locus-tag	class	description
ATY42_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ATY42_RS00020	COG0187	DNA topoisomerase II activity
ATY42_RS00030	COG0501	Belongs to the peptidase M48B family
ATY42_RS00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY42_RS00080	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ATY42_RS00090	COG4772	TonB-dependent receptor
ATY42_RS00105	COG3039	Transposase
ATY42_RS00110	COG1304	FMN binding
ATY42_RS00115	COG1755	Isoprenylcysteine carboxyl methyltransferase
ATY42_RS00135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY42_RS00150	COG3039	Transposase
ATY42_RS00165	COG1116	anion transmembrane transporter activity
ATY42_RS00185	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY42_RS00205	COG3039	Transposase
ATY42_RS00215	COG0513	Belongs to the DEAD box helicase family
ATY42_RS00250	COG3039	Transposase
ATY42_RS00300	COG1858	cytochrome C peroxidase
ATY42_RS00310	COG0702	epimerase
ATY42_RS00335	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ATY42_RS00355	COG1649	PFAM Uncharacterised BCR, COG1649
ATY42_RS00360	COG2354	Protein conserved in bacteria
ATY42_RS00365	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY42_RS00375	COG3293	Transposase
ATY42_RS00385	COG3264	Mechanosensitive ion channel
ATY42_RS00385	COG1511	domain protein
ATY42_RS00465	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ATY42_RS00570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATY42_RS00580	COG0642	Histidine kinase
ATY42_RS00585	COG1090	epimerase
ATY42_RS00595	COG3039	Transposase
ATY42_RS00620	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS00670	COG3039	Transposase
ATY42_RS00675	COG1136	(ABC) transporter
ATY42_RS00690	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS00715	COG1272	protein, Hemolysin III
ATY42_RS00720	COG1205	dead DEAH box helicase
ATY42_RS00720	COG1111	helicase
ATY42_RS00775	COG0070	glutamate synthase
ATY42_RS00775	COG0067	glutamate synthase
ATY42_RS00775	COG0069	glutamate synthase activity
ATY42_RS00780	COG0493	'glutamate synthase
ATY42_RS00800	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS00825	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ATY42_RS00830	COG1609	Transcriptional regulator
ATY42_RS00855	COG0366	Alpha amylase catalytic
ATY42_RS00860	COG0366	Alpha amylase catalytic
ATY42_RS00865	COG2801	Transposase and inactivated derivatives
ATY42_RS00880	COG3328	transposase activity
ATY42_RS00910	COG0606	chelatase, subunit chli
ATY42_RS00945	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ATY42_RS00950	COG1166	arginine decarboxylase activity
ATY42_RS01000	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY42_RS01025	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS01040	COG2801	Transposase and inactivated derivatives
ATY42_RS01050	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ATY42_RS01065	COG0210	DNA helicase
ATY42_RS01080	COG3132	Protein of unknown function, DUF480
ATY42_RS01085	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
ATY42_RS01090	COG0284	orotidine-5'-phosphate decarboxylase activity
ATY42_RS01120	COG2937	Belongs to the GPAT DAPAT family
ATY42_RS01140	COG2963	transposase activity
ATY42_RS01155	COG2755	lipolytic protein G-D-S-L family
ATY42_RS01165	COG3186	Phenylalanine-4-hydroxylase
ATY42_RS01170	COG1522	sequence-specific DNA binding
ATY42_RS01185	COG4773	Receptor
ATY42_RS01190	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS01225	COG1064	alcohol dehydrogenase
ATY42_RS01230	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY42_RS01235	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY42_RS01245	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY42_RS01250	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS01275	COG3039	Transposase
ATY42_RS01280	COG0676	glucose-6-phosphate 1-epimerase activity
ATY42_RS01300	COG3135	benzoate transporter
ATY42_RS01305	COG3135	benzoate transporter
ATY42_RS01340	COG2963	transposase activity
ATY42_RS01350	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ATY42_RS01360	COG3293	Transposase
ATY42_RS01380	COG2853	Lipoprotein
ATY42_RS01395	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY42_RS01400	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY42_RS01405	COG1127	ABC transporter
ATY42_RS01435	COG3293	Transposase
ATY42_RS01465	COG2801	Transposase and inactivated derivatives
ATY42_RS01470	COG2963	transposase activity
ATY42_RS01490	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY42_RS01495	COG3293	Transposase
ATY42_RS01505	COG3265	gluconokinase activity
ATY42_RS01510	COG2211	Major facilitator Superfamily
ATY42_RS01515	COG3459	Glycosyltransferase 36 associated
ATY42_RS01530	COG2205	protein histidine kinase activity
ATY42_RS01540	COG1414	Transcriptional regulator
ATY42_RS01545	COG0738	Major facilitator superfamily
ATY42_RS01550	COG3254	rhamnose metabolic process
ATY42_RS01575	COG0339	signal peptide processing
ATY42_RS01600	COG0564	pseudouridine synthase activity
ATY42_RS01610	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ATY42_RS01625	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY42_RS01660	COG3293	Transposase
ATY42_RS01665	COG2963	transposase activity
ATY42_RS01710	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ATY42_RS01720	COG0842	Transport permease protein
ATY42_RS01725	COG1131	(ABC) transporter
ATY42_RS01730	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ATY42_RS01750	COG1476	TRANSCRIPTIONal
ATY42_RS01760	COG4555	ABC transporter
ATY42_RS01795	COG0625	glutathione transferase activity
ATY42_RS01840	COG0583	DNA-binding transcription factor activity
ATY42_RS01875	COG1199	ATP-dependent helicase activity
ATY42_RS01895	COG1566	PFAM secretion protein HlyD family protein
ATY42_RS01920	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY42_RS01960	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ATY42_RS01960	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ATY42_RS01965	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ATY42_RS01980	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ATY42_RS02015	COG3237	CsbD-like
ATY42_RS02020	COG0180	Tryptophanyl-tRNA synthetase
ATY42_RS02025	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY42_RS02075	COG0753	catalase activity
ATY42_RS02080	COG1595	DNA-templated transcription, initiation
ATY42_RS02090	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY42_RS02100	COG0628	permease
ATY42_RS02110	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ATY42_RS02115	COG1040	competence protein
ATY42_RS02120	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ATY42_RS02125	COG0156	8-amino-7-oxononanoate synthase activity
ATY42_RS02135	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS02150	COG0463	Glycosyl transferase, family 2
ATY42_RS02160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATY42_RS02165	COG3100	YcgL domain-containing protein
ATY42_RS02180	COG3387	PFAM Glycoside hydrolase 15-related
ATY42_RS02185	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY42_RS02200	COG2239	Acts as a magnesium transporter
ATY42_RS02210	COG1042	CoA-binding domain protein
ATY42_RS02210	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ATY42_RS02210	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY42_RS02220	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY42_RS02225	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATY42_RS02245	COG2963	transposase activity
ATY42_RS02255	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ATY42_RS02265	COG3485	protocatechuate 3,4-dioxygenase
ATY42_RS02270	COG3485	protocatechuate 3,4-dioxygenase
ATY42_RS02280	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ATY42_RS02285	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY42_RS02290	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATY42_RS02300	COG1414	Transcriptional regulator
ATY42_RS02310	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS02315	COG4221	oxidoreductase activity
ATY42_RS02330	COG0018	arginyl-trna synthetase
ATY42_RS02335	COG2003	Belongs to the UPF0758 family
ATY42_RS02340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ATY42_RS02365	COG0463	Glycosyl transferase, family 2
ATY42_RS02380	COG1475	DNA binding
ATY42_RS02385	COG1192	Involved in chromosome partitioning
ATY42_RS02400	COG0708	Exodeoxyribonuclease III
ATY42_RS02405	COG2211	Major facilitator Superfamily
ATY42_RS02420	COG0739	heme binding
ATY42_RS02460	COG2963	transposase activity
ATY42_RS02470	COG0745	RESPONSE REGULATOR receiver
ATY42_RS02495	COG3293	Transposase
ATY42_RS02520	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ATY42_RS02540	COG2814	Major facilitator Superfamily
ATY42_RS02555	COG1289	transmembrane transporter activity
ATY42_RS02565	COG0577	efflux transmembrane transporter activity
ATY42_RS02565	COG1136	(ABC) transporter
ATY42_RS02570	COG0151	Belongs to the GarS family
ATY42_RS02585	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ATY42_RS02590	COG2267	carboxylic ester hydrolase activity
ATY42_RS02600	COG2267	carboxylic ester hydrolase activity
ATY42_RS02605	COG2453	phosphatase
ATY42_RS02605	COG0671	phosphoesterase, PA-phosphatase related
ATY42_RS02615	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ATY42_RS02655	COG0439	Biotin carboxylase
ATY42_RS02665	COG0511	ligase activity, forming carbon-carbon bonds
ATY42_RS02670	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ATY42_RS02685	COG1324	tolerance protein
ATY42_RS02710	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ATY42_RS02735	COG0534	Mate efflux family protein
ATY42_RS02740	COG0616	signal peptide processing
ATY42_RS02750	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS02765	COG0009	L-threonylcarbamoyladenylate synthase
ATY42_RS02770	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ATY42_RS02770	COG1754	DNA topoisomerase type I activity
ATY42_RS02785	COG2922	Belongs to the Smg family
ATY42_RS02790	COG0758	DNA mediated transformation
ATY42_RS02795	COG1652	LysM domain
ATY42_RS02800	COG0242	peptide deformylase activity
ATY42_RS02805	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ATY42_RS02810	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY42_RS02810	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ATY42_RS02860	COG1560	Kdo2-lipid A biosynthetic process
ATY42_RS02870	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY42_RS03070	COG1063	alcohol dehydrogenase
ATY42_RS03080	COG1294	oxidase, subunit
ATY42_RS03085	COG1271	oxidase subunit
ATY42_RS03090	COG2204	response regulator
ATY42_RS03125	COG2972	Histidine kinase
ATY42_RS03130	COG3279	Response regulator of the LytR AlgR family
ATY42_RS03135	COG3279	Response regulator of the LytR AlgR family
ATY42_RS03145	COG0531	amino acid
ATY42_RS03165	COG3590	peptidase
ATY42_RS03180	COG0667	Aldo Keto reductase
ATY42_RS03195	COG3384	dioxygenase
ATY42_RS03205	COG1573	uracil-dna glycosylase
ATY42_RS03215	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
ATY42_RS03230	COG0025	NhaP-type Na H and K H
ATY42_RS03235	COG1131	(ABC) transporter
ATY42_RS03240	COG0842	Transport permease protein
ATY42_RS03260	COG1404	Belongs to the peptidase S8 family
ATY42_RS03275	COG0745	RESPONSE REGULATOR receiver
ATY42_RS03325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY42_RS03350	COG2202	Pas domain
ATY42_RS03350	COG2205	protein histidine kinase activity
ATY42_RS03385	COG2813	Specifically methylates the guanine in position
ATY42_RS03390	COG1187	pseudouridine synthase activity
ATY42_RS03395	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ATY42_RS03430	COG0697	spore germination
ATY42_RS03440	COG2011	ABC-type metal ion transport system permease component
ATY42_RS03470	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATY42_RS03480	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATY42_RS03500	COG0356	it plays a direct role in the translocation of protons across the membrane
ATY42_RS03510	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ATY42_RS03520	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ATY42_RS03525	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ATY42_RS03530	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ATY42_RS03535	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ATY42_RS03585	COG3842	ATPase activity
ATY42_RS03590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY42_RS03595	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY42_RS03610	COG3293	Transposase
ATY42_RS03655	COG0339	signal peptide processing
ATY42_RS03690	COG1956	GAF domain-containing protein
ATY42_RS03695	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ATY42_RS03705	COG0720	synthase
ATY42_RS03715	COG0513	Belongs to the DEAD box helicase family
ATY42_RS03755	COG0626	cystathionine gamma-synthase activity
ATY42_RS03795	COG3328	transposase activity
ATY42_RS03820	COG2086	electron transfer activity
ATY42_RS03845	COG0662	Cupin 2, conserved barrel domain protein
ATY42_RS03845	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ATY42_RS03850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY42_RS03885	COG3218	ABC-type transport auxiliary lipoprotein component
ATY42_RS03885	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ATY42_RS03890	COG1127	ABC transporter
ATY42_RS03895	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATY42_RS03910	COG0442	prolyl-tRNA aminoacylation
ATY42_RS03920	COG1183	phosphatidylcholine synthase activity
ATY42_RS03945	COG3039	Transposase
ATY42_RS03985	COG2801	Transposase and inactivated derivatives
ATY42_RS03990	COG2963	transposase activity
ATY42_RS04000	COG0525	valine-tRNA ligase activity
ATY42_RS04015	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATY42_RS04025	COG0795	lipopolysaccharide-transporting ATPase activity
ATY42_RS04035	COG4974	Belongs to the 'phage' integrase family
ATY42_RS04040	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ATY42_RS04045	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ATY42_RS04045	COG0047	phosphoribosylformylglycinamidine synthase activity
ATY42_RS04050	COG5295	Hep Hag repeat protein
ATY42_RS04070	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY42_RS04080	COG1459	type II secretion system
ATY42_RS04085	COG2165	general secretion pathway protein
ATY42_RS04090	COG4970	Tfp pilus assembly protein FimT
ATY42_RS04095	COG2165	general secretion pathway protein
ATY42_RS04100	COG4795	General secretion pathway protein
ATY42_RS04105	COG3156	type II secretion system protein K
ATY42_RS04110	COG3166	PFAM Fimbrial assembly family protein
ATY42_RS04125	COG1450	Type ii and iii secretion system protein
ATY42_RS04140	COG2188	Transcriptional regulator
ATY42_RS04180	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ATY42_RS04185	COG1518	maintenance of DNA repeat elements
ATY42_RS04225	COG1399	metal-binding, possibly nucleic acid-binding protein
ATY42_RS04250	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS04255	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY42_RS04265	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ATY42_RS04270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ATY42_RS04295	COG3829	transcription factor binding
ATY42_RS04320	COG3039	Transposase
ATY42_RS04365	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS04375	COG0678	peroxiredoxin activity
ATY42_RS04395	COG0330	HflC and HflK could
ATY42_RS04400	COG0330	HflC and HflK could
ATY42_RS04415	COG0308	aminopeptidase N
ATY42_RS04440	COG3039	Transposase
ATY42_RS04460	COG1560	Kdo2-lipid A biosynthetic process
ATY42_RS04465	COG1519	Transferase
ATY42_RS04470	COG1538	Outer membrane efflux protein
ATY42_RS04475	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY42_RS04505	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ATY42_RS04510	COG0066	3-isopropylmalate dehydratase activity
ATY42_RS04545	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ATY42_RS04555	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ATY42_RS04560	COG3710	Transcriptional regulator
ATY42_RS04585	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ATY42_RS04625	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY42_RS04635	COG3781	membrane
ATY42_RS04650	COG0625	glutathione transferase activity
ATY42_RS04660	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ATY42_RS04665	COG1217	gtp-binding protein TYPA
ATY42_RS04685	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ATY42_RS04705	COG2963	transposase activity
ATY42_RS04710	COG2801	Transposase and inactivated derivatives
ATY42_RS04755	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS04785	COG2963	transposase activity
ATY42_RS04815	COG3293	Transposase
ATY42_RS04835	COG3039	Transposase
ATY42_RS04855	COG3293	Transposase
ATY42_RS04860	COG0584	glycerophosphoryl diester phosphodiesterase
ATY42_RS04885	COG0473	3-isopropylmalate dehydrogenase activity
ATY42_RS04915	COG2963	transposase activity
ATY42_RS04940	COG0544	peptidyl-prolyl cis-trans isomerase activity
ATY42_RS04980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ATY42_RS05005	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY42_RS05015	COG0631	protein serine/threonine phosphatase activity
ATY42_RS05080	COG0582	viral genome integration into host DNA
ATY42_RS05090	COG0859	PFAM glycosyl transferase family 9
ATY42_RS05095	COG3642	lipopolysaccharide core region biosynthetic process
ATY42_RS05100	COG1234	tRNA 3'-trailer cleavage
ATY42_RS05105	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ATY42_RS05115	COG0315	cyclic pyranopterin monophosphate synthase activity
ATY42_RS05120	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ATY42_RS05125	COG0314	molybdopterin synthase activity
ATY42_RS05155	COG0537	adenosine 5'-monophosphoramidase activity
ATY42_RS05175	COG0714	Associated with various cellular activities
ATY42_RS05195	COG0242	peptide deformylase activity
ATY42_RS05240	COG3039	Transposase
ATY42_RS05260	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY42_RS05265	COG0726	polysaccharide deacetylase
ATY42_RS05315	COG2211	Major facilitator Superfamily
ATY42_RS05325	COG1609	Transcriptional regulator
ATY42_RS05330	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS05335	COG2851	Citrate transporter
ATY42_RS05350	COG0642	Histidine kinase
ATY42_RS05360	COG2197	response regulator
ATY42_RS05385	COG0583	DNA-binding transcription factor activity
ATY42_RS05400	COG4191	Histidine kinase
ATY42_RS05420	COG0281	malic enzyme
ATY42_RS05420	COG0280	phosphate acetyltransferase
ATY42_RS05430	COG2963	transposase activity
ATY42_RS05435	COG2801	Transposase and inactivated derivatives
ATY42_RS05460	COG0352	thiamine-phosphate diphosphorylase activity
ATY42_RS05465	COG1773	rubredoxin
ATY42_RS05470	COG2912	Transglutaminase-like superfamily
ATY42_RS05490	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ATY42_RS05515	COG0006	proline dipeptidase activity
ATY42_RS05530	COG3293	Transposase
ATY42_RS05555	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ATY42_RS05570	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ATY42_RS05575	COG1561	YicC-like family, N-terminal region
ATY42_RS05600	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY42_RS05610	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ATY42_RS05640	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ATY42_RS05685	COG0714	Associated with various cellular activities
ATY42_RS05705	COG2304	oxidoreductase activity
ATY42_RS05725	COG1301	dicarboxylic acid transport
ATY42_RS05730	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ATY42_RS05735	COG4773	Receptor
ATY42_RS05740	COG0739	heme binding
ATY42_RS05745	COG1376	ErfK ybiS ycfS ynhG family protein
ATY42_RS05770	COG1022	Amp-dependent synthetase and ligase
ATY42_RS05780	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS05795	COG0642	Histidine kinase
ATY42_RS05815	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ATY42_RS05820	COG4149	molybdate abc transporter
ATY42_RS05825	COG0725	ABC transporter, periplasmic molybdate-binding protein
ATY42_RS05830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATY42_RS05830	COG3453	Protein conserved in bacteria
ATY42_RS05865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ATY42_RS05870	COG3293	Transposase
ATY42_RS05885	COG2205	protein histidine kinase activity
ATY42_RS05890	COG0745	RESPONSE REGULATOR receiver
ATY42_RS05940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY42_RS05945	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATY42_RS05980	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ATY42_RS06000	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATY42_RS06055	COG2201	protein-glutamate methylesterase activity
ATY42_RS06090	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ATY42_RS06100	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ATY42_RS06105	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ATY42_RS06120	COG1842	Phage shock protein A
ATY42_RS06145	COG0754	glutathionylspermidine amidase activity
ATY42_RS06215	COG0531	amino acid
ATY42_RS06220	COG2197	response regulator
ATY42_RS06235	COG1113	amino acid transport
ATY42_RS06245	COG1271	oxidase subunit
ATY42_RS06250	COG1294	oxidase, subunit
ATY42_RS06260	COG2239	Acts as a magnesium transporter
ATY42_RS06265	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY42_RS06270	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY42_RS06280	COG1660	Displays ATPase and GTPase activities
ATY42_RS06285	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ATY42_RS06290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY42_RS06305	COG1137	ATPase activity
ATY42_RS06310	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ATY42_RS06320	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ATY42_RS06330	COG0271	Belongs to the BolA IbaG family
ATY42_RS06335	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ATY42_RS06355	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ATY42_RS06370	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ATY42_RS06380	COG0628	permease
ATY42_RS06390	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ATY42_RS06395	COG3178	'Phosphotransferase
ATY42_RS06415	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY42_RS06420	COG1555	photosystem II stabilization
ATY42_RS06475	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY42_RS06485	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ATY42_RS06510	COG0228	four-way junction DNA binding
ATY42_RS06515	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ATY42_RS06520	COG0336	Belongs to the RNA methyltransferase TrmD family
ATY42_RS06535	COG0534	Mate efflux family protein
ATY42_RS06565	COG0542	response to heat
ATY42_RS06580	COG2963	transposase activity
ATY42_RS06595	COG4206	TonB-dependent receptor
ATY42_RS06655	COG0019	diaminopimelate decarboxylase activity
ATY42_RS06665	COG2814	Major facilitator Superfamily
ATY42_RS06670	COG4264	IucA IucC family
ATY42_RS06680	COG4772	TonB-dependent receptor
ATY42_RS06690	COG2801	Transposase and inactivated derivatives
ATY42_RS06695	COG4651	solute:proton antiporter activity
ATY42_RS06695	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY42_RS06730	COG0488	(ABC) transporter
ATY42_RS06755	COG2755	lipolytic protein G-D-S-L family
ATY42_RS06755	COG0657	acetylesterase activity
ATY42_RS06780	COG2207	Transcriptional regulator
ATY42_RS06785	COG0326	Molecular chaperone. Has ATPase activity
ATY42_RS06805	COG2963	transposase activity
ATY42_RS06815	COG3328	transposase activity
ATY42_RS06845	COG2801	Transposase and inactivated derivatives
ATY42_RS06850	COG2963	transposase activity
ATY42_RS06855	COG3039	Transposase
ATY42_RS06860	COG2146	nitrite reductase [NAD(P)H] activity
ATY42_RS06870	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ATY42_RS06875	COG0719	Fe-S assembly protein
ATY42_RS06880	COG0396	ATPase activity
ATY42_RS06885	COG0719	Fe-S assembly protein
ATY42_RS06890	COG1959	2 iron, 2 sulfur cluster binding
ATY42_RS06910	COG0693	protein deglycase activity
ATY42_RS06950	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATY42_RS06955	COG3039	Transposase
ATY42_RS06985	COG0519	Catalyzes the synthesis of GMP from XMP
ATY42_RS07000	COG1678	Uncharacterized ACR, COG1678
ATY42_RS07005	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ATY42_RS07020	COG1764	response to oxidative stress
ATY42_RS07030	COG0384	phenazine biosynthesis protein PhzF
ATY42_RS07035	COG0384	phenazine biosynthesis protein PhzF
ATY42_RS07045	COG0527	aspartate kinase activity
ATY42_RS07075	COG0142	geranyltranstransferase activity
ATY42_RS07080	COG0629	single-stranded DNA binding
ATY42_RS07085	COG2203	Gaf domain
ATY42_RS07085	COG3706	GGDEF domain
ATY42_RS07085	COG5001	Diguanylate cyclase
ATY42_RS07085	COG4251	negative regulation of phosphorylation
ATY42_RS07090	COG3321	synthase
ATY42_RS07090	COG0604	alcohol dehydrogenase
ATY42_RS07090	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS07120	COG2879	small protein
ATY42_RS07125	COG1966	Carbon starvation protein
ATY42_RS07130	COG1741	Belongs to the pirin family
ATY42_RS07205	COG1741	Belongs to the pirin family
ATY42_RS07215	COG1515	deoxyribonuclease V activity
ATY42_RS07235	COG3590	peptidase
ATY42_RS07250	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ATY42_RS07255	COG2200	EAL domain
ATY42_RS07255	COG2202	Pas domain
ATY42_RS07255	COG2199	diguanylate cyclase activity
ATY42_RS07260	COG0835	chemotaxis
ATY42_RS07265	COG0840	transmembrane signaling receptor activity
ATY42_RS07270	COG2198	Histidine kinase
ATY42_RS07270	COG0643	Histidine kinase
ATY42_RS07280	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ATY42_RS07290	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ATY42_RS07300	COG2205	protein histidine kinase activity
ATY42_RS07325	COG3039	Transposase
ATY42_RS07345	COG3039	Transposase
ATY42_RS07350	COG3039	Transposase
ATY42_RS07380	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATY42_RS07385	COG0735	belongs to the Fur family
ATY42_RS07430	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ATY42_RS07435	COG0084	hydrolase, TatD family'
ATY42_RS07450	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS07475	COG0367	asparagine synthase
ATY42_RS07485	COG0305	Participates in initiation and elongation during chromosome replication
ATY42_RS07490	COG0415	Belongs to the DNA photolyase family
ATY42_RS07620	COG5001	Diguanylate cyclase
ATY42_RS07620	COG5002	protein histidine kinase activity
ATY42_RS07625	COG1187	pseudouridine synthase activity
ATY42_RS07645	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY42_RS07655	COG0475	glutathione-regulated potassium exporter activity
ATY42_RS07660	COG5000	phosphorelay sensor kinase activity
ATY42_RS07660	COG5002	protein histidine kinase activity
ATY42_RS07665	COG0745	RESPONSE REGULATOR receiver
ATY42_RS07695	COG1132	(ABC) transporter
ATY42_RS07705	COG3293	Transposase
ATY42_RS07715	COG3039	Transposase
ATY42_RS07725	COG3039	Transposase
ATY42_RS07730	COG3209	COG3209 Rhs family protein
ATY42_RS07735	COG3039	Transposase
ATY42_RS07760	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ATY42_RS07770	COG4969	Belongs to the N-Me-Phe pilin family
ATY42_RS07775	COG2194	sulfuric ester hydrolase activity
ATY42_RS07795	COG3039	Transposase
ATY42_RS07805	COG2184	nucleotidyltransferase activity
ATY42_RS07820	COG0045	succinate-CoA ligase (ADP-forming) activity
ATY42_RS07825	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ATY42_RS07835	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ATY42_RS07835	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY42_RS07840	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY42_RS07845	COG0564	pseudouridine synthase activity
ATY42_RS07870	COG3387	PFAM Glycoside hydrolase 15-related
ATY42_RS07875	COG1877	trehalose-phosphatase activity
ATY42_RS07915	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ATY42_RS07935	COG1595	DNA-templated transcription, initiation
ATY42_RS07945	COG1946	Acyl-CoA thioesterase
ATY42_RS07960	COG0824	Thioesterase
ATY42_RS07965	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ATY42_RS07975	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ATY42_RS07980	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ATY42_RS07985	COG0268	Binds directly to 16S ribosomal RNA
ATY42_RS07990	COG0728	peptidoglycan biosynthetic process
ATY42_RS07995	COG0196	riboflavin kinase activity
ATY42_RS08005	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ATY42_RS08010	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ATY42_RS08025	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ATY42_RS08030	COG1845	cytochrome c oxidase, subunit III
ATY42_RS08035	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ATY42_RS08055	COG3209	COG3209 Rhs family protein
ATY42_RS08055	COG3209	COG3209 Rhs family protein
ATY42_RS08065	COG3209	COG3209 Rhs family protein
ATY42_RS08080	COG2963	transposase activity
ATY42_RS08110	COG2801	Transposase and inactivated derivatives
ATY42_RS08115	COG2963	transposase activity
ATY42_RS08135	COG2963	transposase activity
ATY42_RS08200	COG0632	four-way junction helicase activity
ATY42_RS08210	COG2255	four-way junction helicase activity
ATY42_RS08215	COG0824	Thioesterase
ATY42_RS08225	COG0848	biopolymer transport protein
ATY42_RS08240	COG2885	chlorophyll binding
ATY42_RS08250	COG0602	queuosine metabolic process
ATY42_RS08255	COG1187	pseudouridine synthase activity
ATY42_RS08300	COG3293	Transposase
ATY42_RS08315	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ATY42_RS08335	COG0514	ATP-dependent DNA helicase (RecQ)
ATY42_RS08340	COG0783	Belongs to the Dps family
ATY42_RS08345	COG1643	Atp-dependent helicase
ATY42_RS08365	COG0837	glucose binding
ATY42_RS08375	COG3293	Transposase
ATY42_RS08410	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATY42_RS08420	COG1215	transferase activity, transferring glycosyl groups
ATY42_RS08425	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATY42_RS08435	COG1199	ATP-dependent helicase activity
ATY42_RS08445	COG1397	ADP-ribosylglycohydrolase
ATY42_RS08455	COG0189	ligase activity
ATY42_RS08470	COG0835	chemotaxis
ATY42_RS08475	COG0840	transmembrane signaling receptor activity
ATY42_RS08480	COG0784	Response regulator, receiver
ATY42_RS08480	COG2198	Histidine kinase
ATY42_RS08480	COG0643	Histidine kinase
ATY42_RS08510	COG2304	oxidoreductase activity
ATY42_RS08525	COG1446	asparaginase
ATY42_RS08530	COG3142	Participates in the control of copper homeostasis
ATY42_RS08585	COG3537	Alpha-1,2-mannosidase
ATY42_RS08645	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY42_RS08655	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ATY42_RS08665	COG1388	LysM domain
ATY42_RS08665	COG3858	chitin binding
ATY42_RS08680	COG0837	glucose binding
ATY42_RS08685	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ATY42_RS08705	COG3956	TIGRFAM MazG family protein
ATY42_RS08720	COG0330	HflC and HflK could
ATY42_RS08735	COG0509	glycine decarboxylation via glycine cleavage system
ATY42_RS08760	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS08770	COG1309	transcriptional regulator
ATY42_RS08775	COG4771	TonB-dependent receptor
ATY42_RS08785	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ATY42_RS08795	COG0463	Glycosyl transferase, family 2
ATY42_RS08800	COG0517	IMP dehydrogenase activity
ATY42_RS08800	COG0516	GMP reductase activity
ATY42_RS08810	COG1272	protein, Hemolysin III
ATY42_RS08820	COG0739	heme binding
ATY42_RS08825	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY42_RS08830	COG0626	cystathionine gamma-synthase activity
ATY42_RS08840	COG1760	l-serine dehydratase
ATY42_RS08850	COG2353	YceI-like domain
ATY42_RS08860	COG2353	YceI-like domain
ATY42_RS08930	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS08935	COG1024	Enoyl-CoA hydratase
ATY42_RS08955	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY42_RS08955	COG1024	Enoyl-CoA hydratase
ATY42_RS08970	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATY42_RS09000	COG1381	Involved in DNA repair and RecF pathway recombination
ATY42_RS09015	COG2954	triphosphatase activity
ATY42_RS09030	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ATY42_RS09035	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
ATY42_RS09040	COG3046	protein related to deoxyribodipyrimidine photolyase
ATY42_RS09050	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ATY42_RS09055	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ATY42_RS09060	COG1278	Cold shock
ATY42_RS09085	COG1201	RNA secondary structure unwinding
ATY42_RS09090	COG1793	dna ligase
ATY42_RS09100	COG1793	dna ligase
ATY42_RS09100	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ATY42_RS09130	COG0183	Belongs to the thiolase family
ATY42_RS09150	COG1451	nucleotide metabolic process
ATY42_RS09165	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ATY42_RS09205	COG1047	Peptidyl-prolyl cis-trans
ATY42_RS09220	COG2824	Alkylphosphonate utilization operon protein PhnA
ATY42_RS09230	COG1902	pentaerythritol trinitrate reductase activity
ATY42_RS09235	COG2814	Major facilitator Superfamily
ATY42_RS09285	COG3293	Transposase
ATY42_RS09290	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ATY42_RS09290	COG0392	lysyltransferase activity
ATY42_RS09300	COG0251	oxidation-reduction process
ATY42_RS09305	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY42_RS09320	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ATY42_RS09345	COG1595	DNA-templated transcription, initiation
ATY42_RS09365	COG2878	Part of a membrane complex involved in electron transport
ATY42_RS09375	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY42_RS09375	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATY42_RS09385	COG0346	lactoylglutathione lyase activity
ATY42_RS09395	COG0833	amino acid
ATY42_RS09400	COG2040	homocysteine
ATY42_RS09415	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY42_RS09445	COG0529	Catalyzes the synthesis of activated sulfate
ATY42_RS09445	COG2895	sulfate adenylyltransferase (ATP) activity
ATY42_RS09485	COG1981	membrane
ATY42_RS09510	COG1131	(ABC) transporter
ATY42_RS09515	COG4771	TonB-dependent receptor
ATY42_RS09525	COG0825	malonyl-CoA metabolic process
ATY42_RS09545	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY42_RS09550	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY42_RS09565	COG0750	zinc metalloprotease
ATY42_RS09575	COG0575	Belongs to the CDS family
ATY42_RS09585	COG0233	cytoplasmic translational termination
ATY42_RS09600	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATY42_RS09660	COG1393	Belongs to the ArsC family
ATY42_RS09675	COG0367	asparagine synthase
ATY42_RS09690	COG4774	siderophore transport
ATY42_RS09725	COG1566	PFAM secretion protein HlyD family protein
ATY42_RS09730	COG2814	Major facilitator Superfamily
ATY42_RS09765	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS09785	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ATY42_RS09795	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS09825	COG2914	Belongs to the UPF0125 (RnfH) family
ATY42_RS09830	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY42_RS09840	COG0497	DNA recombination
ATY42_RS09850	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ATY42_RS09855	COG0443	Heat shock 70 kDa protein
ATY42_RS09860	COG0484	heat shock protein binding
ATY42_RS09865	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ATY42_RS09870	COG1605	Chorismate mutase
ATY42_RS09870	COG0287	Prephenate dehydrogenase
ATY42_RS09885	COG0583	DNA-binding transcription factor activity
ATY42_RS09895	COG1132	(ABC) transporter
ATY42_RS09930	COG2850	peptidyl-arginine hydroxylation
ATY42_RS09970	COG3293	Transposase
ATY42_RS09980	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS10020	COG1131	(ABC) transporter
ATY42_RS10025	COG1725	Transcriptional regulator
ATY42_RS10030	COG0386	Belongs to the glutathione peroxidase family
ATY42_RS10045	COG2900	Belongs to the SlyX family
ATY42_RS10060	COG1609	Transcriptional regulator
ATY42_RS10070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY42_RS10080	COG0646	methionine synthase
ATY42_RS10080	COG1410	methionine synthase
ATY42_RS10085	COG1410	methionine synthase
ATY42_RS10085	COG0646	methionine synthase
ATY42_RS10090	COG2226	methyltransferase
ATY42_RS10095	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS10120	COG0557	exoribonuclease II activity
ATY42_RS10145	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY42_RS10155	COG3039	Transposase
ATY42_RS10170	COG3328	transposase activity
ATY42_RS10180	COG1278	Cold shock
ATY42_RS10195	COG3039	Transposase
ATY42_RS10205	COG3039	Transposase
ATY42_RS10250	COG3039	Transposase
ATY42_RS10265	COG2801	Transposase and inactivated derivatives
ATY42_RS10270	COG2963	transposase activity
ATY42_RS10305	COG3039	Transposase
ATY42_RS10315	COG0583	DNA-binding transcription factor activity
ATY42_RS10365	COG2201	protein-glutamate methylesterase activity
ATY42_RS10395	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ATY42_RS10405	COG0531	amino acid
ATY42_RS10410	COG0531	amino acid
ATY42_RS10420	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ATY42_RS10425	COG0277	FAD linked oxidase domain protein
ATY42_RS10490	COG0436	Aminotransferase
ATY42_RS10515	COG1187	pseudouridine synthase activity
ATY42_RS10520	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ATY42_RS10525	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ATY42_RS10530	COG2350	Protein conserved in bacteria
ATY42_RS10560	COG1175	transmembrane transport
ATY42_RS10565	COG0395	ABC-type sugar transport system, permease component
ATY42_RS10590	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATY42_RS10600	COG2957	Belongs to the agmatine deiminase family
ATY42_RS10615	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ATY42_RS10620	COG0539	negative regulation of cytoplasmic translation
ATY42_RS10625	COG0776	regulation of translation
ATY42_RS10635	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ATY42_RS10640	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATY42_RS10650	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ATY42_RS10655	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ATY42_RS10655	COG0475	glutathione-regulated potassium exporter activity
ATY42_RS10690	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ATY42_RS10705	COG3002	Belongs to the UPF0753 family
ATY42_RS10710	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY42_RS10715	COG0583	DNA-binding transcription factor activity
ATY42_RS10730	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS10745	COG0583	DNA-binding transcription factor activity
ATY42_RS10750	COG0583	DNA-binding transcription factor activity
ATY42_RS10765	COG1914	H( )-stimulated, divalent metal cation uptake system
ATY42_RS10785	COG0668	transmembrane transport
ATY42_RS10825	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS10830	COG1183	phosphatidylcholine synthase activity
ATY42_RS10840	COG3243	poly(R)-hydroxyalkanoic acid synthase
ATY42_RS10855	COG0723	plastoquinol--plastocyanin reductase activity
ATY42_RS10855	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY42_RS10865	COG2183	response to ionizing radiation
ATY42_RS10880	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ATY42_RS10895	COG0671	phosphoesterase, PA-phosphatase related
ATY42_RS10920	COG1794	racemase activity, acting on amino acids and derivatives
ATY42_RS10925	COG0697	spore germination
ATY42_RS10930	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ATY42_RS10950	COG1012	belongs to the aldehyde dehydrogenase family
ATY42_RS10985	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ATY42_RS10995	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY42_RS11000	COG0124	histidyl-tRNA synthetase
ATY42_RS11020	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ATY42_RS11035	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ATY42_RS11035	COG0131	Imidazoleglycerol-phosphate dehydratase
ATY42_RS11045	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ATY42_RS11055	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ATY42_RS11055	COG0140	phosphoribosyl-ATP diphosphatase activity
ATY42_RS11200	COG3293	Transposase
ATY42_RS11210	COG3039	Transposase
ATY42_RS11225	COG3293	Transposase
ATY42_RS11255	COG3293	Transposase
ATY42_RS11275	COG2201	protein-glutamate methylesterase activity
ATY42_RS11300	COG3039	Transposase
ATY42_RS11315	COG3328	transposase activity
ATY42_RS11350	COG0322	excinuclease ABC activity
ATY42_RS11360	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATY42_RS11370	COG1663	tetraacyldisaccharide 4'-kinase activity
ATY42_RS11385	COG0811	peptide transport
ATY42_RS11410	COG4591	ABC-type transport system involved in lipoprotein release permease component
ATY42_RS11425	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ATY42_RS11440	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ATY42_RS11450	COG0354	folic acid binding
ATY42_RS11465	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ATY42_RS11475	COG0363	glucosamine-6-phosphate deaminase activity
ATY42_RS11480	COG0129	dihydroxy-acid dehydratase activity
ATY42_RS11485	COG0800	Aldolase
ATY42_RS11520	COG0784	Response regulator, receiver
ATY42_RS11520	COG2205	protein histidine kinase activity
ATY42_RS11520	COG5002	protein histidine kinase activity
ATY42_RS11530	COG3293	Transposase
ATY42_RS11610	COG0386	Belongs to the glutathione peroxidase family
ATY42_RS11695	COG3706	GGDEF domain
ATY42_RS11695	COG5001	Diguanylate cyclase
ATY42_RS11695	COG2203	Gaf domain
ATY42_RS11695	COG4251	negative regulation of phosphorylation
ATY42_RS11710	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY42_RS11740	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ATY42_RS11755	COG0617	tRNA 3'-terminal CCA addition
ATY42_RS11765	COG1469	GTP cyclohydrolase I activity
ATY42_RS11770	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY42_RS11785	COG2963	transposase activity
ATY42_RS11825	COG4566	intracellular signal transduction
ATY42_RS11835	COG2963	transposase activity
ATY42_RS11845	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ATY42_RS11850	COG1605	Chorismate mutase
ATY42_RS11850	COG0077	Prephenate dehydratase
ATY42_RS11860	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ATY42_RS11900	COG1228	amidohydrolase
ATY42_RS11905	COG2986	histidine ammonia-lyase
ATY42_RS11915	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ATY42_RS11935	COG2963	transposase activity
ATY42_RS11945	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ATY42_RS11960	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ATY42_RS11975	COG3115	cell septum assembly
ATY42_RS11985	COG0359	binds to the 23S rRNA
ATY42_RS11995	COG0360	Binds together with S18 to 16S ribosomal RNA
ATY42_RS12000	COG0316	Belongs to the HesB IscA family
ATY42_RS12035	COG0288	reversible hydration of carbon dioxide
ATY42_RS12060	COG2925	Exonuclease
ATY42_RS12070	COG0667	Aldo Keto reductase
ATY42_RS12095	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY42_RS12095	COG0116	Belongs to the methyltransferase superfamily
ATY42_RS12105	COG0488	(ABC) transporter
ATY42_RS12110	COG4133	protoheme IX ABC transporter activity
ATY42_RS12115	COG0488	(ABC) transporter
ATY42_RS12150	COG0494	nUDIX hydrolase
ATY42_RS12160	COG1024	Enoyl-CoA hydratase
ATY42_RS12170	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ATY42_RS12185	COG3039	Transposase
ATY42_RS12200	COG3293	Transposase
ATY42_RS12220	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ATY42_RS12225	COG0573	inorganic phosphate transmembrane transporter activity
ATY42_RS12240	COG0704	Plays a role in the regulation of phosphate uptake
ATY42_RS12250	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ATY42_RS12265	COG3328	transposase activity
ATY42_RS12295	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY42_RS12300	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATY42_RS12305	COG1862	Preprotein translocase
ATY42_RS12310	COG0343	queuine tRNA-ribosyltransferase activity
ATY42_RS12385	COG3293	Transposase
ATY42_RS12400	COG0405	Gamma-glutamyltransferase
ATY42_RS12405	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ATY42_RS12420	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ATY42_RS12425	COG0742	ribosomal rna small subunit methyltransferase
ATY42_RS12450	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ATY42_RS12485	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS12490	COG3039	Transposase
ATY42_RS12530	COG0303	'Molybdopterin
ATY42_RS12540	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ATY42_RS12550	COG1426	Protein conserved in bacteria
ATY42_RS12560	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ATY42_RS12575	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATY42_RS12575	COG1024	Enoyl-CoA hydratase
ATY42_RS12580	COG0183	Belongs to the thiolase family
ATY42_RS12585	COG0038	chloride channel
ATY42_RS12605	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ATY42_RS12625	COG1674	ftsk spoiiie
ATY42_RS12630	COG0492	ferredoxin-NADP+ reductase activity
ATY42_RS12660	COG0542	response to heat
ATY42_RS12675	COG0482	sulfurtransferase activity
ATY42_RS12700	COG5001	Diguanylate cyclase
ATY42_RS12705	COG4585	Histidine kinase
ATY42_RS12715	COG5002	protein histidine kinase activity
ATY42_RS12735	COG0835	chemotaxis
ATY42_RS12735	COG0784	Response regulator, receiver
ATY42_RS12745	COG1558	bacterial-type flagellum-dependent cell motility
ATY42_RS12750	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ATY42_RS12760	COG4787	bacterial-type flagellum-dependent cell motility
ATY42_RS12795	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ATY42_RS12800	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ATY42_RS12830	COG2201	protein-glutamate methylesterase activity
ATY42_RS12850	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY42_RS12860	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS12890	COG1677	Flagellar hook-basal body complex protein FliE
ATY42_RS12940	COG3190	flagellar
ATY42_RS12955	COG1684	flagellar biosynthetic protein fliR
ATY42_RS13010	COG0643	Histidine kinase
ATY42_RS13010	COG2198	Histidine kinase
ATY42_RS13010	COG0784	Response regulator, receiver
ATY42_RS13025	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS13040	COG3039	Transposase
ATY42_RS13135	COG3039	Transposase
ATY42_RS13140	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ATY42_RS13145	COG4988	ABC transporter
ATY42_RS13155	COG1271	oxidase subunit
ATY42_RS13160	COG1294	oxidase, subunit
ATY42_RS13185	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ATY42_RS13205	COG0165	Argininosuccinate lyase
ATY42_RS13220	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ATY42_RS13225	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATY42_RS13235	COG0137	argininosuccinate synthase activity
ATY42_RS13240	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ATY42_RS13255	COG2166	iron-sulfur cluster assembly
ATY42_RS13285	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ATY42_RS13295	COG4302	ethanolamine ammonia-lyase activity
ATY42_RS13300	COG3293	Transposase
ATY42_RS13325	COG3039	Transposase
ATY42_RS13335	COG4677	pectinesterase activity
ATY42_RS13370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY42_RS13375	COG0402	S-adenosylhomocysteine deaminase activity
ATY42_RS13390	COG1509	lysine 2,3-aminomutase activity
ATY42_RS13395	COG5001	Diguanylate cyclase
ATY42_RS13395	COG3300	MHYT domain
ATY42_RS13410	COG0483	inositol monophosphate 1-phosphatase activity
ATY42_RS13415	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY42_RS13440	COG0488	(ABC) transporter
ATY42_RS13445	COG0513	Belongs to the DEAD box helicase family
ATY42_RS13465	COG0625	glutathione transferase activity
ATY42_RS13475	COG1671	Belongs to the UPF0178 family
ATY42_RS13480	COG4681	YaeQ
ATY42_RS13485	COG2081	HI0933 family
ATY42_RS13505	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS13525	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ATY42_RS13530	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATY42_RS13535	COG0802	atpase or kinase
ATY42_RS13540	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ATY42_RS13540	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ATY42_RS13545	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY42_RS13555	COG3293	Transposase
ATY42_RS13575	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY42_RS13630	COG3328	transposase activity
ATY42_RS13660	COG2969	positive regulation of protein catabolic process
ATY42_RS13665	COG0625	glutathione transferase activity
ATY42_RS13670	COG2857	Cytochrome c1
ATY42_RS13675	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ATY42_RS13680	COG0723	plastoquinol--plastocyanin reductase activity
ATY42_RS13685	COG0741	lytic transglycosylase activity
ATY42_RS13715	COG1702	phosphate starvation-inducible protein PhoH
ATY42_RS13735	COG4535	Mg2 and Co2 transporter CorC
ATY42_RS13750	COG1012	belongs to the aldehyde dehydrogenase family
ATY42_RS13760	COG1177	transmembrane transport
ATY42_RS13765	COG1176	ABC-type spermidine putrescine transport system, permease component I
ATY42_RS13770	COG3842	ATPase activity
ATY42_RS13805	COG0174	glutamine synthetase
ATY42_RS13810	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY42_RS13820	COG0477	Major facilitator Superfamily
ATY42_RS13830	COG0243	molybdopterin cofactor binding
ATY42_RS13840	COG2223	nitrite transmembrane transporter activity
ATY42_RS13850	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ATY42_RS13855	COG1121	(ABC) transporter
ATY42_RS13865	COG2733	membrane
ATY42_RS13870	COG5002	protein histidine kinase activity
ATY42_RS13870	COG2205	protein histidine kinase activity
ATY42_RS13870	COG0784	Response regulator, receiver
ATY42_RS13880	COG3039	Transposase
ATY42_RS13885	COG2902	Dehydrogenase
ATY42_RS13895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY42_RS13900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY42_RS13920	COG1609	Transcriptional regulator
ATY42_RS13925	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATY42_RS13925	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATY42_RS13930	COG1105	Belongs to the carbohydrate kinase PfkB family
ATY42_RS13935	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY42_RS13935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATY42_RS13950	COG3039	Transposase
ATY42_RS14075	COG3039	Transposase
ATY42_RS14105	COG4771	TonB-dependent receptor
ATY42_RS14115	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATY42_RS14135	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ATY42_RS14140	COG1360	Flagellar Motor Protein
ATY42_RS14150	COG0835	chemotaxis
ATY42_RS14160	COG0745	RESPONSE REGULATOR receiver
ATY42_RS14190	COG0840	transmembrane signaling receptor activity
ATY42_RS14200	COG0840	transmembrane signaling receptor activity
ATY42_RS14210	COG0840	transmembrane signaling receptor activity
ATY42_RS14215	COG0840	transmembrane signaling receptor activity
ATY42_RS14220	COG0840	transmembrane signaling receptor activity
ATY42_RS14225	COG0840	transmembrane signaling receptor activity
ATY42_RS14240	COG0835	chemotaxis
ATY42_RS14260	COG0840	transmembrane signaling receptor activity
ATY42_RS14290	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATY42_RS14320	COG0318	PFAM AMP-dependent synthetase and ligase
ATY42_RS14325	COG1024	Enoyl-CoA hydratase
ATY42_RS14330	COG0784	Response regulator, receiver
ATY42_RS14330	COG2198	Histidine kinase
ATY42_RS14330	COG2205	protein histidine kinase activity
ATY42_RS14350	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATY42_RS14380	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ATY42_RS14390	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY42_RS14395	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ATY42_RS14405	COG0505	Belongs to the CarA family
ATY42_RS14410	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ATY42_RS14420	COG3293	Transposase
ATY42_RS14425	COG2258	MOSC domain
ATY42_RS14430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATY42_RS14480	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ATY42_RS14495	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS14505	COG0477	Major facilitator Superfamily
ATY42_RS14515	COG1070	Carbohydrate kinase
ATY42_RS14530	COG1501	Belongs to the glycosyl hydrolase 31 family
ATY42_RS14545	COG0800	Aldolase
ATY42_RS14550	COG4948	Mandelate Racemase Muconate Lactonizing
ATY42_RS14560	COG3734	2-keto-3-deoxy-galactonokinase
ATY42_RS14565	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ATY42_RS14575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY42_RS14590	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ATY42_RS14595	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ATY42_RS14605	COG0351	phosphomethylpyrimidine kinase
ATY42_RS14635	COG0583	DNA-binding transcription factor activity
ATY42_RS14640	COG1741	Belongs to the pirin family
ATY42_RS14660	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ATY42_RS14665	COG0305	Participates in initiation and elongation during chromosome replication
ATY42_RS14685	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ATY42_RS14690	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ATY42_RS14695	COG2137	regulation of response to DNA damage stimulus
ATY42_RS14700	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ATY42_RS14715	COG1546	Belongs to the CinA family
ATY42_RS14720	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ATY42_RS14735	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ATY42_RS14745	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ATY42_RS14750	COG1534	Rna-binding protein
ATY42_RS14765	COG1238	metal cluster binding
ATY42_RS14770	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATY42_RS14775	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ATY42_RS14780	COG2840	Smr protein MutS2
ATY42_RS14790	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ATY42_RS14805	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ATY42_RS14810	COG0148	phosphopyruvate hydratase activity
ATY42_RS14820	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ATY42_RS14825	COG0504	CTP synthase activity
ATY42_RS14850	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ATY42_RS14855	COG0306	phosphate transporter
ATY42_RS14865	COG1253	flavin adenine dinucleotide binding
ATY42_RS14880	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATY42_RS14890	COG0477	Major facilitator Superfamily
ATY42_RS14900	COG1132	(ABC) transporter
ATY42_RS14905	COG1136	(ABC) transporter
ATY42_RS14925	COG0438	transferase activity, transferring glycosyl groups
ATY42_RS14935	COG2264	protein methyltransferase activity
ATY42_RS14965	COG2244	polysaccharide biosynthetic process
ATY42_RS15015	COG1595	DNA-templated transcription, initiation
ATY42_RS15030	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATY42_RS15050	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY42_RS15115	COG2201	protein-glutamate methylesterase activity
ATY42_RS15130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY42_RS15135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY42_RS15165	COG2963	transposase activity
ATY42_RS15180	COG4644	lycopene metabolic process
ATY42_RS15190	COG1858	cytochrome C peroxidase
ATY42_RS15230	COG0515	serine threonine protein kinase
ATY42_RS15235	COG0631	protein serine/threonine phosphatase activity
ATY42_RS15280	COG3039	Transposase
ATY42_RS15335	COG3039	Transposase
ATY42_RS15350	COG3039	Transposase
ATY42_RS15380	COG2801	Transposase and inactivated derivatives
ATY42_RS15390	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ATY42_RS15390	COG0316	Belongs to the HesB IscA family
ATY42_RS15395	COG2154	pterin-4-alpha-carbinolamine dehydratase
ATY42_RS15420	COG1530	ribonuclease E activity
ATY42_RS15430	COG3293	Transposase
ATY42_RS15440	COG1054	Belongs to the UPF0176 family
ATY42_RS15445	COG3039	Transposase
ATY42_RS15465	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATY42_RS15505	COG3039	Transposase
ATY42_RS15545	COG1648	precorrin-2 dehydrogenase activity
ATY42_RS15545	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ATY42_RS15570	COG0746	molybdenum cofactor guanylyltransferase activity
ATY42_RS15635	COG4206	TonB-dependent receptor
ATY42_RS15665	COG4206	TonB-dependent receptor
ATY42_RS15715	COG0531	amino acid
ATY42_RS15730	COG0006	proline dipeptidase activity
ATY42_RS15740	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATY42_RS15755	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY42_RS15760	COG3938	Belongs to the proline racemase family
ATY42_RS15770	COG0552	protein localization to endoplasmic reticulum
ATY42_RS15795	COG4191	Histidine kinase
ATY42_RS15795	COG0784	Response regulator, receiver
ATY42_RS15820	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATY42_RS15925	COG0438	transferase activity, transferring glycosyl groups
ATY42_RS15935	COG0438	transferase activity, transferring glycosyl groups
ATY42_RS15940	COG0438	transferase activity, transferring glycosyl groups
ATY42_RS16010	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ATY42_RS16025	COG2963	transposase activity
ATY42_RS16045	COG0556	nucleotide-excision repair
ATY42_RS16050	COG4969	Belongs to the N-Me-Phe pilin family
ATY42_RS16090	COG1611	Belongs to the LOG family
ATY42_RS16105	COG2095	MarC family integral membrane protein
ATY42_RS16115	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ATY42_RS16150	COG1185	polyribonucleotide nucleotidyltransferase activity
ATY42_RS16155	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ATY42_RS16175	COG0195	Participates in both transcription termination and antitermination
ATY42_RS16180	COG0779	Required for maturation of 30S ribosomal subunits
ATY42_RS16190	COG1007	ATP synthesis coupled electron transport
ATY42_RS16220	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ATY42_RS16225	COG1034	ATP synthesis coupled electron transport
ATY42_RS16230	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ATY42_RS16235	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ATY42_RS16240	COG0649	NAD binding
ATY42_RS16245	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY42_RS16255	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATY42_RS16270	COG0149	triose-phosphate isomerase activity
ATY42_RS16295	COG3293	Transposase
ATY42_RS16325	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATY42_RS16330	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ATY42_RS16355	COG0135	phosphoribosylanthranilate isomerase activity
ATY42_RS16360	COG0101	tRNA pseudouridine synthase activity
ATY42_RS16380	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ATY42_RS16385	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATY42_RS16390	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ATY42_RS16395	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY42_RS16420	COG0433	COG0433 Predicted ATPase
ATY42_RS16425	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS16440	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY42_RS16450	COG0412	Dienelactone hydrolase
ATY42_RS16465	COG0717	Belongs to the dCTP deaminase family
ATY42_RS16470	COG0489	protein tyrosine kinase activity
ATY42_RS16505	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATY42_RS16510	COG2311	Membrane
ATY42_RS16515	COG1047	Peptidyl-prolyl cis-trans
ATY42_RS16520	COG0791	NLP P60 protein
ATY42_RS16525	COG0791	NLP P60 protein
ATY42_RS16540	COG1301	dicarboxylic acid transport
ATY42_RS16545	COG1785	Belongs to the alkaline phosphatase family
ATY42_RS16550	COG0037	tRNA processing
ATY42_RS16555	COG1722	exodeoxyribonuclease VII activity
ATY42_RS16560	COG0142	geranyltranstransferase activity
ATY42_RS16580	COG0312	modulator of DNA gyrase
ATY42_RS16585	COG3028	Belongs to the UPF0307 family
ATY42_RS16590	COG0312	modulator of DNA gyrase
ATY42_RS16600	COG3164	Protein of unknown function
ATY42_RS16615	COG2968	Membrane
ATY42_RS16640	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ATY42_RS16665	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ATY42_RS16690	COG3118	belongs to the thioredoxin family
ATY42_RS16705	COG3293	Transposase
ATY42_RS16755	COG3293	Transposase
ATY42_RS16770	COG3039	Transposase
ATY42_RS16775	COG3039	Transposase
ATY42_RS16805	COG3293	Transposase
ATY42_RS16810	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS16835	COG2801	Transposase and inactivated derivatives
ATY42_RS16845	COG2963	transposase activity
ATY42_RS16880	COG2022	thiamine diphosphate biosynthetic process
ATY42_RS16890	COG0471	metal ion transport
ATY42_RS16890	COG3273	potassium ion transport
ATY42_RS16920	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS16930	COG1970	mechanosensitive ion channel activity
ATY42_RS16945	COG3293	Transposase
ATY42_RS16955	COG2272	Belongs to the type-B carboxylesterase lipase family
ATY42_RS16960	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATY42_RS16990	COG0308	aminopeptidase N
ATY42_RS16995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY42_RS17005	COG0529	Catalyzes the synthesis of activated sulfate
ATY42_RS17005	COG2895	sulfate adenylyltransferase (ATP) activity
ATY42_RS17010	COG0175	sulfate reduction
ATY42_RS17015	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ATY42_RS17020	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ATY42_RS17025	COG0175	sulfate reduction
ATY42_RS17045	COG0784	Response regulator, receiver
ATY42_RS17045	COG2205	protein histidine kinase activity
ATY42_RS17045	COG2198	Histidine kinase
ATY42_RS17095	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ATY42_RS17100	COG3588	fructose-bisphosphate aldolase
ATY42_RS17105	COG0469	pyruvate kinase activity
ATY42_RS17145	COG0753	catalase activity
ATY42_RS17165	COG3039	Transposase
ATY42_RS17185	COG2207	Transcriptional regulator
ATY42_RS17185	COG1917	Cupin 2, conserved barrel domain protein
ATY42_RS17220	COG1506	peptidase
ATY42_RS17220	COG0823	Involved in the tonB-independent uptake of proteins
ATY42_RS17245	COG3039	Transposase
ATY42_RS17250	COG1297	OPT oligopeptide transporter protein
ATY42_RS17350	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ATY42_RS17365	COG0732	type I restriction modification DNA specificity domain
ATY42_RS17370	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
ATY42_RS17375	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ATY42_RS17395	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
ATY42_RS17570	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY42_RS17630	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY42_RS17635	COG3039	Transposase
ATY42_RS17640	COG3039	Transposase
ATY42_RS17650	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY42_RS17710	COG2963	transposase activity
ATY42_RS17740	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ATY42_RS17765	COG2197	response regulator
ATY42_RS17770	COG4585	Histidine kinase
ATY42_RS17785	COG2894	cell division
ATY42_RS17790	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ATY42_RS17800	COG0642	Histidine kinase
ATY42_RS17805	COG0745	RESPONSE REGULATOR receiver
ATY42_RS17810	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ATY42_RS17820	COG2194	sulfuric ester hydrolase activity
ATY42_RS17850	COG3551	Protein conserved in bacteria
ATY42_RS17895	COG2963	transposase activity
ATY42_RS17905	COG3293	Transposase
ATY42_RS17920	COG0203	ribosomal protein L17
ATY42_RS17930	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ATY42_RS17935	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ATY42_RS17945	COG0201	protein transport
ATY42_RS17955	COG1841	ribosomal large subunit assembly
ATY42_RS17985	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ATY42_RS17995	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ATY42_RS18000	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ATY42_RS18005	COG0255	Belongs to the universal ribosomal protein uL29 family
ATY42_RS18010	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ATY42_RS18035	COG0089	rRNA binding
ATY42_RS18040	COG0088	Forms part of the polypeptide exit tunnel
ATY42_RS18045	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ATY42_RS18050	COG0051	transcription antitermination factor activity, RNA binding
ATY42_RS18065	COG0049	tRNA binding
ATY42_RS18070	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ATY42_RS18075	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ATY42_RS18080	COG0085	RNA polymerase activity
ATY42_RS18085	COG0222	ribosome binding
ATY42_RS18090	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ATY42_RS18100	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ATY42_RS18105	COG0250	Participates in transcription elongation, termination and antitermination
ATY42_RS18110	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ATY42_RS18140	COG0012	GTP binding
ATY42_RS18145	COG0193	aminoacyl-tRNA hydrolase activity
ATY42_RS18155	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ATY42_RS18170	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ATY42_RS18185	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATY42_RS18195	COG0521	Mo-molybdopterin cofactor biosynthetic process
ATY42_RS18215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATY42_RS18220	COG1295	ribonuclease BN
ATY42_RS18250	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ATY42_RS18260	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ATY42_RS18290	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ATY42_RS18315	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ATY42_RS18330	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY42_RS18330	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATY42_RS18375	COG2890	protein-(glutamine-N5) methyltransferase activity
ATY42_RS18385	COG3634	alkyl hydroperoxide reductase activity
ATY42_RS18390	COG0583	DNA-binding transcription factor activity
ATY42_RS18395	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATY42_RS18400	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATY42_RS18460	COG4783	chaperone-mediated protein folding
ATY42_RS18475	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ATY42_RS18485	COG0438	transferase activity, transferring glycosyl groups
ATY42_RS18490	COG0671	phosphoesterase, PA-phosphatase related
ATY42_RS18495	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATY42_RS18510	COG2833	Protein of unknown function (DUF455)
ATY42_RS18530	COG0285	dihydrofolate synthase activity
ATY42_RS18540	COG0406	alpha-ribazole phosphatase activity
ATY42_RS18570	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ATY42_RS18575	COG4208	sulfate ABC transporter
ATY42_RS18580	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ATY42_RS18585	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ATY42_RS18590	COG0156	8-amino-7-oxononanoate synthase activity
ATY42_RS18615	COG0604	alcohol dehydrogenase
ATY42_RS18620	COG1902	pentaerythritol trinitrate reductase activity
ATY42_RS18620	COG0446	pyridine nucleotide-disulphide oxidoreductase
ATY42_RS18630	COG2963	transposase activity
ATY42_RS18695	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS18705	COG3293	Transposase
ATY42_RS18755	COG3386	PFAM SMP-30 Gluconolaconase
ATY42_RS18775	COG1024	Enoyl-CoA hydratase
ATY42_RS18785	COG0318	PFAM AMP-dependent synthetase and ligase
ATY42_RS18790	COG0583	DNA-binding transcription factor activity
ATY42_RS18830	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY42_RS18835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ATY42_RS18845	COG2096	Adenosyltransferase
ATY42_RS18850	COG0123	including yeast histone deacetylase and acetoin utilization protein
ATY42_RS18865	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ATY42_RS18875	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ATY42_RS18880	COG2967	ApaG domain
ATY42_RS18905	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ATY42_RS18925	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ATY42_RS18940	COG0642	Histidine kinase
ATY42_RS18955	COG4181	ATPase activity
ATY42_RS18965	COG2175	clavaminate synthase activity
ATY42_RS18975	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ATY42_RS19015	COG0667	Aldo Keto reductase
ATY42_RS19025	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ATY42_RS19030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY42_RS19045	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ATY42_RS19050	COG4106	trans-aconitate 2-methyltransferase activity
ATY42_RS19060	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ATY42_RS19070	COG3293	Transposase
ATY42_RS19110	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ATY42_RS19115	COG2226	methyltransferase
ATY42_RS19170	COG0604	alcohol dehydrogenase
ATY42_RS19170	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS19170	COG3321	synthase
ATY42_RS19180	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ATY42_RS19200	COG0494	nUDIX hydrolase
ATY42_RS19215	COG4942	peptidase
ATY42_RS19215	COG1388	LysM domain
ATY42_RS19225	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ATY42_RS19240	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ATY42_RS19245	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATY42_RS19250	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATY42_RS19270	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ATY42_RS19285	COG3116	cell division
ATY42_RS19290	COG0275	rRNA processing
ATY42_RS19325	COG0792	nuclease activity
ATY42_RS19330	COG1988	membrane-bound metal-dependent
ATY42_RS19335	COG0277	FAD linked oxidase domain protein
ATY42_RS19340	COG0745	RESPONSE REGULATOR receiver
ATY42_RS19345	COG2205	protein histidine kinase activity
ATY42_RS19355	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ATY42_RS19360	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ATY42_RS19385	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ATY42_RS19390	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATY42_RS19395	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ATY42_RS19415	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY42_RS19415	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATY42_RS19435	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ATY42_RS19455	COG0488	(ABC) transporter
ATY42_RS19480	COG3791	Glutathione-dependent formaldehyde-activating
ATY42_RS19505	COG2205	protein histidine kinase activity
ATY42_RS19555	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ATY42_RS19580	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ATY42_RS19590	COG2963	transposase activity
ATY42_RS19595	COG3039	Transposase
ATY42_RS19600	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATY42_RS19605	COG3293	Transposase
ATY42_RS19615	COG3039	Transposase
ATY42_RS19655	COG3039	Transposase
ATY42_RS19665	COG3293	Transposase
ATY42_RS19705	COG1649	PFAM Uncharacterised BCR, COG1649
ATY42_RS19705	COG0726	polysaccharide deacetylase
ATY42_RS19710	COG1215	transferase activity, transferring glycosyl groups
ATY42_RS19720	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ATY42_RS19725	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATY42_RS19730	COG1609	Transcriptional regulator
ATY42_RS19740	COG2188	Transcriptional regulator
ATY42_RS19755	COG3250	beta-galactosidase activity
ATY42_RS19790	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ATY42_RS19795	COG4191	Histidine kinase
ATY42_RS19800	COG0784	Response regulator, receiver
ATY42_RS19805	COG4251	negative regulation of phosphorylation
ATY42_RS19810	COG2823	Periplasmic or secreted lipoprotein
ATY42_RS19815	COG0673	inositol 2-dehydrogenase activity
ATY42_RS19820	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ATY42_RS19860	COG1051	belongs to the nudix hydrolase family
ATY42_RS19860	COG1056	cytidyltransferase-related domain
ATY42_RS19885	COG2921	Belongs to the UPF0250 family
ATY42_RS19895	COG1686	Belongs to the peptidase S11 family
ATY42_RS19905	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ATY42_RS19910	COG2951	lytic endotransglycosylase activity
ATY42_RS19945	COG0772	Belongs to the SEDS family
ATY42_RS19960	COG1792	Involved in formation and maintenance of cell shape
ATY42_RS19965	COG1077	Cell shape determining protein MreB Mrl
ATY42_RS19970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATY42_RS20020	COG2199	diguanylate cyclase activity
ATY42_RS20025	COG0308	aminopeptidase N
ATY42_RS20055	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ATY42_RS20085	COG0436	Aminotransferase
ATY42_RS20100	COG1505	serine-type exopeptidase activity
ATY42_RS20125	COG0181	hydroxymethylbilane synthase activity
ATY42_RS20135	COG3275	phosphorelay sensor kinase activity
ATY42_RS20170	COG0659	secondary active sulfate transmembrane transporter activity
ATY42_RS20175	COG5297	Belongs to the glycosyl hydrolase family 6
ATY42_RS20175	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATY42_RS20185	COG0840	transmembrane signaling receptor activity
ATY42_RS20220	COG3293	Transposase
ATY42_RS20255	COG0598	Magnesium transport protein CorA
ATY42_RS20265	COG1113	amino acid transport
ATY42_RS20270	COG5297	Belongs to the glycosyl hydrolase family 6
ATY42_RS20275	COG4305	rare lipoprotein A
ATY42_RS20280	COG0697	spore germination
ATY42_RS20350	COG4221	oxidoreductase activity
ATY42_RS20365	COG2963	transposase activity
ATY42_RS20385	COG0456	acetyltransferase
ATY42_RS20395	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ATY42_RS20425	COG3227	Zinc metalloprotease (Elastase)
ATY42_RS20440	COG2111	Na H antiporter
ATY42_RS20440	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATY42_RS20445	COG1006	Multisubunit Na H antiporter MnhC subunit
ATY42_RS20450	COG0651	ATP synthesis coupled electron transport
ATY42_RS20460	COG2212	antiporter activity
ATY42_RS20465	COG1320	monovalent cation:proton antiporter activity
ATY42_RS20470	COG3039	Transposase
ATY42_RS20475	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ATY42_RS20495	COG3104	oligopeptide transport
ATY42_RS20500	COG3483	tryptophan 2,3-dioxygenase activity
ATY42_RS20505	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ATY42_RS20520	COG0022	dehydrogenase e1 component
ATY42_RS20535	COG3293	Transposase
ATY42_RS20545	COG0183	Belongs to the thiolase family
ATY42_RS20595	COG3039	Transposase
ATY42_RS20625	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ATY42_RS20630	COG3023	N-Acetylmuramoyl-L-alanine amidase
ATY42_RS20640	COG4948	Mandelate Racemase Muconate Lactonizing
ATY42_RS20670	COG3293	Transposase
ATY42_RS20680	COG0531	amino acid
ATY42_RS20695	COG3293	Transposase
ATY42_RS20715	COG4682	membrane
ATY42_RS20720	COG2133	pyrroloquinoline quinone binding
ATY42_RS20750	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS20760	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ATY42_RS20765	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ATY42_RS20775	COG1610	YqeY-like protein
ATY42_RS20785	COG1295	ribonuclease BN
ATY42_RS20790	COG0358	DNA primase activity
ATY42_RS20855	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
ATY42_RS20865	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ATY42_RS20880	COG2963	transposase activity
ATY42_RS20920	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ATY42_RS20925	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ATY42_RS20930	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ATY42_RS20940	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ATY42_RS20945	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATY42_RS20960	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ATY42_RS20985	COG2963	transposase activity
ATY42_RS20990	COG2801	Transposase and inactivated derivatives
ATY42_RS21045	COG3039	Transposase
ATY42_RS21065	COG3328	transposase activity
ATY42_RS21070	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY42_RS21070	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ATY42_RS21080	COG1473	amidohydrolase
ATY42_RS21085	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATY42_RS21090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ATY42_RS21100	COG5383	Protein conserved in bacteria
ATY42_RS21130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATY42_RS21135	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ATY42_RS21150	COG0028	Belongs to the TPP enzyme family
ATY42_RS21155	COG4191	Histidine kinase
ATY42_RS21180	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ATY42_RS21195	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATY42_RS21200	COG3177	Filamentation induced by cAMP protein fic
ATY42_RS21215	COG0596	Alpha beta hydrolase
ATY42_RS21220	COG0727	PFAM Uncharacterised protein family (UPF0153)
ATY42_RS21225	COG0318	PFAM AMP-dependent synthetase and ligase
ATY42_RS21230	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATY42_RS21260	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ATY42_RS21270	COG0129	dihydroxy-acid dehydratase activity
ATY42_RS21295	COG3039	Transposase
ATY42_RS21305	COG0408	coproporphyrinogen oxidase activity
ATY42_RS21320	COG2801	Transposase and inactivated derivatives
ATY42_RS21325	COG2963	transposase activity
ATY42_RS21410	COG2353	YceI-like domain
ATY42_RS21445	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ATY42_RS21460	COG3386	PFAM SMP-30 Gluconolaconase
ATY42_RS21505	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ATY42_RS21520	COG4771	TonB-dependent receptor
ATY42_RS21530	COG0459	protein refolding
ATY42_RS21560	COG1252	NADH dehydrogenase
ATY42_RS21570	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATY42_RS21575	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ATY42_RS21580	COG2201	protein-glutamate methylesterase activity
ATY42_RS21585	COG2177	Part of the ABC transporter FtsEX involved in
ATY42_RS21590	COG2884	Cell division ATP-binding protein ftsE
ATY42_RS21600	COG3118	belongs to the thioredoxin family
ATY42_RS21605	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ATY42_RS21625	COG0729	surface antigen
ATY42_RS21630	COG2911	Protein conserved in bacteria
ATY42_RS21665	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATY42_RS21680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATY42_RS21735	COG1733	regulation of RNA biosynthetic process
ATY42_RS21740	COG0702	epimerase
ATY42_RS21770	COG0583	DNA-binding transcription factor activity
ATY42_RS21775	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATY42_RS21790	COG2205	protein histidine kinase activity
ATY42_RS21795	COG2205	protein histidine kinase activity
ATY42_RS21800	COG0745	RESPONSE REGULATOR receiver
ATY42_RS21830	COG1902	pentaerythritol trinitrate reductase activity
ATY42_RS21835	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ATY42_RS21845	COG2814	Major facilitator Superfamily
ATY42_RS21850	COG0583	DNA-binding transcription factor activity
ATY42_RS21865	COG0084	hydrolase, TatD family'
ATY42_RS21900	COG3293	Transposase
ATY42_RS21920	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ATY42_RS21940	COG2351	hydroxyisourate hydrolase activity
ATY42_RS21980	COG2826	transposase and inactivated derivatives, IS30 family
ATY42_RS21990	COG4770	biotin carboxylase activity
ATY42_RS21995	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ATY42_RS22000	COG1960	acyl-CoA dehydrogenase activity
ATY42_RS22060	COG0523	cobalamin synthesis protein
ATY42_RS22070	COG0697	spore germination
ATY42_RS22080	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ATY42_RS22095	COG4771	TonB-dependent receptor
ATY42_RS22100	COG0457	Tetratricopeptide repeat
ATY42_RS22115	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ATY42_RS22130	COG0519	Catalyzes the synthesis of GMP from XMP
ATY42_RS22130	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ATY42_RS22140	COG0805	protein transport
ATY42_RS22150	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATY42_RS22160	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATY42_RS22205	COG3661	Belongs to the glycosyl hydrolase 67 family
ATY42_RS22215	COG4948	Mandelate Racemase Muconate Lactonizing
ATY42_RS22225	COG1472	Belongs to the glycosyl hydrolase 3 family
ATY42_RS22230	COG0246	Mannitol dehydrogenase
ATY42_RS22255	COG3693	PFAM glycoside hydrolase, family 10
ATY42_RS22260	COG3693	PFAM glycoside hydrolase, family 10
ATY42_RS22280	COG2211	Major facilitator Superfamily
ATY42_RS22315	COG3293	Transposase
ATY42_RS22325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ATY42_RS22375	COG1846	Transcriptional regulator
ATY42_RS22380	COG1764	response to oxidative stress
ATY42_RS22465	COG3549	Plasmid maintenance system killer
ATY42_RS22475	COG1074	ATP-dependent DNA helicase activity
ATY42_RS22480	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ATY42_RS22520	COG2032	superoxide dismutase activity
ATY42_RS22525	COG2032	superoxide dismutase activity
ATY42_RS22530	COG2204	response regulator
ATY42_RS22535	COG3852	Histidine kinase
ATY42_RS22540	COG0004	ammonium transporteR
ATY42_RS22545	COG0347	Belongs to the P(II) protein family
ATY42_RS22550	COG0174	glutamine synthetase
ATY42_RS22555	COG1968	undecaprenyl-diphosphatase activity
ATY42_RS22600	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY42_RS22610	COG2062	phosphohistidine phosphatase, SixA
ATY42_RS22615	COG0489	protein tyrosine kinase activity
ATY42_RS22635	COG1396	sequence-specific DNA binding
ATY42_RS22640	COG3550	peptidyl-serine autophosphorylation
ATY42_RS22645	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ATY42_RS22650	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATY42_RS22665	COG1125	glycine betaine transport
ATY42_RS22665	COG0517	IMP dehydrogenase activity
ATY42_RS22680	COG1119	ATPase activity
ATY42_RS22690	COG1752	Esterase of the alpha-beta hydrolase superfamily
ATY42_RS22705	COG3039	Transposase
ATY42_RS22715	COG2963	transposase activity
ATY42_RS22730	COG0656	L-ascorbic acid biosynthetic process
ATY42_RS22735	COG2130	NADP-dependent
ATY42_RS22740	COG0667	Aldo Keto reductase
ATY42_RS22750	COG1187	pseudouridine synthase activity
ATY42_RS22765	COG1643	Atp-dependent helicase
ATY42_RS22770	COG4807	Protein conserved in bacteria
ATY42_RS22775	COG4948	Mandelate Racemase Muconate Lactonizing
ATY42_RS22780	COG0179	Fumarylacetoacetate (FAA) hydrolase
ATY42_RS22785	COG1028	Short-chain dehydrogenase reductase Sdr
ATY42_RS22805	COG3507	Belongs to the glycosyl hydrolase 43 family
ATY42_RS22850	COG3162	membrane
ATY42_RS22855	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATY42_RS22870	COG0708	Exodeoxyribonuclease III
ATY42_RS22885	COG2091	lysine biosynthetic process via aminoadipic acid
ATY42_RS22895	COG3540	Alkaline phosphatase
ATY42_RS22925	COG2159	amidohydrolase
ATY42_RS22935	COG2159	amidohydrolase
ATY42_RS22945	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ATY42_RS22950	COG0583	DNA-binding transcription factor activity
ATY42_RS22955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATY42_RS22970	COG0210	DNA helicase
ATY42_RS22985	COG0531	amino acid
ATY42_RS22990	COG1322	Protein conserved in bacteria
ATY42_RS23000	COG0386	Belongs to the glutathione peroxidase family
ATY42_RS23060	COG0793	Belongs to the peptidase S41A family
ATY42_RS23065	COG4942	peptidase
ATY42_RS23075	COG2234	aminopeptidase activity
ATY42_RS23125	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATY42_RS23130	COG0302	gtp cyclohydrolase
ATY42_RS23155	COG0477	Major facilitator Superfamily
ATY42_RS23230	COG1929	Belongs to the glycerate kinase type-1 family
ATY42_RS23235	COG2271	Major facilitator Superfamily
ATY42_RS23250	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ATY42_RS23255	COG0861	Integral membrane protein TerC family
ATY42_RS23265	COG0584	glycerophosphoryl diester phosphodiesterase
ATY42_RS23275	COG0671	phosphoesterase, PA-phosphatase related
ATY42_RS23285	COG0726	polysaccharide deacetylase