY47_RS20465	PF03330	Lytic transglycolase
ATY47_RS20470	PF00892	EamA-like transporter family
ATY47_RS20495	PF07759	Protein of unknown function (DUF1615)
ATY47_RS20540	PF00106	short chain dehydrogenase
ATY47_RS20555	PF01527	Transposase
ATY47_RS20565	PF00425	chorismate binding enzyme
ATY47_RS20565	PF04715	Anthranilate synthase component I, N terminal region
ATY47_RS20570	PF00781	Diacylglycerol kinase catalytic domain
ATY47_RS20575	PF00583	Acetyltransferase (GNAT) family
ATY47_RS20580	PF00834	Ribulose-phosphate 3 epimerase family
ATY47_RS20585	PF05099	Tellurite resistance protein TerB
ATY47_RS20585	PF00226	DnaJ domain
ATY47_RS20605	PF01483	Proprotein convertase P-domain
ATY47_RS20605	PF01447	Thermolysin metallopeptidase, catalytic domain
ATY47_RS20605	PF07504	Fungalysin/Thermolysin Propeptide Motif
ATY47_RS20605	PF02868	Thermolysin metallopeptidase, alpha-helical domain
ATY47_RS20610	PF07504	Fungalysin/Thermolysin Propeptide Motif
ATY47_RS20610	PF01483	Proprotein convertase P-domain
ATY47_RS20610	PF01447	Thermolysin metallopeptidase, catalytic domain
ATY47_RS20610	PF02868	Thermolysin metallopeptidase, alpha-helical domain
ATY47_RS20615	PF07504	Fungalysin/Thermolysin Propeptide Motif
ATY47_RS20615	PF03413	Peptidase propeptide and YPEB domain
ATY47_RS20615	PF01447	Thermolysin metallopeptidase, catalytic domain
ATY47_RS20615	PF02868	Thermolysin metallopeptidase, alpha-helical domain
ATY47_RS20630	PF00361	Proton-conducting membrane transporter
ATY47_RS20630	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
ATY47_RS20630	PF13244	Domain of unknown function (DUF4040)
ATY47_RS20630	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
ATY47_RS20635	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
ATY47_RS20640	PF00361	Proton-conducting membrane transporter
ATY47_RS20650	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
ATY47_RS20655	PF03334	Na+/H+ antiporter subunit
ATY47_RS20660	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS20670	PF05598	Transposase domain (DUF772)
ATY47_RS20670	PF01609	Transposase DDE domain
ATY47_RS20675	PF04209	homogentisate 1,2-dioxygenase
ATY47_RS20680	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ATY47_RS20685	PF01047	MarR family
ATY47_RS20695	PF00854	POT family
ATY47_RS20700	PF03301	Tryptophan 2,3-dioxygenase
ATY47_RS20710	PF00676	Dehydrogenase E1 component
ATY47_RS20715	PF02779	Transketolase, pyrimidine binding domain
ATY47_RS20715	PF02780	Transketolase, C-terminal domain
ATY47_RS20725	PF02779	Transketolase, pyrimidine binding domain
ATY47_RS20725	PF02780	Transketolase, C-terminal domain
ATY47_RS20740	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS20750	PF00108	Thiolase, N-terminal domain
ATY47_RS20750	PF02803	Thiolase, C-terminal domain
ATY47_RS20800	PF05598	Transposase domain (DUF772)
ATY47_RS20800	PF01609	Transposase DDE domain
ATY47_RS20830	PF01427	D-ala-D-ala dipeptidase
ATY47_RS20835	PF01510	N-acetylmuramoyl-L-alanine amidase
ATY47_RS20845	PF13378	Enolase C-terminal domain-like
ATY47_RS20845	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
ATY47_RS20875	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS20885	PF13520	Amino acid permease
ATY47_RS20900	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS20920	PF05360	yiaA/B two helix domain
ATY47_RS20925	PF05598	Transposase domain (DUF772)
ATY47_RS20925	PF01609	Transposase DDE domain
ATY47_RS20930	PF07995	Glucose / Sorbosone dehydrogenase
ATY47_RS20960	PF00665	Integrase core domain
ATY47_RS20960	PF13936	Helix-turn-helix domain
ATY47_RS20965	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ATY47_RS20965	PF14310	Fibronectin type III-like domain
ATY47_RS20965	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS20970	PF02152	Dihydroneopterin aldolase
ATY47_RS20975	PF00814	Glycoprotease family
ATY47_RS20980	PF01165	Ribosomal protein S21
ATY47_RS20985	PF09424	Yqey-like protein
ATY47_RS20995	PF03631	Virulence factor BrkB
ATY47_RS21000	PF08275	DNA primase catalytic core, N-terminal domain
ATY47_RS21000	PF10410	DnaB-helicase binding domain of primase
ATY47_RS21000	PF08278	DNA primase DnaG DnaB-binding 
ATY47_RS21000	PF01807	CHC2 zinc finger
ATY47_RS21015	PF13593	SBF-like CPA transporter family (DUF4137)
ATY47_RS21030	PF01040	UbiA prenyltransferase family
ATY47_RS21055	PF00510	Cytochrome c oxidase subunit III
ATY47_RS21060	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
ATY47_RS21065	PF00115	Cytochrome C and Quinol oxidase polypeptide I
ATY47_RS21070	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
ATY47_RS21070	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
ATY47_RS21080	PF01619	Proline dehydrogenase
ATY47_RS21080	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
ATY47_RS21080	PF14850	DNA-binding domain of Proline dehydrogenase
ATY47_RS21080	PF00171	Aldehyde dehydrogenase family
ATY47_RS21085	PF01527	Transposase
ATY47_RS21100	PF00210	Ferritin-like domain
ATY47_RS21110	PF00293	NUDIX domain
ATY47_RS21125	PF00380	Ribosomal protein S9/S16
ATY47_RS21130	PF00572	Ribosomal protein L13
ATY47_RS21135	PF03232	Ubiquinone biosynthesis protein COQ7
ATY47_RS21140	PF00893	Small Multidrug Resistance protein
ATY47_RS21145	PF02675	S-adenosylmethionine decarboxylase 
ATY47_RS21150	PF00325	Bacterial regulatory proteins, crp family
ATY47_RS21150	PF00027	Cyclic nucleotide-binding domain
ATY47_RS21160	PF00218	Indole-3-glycerol phosphate synthase
ATY47_RS21165	PF00591	Glycosyl transferase family, a/b domain
ATY47_RS21165	PF02885	Glycosyl transferase family, helical bundle domain
ATY47_RS21180	PF00117	Glutamine amidotransferase class-I
ATY47_RS21190	PF01527	Transposase
ATY47_RS21195	PF13683	Integrase core domain
ATY47_RS21195	PF13276	HTH-like domain
ATY47_RS21205	PF03971	Monomeric isocitrate dehydrogenase
ATY47_RS21215	PF05598	Transposase domain (DUF772)
ATY47_RS21250	PF05598	Transposase domain (DUF772)
ATY47_RS21250	PF01609	Transposase DDE domain
ATY47_RS21260	PF00872	Transposase, Mutator family
ATY47_RS21265	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
ATY47_RS21265	PF14489	QueF-like protein
ATY47_RS21275	PF01546	Peptidase family M20/M25/M40
ATY47_RS21275	PF07687	Peptidase dimerisation domain
ATY47_RS21280	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATY47_RS21285	PF00873	AcrB/AcrD/AcrF family
ATY47_RS21290	PF00873	AcrB/AcrD/AcrF family
ATY47_RS21295	PF07063	Domain of unknown function (DUF1338)
ATY47_RS21325	PF00581	Rhodanese-like domain
ATY47_RS21330	PF02556	Preprotein translocase subunit SecB
ATY47_RS21335	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
ATY47_RS21335	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ATY47_RS21345	PF00205	Thiamine pyrophosphate enzyme, central domain
ATY47_RS21345	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ATY47_RS21345	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
ATY47_RS21350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS21350	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS21355	PF00072	Response regulator receiver domain
ATY47_RS21355	PF00158	Sigma-54 interaction domain
ATY47_RS21355	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS21370	PF07690	Major Facilitator Superfamily
ATY47_RS21375	PF00588	SpoU rRNA Methylase family
ATY47_RS21390	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ATY47_RS21390	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
ATY47_RS21395	PF13784	Fic/DOC family N-terminal
ATY47_RS21395	PF02661	Fic/DOC family
ATY47_RS21400	PF01555	DNA methylase
ATY47_RS21410	PF00561	alpha/beta hydrolase fold
ATY47_RS21415	PF03692	Putative zinc- or iron-chelating domain
ATY47_RS21420	PF00501	AMP-binding enzyme
ATY47_RS21425	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
ATY47_RS21435	PF05598	Transposase domain (DUF772)
ATY47_RS21445	PF11871	Domain of unknown function (DUF3391)
ATY47_RS21445	PF01966	HD domain
ATY47_RS21450	PF07690	Major Facilitator Superfamily
ATY47_RS21480	PF00132	Bacterial transferase hexapeptide (six repeats)
ATY47_RS21485	PF03692	Putative zinc- or iron-chelating domain
ATY47_RS21490	PF00920	Dehydratase family
ATY47_RS21495	PF13495	Phage integrase, N-terminal SAM-like domain
ATY47_RS21495	PF00589	Phage integrase family
ATY47_RS21500	PF05598	Transposase domain (DUF772)
ATY47_RS21510	PF05598	Transposase domain (DUF772)
ATY47_RS21510	PF01609	Transposase DDE domain
ATY47_RS21525	PF01218	Coproporphyrinogen III oxidase
ATY47_RS21530	PF01367	5'-3' exonuclease, C-terminal SAM fold
ATY47_RS21530	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
ATY47_RS21530	PF00476	DNA polymerase family A
ATY47_RS21530	PF01612	3'-5' exonuclease
ATY47_RS21560	PF01966	HD domain
ATY47_RS21560	PF13286	Phosphohydrolase-associated domain
ATY47_RS21565	PF17831	Pyruvate dehydrogenase E1 component middle domain
ATY47_RS21565	PF00456	Transketolase, thiamine diphosphate binding domain
ATY47_RS21600	PF05598	Transposase domain (DUF772)
ATY47_RS21610	PF13276	HTH-like domain
ATY47_RS21610	PF13333	Integrase core domain
ATY47_RS21610	PF00665	Integrase core domain
ATY47_RS21640	PF04264	YceI-like domain
ATY47_RS21645	PF00881	Nitroreductase family
ATY47_RS21675	PF02592	Putative vitamin uptake transporter
ATY47_RS21680	PF08335	GlnD PII-uridylyltransferase
ATY47_RS21680	PF03710	Glutamate-ammonia ligase adenylyltransferase
ATY47_RS21690	PF08450	SMP-30/Gluconolactonase/LRE-like region
ATY47_RS21735	PF00793	DAHP synthetase I family
ATY47_RS21750	PF00593	TonB dependent receptor
ATY47_RS21750	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS21760	PF00118	TCP-1/cpn60 chaperonin family
ATY47_RS21765	PF00166	Chaperonin 10 Kd subunit
ATY47_RS21795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATY47_RS21805	PF04545	Sigma-70, region 4
ATY47_RS21805	PF04542	Sigma-70 region 2 
ATY47_RS21810	PF03167	Uracil DNA glycosylase superfamily
ATY47_RS21815	PF00072	Response regulator receiver domain
ATY47_RS21815	PF01339	CheB methylesterase
ATY47_RS21820	PF18075	FtsX extracellular domain
ATY47_RS21825	PF00005	ABC transporter
ATY47_RS21830	PF00270	DEAD/DEAH box helicase
ATY47_RS21830	PF00271	Helicase conserved C-terminal domain
ATY47_RS21830	PF12300	ATP-dependent RNA helicase RhlB 
ATY47_RS21835	PF00085	Thioredoxin
ATY47_RS21840	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATY47_RS21840	PF07498	Rho termination factor, N-terminal domain
ATY47_RS21840	PF07497	Rho termination factor, RNA-binding domain
ATY47_RS21850	PF01527	Transposase
ATY47_RS21860	PF17243	POTRA domain TamA domain 1
ATY47_RS21860	PF01103	Surface antigen
ATY47_RS21865	PF04357	TamB, inner membrane protein subunit of TAM complex
ATY47_RS21900	PF07977	FabA-like domain
ATY47_RS21905	PF01553	Acyltransferase
ATY47_RS21915	PF00550	Phosphopantetheine attachment site
ATY47_RS21920	PF04820	Tryptophan halogenase
ATY47_RS21970	PF01638	HxlR-like helix-turn-helix
ATY47_RS21975	PF05368	NmrA-like family
ATY47_RS21985	PF03812	2-keto-3-deoxygluconate permease
ATY47_RS21990	PF08267	Cobalamin-independent synthase, N-terminal domain
ATY47_RS21990	PF01717	Cobalamin-independent synthase, Catalytic domain
ATY47_RS22000	PF03358	NADPH-dependent FMN reductase
ATY47_RS22005	PF03466	LysR substrate binding domain
ATY47_RS22005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS22010	PF02677	Epoxyqueuosine reductase QueH
ATY47_RS22025	PF00672	HAMP domain
ATY47_RS22025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS22025	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS22030	PF00672	HAMP domain
ATY47_RS22030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS22030	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS22035	PF00072	Response regulator receiver domain
ATY47_RS22035	PF00486	Transcriptional regulatory protein, C terminal
ATY47_RS22040	PF00551	Formyl transferase
ATY47_RS22060	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
ATY47_RS22060	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
ATY47_RS22065	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
ATY47_RS22070	PF02146	Sir2 family
ATY47_RS22080	PF07690	Major Facilitator Superfamily
ATY47_RS22085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS22085	PF03466	LysR substrate binding domain
ATY47_RS22100	PF01026	TatD related DNase
ATY47_RS22135	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS22155	PF00266	Aminotransferase class-V
ATY47_RS22170	PF09349	OHCU decarboxylase
ATY47_RS22170	PF01014	Uricase
ATY47_RS22175	PF00576	HIUase/Transthyretin family
ATY47_RS22220	PF00665	Integrase core domain
ATY47_RS22220	PF13936	Helix-turn-helix domain
ATY47_RS22225	PF00326	Prolyl oligopeptidase family
ATY47_RS22230	PF18140	Propionyl-coenzyme A carboxylase BT domain
ATY47_RS22230	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATY47_RS22230	PF02785	Biotin carboxylase C-terminal domain
ATY47_RS22230	PF00289	Biotin carboxylase, N-terminal domain
ATY47_RS22230	PF00364	Biotin-requiring enzyme
ATY47_RS22235	PF01039	Carboxyl transferase domain
ATY47_RS22240	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATY47_RS22240	PF02770	Acyl-CoA dehydrogenase, middle domain
ATY47_RS22240	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATY47_RS22300	PF07683	Cobalamin synthesis protein cobW C-terminal domain
ATY47_RS22300	PF02492	CobW/HypB/UreG, nucleotide-binding domain
ATY47_RS22320	PF03969	AFG1-like ATPase
ATY47_RS22325	PF03412	Peptidase C39 family
ATY47_RS22325	PF00005	ABC transporter
ATY47_RS22325	PF00664	ABC transporter transmembrane region
ATY47_RS22335	PF07715	TonB-dependent Receptor Plug Domain
ATY47_RS22335	PF00593	TonB dependent receptor
ATY47_RS22340	PF13181	Tetratricopeptide repeat
ATY47_RS22345	PF05746	DALR anticodon binding domain
ATY47_RS22345	PF02092	Glycyl-tRNA synthetase beta subunit
ATY47_RS22350	PF02091	Glycyl-tRNA synthetase alpha subunit
ATY47_RS22355	PF00437	Type II/IV secretion system protein
ATY47_RS22355	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
ATY47_RS22370	PF00117	Glutamine amidotransferase class-I
ATY47_RS22370	PF00958	GMP synthase C terminal domain
ATY47_RS22380	PF00902	Sec-independent protein translocase protein (TatC)
ATY47_RS22385	PF02416	mttA/Hcf106 family
ATY47_RS22390	PF02416	mttA/Hcf106 family
ATY47_RS22400	PF00762	Ferrochelatase
ATY47_RS22405	PF12697	Alpha/beta hydrolase family
ATY47_RS22425	PF04381	Putative exonuclease, RdgC
ATY47_RS22430	PF01171	PP-loop family
ATY47_RS22440	PF00356	Bacterial regulatory proteins, lacI family
ATY47_RS22445	PF07477	Glycosyl hydrolase family 67 C-terminus
ATY47_RS22445	PF07488	Glycosyl hydrolase family 67 middle domain
ATY47_RS22445	PF03648	Glycosyl hydrolase family 67 N-terminus
ATY47_RS22455	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
ATY47_RS22455	PF13378	Enolase C-terminal domain-like
ATY47_RS22460	PF04616	Glycosyl hydrolases family 43
ATY47_RS22460	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
ATY47_RS22465	PF14310	Fibronectin type III-like domain
ATY47_RS22465	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATY47_RS22465	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ATY47_RS22465	PF07691	PA14 domain
ATY47_RS22470	PF01232	Mannitol dehydrogenase Rossmann domain
ATY47_RS22470	PF08125	Mannitol dehydrogenase C-terminal domain
ATY47_RS22490	PF02614	Glucuronate isomerase
ATY47_RS22495	PF00553	Cellulose binding domain
ATY47_RS22495	PF03422	Carbohydrate binding module (family 6)
ATY47_RS22495	PF00331	Glycosyl hydrolase family 10
ATY47_RS22500	PF00331	Glycosyl hydrolase family 10
ATY47_RS22500	PF03422	Carbohydrate binding module (family 6)
ATY47_RS22500	PF00553	Cellulose binding domain
ATY47_RS22525	PF04616	Glycosyl hydrolases family 43
ATY47_RS22555	PF13340	Putative transposase of IS4/5 family (DUF4096)
ATY47_RS22565	PF00563	EAL domain
ATY47_RS22565	PF12792	CSS motif domain associated with EAL 
ATY47_RS22570	PF00487	Fatty acid desaturase
ATY47_RS22575	PF00111	2Fe-2S iron-sulfur cluster binding domain
ATY47_RS22575	PF00175	Oxidoreductase NAD-binding domain 
ATY47_RS22575	PF00970	Oxidoreductase FAD-binding domain
ATY47_RS22580	PF00440	Bacterial regulatory proteins, tetR family
ATY47_RS22615	PF01047	MarR family
ATY47_RS22620	PF02566	OsmC-like protein
ATY47_RS22700	PF01381	Helix-turn-helix
ATY47_RS22705	PF05015	RelE-like toxin of type II toxin-antitoxin system HigB
ATY47_RS22710	PF13538	UvrD-like helicase C-terminal domain
ATY47_RS22715	PF12705	PD-(D/E)XK nuclease superfamily
ATY47_RS22715	PF00580	UvrD/REP helicase N-terminal domain
ATY47_RS22715	PF13361	UvrD-like helicase C-terminal domain
ATY47_RS22720	PF17946	RecC C-terminal domain
ATY47_RS22760	PF00080	Copper/zinc superoxide dismutase (SODC)
ATY47_RS22765	PF00080	Copper/zinc superoxide dismutase (SODC)
ATY47_RS22770	PF00158	Sigma-54 interaction domain
ATY47_RS22770	PF02954	Bacterial regulatory protein, Fis family
ATY47_RS22770	PF00072	Response regulator receiver domain
ATY47_RS22775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATY47_RS22775	PF00512	His Kinase A (phospho-acceptor) domain
ATY47_RS22775	PF00989	PAS fold
ATY47_RS22780	PF00909	Ammonium Transporter Family
ATY47_RS22785	PF00543	Nitrogen regulatory protein P-II
ATY47_RS22790	PF00120	Glutamine synthetase, catalytic domain
ATY47_RS22790	PF03951	Glutamine synthetase, beta-Grasp domain
ATY47_RS22795	PF02673	Bacitracin resistance protein BacA
ATY47_RS22835	PF03061	Thioesterase superfamily
ATY47_RS22840	PF13091	PLD-like domain
ATY47_RS22855	PF10609	NUBPL iron-transfer P-loop NTPase
ATY47_RS22855	PF01883	Iron-sulfur cluster assembly protein
ATY47_RS22875	PF01381	Helix-turn-helix
ATY47_RS22880	PF07804	HipA-like C-terminal domain
ATY47_RS22880	PF13657	HipA N-terminal domain
ATY47_RS22885	PF10017	Histidine-specific methyltransferase, SAM-dependent
ATY47_RS22890	PF12867	DinB superfamily
ATY47_RS22890	PF03781	Sulfatase-modifying factor enzyme 1
ATY47_RS22900	PF00528	Binding-protein-dependent transport system inner membrane component
ATY47_RS22905	PF00005	ABC transporter
ATY47_RS22905	PF00571	CBS domain
ATY47_RS22920	PF00005	ABC transporter
ATY47_RS22930	PF01734	Patatin-like phospholipase
ATY47_RS22945	PF01609	Transposase DDE domain
ATY47_RS22945	PF05598	Transposase domain (DUF772)
ATY47_RS22950	PF13683	Integrase core domain
ATY47_RS22950	PF13276	HTH-like domain
ATY47_RS22955	PF01527	Transposase
ATY47_RS22970	PF00248	Aldo/keto reductase family
ATY47_RS22975	PF16884	N-terminal domain of oxidoreductase
ATY47_RS22975	PF00107	Zinc-binding dehydrogenase
ATY47_RS22980	PF00248	Aldo/keto reductase family
ATY47_RS22990	PF00849	RNA pseudouridylate synthase
ATY47_RS23005	PF00271	Helicase conserved C-terminal domain
ATY47_RS23005	PF08482	ATP-dependent helicase C-terminal
ATY47_RS23005	PF04408	Helicase associated domain (HA2)
ATY47_RS23005	PF00270	DEAD/DEAH box helicase
ATY47_RS23010	PF07308	Protein of unknown function (DUF1456)
ATY47_RS23015	PF13378	Enolase C-terminal domain-like
ATY47_RS23015	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
ATY47_RS23020	PF01557	Fumarylacetoacetate (FAA) hydrolase family
ATY47_RS23035	PF00248	Aldo/keto reductase family
ATY47_RS23045	PF04616	Glycosyl hydrolases family 43
ATY47_RS23045	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
ATY47_RS23070	PF00196	Bacterial regulatory proteins, luxR family
ATY47_RS23070	PF00072	Response regulator receiver domain
ATY47_RS23075	PF00501	AMP-binding enzyme
ATY47_RS23075	PF16177	Acetyl-coenzyme A synthetase N-terminus
ATY47_RS23075	PF13193	AMP-binding enzyme C-terminal domain
ATY47_RS23090	PF04341	Protein of unknown function, DUF485
ATY47_RS23095	PF00474	Sodium:solute symporter family
ATY47_RS23110	PF03372	Endonuclease/Exonuclease/phosphatase family
ATY47_RS23120	PF04226	Transglycosylase associated protein
ATY47_RS23125	PF01648	4'-phosphopantetheinyl transferase superfamily
ATY47_RS23130	PF09423	PhoD-like phosphatase
ATY47_RS23130	PF16655	PhoD-like phosphatase, N-terminal domain
ATY47_RS23135	PF16655	PhoD-like phosphatase, N-terminal domain
ATY47_RS23135	PF09423	PhoD-like phosphatase
ATY47_RS23140	PF02527	rRNA small subunit methyltransferase G
ATY47_RS23155	PF00830	Ribosomal L28 family
ATY47_RS23160	PF00471	Ribosomal protein L33
ATY47_RS23165	PF04909	Amidohydrolase
ATY47_RS23175	PF04909	Amidohydrolase
ATY47_RS23180	PF04303	PrpF protein
ATY47_RS23185	PF03737	Aldolase/RraA
ATY47_RS23190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATY47_RS23190	PF03466	LysR substrate binding domain
ATY47_RS23195	PF13091	PLD-like domain
ATY47_RS23195	PF13396	Phospholipase_D-nuclease N-terminal
ATY47_RS23210	PF13361	UvrD-like helicase C-terminal domain
ATY47_RS23210	PF00580	UvrD/REP helicase N-terminal domain
ATY47_RS23225	PF13520	Amino acid permease
ATY47_RS23230	PF02646	RmuC family
ATY47_RS23240	PF00255	Glutathione peroxidase
ATY47_RS23250	PF05598	Transposase domain (DUF772)
ATY47_RS23265	PF04055	Radical SAM superfamily
ATY47_RS23275	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
ATY47_RS23290	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ATY47_RS23290	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ATY47_RS23300	PF03572	Peptidase family S41
ATY47_RS23300	PF13180	PDZ domain
ATY47_RS23305	PF01551	Peptidase family M23
ATY47_RS23315	PF04389	Peptidase family M28
ATY47_RS23330	PF05598	Transposase domain (DUF772)
ATY47_RS23365	PF02463	RecF/RecN/SMC N terminal domain
ATY47_RS23370	PF01227	GTP cyclohydrolase I
ATY47_RS23395	PF00083	Sugar (and other) transporter
ATY47_RS23420	PF05598	Transposase domain (DUF772)
ATY47_RS23470	PF02595	Glycerate kinase family
ATY47_RS23475	PF07690	Major Facilitator Superfamily
ATY47_RS23490	PF10672	S-adenosylmethionine-dependent methyltransferase
ATY47_RS23490	PF17785	PUA-like domain
ATY47_RS23495	PF03741	Integral membrane protein TerC family
ATY47_RS23500	PF01694	Rhomboid family
ATY47_RS23505	PF03009	Glycerophosphoryl diester phosphodiesterase family
ATY47_RS23515	PF01569	PAP2 superfamily
ATY47_RS23520	PF01926	50S ribosome-binding GTPase
ATY47_RS23520	PF12631	MnmE helical domain
ATY47_RS23520	PF10396	GTP-binding protein TrmE N-terminus
ATY47_RS23525	PF01522	Polysaccharide deacetylase
ATY47_RS23530	PF02096	60Kd inner membrane protein
ATY47_RS23530	PF14849	YidC periplasmic domain
ATY47_RS23535	PF00825	Ribonuclease P
ATY47_RS23540	PF00468	Ribosomal protein L34
