locus-tag	class	description
ATY49_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ATY49_RS00020	COG0187	DNA topoisomerase II activity
ATY49_RS00030	COG0501	Belongs to the peptidase M48B family
ATY49_RS00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY49_RS00080	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ATY49_RS00090	COG4772	TonB-dependent receptor
ATY49_RS00105	COG3039	Transposase
ATY49_RS00110	COG1304	FMN binding
ATY49_RS00115	COG1755	Isoprenylcysteine carboxyl methyltransferase
ATY49_RS00135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY49_RS00150	COG3039	Transposase
ATY49_RS00160	COG1116	anion transmembrane transporter activity
ATY49_RS00180	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY49_RS00200	COG3039	Transposase
ATY49_RS00210	COG0513	Belongs to the DEAD box helicase family
ATY49_RS00245	COG3039	Transposase
ATY49_RS00300	COG1858	cytochrome C peroxidase
ATY49_RS00310	COG0702	epimerase
ATY49_RS00335	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ATY49_RS00355	COG1649	PFAM Uncharacterised BCR, COG1649
ATY49_RS00360	COG2354	Protein conserved in bacteria
ATY49_RS00365	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY49_RS00375	COG3293	Transposase
ATY49_RS00385	COG1511	domain protein
ATY49_RS00385	COG3264	Mechanosensitive ion channel
ATY49_RS00465	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ATY49_RS00575	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATY49_RS00585	COG0642	Histidine kinase
ATY49_RS00590	COG1090	epimerase
ATY49_RS00600	COG3039	Transposase
ATY49_RS00625	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS00675	COG1136	(ABC) transporter
ATY49_RS00690	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS00715	COG1272	protein, Hemolysin III
ATY49_RS00720	COG1111	helicase
ATY49_RS00720	COG1205	dead DEAH box helicase
ATY49_RS00775	COG0070	glutamate synthase
ATY49_RS00775	COG0067	glutamate synthase
ATY49_RS00775	COG0069	glutamate synthase activity
ATY49_RS00780	COG0493	'glutamate synthase
ATY49_RS00800	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS00825	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ATY49_RS00830	COG1609	Transcriptional regulator
ATY49_RS00855	COG0366	Alpha amylase catalytic
ATY49_RS00860	COG0366	Alpha amylase catalytic
ATY49_RS00865	COG2801	Transposase and inactivated derivatives
ATY49_RS00880	COG3328	transposase activity
ATY49_RS00910	COG0606	chelatase, subunit chli
ATY49_RS00945	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ATY49_RS00950	COG1166	arginine decarboxylase activity
ATY49_RS01015	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY49_RS01040	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS01055	COG2801	Transposase and inactivated derivatives
ATY49_RS01065	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ATY49_RS01080	COG0210	DNA helicase
ATY49_RS01095	COG3132	Protein of unknown function, DUF480
ATY49_RS01100	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
ATY49_RS01105	COG0284	orotidine-5'-phosphate decarboxylase activity
ATY49_RS01135	COG2937	Belongs to the GPAT DAPAT family
ATY49_RS01155	COG2963	transposase activity
ATY49_RS01170	COG2755	lipolytic protein G-D-S-L family
ATY49_RS01180	COG3186	Phenylalanine-4-hydroxylase
ATY49_RS01185	COG1522	sequence-specific DNA binding
ATY49_RS01200	COG4773	Receptor
ATY49_RS01205	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS01240	COG1064	alcohol dehydrogenase
ATY49_RS01245	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY49_RS01250	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY49_RS01260	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY49_RS01265	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS01290	COG3039	Transposase
ATY49_RS01295	COG0676	glucose-6-phosphate 1-epimerase activity
ATY49_RS01315	COG3135	benzoate transporter
ATY49_RS01320	COG3135	benzoate transporter
ATY49_RS01350	COG2801	Transposase and inactivated derivatives
ATY49_RS01355	COG2963	transposase activity
ATY49_RS01375	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ATY49_RS01395	COG3293	Transposase
ATY49_RS01415	COG2853	Lipoprotein
ATY49_RS01430	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY49_RS01435	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY49_RS01440	COG1127	ABC transporter
ATY49_RS01470	COG3293	Transposase
ATY49_RS01500	COG2801	Transposase and inactivated derivatives
ATY49_RS01505	COG2963	transposase activity
ATY49_RS01525	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY49_RS01530	COG3293	Transposase
ATY49_RS01540	COG3265	gluconokinase activity
ATY49_RS01545	COG2211	Major facilitator Superfamily
ATY49_RS01550	COG3459	Glycosyltransferase 36 associated
ATY49_RS01565	COG2205	protein histidine kinase activity
ATY49_RS01575	COG1414	Transcriptional regulator
ATY49_RS01580	COG0738	Major facilitator superfamily
ATY49_RS01585	COG3254	rhamnose metabolic process
ATY49_RS01610	COG0339	signal peptide processing
ATY49_RS01635	COG0564	pseudouridine synthase activity
ATY49_RS01645	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY49_RS01660	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY49_RS01695	COG3293	Transposase
ATY49_RS01700	COG2963	transposase activity
ATY49_RS01745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ATY49_RS01755	COG0842	Transport permease protein
ATY49_RS01760	COG1131	(ABC) transporter
ATY49_RS01765	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ATY49_RS01785	COG1476	TRANSCRIPTIONal
ATY49_RS01795	COG4555	ABC transporter
ATY49_RS01830	COG0625	glutathione transferase activity
ATY49_RS01875	COG0583	DNA-binding transcription factor activity
ATY49_RS01910	COG1199	ATP-dependent helicase activity
ATY49_RS01930	COG1566	PFAM secretion protein HlyD family protein
ATY49_RS01955	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY49_RS01995	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ATY49_RS01995	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ATY49_RS02000	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ATY49_RS02015	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ATY49_RS02050	COG3237	CsbD-like
ATY49_RS02055	COG0180	Tryptophanyl-tRNA synthetase
ATY49_RS02060	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY49_RS02110	COG0753	catalase activity
ATY49_RS02115	COG1595	DNA-templated transcription, initiation
ATY49_RS02125	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY49_RS02135	COG0628	permease
ATY49_RS02145	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ATY49_RS02150	COG1040	competence protein
ATY49_RS02155	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ATY49_RS02160	COG0156	8-amino-7-oxononanoate synthase activity
ATY49_RS02170	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS02185	COG0463	Glycosyl transferase, family 2
ATY49_RS02195	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATY49_RS02200	COG3100	YcgL domain-containing protein
ATY49_RS02215	COG3387	PFAM Glycoside hydrolase 15-related
ATY49_RS02220	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY49_RS02235	COG2239	Acts as a magnesium transporter
ATY49_RS02245	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ATY49_RS02245	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY49_RS02245	COG1042	CoA-binding domain protein
ATY49_RS02255	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY49_RS02260	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY49_RS02280	COG2963	transposase activity
ATY49_RS02290	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ATY49_RS02300	COG3485	protocatechuate 3,4-dioxygenase
ATY49_RS02305	COG3485	protocatechuate 3,4-dioxygenase
ATY49_RS02315	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ATY49_RS02320	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY49_RS02325	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATY49_RS02335	COG1414	Transcriptional regulator
ATY49_RS02345	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS02350	COG4221	oxidoreductase activity
ATY49_RS02365	COG0018	arginyl-trna synthetase
ATY49_RS02370	COG2003	Belongs to the UPF0758 family
ATY49_RS02375	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ATY49_RS02400	COG0463	Glycosyl transferase, family 2
ATY49_RS02415	COG1475	DNA binding
ATY49_RS02420	COG1192	Involved in chromosome partitioning
ATY49_RS02435	COG0708	Exodeoxyribonuclease III
ATY49_RS02440	COG2211	Major facilitator Superfamily
ATY49_RS02455	COG0739	heme binding
ATY49_RS02495	COG2963	transposase activity
ATY49_RS02505	COG0745	RESPONSE REGULATOR receiver
ATY49_RS02530	COG3293	Transposase
ATY49_RS02555	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ATY49_RS02575	COG2814	Major facilitator Superfamily
ATY49_RS02590	COG1289	transmembrane transporter activity
ATY49_RS02600	COG1136	(ABC) transporter
ATY49_RS02600	COG0577	efflux transmembrane transporter activity
ATY49_RS02605	COG0151	Belongs to the GarS family
ATY49_RS02620	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ATY49_RS02625	COG2267	carboxylic ester hydrolase activity
ATY49_RS02635	COG2267	carboxylic ester hydrolase activity
ATY49_RS02640	COG2453	phosphatase
ATY49_RS02640	COG0671	phosphoesterase, PA-phosphatase related
ATY49_RS02650	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ATY49_RS02690	COG0439	Biotin carboxylase
ATY49_RS02700	COG0511	ligase activity, forming carbon-carbon bonds
ATY49_RS02705	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ATY49_RS02720	COG1324	tolerance protein
ATY49_RS02745	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ATY49_RS02765	COG0534	Mate efflux family protein
ATY49_RS02770	COG0616	signal peptide processing
ATY49_RS02780	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS02795	COG0009	L-threonylcarbamoyladenylate synthase
ATY49_RS02800	COG1754	DNA topoisomerase type I activity
ATY49_RS02800	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ATY49_RS02815	COG2922	Belongs to the Smg family
ATY49_RS02820	COG0758	DNA mediated transformation
ATY49_RS02825	COG1652	LysM domain
ATY49_RS02830	COG0242	peptide deformylase activity
ATY49_RS02835	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ATY49_RS02840	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ATY49_RS02840	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY49_RS02890	COG1560	Kdo2-lipid A biosynthetic process
ATY49_RS02900	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY49_RS03100	COG1063	alcohol dehydrogenase
ATY49_RS03110	COG1294	oxidase, subunit
ATY49_RS03115	COG1271	oxidase subunit
ATY49_RS03120	COG2204	response regulator
ATY49_RS03150	COG2972	Histidine kinase
ATY49_RS03155	COG3279	Response regulator of the LytR AlgR family
ATY49_RS03160	COG3279	Response regulator of the LytR AlgR family
ATY49_RS03170	COG0531	amino acid
ATY49_RS03190	COG3590	peptidase
ATY49_RS03205	COG0667	Aldo Keto reductase
ATY49_RS03220	COG3384	dioxygenase
ATY49_RS03230	COG1573	uracil-dna glycosylase
ATY49_RS03240	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
ATY49_RS03255	COG0025	NhaP-type Na H and K H
ATY49_RS03260	COG1131	(ABC) transporter
ATY49_RS03265	COG0842	Transport permease protein
ATY49_RS03285	COG1404	Belongs to the peptidase S8 family
ATY49_RS03300	COG0745	RESPONSE REGULATOR receiver
ATY49_RS03350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY49_RS03375	COG2205	protein histidine kinase activity
ATY49_RS03375	COG2202	Pas domain
ATY49_RS03410	COG2813	Specifically methylates the guanine in position
ATY49_RS03415	COG1187	pseudouridine synthase activity
ATY49_RS03420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ATY49_RS03455	COG0697	spore germination
ATY49_RS03465	COG2011	ABC-type metal ion transport system permease component
ATY49_RS03495	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY49_RS03505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATY49_RS03525	COG0356	it plays a direct role in the translocation of protons across the membrane
ATY49_RS03535	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ATY49_RS03545	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ATY49_RS03550	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ATY49_RS03555	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ATY49_RS03560	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ATY49_RS03610	COG3842	ATPase activity
ATY49_RS03615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY49_RS03620	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY49_RS03635	COG3293	Transposase
ATY49_RS03680	COG0339	signal peptide processing
ATY49_RS03715	COG1956	GAF domain-containing protein
ATY49_RS03720	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ATY49_RS03730	COG0720	synthase
ATY49_RS03740	COG0513	Belongs to the DEAD box helicase family
ATY49_RS03780	COG0626	cystathionine gamma-synthase activity
ATY49_RS03820	COG3328	transposase activity
ATY49_RS03845	COG2086	electron transfer activity
ATY49_RS03870	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ATY49_RS03870	COG0662	Cupin 2, conserved barrel domain protein
ATY49_RS03875	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY49_RS03910	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY49_RS03910	COG3218	ABC-type transport auxiliary lipoprotein component
ATY49_RS03915	COG1127	ABC transporter
ATY49_RS03920	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY49_RS03935	COG0442	prolyl-tRNA aminoacylation
ATY49_RS03945	COG1183	phosphatidylcholine synthase activity
ATY49_RS03970	COG3039	Transposase
ATY49_RS04010	COG2801	Transposase and inactivated derivatives
ATY49_RS04015	COG2963	transposase activity
ATY49_RS04025	COG0525	valine-tRNA ligase activity
ATY49_RS04040	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY49_RS04050	COG0795	lipopolysaccharide-transporting ATPase activity
ATY49_RS04060	COG4974	Belongs to the 'phage' integrase family
ATY49_RS04065	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ATY49_RS04070	COG0047	phosphoribosylformylglycinamidine synthase activity
ATY49_RS04070	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ATY49_RS04075	COG5295	Hep Hag repeat protein
ATY49_RS04095	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY49_RS04105	COG1459	type II secretion system
ATY49_RS04110	COG2165	general secretion pathway protein
ATY49_RS04115	COG4970	Tfp pilus assembly protein FimT
ATY49_RS04120	COG2165	general secretion pathway protein
ATY49_RS04125	COG4795	General secretion pathway protein
ATY49_RS04130	COG3156	type II secretion system protein K
ATY49_RS04135	COG3166	PFAM Fimbrial assembly family protein
ATY49_RS04150	COG1450	Type ii and iii secretion system protein
ATY49_RS04165	COG2188	Transcriptional regulator
ATY49_RS04205	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ATY49_RS04210	COG1518	maintenance of DNA repeat elements
ATY49_RS04250	COG1399	metal-binding, possibly nucleic acid-binding protein
ATY49_RS04275	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS04280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY49_RS04290	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ATY49_RS04295	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ATY49_RS04320	COG3829	transcription factor binding
ATY49_RS04345	COG3039	Transposase
ATY49_RS04390	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS04400	COG0678	peroxiredoxin activity
ATY49_RS04420	COG0330	HflC and HflK could
ATY49_RS04425	COG0330	HflC and HflK could
ATY49_RS04440	COG0308	aminopeptidase N
ATY49_RS04465	COG3039	Transposase
ATY49_RS04485	COG1560	Kdo2-lipid A biosynthetic process
ATY49_RS04490	COG1519	Transferase
ATY49_RS04495	COG1538	Outer membrane efflux protein
ATY49_RS04500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY49_RS04530	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ATY49_RS04535	COG0066	3-isopropylmalate dehydratase activity
ATY49_RS04570	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ATY49_RS04580	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ATY49_RS04585	COG3710	Transcriptional regulator
ATY49_RS04610	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ATY49_RS04650	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY49_RS04660	COG3781	membrane
ATY49_RS04675	COG0625	glutathione transferase activity
ATY49_RS04685	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ATY49_RS04690	COG1217	gtp-binding protein TYPA
ATY49_RS04710	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ATY49_RS04730	COG2963	transposase activity
ATY49_RS04735	COG2801	Transposase and inactivated derivatives
ATY49_RS04780	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS04810	COG2963	transposase activity
ATY49_RS04840	COG3293	Transposase
ATY49_RS04860	COG3039	Transposase
ATY49_RS04880	COG3293	Transposase
ATY49_RS04885	COG0584	glycerophosphoryl diester phosphodiesterase
ATY49_RS04910	COG0473	3-isopropylmalate dehydrogenase activity
ATY49_RS04940	COG2963	transposase activity
ATY49_RS04965	COG0544	peptidyl-prolyl cis-trans isomerase activity
ATY49_RS05005	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ATY49_RS05030	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY49_RS05040	COG0631	protein serine/threonine phosphatase activity
ATY49_RS05105	COG0582	viral genome integration into host DNA
ATY49_RS05115	COG0859	PFAM glycosyl transferase family 9
ATY49_RS05120	COG3642	lipopolysaccharide core region biosynthetic process
ATY49_RS05125	COG1234	tRNA 3'-trailer cleavage
ATY49_RS05130	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ATY49_RS05140	COG0315	cyclic pyranopterin monophosphate synthase activity
ATY49_RS05145	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ATY49_RS05150	COG0314	molybdopterin synthase activity
ATY49_RS05245	COG0537	adenosine 5'-monophosphoramidase activity
ATY49_RS05265	COG0714	Associated with various cellular activities
ATY49_RS05285	COG0242	peptide deformylase activity
ATY49_RS05330	COG3039	Transposase
ATY49_RS05350	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY49_RS05355	COG0726	polysaccharide deacetylase
ATY49_RS05405	COG2211	Major facilitator Superfamily
ATY49_RS05415	COG1609	Transcriptional regulator
ATY49_RS05420	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS05425	COG2851	Citrate transporter
ATY49_RS05440	COG0642	Histidine kinase
ATY49_RS05450	COG2197	response regulator
ATY49_RS05465	COG0583	DNA-binding transcription factor activity
ATY49_RS05480	COG4191	Histidine kinase
ATY49_RS05500	COG0281	malic enzyme
ATY49_RS05500	COG0280	phosphate acetyltransferase
ATY49_RS05510	COG2963	transposase activity
ATY49_RS05515	COG2801	Transposase and inactivated derivatives
ATY49_RS05535	COG0352	thiamine-phosphate diphosphorylase activity
ATY49_RS05540	COG1773	rubredoxin
ATY49_RS05545	COG2912	Transglutaminase-like superfamily
ATY49_RS05565	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ATY49_RS05590	COG0006	proline dipeptidase activity
ATY49_RS05605	COG3293	Transposase
ATY49_RS05630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ATY49_RS05645	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ATY49_RS05650	COG1561	YicC-like family, N-terminal region
ATY49_RS05675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY49_RS05685	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ATY49_RS05715	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ATY49_RS05760	COG0714	Associated with various cellular activities
ATY49_RS05780	COG2304	oxidoreductase activity
ATY49_RS05800	COG1301	dicarboxylic acid transport
ATY49_RS05805	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ATY49_RS05810	COG4773	Receptor
ATY49_RS05815	COG0739	heme binding
ATY49_RS05820	COG1376	ErfK ybiS ycfS ynhG family protein
ATY49_RS05845	COG1022	Amp-dependent synthetase and ligase
ATY49_RS05855	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS05870	COG0642	Histidine kinase
ATY49_RS05890	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ATY49_RS05895	COG4149	molybdate abc transporter
ATY49_RS05900	COG0725	ABC transporter, periplasmic molybdate-binding protein
ATY49_RS05905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY49_RS05905	COG3453	Protein conserved in bacteria
ATY49_RS05940	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ATY49_RS05945	COG3293	Transposase
ATY49_RS05960	COG2205	protein histidine kinase activity
ATY49_RS05965	COG0745	RESPONSE REGULATOR receiver
ATY49_RS05980	COG3039	Transposase
ATY49_RS06015	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY49_RS06020	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATY49_RS06055	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ATY49_RS06075	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATY49_RS06090	COG2801	Transposase and inactivated derivatives
ATY49_RS06160	COG3293	Transposase
ATY49_RS06175	COG3039	Transposase
ATY49_RS06185	COG3293	Transposase
ATY49_RS06295	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ATY49_RS06295	COG0140	phosphoribosyl-ATP diphosphatase activity
ATY49_RS06305	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ATY49_RS06315	COG0131	Imidazoleglycerol-phosphate dehydratase
ATY49_RS06315	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ATY49_RS06330	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ATY49_RS06350	COG0124	histidyl-tRNA synthetase
ATY49_RS06355	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY49_RS06365	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ATY49_RS06400	COG1012	belongs to the aldehyde dehydrogenase family
ATY49_RS06420	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ATY49_RS06425	COG0697	spore germination
ATY49_RS06430	COG1794	racemase activity, acting on amino acids and derivatives
ATY49_RS06455	COG0671	phosphoesterase, PA-phosphatase related
ATY49_RS06470	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ATY49_RS06485	COG2183	response to ionizing radiation
ATY49_RS06495	COG0723	plastoquinol--plastocyanin reductase activity
ATY49_RS06495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY49_RS06510	COG3243	poly(R)-hydroxyalkanoic acid synthase
ATY49_RS06520	COG1183	phosphatidylcholine synthase activity
ATY49_RS06525	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS06565	COG0668	transmembrane transport
ATY49_RS06585	COG1914	H( )-stimulated, divalent metal cation uptake system
ATY49_RS06600	COG0583	DNA-binding transcription factor activity
ATY49_RS06615	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS06630	COG0583	DNA-binding transcription factor activity
ATY49_RS06635	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY49_RS06640	COG3002	Belongs to the UPF0753 family
ATY49_RS06655	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ATY49_RS06690	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY49_RS06690	COG0475	glutathione-regulated potassium exporter activity
ATY49_RS06695	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ATY49_RS06705	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATY49_RS06710	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ATY49_RS06720	COG0776	regulation of translation
ATY49_RS06725	COG0539	negative regulation of cytoplasmic translation
ATY49_RS06730	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ATY49_RS06745	COG2957	Belongs to the agmatine deiminase family
ATY49_RS06755	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY49_RS06775	COG0395	ABC-type sugar transport system, permease component
ATY49_RS06780	COG1175	transmembrane transport
ATY49_RS06810	COG2350	Protein conserved in bacteria
ATY49_RS06815	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ATY49_RS06820	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ATY49_RS06825	COG1187	pseudouridine synthase activity
ATY49_RS06850	COG0436	Aminotransferase
ATY49_RS06915	COG0277	FAD linked oxidase domain protein
ATY49_RS06920	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ATY49_RS06930	COG0531	amino acid
ATY49_RS06935	COG0531	amino acid
ATY49_RS06945	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ATY49_RS06975	COG2201	protein-glutamate methylesterase activity
ATY49_RS07025	COG0583	DNA-binding transcription factor activity
ATY49_RS07035	COG3039	Transposase
ATY49_RS07075	COG2963	transposase activity
ATY49_RS07080	COG2801	Transposase and inactivated derivatives
ATY49_RS07095	COG3039	Transposase
ATY49_RS07135	COG3039	Transposase
ATY49_RS07140	COG3039	Transposase
ATY49_RS07155	COG1278	Cold shock
ATY49_RS07165	COG3328	transposase activity
ATY49_RS07180	COG3039	Transposase
ATY49_RS07190	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY49_RS07215	COG0557	exoribonuclease II activity
ATY49_RS07240	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS07245	COG2226	methyltransferase
ATY49_RS07250	COG0646	methionine synthase
ATY49_RS07250	COG1410	methionine synthase
ATY49_RS07255	COG1410	methionine synthase
ATY49_RS07255	COG0646	methionine synthase
ATY49_RS07265	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY49_RS07275	COG1609	Transcriptional regulator
ATY49_RS07290	COG2900	Belongs to the SlyX family
ATY49_RS07305	COG0386	Belongs to the glutathione peroxidase family
ATY49_RS07315	COG1725	Transcriptional regulator
ATY49_RS07320	COG1131	(ABC) transporter
ATY49_RS07360	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS07370	COG3293	Transposase
ATY49_RS07410	COG2850	peptidyl-arginine hydroxylation
ATY49_RS07445	COG1132	(ABC) transporter
ATY49_RS07455	COG0583	DNA-binding transcription factor activity
ATY49_RS07470	COG0287	Prephenate dehydrogenase
ATY49_RS07470	COG1605	Chorismate mutase
ATY49_RS07475	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ATY49_RS07480	COG0484	heat shock protein binding
ATY49_RS07485	COG0443	Heat shock 70 kDa protein
ATY49_RS07490	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ATY49_RS07500	COG0497	DNA recombination
ATY49_RS07510	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY49_RS07515	COG2914	Belongs to the UPF0125 (RnfH) family
ATY49_RS07545	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS07555	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ATY49_RS07575	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS07610	COG2814	Major facilitator Superfamily
ATY49_RS07615	COG1566	PFAM secretion protein HlyD family protein
ATY49_RS07650	COG4774	siderophore transport
ATY49_RS07665	COG0367	asparagine synthase
ATY49_RS07680	COG1393	Belongs to the ArsC family
ATY49_RS07740	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATY49_RS07755	COG0233	cytoplasmic translational termination
ATY49_RS07765	COG0575	Belongs to the CDS family
ATY49_RS07775	COG0750	zinc metalloprotease
ATY49_RS07790	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY49_RS07795	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY49_RS07815	COG0825	malonyl-CoA metabolic process
ATY49_RS07825	COG4771	TonB-dependent receptor
ATY49_RS07830	COG1131	(ABC) transporter
ATY49_RS07850	COG1981	membrane
ATY49_RS07890	COG2895	sulfate adenylyltransferase (ATP) activity
ATY49_RS07890	COG0529	Catalyzes the synthesis of activated sulfate
ATY49_RS07920	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY49_RS07935	COG2040	homocysteine
ATY49_RS07940	COG0833	amino acid
ATY49_RS07950	COG0346	lactoylglutathione lyase activity
ATY49_RS07960	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY49_RS07960	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY49_RS07970	COG2878	Part of a membrane complex involved in electron transport
ATY49_RS07990	COG1595	DNA-templated transcription, initiation
ATY49_RS08015	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY49_RS08030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY49_RS08035	COG0251	oxidation-reduction process
ATY49_RS08045	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ATY49_RS08045	COG0392	lysyltransferase activity
ATY49_RS08050	COG3293	Transposase
ATY49_RS08100	COG2814	Major facilitator Superfamily
ATY49_RS08105	COG1902	pentaerythritol trinitrate reductase activity
ATY49_RS08115	COG2824	Alkylphosphonate utilization operon protein PhnA
ATY49_RS08130	COG1047	Peptidyl-prolyl cis-trans
ATY49_RS08165	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ATY49_RS08180	COG1451	nucleotide metabolic process
ATY49_RS08200	COG0183	Belongs to the thiolase family
ATY49_RS08230	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ATY49_RS08230	COG1793	dna ligase
ATY49_RS08240	COG1793	dna ligase
ATY49_RS08245	COG1201	RNA secondary structure unwinding
ATY49_RS08270	COG1278	Cold shock
ATY49_RS08275	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ATY49_RS08280	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ATY49_RS08290	COG3046	protein related to deoxyribodipyrimidine photolyase
ATY49_RS08295	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
ATY49_RS08300	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ATY49_RS08315	COG2954	triphosphatase activity
ATY49_RS08330	COG1381	Involved in DNA repair and RecF pathway recombination
ATY49_RS08360	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATY49_RS08375	COG1024	Enoyl-CoA hydratase
ATY49_RS08375	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY49_RS08395	COG1024	Enoyl-CoA hydratase
ATY49_RS08400	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS08470	COG2353	YceI-like domain
ATY49_RS08480	COG2353	YceI-like domain
ATY49_RS08490	COG1760	l-serine dehydratase
ATY49_RS08500	COG0626	cystathionine gamma-synthase activity
ATY49_RS08505	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY49_RS08510	COG0739	heme binding
ATY49_RS08520	COG1272	protein, Hemolysin III
ATY49_RS08530	COG0517	IMP dehydrogenase activity
ATY49_RS08530	COG0516	GMP reductase activity
ATY49_RS08535	COG0463	Glycosyl transferase, family 2
ATY49_RS08545	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ATY49_RS08555	COG4771	TonB-dependent receptor
ATY49_RS08560	COG1309	transcriptional regulator
ATY49_RS08570	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS08595	COG0509	glycine decarboxylation via glycine cleavage system
ATY49_RS08610	COG0330	HflC and HflK could
ATY49_RS08625	COG3956	TIGRFAM MazG family protein
ATY49_RS08635	COG0494	nUDIX hydrolase
ATY49_RS08645	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ATY49_RS08650	COG0837	glucose binding
ATY49_RS08665	COG1388	LysM domain
ATY49_RS08665	COG3858	chitin binding
ATY49_RS08675	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ATY49_RS08685	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY49_RS08745	COG3537	Alpha-1,2-mannosidase
ATY49_RS08800	COG3142	Participates in the control of copper homeostasis
ATY49_RS08805	COG1446	asparaginase
ATY49_RS08820	COG2304	oxidoreductase activity
ATY49_RS08850	COG0784	Response regulator, receiver
ATY49_RS08850	COG2198	Histidine kinase
ATY49_RS08850	COG0643	Histidine kinase
ATY49_RS08855	COG0840	transmembrane signaling receptor activity
ATY49_RS08860	COG0835	chemotaxis
ATY49_RS08875	COG0189	ligase activity
ATY49_RS08885	COG1397	ADP-ribosylglycohydrolase
ATY49_RS08895	COG1199	ATP-dependent helicase activity
ATY49_RS08905	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATY49_RS08910	COG1215	transferase activity, transferring glycosyl groups
ATY49_RS08920	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY49_RS08955	COG3293	Transposase
ATY49_RS08965	COG0837	glucose binding
ATY49_RS08985	COG1643	Atp-dependent helicase
ATY49_RS08990	COG0783	Belongs to the Dps family
ATY49_RS08995	COG0514	ATP-dependent DNA helicase (RecQ)
ATY49_RS09015	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ATY49_RS09030	COG3293	Transposase
ATY49_RS09075	COG1187	pseudouridine synthase activity
ATY49_RS09080	COG0602	queuosine metabolic process
ATY49_RS09090	COG2885	chlorophyll binding
ATY49_RS09105	COG0848	biopolymer transport protein
ATY49_RS09115	COG0824	Thioesterase
ATY49_RS09120	COG2255	four-way junction helicase activity
ATY49_RS09130	COG0632	four-way junction helicase activity
ATY49_RS09195	COG2963	transposase activity
ATY49_RS09215	COG2963	transposase activity
ATY49_RS09220	COG2801	Transposase and inactivated derivatives
ATY49_RS09250	COG2963	transposase activity
ATY49_RS09265	COG3209	COG3209 Rhs family protein
ATY49_RS09265	COG3209	COG3209 Rhs family protein
ATY49_RS09285	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ATY49_RS09290	COG1845	cytochrome c oxidase, subunit III
ATY49_RS09295	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ATY49_RS09310	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ATY49_RS09315	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ATY49_RS09325	COG0196	riboflavin kinase activity
ATY49_RS09335	COG3293	Transposase
ATY49_RS09340	COG0728	peptidoglycan biosynthetic process
ATY49_RS09345	COG0268	Binds directly to 16S ribosomal RNA
ATY49_RS09350	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ATY49_RS09355	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ATY49_RS09365	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ATY49_RS09370	COG0824	Thioesterase
ATY49_RS09385	COG1946	Acyl-CoA thioesterase
ATY49_RS09395	COG1595	DNA-templated transcription, initiation
ATY49_RS09415	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ATY49_RS09455	COG1877	trehalose-phosphatase activity
ATY49_RS09460	COG3387	PFAM Glycoside hydrolase 15-related
ATY49_RS09485	COG0564	pseudouridine synthase activity
ATY49_RS09490	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY49_RS09495	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ATY49_RS09495	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY49_RS09505	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ATY49_RS09510	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY49_RS09525	COG2184	nucleotidyltransferase activity
ATY49_RS09545	COG2194	sulfuric ester hydrolase activity
ATY49_RS09550	COG4969	Belongs to the N-Me-Phe pilin family
ATY49_RS09560	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ATY49_RS09585	COG3039	Transposase
ATY49_RS09590	COG3209	COG3209 Rhs family protein
ATY49_RS09595	COG3039	Transposase
ATY49_RS09610	COG3039	Transposase
ATY49_RS09620	COG3293	Transposase
ATY49_RS09630	COG1132	(ABC) transporter
ATY49_RS09660	COG0745	RESPONSE REGULATOR receiver
ATY49_RS09665	COG5002	protein histidine kinase activity
ATY49_RS09665	COG5000	phosphorelay sensor kinase activity
ATY49_RS09670	COG0475	glutathione-regulated potassium exporter activity
ATY49_RS09680	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY49_RS09700	COG1187	pseudouridine synthase activity
ATY49_RS09705	COG5002	protein histidine kinase activity
ATY49_RS09705	COG5001	Diguanylate cyclase
ATY49_RS09830	COG0415	Belongs to the DNA photolyase family
ATY49_RS09835	COG0305	Participates in initiation and elongation during chromosome replication
ATY49_RS09845	COG0367	asparagine synthase
ATY49_RS09870	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS09885	COG0084	hydrolase, TatD family'
ATY49_RS09890	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ATY49_RS09935	COG0735	belongs to the Fur family
ATY49_RS09940	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATY49_RS09970	COG3039	Transposase
ATY49_RS09990	COG3039	Transposase
ATY49_RS10015	COG2205	protein histidine kinase activity
ATY49_RS10030	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ATY49_RS10040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ATY49_RS10050	COG0643	Histidine kinase
ATY49_RS10050	COG2198	Histidine kinase
ATY49_RS10055	COG0840	transmembrane signaling receptor activity
ATY49_RS10060	COG0835	chemotaxis
ATY49_RS10065	COG2202	Pas domain
ATY49_RS10065	COG2200	EAL domain
ATY49_RS10065	COG2199	diguanylate cyclase activity
ATY49_RS10070	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ATY49_RS10085	COG3590	peptidase
ATY49_RS10105	COG1515	deoxyribonuclease V activity
ATY49_RS10115	COG1741	Belongs to the pirin family
ATY49_RS10190	COG1741	Belongs to the pirin family
ATY49_RS10195	COG1966	Carbon starvation protein
ATY49_RS10200	COG2879	small protein
ATY49_RS10230	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS10230	COG3321	synthase
ATY49_RS10230	COG0604	alcohol dehydrogenase
ATY49_RS10235	COG5001	Diguanylate cyclase
ATY49_RS10235	COG2203	Gaf domain
ATY49_RS10235	COG3706	GGDEF domain
ATY49_RS10235	COG4251	negative regulation of phosphorylation
ATY49_RS10240	COG0629	single-stranded DNA binding
ATY49_RS10245	COG0142	geranyltranstransferase activity
ATY49_RS10275	COG0527	aspartate kinase activity
ATY49_RS10285	COG0384	phenazine biosynthesis protein PhzF
ATY49_RS10290	COG0384	phenazine biosynthesis protein PhzF
ATY49_RS10300	COG1764	response to oxidative stress
ATY49_RS10315	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ATY49_RS10320	COG1678	Uncharacterized ACR, COG1678
ATY49_RS10335	COG0519	Catalyzes the synthesis of GMP from XMP
ATY49_RS10365	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATY49_RS10405	COG0693	protein deglycase activity
ATY49_RS10425	COG1959	2 iron, 2 sulfur cluster binding
ATY49_RS10430	COG0719	Fe-S assembly protein
ATY49_RS10435	COG0396	ATPase activity
ATY49_RS10440	COG0719	Fe-S assembly protein
ATY49_RS10445	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ATY49_RS10455	COG2146	nitrite reductase [NAD(P)H] activity
ATY49_RS10460	COG3039	Transposase
ATY49_RS10465	COG2963	transposase activity
ATY49_RS10470	COG2801	Transposase and inactivated derivatives
ATY49_RS10500	COG3328	transposase activity
ATY49_RS10510	COG2963	transposase activity
ATY49_RS10530	COG0326	Molecular chaperone. Has ATPase activity
ATY49_RS10535	COG2207	Transcriptional regulator
ATY49_RS10560	COG2755	lipolytic protein G-D-S-L family
ATY49_RS10560	COG0657	acetylesterase activity
ATY49_RS10585	COG0488	(ABC) transporter
ATY49_RS10620	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY49_RS10620	COG4651	solute:proton antiporter activity
ATY49_RS10625	COG2801	Transposase and inactivated derivatives
ATY49_RS10635	COG4772	TonB-dependent receptor
ATY49_RS10645	COG4264	IucA IucC family
ATY49_RS10660	COG0019	diaminopimelate decarboxylase activity
ATY49_RS10720	COG4206	TonB-dependent receptor
ATY49_RS10735	COG2963	transposase activity
ATY49_RS10750	COG0542	response to heat
ATY49_RS10780	COG0534	Mate efflux family protein
ATY49_RS10795	COG0336	Belongs to the RNA methyltransferase TrmD family
ATY49_RS10800	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ATY49_RS10805	COG0228	four-way junction DNA binding
ATY49_RS10830	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ATY49_RS10840	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY49_RS10895	COG1555	photosystem II stabilization
ATY49_RS10900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY49_RS10920	COG3178	'Phosphotransferase
ATY49_RS10925	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ATY49_RS10935	COG0628	permease
ATY49_RS10945	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ATY49_RS10960	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ATY49_RS10980	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ATY49_RS10985	COG0271	Belongs to the BolA IbaG family
ATY49_RS10995	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ATY49_RS11005	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ATY49_RS11010	COG1137	ATPase activity
ATY49_RS11025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY49_RS11030	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ATY49_RS11035	COG1660	Displays ATPase and GTPase activities
ATY49_RS11045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY49_RS11050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY49_RS11055	COG2239	Acts as a magnesium transporter
ATY49_RS11065	COG1294	oxidase, subunit
ATY49_RS11070	COG1271	oxidase subunit
ATY49_RS11080	COG1113	amino acid transport
ATY49_RS11095	COG2197	response regulator
ATY49_RS11100	COG0531	amino acid
ATY49_RS11165	COG0754	glutathionylspermidine amidase activity
ATY49_RS11190	COG1842	Phage shock protein A
ATY49_RS11205	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ATY49_RS11210	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ATY49_RS11220	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ATY49_RS11255	COG2201	protein-glutamate methylesterase activity
ATY49_RS11300	COG3293	Transposase
ATY49_RS11330	COG3293	Transposase
ATY49_RS11350	COG2201	protein-glutamate methylesterase activity
ATY49_RS11375	COG3039	Transposase
ATY49_RS11390	COG3328	transposase activity
ATY49_RS11425	COG0322	excinuclease ABC activity
ATY49_RS11435	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATY49_RS11445	COG1663	tetraacyldisaccharide 4'-kinase activity
ATY49_RS11460	COG0811	peptide transport
ATY49_RS11485	COG4591	ABC-type transport system involved in lipoprotein release permease component
ATY49_RS11500	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ATY49_RS11515	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ATY49_RS11525	COG0354	folic acid binding
ATY49_RS11540	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY49_RS11550	COG0363	glucosamine-6-phosphate deaminase activity
ATY49_RS11555	COG0129	dihydroxy-acid dehydratase activity
ATY49_RS11560	COG0800	Aldolase
ATY49_RS11595	COG2205	protein histidine kinase activity
ATY49_RS11595	COG0784	Response regulator, receiver
ATY49_RS11595	COG5002	protein histidine kinase activity
ATY49_RS11605	COG3293	Transposase
ATY49_RS11685	COG0386	Belongs to the glutathione peroxidase family
ATY49_RS11770	COG2203	Gaf domain
ATY49_RS11770	COG3706	GGDEF domain
ATY49_RS11770	COG4251	negative regulation of phosphorylation
ATY49_RS11770	COG5001	Diguanylate cyclase
ATY49_RS11785	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY49_RS11815	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ATY49_RS11830	COG0617	tRNA 3'-terminal CCA addition
ATY49_RS11840	COG1469	GTP cyclohydrolase I activity
ATY49_RS11845	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY49_RS11860	COG2963	transposase activity
ATY49_RS11900	COG4566	intracellular signal transduction
ATY49_RS11910	COG2963	transposase activity
ATY49_RS11920	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ATY49_RS11925	COG0077	Prephenate dehydratase
ATY49_RS11925	COG1605	Chorismate mutase
ATY49_RS11935	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ATY49_RS11975	COG1228	amidohydrolase
ATY49_RS11980	COG2986	histidine ammonia-lyase
ATY49_RS11990	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ATY49_RS12010	COG2963	transposase activity
ATY49_RS12020	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ATY49_RS12035	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ATY49_RS12050	COG3115	cell septum assembly
ATY49_RS12060	COG0359	binds to the 23S rRNA
ATY49_RS12070	COG0360	Binds together with S18 to 16S ribosomal RNA
ATY49_RS12075	COG0316	Belongs to the HesB IscA family
ATY49_RS12110	COG0288	reversible hydration of carbon dioxide
ATY49_RS12135	COG2925	Exonuclease
ATY49_RS12145	COG0667	Aldo Keto reductase
ATY49_RS12170	COG0116	Belongs to the methyltransferase superfamily
ATY49_RS12170	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY49_RS12175	COG0488	(ABC) transporter
ATY49_RS12180	COG4133	protoheme IX ABC transporter activity
ATY49_RS12185	COG0488	(ABC) transporter
ATY49_RS12220	COG0494	nUDIX hydrolase
ATY49_RS12230	COG1024	Enoyl-CoA hydratase
ATY49_RS12240	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ATY49_RS12255	COG3039	Transposase
ATY49_RS12270	COG3293	Transposase
ATY49_RS12290	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ATY49_RS12295	COG0573	inorganic phosphate transmembrane transporter activity
ATY49_RS12310	COG0704	Plays a role in the regulation of phosphate uptake
ATY49_RS12320	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY49_RS12335	COG3328	transposase activity
ATY49_RS12365	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY49_RS12370	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY49_RS12375	COG1862	Preprotein translocase
ATY49_RS12380	COG0343	queuine tRNA-ribosyltransferase activity
ATY49_RS12455	COG3293	Transposase
ATY49_RS12470	COG0405	Gamma-glutamyltransferase
ATY49_RS12475	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ATY49_RS12490	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ATY49_RS12495	COG0742	ribosomal rna small subunit methyltransferase
ATY49_RS12520	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ATY49_RS12555	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS12560	COG3039	Transposase
ATY49_RS12600	COG0303	'Molybdopterin
ATY49_RS12610	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY49_RS12620	COG1426	Protein conserved in bacteria
ATY49_RS12630	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ATY49_RS12645	COG1024	Enoyl-CoA hydratase
ATY49_RS12645	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY49_RS12650	COG0183	Belongs to the thiolase family
ATY49_RS12655	COG0038	chloride channel
ATY49_RS12675	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ATY49_RS12695	COG1674	ftsk spoiiie
ATY49_RS12700	COG0492	ferredoxin-NADP+ reductase activity
ATY49_RS12730	COG0542	response to heat
ATY49_RS12745	COG0482	sulfurtransferase activity
ATY49_RS12770	COG5001	Diguanylate cyclase
ATY49_RS12775	COG4585	Histidine kinase
ATY49_RS12785	COG5002	protein histidine kinase activity
ATY49_RS12805	COG0784	Response regulator, receiver
ATY49_RS12805	COG0835	chemotaxis
ATY49_RS12815	COG1558	bacterial-type flagellum-dependent cell motility
ATY49_RS12820	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ATY49_RS12830	COG4787	bacterial-type flagellum-dependent cell motility
ATY49_RS12865	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ATY49_RS12870	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ATY49_RS12900	COG2201	protein-glutamate methylesterase activity
ATY49_RS12920	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY49_RS12930	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS12960	COG1677	Flagellar hook-basal body complex protein FliE
ATY49_RS13010	COG3190	flagellar
ATY49_RS13025	COG1684	flagellar biosynthetic protein fliR
ATY49_RS13080	COG0784	Response regulator, receiver
ATY49_RS13080	COG2198	Histidine kinase
ATY49_RS13080	COG0643	Histidine kinase
ATY49_RS13095	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS13110	COG3039	Transposase
ATY49_RS13115	COG3209	COG3209 Rhs family protein
ATY49_RS13125	COG3039	Transposase
ATY49_RS13135	COG3039	Transposase
ATY49_RS13230	COG3039	Transposase
ATY49_RS13235	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ATY49_RS13240	COG4988	ABC transporter
ATY49_RS13250	COG1271	oxidase subunit
ATY49_RS13255	COG1294	oxidase, subunit
ATY49_RS13280	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ATY49_RS13300	COG0165	Argininosuccinate lyase
ATY49_RS13315	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ATY49_RS13320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY49_RS13330	COG0137	argininosuccinate synthase activity
ATY49_RS13335	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ATY49_RS13350	COG2166	iron-sulfur cluster assembly
ATY49_RS13380	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ATY49_RS13390	COG4302	ethanolamine ammonia-lyase activity
ATY49_RS13395	COG3293	Transposase
ATY49_RS13420	COG3039	Transposase
ATY49_RS13430	COG4677	pectinesterase activity
ATY49_RS13465	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY49_RS13470	COG0402	S-adenosylhomocysteine deaminase activity
ATY49_RS13485	COG1509	lysine 2,3-aminomutase activity
ATY49_RS13490	COG5001	Diguanylate cyclase
ATY49_RS13490	COG3300	MHYT domain
ATY49_RS13505	COG0483	inositol monophosphate 1-phosphatase activity
ATY49_RS13510	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY49_RS13535	COG0488	(ABC) transporter
ATY49_RS13540	COG0513	Belongs to the DEAD box helicase family
ATY49_RS13560	COG0625	glutathione transferase activity
ATY49_RS13570	COG1671	Belongs to the UPF0178 family
ATY49_RS13575	COG4681	YaeQ
ATY49_RS13580	COG2081	HI0933 family
ATY49_RS13600	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS13620	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ATY49_RS13625	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY49_RS13630	COG0802	atpase or kinase
ATY49_RS13635	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ATY49_RS13635	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ATY49_RS13640	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY49_RS13650	COG3293	Transposase
ATY49_RS13670	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY49_RS13725	COG3328	transposase activity
ATY49_RS13755	COG2969	positive regulation of protein catabolic process
ATY49_RS13760	COG0625	glutathione transferase activity
ATY49_RS13765	COG2857	Cytochrome c1
ATY49_RS13770	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ATY49_RS13775	COG0723	plastoquinol--plastocyanin reductase activity
ATY49_RS13780	COG0741	lytic transglycosylase activity
ATY49_RS13810	COG1702	phosphate starvation-inducible protein PhoH
ATY49_RS13830	COG4535	Mg2 and Co2 transporter CorC
ATY49_RS13845	COG1012	belongs to the aldehyde dehydrogenase family
ATY49_RS13855	COG1177	transmembrane transport
ATY49_RS13860	COG1176	ABC-type spermidine putrescine transport system, permease component I
ATY49_RS13865	COG3842	ATPase activity
ATY49_RS13900	COG0174	glutamine synthetase
ATY49_RS13905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY49_RS13915	COG0477	Major facilitator Superfamily
ATY49_RS13925	COG0243	molybdopterin cofactor binding
ATY49_RS13935	COG2223	nitrite transmembrane transporter activity
ATY49_RS13945	COG3293	Transposase
ATY49_RS13955	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ATY49_RS13960	COG1121	(ABC) transporter
ATY49_RS13970	COG2733	membrane
ATY49_RS13975	COG0784	Response regulator, receiver
ATY49_RS13975	COG2205	protein histidine kinase activity
ATY49_RS13975	COG5002	protein histidine kinase activity
ATY49_RS13985	COG3039	Transposase
ATY49_RS14000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY49_RS14005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY49_RS14025	COG1609	Transcriptional regulator
ATY49_RS14030	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY49_RS14030	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY49_RS14035	COG1105	Belongs to the carbohydrate kinase PfkB family
ATY49_RS14040	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY49_RS14040	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY49_RS14055	COG3039	Transposase
ATY49_RS14175	COG4771	TonB-dependent receptor
ATY49_RS14185	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY49_RS14205	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ATY49_RS14210	COG1360	Flagellar Motor Protein
ATY49_RS14220	COG0835	chemotaxis
ATY49_RS14230	COG0745	RESPONSE REGULATOR receiver
ATY49_RS14260	COG0840	transmembrane signaling receptor activity
ATY49_RS14270	COG0840	transmembrane signaling receptor activity
ATY49_RS14280	COG0840	transmembrane signaling receptor activity
ATY49_RS14285	COG0840	transmembrane signaling receptor activity
ATY49_RS14290	COG0840	transmembrane signaling receptor activity
ATY49_RS14295	COG0840	transmembrane signaling receptor activity
ATY49_RS14310	COG0835	chemotaxis
ATY49_RS14335	COG0840	transmembrane signaling receptor activity
ATY49_RS14365	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY49_RS14395	COG0318	PFAM AMP-dependent synthetase and ligase
ATY49_RS14400	COG1024	Enoyl-CoA hydratase
ATY49_RS14405	COG2198	Histidine kinase
ATY49_RS14405	COG2205	protein histidine kinase activity
ATY49_RS14405	COG0784	Response regulator, receiver
ATY49_RS14425	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATY49_RS14455	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ATY49_RS14465	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY49_RS14470	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ATY49_RS14480	COG0505	Belongs to the CarA family
ATY49_RS14485	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ATY49_RS14495	COG3293	Transposase
ATY49_RS14500	COG2258	MOSC domain
ATY49_RS14505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATY49_RS14555	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ATY49_RS14570	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS14580	COG0477	Major facilitator Superfamily
ATY49_RS14590	COG1070	Carbohydrate kinase
ATY49_RS14605	COG1501	Belongs to the glycosyl hydrolase 31 family
ATY49_RS14620	COG0800	Aldolase
ATY49_RS14625	COG4948	Mandelate Racemase Muconate Lactonizing
ATY49_RS14635	COG3734	2-keto-3-deoxy-galactonokinase
ATY49_RS14640	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ATY49_RS14650	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY49_RS14665	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ATY49_RS14670	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ATY49_RS14680	COG0351	phosphomethylpyrimidine kinase
ATY49_RS14710	COG0583	DNA-binding transcription factor activity
ATY49_RS14715	COG1741	Belongs to the pirin family
ATY49_RS14735	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ATY49_RS14740	COG0305	Participates in initiation and elongation during chromosome replication
ATY49_RS14760	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ATY49_RS14765	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ATY49_RS14770	COG2137	regulation of response to DNA damage stimulus
ATY49_RS14775	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ATY49_RS14790	COG1546	Belongs to the CinA family
ATY49_RS14795	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ATY49_RS14810	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ATY49_RS14820	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ATY49_RS14825	COG1534	Rna-binding protein
ATY49_RS14840	COG1238	metal cluster binding
ATY49_RS14845	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY49_RS14850	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ATY49_RS14855	COG2840	Smr protein MutS2
ATY49_RS14865	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ATY49_RS14880	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ATY49_RS14885	COG0148	phosphopyruvate hydratase activity
ATY49_RS14895	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ATY49_RS14900	COG0504	CTP synthase activity
ATY49_RS14930	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ATY49_RS14935	COG0306	phosphate transporter
ATY49_RS14945	COG1253	flavin adenine dinucleotide binding
ATY49_RS14960	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATY49_RS14970	COG0477	Major facilitator Superfamily
ATY49_RS14980	COG1132	(ABC) transporter
ATY49_RS14985	COG1136	(ABC) transporter
ATY49_RS15005	COG0438	transferase activity, transferring glycosyl groups
ATY49_RS15015	COG2264	protein methyltransferase activity
ATY49_RS15045	COG2244	polysaccharide biosynthetic process
ATY49_RS15095	COG1595	DNA-templated transcription, initiation
ATY49_RS15110	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY49_RS15130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY49_RS15190	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY49_RS15195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY49_RS15225	COG2963	transposase activity
ATY49_RS15240	COG4644	lycopene metabolic process
ATY49_RS15250	COG1858	cytochrome C peroxidase
ATY49_RS15290	COG0515	serine threonine protein kinase
ATY49_RS15295	COG0631	protein serine/threonine phosphatase activity
ATY49_RS15340	COG3039	Transposase
ATY49_RS15395	COG3039	Transposase
ATY49_RS15410	COG3039	Transposase
ATY49_RS15445	COG2801	Transposase and inactivated derivatives
ATY49_RS15455	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ATY49_RS15455	COG0316	Belongs to the HesB IscA family
ATY49_RS15460	COG2154	pterin-4-alpha-carbinolamine dehydratase
ATY49_RS15470	COG0428	transporter
ATY49_RS15475	COG0428	transporter
ATY49_RS15490	COG1530	ribonuclease E activity
ATY49_RS15500	COG3293	Transposase
ATY49_RS15510	COG1054	Belongs to the UPF0176 family
ATY49_RS15515	COG3039	Transposase
ATY49_RS15535	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATY49_RS15575	COG3039	Transposase
ATY49_RS15615	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ATY49_RS15615	COG1648	precorrin-2 dehydrogenase activity
ATY49_RS15640	COG0746	molybdenum cofactor guanylyltransferase activity
ATY49_RS15705	COG4206	TonB-dependent receptor
ATY49_RS15735	COG4206	TonB-dependent receptor
ATY49_RS15785	COG0531	amino acid
ATY49_RS15800	COG0006	proline dipeptidase activity
ATY49_RS15810	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY49_RS15825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY49_RS15830	COG3938	Belongs to the proline racemase family
ATY49_RS15840	COG0552	protein localization to endoplasmic reticulum
ATY49_RS15865	COG4191	Histidine kinase
ATY49_RS15865	COG0784	Response regulator, receiver
ATY49_RS15890	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY49_RS15995	COG0438	transferase activity, transferring glycosyl groups
ATY49_RS16005	COG0438	transferase activity, transferring glycosyl groups
ATY49_RS16010	COG0438	transferase activity, transferring glycosyl groups
ATY49_RS16080	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ATY49_RS16095	COG2963	transposase activity
ATY49_RS16115	COG0556	nucleotide-excision repair
ATY49_RS16120	COG4969	Belongs to the N-Me-Phe pilin family
ATY49_RS16160	COG1611	Belongs to the LOG family
ATY49_RS16175	COG2095	MarC family integral membrane protein
ATY49_RS16185	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY49_RS16220	COG1185	polyribonucleotide nucleotidyltransferase activity
ATY49_RS16225	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ATY49_RS16245	COG0195	Participates in both transcription termination and antitermination
ATY49_RS16250	COG0779	Required for maturation of 30S ribosomal subunits
ATY49_RS16260	COG1007	ATP synthesis coupled electron transport
ATY49_RS16290	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ATY49_RS16295	COG1034	ATP synthesis coupled electron transport
ATY49_RS16300	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ATY49_RS16305	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ATY49_RS16310	COG0649	NAD binding
ATY49_RS16315	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY49_RS16325	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY49_RS16340	COG0149	triose-phosphate isomerase activity
ATY49_RS16365	COG3293	Transposase
ATY49_RS16395	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY49_RS16400	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ATY49_RS16425	COG0135	phosphoribosylanthranilate isomerase activity
ATY49_RS16430	COG0101	tRNA pseudouridine synthase activity
ATY49_RS16450	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ATY49_RS16455	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATY49_RS16460	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ATY49_RS16465	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY49_RS16490	COG0433	COG0433 Predicted ATPase
ATY49_RS16495	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS16510	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY49_RS16520	COG0412	Dienelactone hydrolase
ATY49_RS16535	COG0717	Belongs to the dCTP deaminase family
ATY49_RS16540	COG0489	protein tyrosine kinase activity
ATY49_RS16575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY49_RS16580	COG2311	Membrane
ATY49_RS16585	COG1047	Peptidyl-prolyl cis-trans
ATY49_RS16590	COG0791	NLP P60 protein
ATY49_RS16595	COG0791	NLP P60 protein
ATY49_RS16610	COG1301	dicarboxylic acid transport
ATY49_RS16615	COG1785	Belongs to the alkaline phosphatase family
ATY49_RS16620	COG0037	tRNA processing
ATY49_RS16625	COG1722	exodeoxyribonuclease VII activity
ATY49_RS16630	COG0142	geranyltranstransferase activity
ATY49_RS16650	COG0312	modulator of DNA gyrase
ATY49_RS16660	COG0312	modulator of DNA gyrase
ATY49_RS16670	COG3164	Protein of unknown function
ATY49_RS16685	COG2968	Membrane
ATY49_RS16710	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ATY49_RS16730	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ATY49_RS16755	COG3118	belongs to the thioredoxin family
ATY49_RS16770	COG3293	Transposase
ATY49_RS16820	COG3293	Transposase
ATY49_RS16835	COG3039	Transposase
ATY49_RS16840	COG3039	Transposase
ATY49_RS16860	COG3293	Transposase
ATY49_RS16865	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS16895	COG2801	Transposase and inactivated derivatives
ATY49_RS16905	COG2963	transposase activity
ATY49_RS16940	COG2022	thiamine diphosphate biosynthetic process
ATY49_RS16950	COG3273	potassium ion transport
ATY49_RS16950	COG0471	metal ion transport
ATY49_RS16980	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS16990	COG1970	mechanosensitive ion channel activity
ATY49_RS17005	COG3293	Transposase
ATY49_RS17015	COG2272	Belongs to the type-B carboxylesterase lipase family
ATY49_RS17020	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY49_RS17050	COG0308	aminopeptidase N
ATY49_RS17055	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY49_RS17065	COG0529	Catalyzes the synthesis of activated sulfate
ATY49_RS17065	COG2895	sulfate adenylyltransferase (ATP) activity
ATY49_RS17070	COG0175	sulfate reduction
ATY49_RS17075	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ATY49_RS17080	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ATY49_RS17085	COG0175	sulfate reduction
ATY49_RS17105	COG0784	Response regulator, receiver
ATY49_RS17105	COG2205	protein histidine kinase activity
ATY49_RS17105	COG2198	Histidine kinase
ATY49_RS17155	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ATY49_RS17160	COG3588	fructose-bisphosphate aldolase
ATY49_RS17165	COG0469	pyruvate kinase activity
ATY49_RS17205	COG0753	catalase activity
ATY49_RS17225	COG3039	Transposase
ATY49_RS17245	COG2207	Transcriptional regulator
ATY49_RS17245	COG1917	Cupin 2, conserved barrel domain protein
ATY49_RS17270	COG0823	Involved in the tonB-independent uptake of proteins
ATY49_RS17270	COG1506	peptidase
ATY49_RS17295	COG1297	OPT oligopeptide transporter protein
ATY49_RS17310	COG0587	DNA-directed DNA polymerase activity
ATY49_RS17395	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ATY49_RS17400	COG0732	type I restriction modification DNA specificity domain
ATY49_RS17405	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
ATY49_RS17410	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ATY49_RS17430	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
ATY49_RS17625	COG3179	chitinase
ATY49_RS17715	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY49_RS17720	COG3039	Transposase
ATY49_RS17730	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY49_RS17790	COG2963	transposase activity
ATY49_RS17820	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ATY49_RS17835	COG2197	response regulator
ATY49_RS17840	COG4585	Histidine kinase
ATY49_RS17855	COG2894	cell division
ATY49_RS17860	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ATY49_RS17870	COG0642	Histidine kinase
ATY49_RS17875	COG0745	RESPONSE REGULATOR receiver
ATY49_RS17880	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ATY49_RS17890	COG2194	sulfuric ester hydrolase activity
ATY49_RS17920	COG3551	Protein conserved in bacteria
ATY49_RS17965	COG2963	transposase activity
ATY49_RS17975	COG3293	Transposase
ATY49_RS17990	COG0203	ribosomal protein L17
ATY49_RS18000	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ATY49_RS18005	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ATY49_RS18015	COG0201	protein transport
ATY49_RS18025	COG1841	ribosomal large subunit assembly
ATY49_RS18055	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ATY49_RS18065	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ATY49_RS18070	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ATY49_RS18075	COG0255	Belongs to the universal ribosomal protein uL29 family
ATY49_RS18080	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ATY49_RS18105	COG0089	rRNA binding
ATY49_RS18110	COG0088	Forms part of the polypeptide exit tunnel
ATY49_RS18115	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ATY49_RS18120	COG0051	transcription antitermination factor activity, RNA binding
ATY49_RS18140	COG0049	tRNA binding
ATY49_RS18145	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ATY49_RS18150	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ATY49_RS18155	COG0085	RNA polymerase activity
ATY49_RS18160	COG0222	ribosome binding
ATY49_RS18165	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ATY49_RS18175	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ATY49_RS18180	COG0250	Participates in transcription elongation, termination and antitermination
ATY49_RS18185	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ATY49_RS18215	COG0012	GTP binding
ATY49_RS18220	COG0193	aminoacyl-tRNA hydrolase activity
ATY49_RS18230	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ATY49_RS18245	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ATY49_RS18260	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATY49_RS18270	COG0521	Mo-molybdopterin cofactor biosynthetic process
ATY49_RS18290	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY49_RS18295	COG1295	ribonuclease BN
ATY49_RS18325	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ATY49_RS18335	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ATY49_RS18365	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ATY49_RS18390	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ATY49_RS18405	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY49_RS18405	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY49_RS18450	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY49_RS18460	COG3634	alkyl hydroperoxide reductase activity
ATY49_RS18465	COG0583	DNA-binding transcription factor activity
ATY49_RS18470	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY49_RS18475	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATY49_RS18535	COG4783	chaperone-mediated protein folding
ATY49_RS18550	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ATY49_RS18560	COG0438	transferase activity, transferring glycosyl groups
ATY49_RS18565	COG0671	phosphoesterase, PA-phosphatase related
ATY49_RS18570	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY49_RS18585	COG2833	Protein of unknown function (DUF455)
ATY49_RS18605	COG0285	dihydrofolate synthase activity
ATY49_RS18615	COG0406	alpha-ribazole phosphatase activity
ATY49_RS18645	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ATY49_RS18650	COG4208	sulfate ABC transporter
ATY49_RS18655	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ATY49_RS18660	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ATY49_RS18665	COG0156	8-amino-7-oxononanoate synthase activity
ATY49_RS18690	COG0604	alcohol dehydrogenase
ATY49_RS18695	COG1902	pentaerythritol trinitrate reductase activity
ATY49_RS18695	COG0446	pyridine nucleotide-disulphide oxidoreductase
ATY49_RS18705	COG2963	transposase activity
ATY49_RS18770	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS18780	COG3293	Transposase
ATY49_RS18830	COG3386	PFAM SMP-30 Gluconolaconase
ATY49_RS18850	COG1024	Enoyl-CoA hydratase
ATY49_RS18860	COG0318	PFAM AMP-dependent synthetase and ligase
ATY49_RS18865	COG0583	DNA-binding transcription factor activity
ATY49_RS18905	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY49_RS18910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY49_RS18920	COG2096	Adenosyltransferase
ATY49_RS18925	COG0123	including yeast histone deacetylase and acetoin utilization protein
ATY49_RS18940	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ATY49_RS18950	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ATY49_RS18955	COG2967	ApaG domain
ATY49_RS18960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ATY49_RS18980	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ATY49_RS19000	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ATY49_RS19015	COG0642	Histidine kinase
ATY49_RS19030	COG4181	ATPase activity
ATY49_RS19040	COG2175	clavaminate synthase activity
ATY49_RS19050	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ATY49_RS19090	COG0667	Aldo Keto reductase
ATY49_RS19100	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ATY49_RS19105	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY49_RS19120	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY49_RS19125	COG4106	trans-aconitate 2-methyltransferase activity
ATY49_RS19135	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ATY49_RS19145	COG3293	Transposase
ATY49_RS19185	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ATY49_RS19190	COG2226	methyltransferase
ATY49_RS19245	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS19245	COG0604	alcohol dehydrogenase
ATY49_RS19245	COG3321	synthase
ATY49_RS19255	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ATY49_RS19270	COG0494	nUDIX hydrolase
ATY49_RS19285	COG1388	LysM domain
ATY49_RS19285	COG4942	peptidase
ATY49_RS19295	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ATY49_RS19310	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ATY49_RS19315	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY49_RS19320	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY49_RS19340	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ATY49_RS19355	COG3116	cell division
ATY49_RS19360	COG0275	rRNA processing
ATY49_RS19395	COG0792	nuclease activity
ATY49_RS19400	COG1988	membrane-bound metal-dependent
ATY49_RS19405	COG0277	FAD linked oxidase domain protein
ATY49_RS19410	COG0745	RESPONSE REGULATOR receiver
ATY49_RS19415	COG2205	protein histidine kinase activity
ATY49_RS19425	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ATY49_RS19430	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ATY49_RS19455	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ATY49_RS19460	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY49_RS19465	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ATY49_RS19485	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY49_RS19485	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY49_RS19505	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ATY49_RS19525	COG0488	(ABC) transporter
ATY49_RS19550	COG3791	Glutathione-dependent formaldehyde-activating
ATY49_RS19575	COG2205	protein histidine kinase activity
ATY49_RS19625	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ATY49_RS19650	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ATY49_RS19660	COG2963	transposase activity
ATY49_RS19665	COG3039	Transposase
ATY49_RS19670	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY49_RS19675	COG3293	Transposase
ATY49_RS19685	COG3039	Transposase
ATY49_RS19725	COG3039	Transposase
ATY49_RS19735	COG3293	Transposase
ATY49_RS19770	COG0726	polysaccharide deacetylase
ATY49_RS19770	COG1649	PFAM Uncharacterised BCR, COG1649
ATY49_RS19775	COG1215	transferase activity, transferring glycosyl groups
ATY49_RS19785	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ATY49_RS19790	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY49_RS19795	COG1609	Transcriptional regulator
ATY49_RS19805	COG2188	Transcriptional regulator
ATY49_RS19820	COG3250	beta-galactosidase activity
ATY49_RS19855	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ATY49_RS19860	COG4191	Histidine kinase
ATY49_RS19865	COG0784	Response regulator, receiver
ATY49_RS19870	COG4251	negative regulation of phosphorylation
ATY49_RS19875	COG2823	Periplasmic or secreted lipoprotein
ATY49_RS19880	COG0673	inositol 2-dehydrogenase activity
ATY49_RS19885	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ATY49_RS19925	COG1056	cytidyltransferase-related domain
ATY49_RS19925	COG1051	belongs to the nudix hydrolase family
ATY49_RS19950	COG2921	Belongs to the UPF0250 family
ATY49_RS19960	COG1686	Belongs to the peptidase S11 family
ATY49_RS19970	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ATY49_RS19975	COG2951	lytic endotransglycosylase activity
ATY49_RS20010	COG0772	Belongs to the SEDS family
ATY49_RS20025	COG1792	Involved in formation and maintenance of cell shape
ATY49_RS20030	COG1077	Cell shape determining protein MreB Mrl
ATY49_RS20035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY49_RS20080	COG2199	diguanylate cyclase activity
ATY49_RS20085	COG0308	aminopeptidase N
ATY49_RS20115	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ATY49_RS20145	COG0436	Aminotransferase
ATY49_RS20160	COG1505	serine-type exopeptidase activity
ATY49_RS20185	COG0181	hydroxymethylbilane synthase activity
ATY49_RS20195	COG3275	phosphorelay sensor kinase activity
ATY49_RS20230	COG0659	secondary active sulfate transmembrane transporter activity
ATY49_RS20235	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY49_RS20235	COG5297	Belongs to the glycosyl hydrolase family 6
ATY49_RS20245	COG0840	transmembrane signaling receptor activity
ATY49_RS20280	COG3293	Transposase
ATY49_RS20320	COG0598	Magnesium transport protein CorA
ATY49_RS20330	COG1113	amino acid transport
ATY49_RS20335	COG5297	Belongs to the glycosyl hydrolase family 6
ATY49_RS20340	COG4305	rare lipoprotein A
ATY49_RS20345	COG0697	spore germination
ATY49_RS20415	COG4221	oxidoreductase activity
ATY49_RS20430	COG2963	transposase activity
ATY49_RS20450	COG0456	acetyltransferase
ATY49_RS20460	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ATY49_RS20490	COG3227	Zinc metalloprotease (Elastase)
ATY49_RS20505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY49_RS20505	COG2111	Na H antiporter
ATY49_RS20510	COG1006	Multisubunit Na H antiporter MnhC subunit
ATY49_RS20515	COG0651	ATP synthesis coupled electron transport
ATY49_RS20525	COG2212	antiporter activity
ATY49_RS20530	COG1320	monovalent cation:proton antiporter activity
ATY49_RS20535	COG3293	Transposase
ATY49_RS20545	COG3039	Transposase
ATY49_RS20550	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ATY49_RS20570	COG3104	oligopeptide transport
ATY49_RS20575	COG3483	tryptophan 2,3-dioxygenase activity
ATY49_RS20585	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ATY49_RS20600	COG0022	dehydrogenase e1 component
ATY49_RS20615	COG3293	Transposase
ATY49_RS20625	COG0183	Belongs to the thiolase family
ATY49_RS20675	COG3039	Transposase
ATY49_RS20705	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ATY49_RS20720	COG3023	N-Acetylmuramoyl-L-alanine amidase
ATY49_RS20730	COG4948	Mandelate Racemase Muconate Lactonizing
ATY49_RS20765	COG3293	Transposase
ATY49_RS20775	COG0531	amino acid
ATY49_RS20790	COG3293	Transposase
ATY49_RS20810	COG4682	membrane
ATY49_RS20815	COG3039	Transposase
ATY49_RS20825	COG2133	pyrroloquinoline quinone binding
ATY49_RS20855	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS20865	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ATY49_RS20870	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ATY49_RS20880	COG1610	YqeY-like protein
ATY49_RS20890	COG1295	ribonuclease BN
ATY49_RS20895	COG0358	DNA primase activity
ATY49_RS20955	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
ATY49_RS20965	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ATY49_RS20980	COG2963	transposase activity
ATY49_RS21020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ATY49_RS21025	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ATY49_RS21030	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ATY49_RS21040	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ATY49_RS21045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY49_RS21060	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ATY49_RS21085	COG2963	transposase activity
ATY49_RS21090	COG2801	Transposase and inactivated derivatives
ATY49_RS21145	COG3039	Transposase
ATY49_RS21155	COG3328	transposase activity
ATY49_RS21160	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY49_RS21160	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY49_RS21170	COG1473	amidohydrolase
ATY49_RS21175	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY49_RS21180	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY49_RS21190	COG5383	Protein conserved in bacteria
ATY49_RS21220	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATY49_RS21225	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ATY49_RS21240	COG0028	Belongs to the TPP enzyme family
ATY49_RS21245	COG4191	Histidine kinase
ATY49_RS21270	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ATY49_RS21285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY49_RS21290	COG3177	Filamentation induced by cAMP protein fic
ATY49_RS21305	COG0596	Alpha beta hydrolase
ATY49_RS21310	COG0727	PFAM Uncharacterised protein family (UPF0153)
ATY49_RS21315	COG0318	PFAM AMP-dependent synthetase and ligase
ATY49_RS21320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATY49_RS21375	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ATY49_RS21385	COG0129	dihydroxy-acid dehydratase activity
ATY49_RS21405	COG3039	Transposase
ATY49_RS21415	COG0408	coproporphyrinogen oxidase activity
ATY49_RS21430	COG2801	Transposase and inactivated derivatives
ATY49_RS21435	COG2963	transposase activity
ATY49_RS21520	COG2353	YceI-like domain
ATY49_RS21555	COG3039	Transposase
ATY49_RS21560	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY49_RS21575	COG3386	PFAM SMP-30 Gluconolaconase
ATY49_RS21620	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ATY49_RS21635	COG4771	TonB-dependent receptor
ATY49_RS21645	COG0459	protein refolding
ATY49_RS21680	COG1252	NADH dehydrogenase
ATY49_RS21690	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY49_RS21695	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ATY49_RS21700	COG2201	protein-glutamate methylesterase activity
ATY49_RS21705	COG2177	Part of the ABC transporter FtsEX involved in
ATY49_RS21710	COG2884	Cell division ATP-binding protein ftsE
ATY49_RS21720	COG3118	belongs to the thioredoxin family
ATY49_RS21725	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ATY49_RS21735	COG2963	transposase activity
ATY49_RS21745	COG0729	surface antigen
ATY49_RS21750	COG2911	Protein conserved in bacteria
ATY49_RS21785	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY49_RS21800	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY49_RS21855	COG1733	regulation of RNA biosynthetic process
ATY49_RS21860	COG0702	epimerase
ATY49_RS21890	COG0583	DNA-binding transcription factor activity
ATY49_RS21895	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY49_RS21910	COG2205	protein histidine kinase activity
ATY49_RS21915	COG2205	protein histidine kinase activity
ATY49_RS21920	COG0745	RESPONSE REGULATOR receiver
ATY49_RS21950	COG1902	pentaerythritol trinitrate reductase activity
ATY49_RS21955	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ATY49_RS21965	COG2814	Major facilitator Superfamily
ATY49_RS21970	COG0583	DNA-binding transcription factor activity
ATY49_RS21985	COG0084	hydrolase, TatD family'
ATY49_RS22020	COG3293	Transposase
ATY49_RS22040	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ATY49_RS22060	COG2351	hydroxyisourate hydrolase activity
ATY49_RS22100	COG3293	Transposase
ATY49_RS22110	COG2826	transposase and inactivated derivatives, IS30 family
ATY49_RS22120	COG4770	biotin carboxylase activity
ATY49_RS22125	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ATY49_RS22130	COG1960	acyl-CoA dehydrogenase activity
ATY49_RS22190	COG0523	cobalamin synthesis protein
ATY49_RS22200	COG0697	spore germination
ATY49_RS22210	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ATY49_RS22225	COG4771	TonB-dependent receptor
ATY49_RS22230	COG0457	Tetratricopeptide repeat
ATY49_RS22245	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY49_RS22260	COG0519	Catalyzes the synthesis of GMP from XMP
ATY49_RS22260	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ATY49_RS22270	COG0805	protein transport
ATY49_RS22280	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATY49_RS22290	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATY49_RS22335	COG3661	Belongs to the glycosyl hydrolase 67 family
ATY49_RS22345	COG4948	Mandelate Racemase Muconate Lactonizing
ATY49_RS22355	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY49_RS22360	COG0246	Mannitol dehydrogenase
ATY49_RS22385	COG3693	PFAM glycoside hydrolase, family 10
ATY49_RS22390	COG3693	PFAM glycoside hydrolase, family 10
ATY49_RS22410	COG2211	Major facilitator Superfamily
ATY49_RS22450	COG3293	Transposase
ATY49_RS22460	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ATY49_RS22515	COG1846	Transcriptional regulator
ATY49_RS22520	COG1764	response to oxidative stress
ATY49_RS22605	COG3549	Plasmid maintenance system killer
ATY49_RS22615	COG1074	ATP-dependent DNA helicase activity
ATY49_RS22620	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ATY49_RS22660	COG2032	superoxide dismutase activity
ATY49_RS22665	COG2032	superoxide dismutase activity
ATY49_RS22670	COG2204	response regulator
ATY49_RS22675	COG3852	Histidine kinase
ATY49_RS22680	COG0004	ammonium transporteR
ATY49_RS22685	COG0347	Belongs to the P(II) protein family
ATY49_RS22690	COG0174	glutamine synthetase
ATY49_RS22695	COG1968	undecaprenyl-diphosphatase activity
ATY49_RS22740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY49_RS22750	COG2062	phosphohistidine phosphatase, SixA
ATY49_RS22755	COG0489	protein tyrosine kinase activity
ATY49_RS22775	COG1396	sequence-specific DNA binding
ATY49_RS22780	COG3550	peptidyl-serine autophosphorylation
ATY49_RS22785	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ATY49_RS22790	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY49_RS22805	COG1125	glycine betaine transport
ATY49_RS22805	COG0517	IMP dehydrogenase activity
ATY49_RS22820	COG1119	ATPase activity
ATY49_RS22830	COG1752	Esterase of the alpha-beta hydrolase superfamily
ATY49_RS22845	COG3039	Transposase
ATY49_RS22855	COG2963	transposase activity
ATY49_RS22870	COG0656	L-ascorbic acid biosynthetic process
ATY49_RS22875	COG2130	NADP-dependent
ATY49_RS22880	COG0667	Aldo Keto reductase
ATY49_RS22890	COG1187	pseudouridine synthase activity
ATY49_RS22905	COG1643	Atp-dependent helicase
ATY49_RS22910	COG4807	Protein conserved in bacteria
ATY49_RS22915	COG4948	Mandelate Racemase Muconate Lactonizing
ATY49_RS22920	COG0179	Fumarylacetoacetate (FAA) hydrolase
ATY49_RS22925	COG1028	Short-chain dehydrogenase reductase Sdr
ATY49_RS22945	COG3507	Belongs to the glycosyl hydrolase 43 family
ATY49_RS22990	COG3162	membrane
ATY49_RS22995	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATY49_RS23010	COG0708	Exodeoxyribonuclease III
ATY49_RS23025	COG2091	lysine biosynthetic process via aminoadipic acid
ATY49_RS23035	COG3540	Alkaline phosphatase
ATY49_RS23065	COG2159	amidohydrolase
ATY49_RS23075	COG2159	amidohydrolase
ATY49_RS23085	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY49_RS23090	COG0583	DNA-binding transcription factor activity
ATY49_RS23095	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY49_RS23110	COG0210	DNA helicase
ATY49_RS23125	COG0531	amino acid
ATY49_RS23130	COG1322	Protein conserved in bacteria
ATY49_RS23140	COG0386	Belongs to the glutathione peroxidase family
ATY49_RS23200	COG0793	Belongs to the peptidase S41A family
ATY49_RS23205	COG4942	peptidase
ATY49_RS23215	COG2234	aminopeptidase activity
ATY49_RS23265	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATY49_RS23270	COG0302	gtp cyclohydrolase
ATY49_RS23295	COG0477	Major facilitator Superfamily
ATY49_RS23375	COG1929	Belongs to the glycerate kinase type-1 family
ATY49_RS23380	COG2271	Major facilitator Superfamily
ATY49_RS23395	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY49_RS23400	COG0861	Integral membrane protein TerC family
ATY49_RS23410	COG0584	glycerophosphoryl diester phosphodiesterase
ATY49_RS23420	COG0671	phosphoesterase, PA-phosphatase related
ATY49_RS23430	COG0726	polysaccharide deacetylase